View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14559_low_11 (Length: 215)

Name: NF14559_low_11
Description: NF14559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14559_low_11
NF14559_low_11
[»] chr5 (17 HSPs)
chr5 (1-212)||(8938768-8938979)
chr5 (50-211)||(22903000-22903159)
chr5 (83-201)||(16621148-16621264)
chr5 (62-211)||(20025202-20025349)
chr5 (47-211)||(27083263-27083424)
chr5 (64-211)||(19993190-19993335)
chr5 (83-206)||(19846009-19846130)
chr5 (62-201)||(26163554-26163691)
chr5 (109-203)||(25537371-25537463)
chr5 (83-212)||(4477138-4477265)
chr5 (108-209)||(25829015-25829114)
chr5 (131-204)||(22865747-22865820)
chr5 (109-197)||(31202467-31202553)
chr5 (124-188)||(26348127-26348191)
chr5 (133-200)||(26994642-26994709)
chr5 (159-211)||(24647302-24647354)
chr5 (131-163)||(30827056-30827088)
[»] chr2 (20 HSPs)
chr2 (61-212)||(45714913-45715062)
chr2 (47-211)||(12168877-12169039)
chr2 (63-211)||(27846544-27846690)
chr2 (62-211)||(19919091-19919238)
chr2 (62-211)||(45258177-45258324)
chr2 (87-214)||(36022405-36022530)
chr2 (64-211)||(12127688-12127833)
chr2 (136-211)||(3586354-3586429)
chr2 (85-192)||(17671915-17672020)
chr2 (126-202)||(20120328-20120404)
chr2 (109-200)||(29710984-29711073)
chr2 (136-208)||(36267489-36267561)
chr2 (136-211)||(18135862-18135937)
chr2 (152-203)||(24499796-24499847)
chr2 (145-211)||(15825154-15825220)
chr2 (84-192)||(17626842-17626948)
chr2 (148-211)||(18770317-18770380)
chr2 (125-210)||(10923191-10923276)
chr2 (131-212)||(12634832-12634913)
chr2 (139-179)||(31013553-31013593)
[»] chr1 (23 HSPs)
chr1 (62-211)||(33101532-33101679)
chr1 (62-211)||(5459734-5459880)
chr1 (81-211)||(34273025-34273153)
chr1 (62-211)||(5671689-5671836)
chr1 (124-209)||(26977719-26977804)
chr1 (75-210)||(43344469-43344601)
chr1 (109-211)||(14255055-14255155)
chr1 (145-212)||(16050394-16050461)
chr1 (136-211)||(25408087-25408162)
chr1 (108-211)||(48637515-48637617)
chr1 (125-211)||(12177366-12177452)
chr1 (75-215)||(18246075-18246213)
chr1 (109-210)||(4601513-4601612)
chr1 (102-211)||(22414734-22414841)
chr1 (108-211)||(16030360-16030461)
chr1 (131-192)||(3590813-3590874)
chr1 (111-211)||(23728845-23728942)
chr1 (131-207)||(2612692-2612768)
chr1 (51-103)||(23280412-23280464)
chr1 (62-180)||(2141000-2141115)
chr1 (139-177)||(30732511-30732549)
chr1 (131-203)||(23280293-23280365)
chr1 (131-199)||(52565566-52565634)
[»] chr4 (17 HSPs)
chr4 (133-211)||(47253265-47253343)
chr4 (111-211)||(12683753-12683851)
chr4 (49-212)||(10981772-10981933)
chr4 (62-211)||(19809621-19809767)
chr4 (125-211)||(15514586-15514672)
chr4 (60-199)||(3981867-3982002)
chr4 (124-203)||(29157081-29157160)
chr4 (130-200)||(13171064-13171134)
chr4 (111-211)||(15742178-15742276)
chr4 (59-125)||(40979169-40979235)
chr4 (128-211)||(14602040-14602123)
chr4 (145-204)||(16012503-16012562)
chr4 (136-192)||(1723952-1724009)
chr4 (131-211)||(5518526-5518606)
chr4 (59-123)||(19818610-19818674)
chr4 (75-215)||(26894742-26894880)
chr4 (173-209)||(19643730-19643766)
[»] chr8 (18 HSPs)
chr8 (62-210)||(23269165-23269311)
chr8 (62-211)||(26916923-26917070)
chr8 (49-211)||(17927729-17927889)
chr8 (62-210)||(1909734-1909880)
chr8 (136-211)||(3459509-3459584)
