View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14559_high_5 (Length: 270)
Name: NF14559_high_5
Description: NF14559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14559_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 260
Target Start/End: Original strand, 33747164 - 33747405
Alignment:
| Q |
17 |
acaaaacaccaacaattggaaattattactataagcataagctgagctgtacatctccattccctttttaagctaaaagcgacaaaataacttctaactc |
116 |
Q |
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| T |
33747164 |
acaaaacaccaacaattggaaattattactataagcataagctgagttgtacatctccattccctttt-aagctgaaagcgacaaaataacttctaactc |
33747262 |
T |
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| Q |
117 |
accattgacagattggcatacacatcctgtcccaacacaaacctattttatttcctgaactccaatccatagaaattctttctacaaccttatcaacttc |
216 |
Q |
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|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33747263 |
tccat-gacagattggcatacacatcctgtcgcaacacaaacctattttatttcctgaactccaatccatagaaattctttctacaaccttatcaacttc |
33747361 |
T |
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| Q |
217 |
taaatcattgcctatggagcattataaaatgaaaataagtataa |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33747362 |
taaatcattgcctatggagcattataaaatgaaaataagtataa |
33747405 |
T |
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