chr8 (62-212)||(15057955-15058102)
chr8 (125-203)||(18322923-18323001)
chr8 (66-211)||(30477564-30477707)
chr8 (145-211)||(24677612-24677678)
chr8 (136-211)||(13754749-13754824)
chr8 (136-211)||(13764980-13765055)
chr8 (109-198)||(17319657-17319747)
chr8 (153-211)||(21416746-21416804)
chr8 (124-164)||(14666911-14666951)
chr8 (131-211)||(24576608-24576688)
chr8 (152-211)||(6928115-6928174)
chr8 (65-166)||(23497205-23497304)
chr8 (145-202)||(5859815-5859872)
[»] chr7 (19 HSPs)
chr7 (48-203)||(29373351-29373504)
chr7 (59-210)||(13159289-13159439)
chr7 (124-212)||(9573450-9573538)
chr7 (48-211)||(21161147-21161307)
chr7 (136-203)||(7486536-7486603)
chr7 (126-207)||(9135390-9135471)
chr7 (126-211)||(12644766-12644851)
chr7 (100-211)||(16987117-16987226)
chr7 (131-211)||(39879373-39879453)
chr7 (101-203)||(5863145-5863245)
chr7 (136-211)||(9867964-9868039)
chr7 (109-211)||(13292148-13292248)
chr7 (136-211)||(26762936-26763011)
chr7 (126-192)||(5925519-5925585)
chr7 (149-195)||(43172068-43172114)
chr7 (126-211)||(10287621-10287706)
chr7 (124-192)||(18773960-18774028)
chr7 (126-163)||(12265165-12265202)
chr7 (147-211)||(5929036-5929100)
[»] chr6 (29 HSPs)
chr6 (62-212)||(34187218-34187366)
chr6 (124-212)||(9277324-9277412)
chr6 (136-212)||(25008414-25008490)
chr6 (90-212)||(9292043-9292163)
chr6 (140-211)||(19730616-19730687)
chr6 (136-211)||(689882-689957)
chr6 (87-212)||(10926917-10927041)
chr6 (146-211)||(9403173-9403238)
chr6 (139-211)||(16343573-16343645)
chr6 (124-200)||(20148296-20148372)
chr6 (124-200)||(22184456-22184532)
chr6 (91-210)||(15104293-15104406)
chr6 (136-211)||(18147297-18147372)
chr6 (148-211)||(19305467-19305530)
chr6 (109-211)||(22497323-22497423)
chr6 (62-203)||(30680911-30681050)
chr6 (112-211)||(12449608-12449705)
chr6 (131-203)||(31295568-31295640)
chr6 (90-212)||(2907853-2907973)
chr6 (173-211)||(3404887-3404925)
chr6 (151-209)||(10115712-10115770)
chr6 (126-211)||(34064176-34064261)
chr6 (48-96)||(690016-690064)
chr6 (131-211)||(12424339-12424419)
chr6 (62-98)||(14080382-14080418)
chr6 (62-98)||(20148215-20148251)
chr6 (62-98)||(22184577-22184613)
chr6 (155-211)||(23768203-23768259)
chr6 (131-211)||(27860973-27861053)
[»] scaffold0505 (1 HSPs)
scaffold0505 (62-211)||(7804-7951)
[»] scaffold0205 (2 HSPs)
scaffold0205 (124-211)||(10940-11027)
scaffold0205 (136-211)||(22877-22952)
[»] scaffold0140 (1 HSPs)
scaffold0140 (131-211)||(6284-6364)
[»] scaffold0360 (1 HSPs)
scaffold0360 (136-211)||(13913-13988)
[»] chr3 (15 HSPs)
chr3 (148-211)||(17143774-17143837)
chr3 (48-211)||(2311859-2312020)
chr3 (108-203)||(21649378-21649471)
chr3 (136-211)||(12516176-12516251)
chr3 (108-211)||(14860124-14860225)
chr3 (62-203)||(28723807-28723946)
chr3 (136-180)||(8122970-8123014)
chr3 (131-211)||(9801109-9801188)
chr3 (109-204)||(12251954-12252047)
chr3 (144-211)||(21342312-21342379)
chr3 (148-211)||(30606931-30606994)
chr3 (173-211)||(28715513-28715551)
chr3 (136-181)||(9007831-9007876)
chr3 (136-201)||(12108410-12108475)
chr3 (59-96)||(28715621-28715658)
[»] scaffold0022 (1 HSPs)
scaffold0022 (131-212)||(69248-69329)
[»] scaffold0103 (1 HSPs)
scaffold0103 (127-203)||(40778-40854)
[»] scaffold0294 (1 HSPs)
scaffold0294 (153-211)||(268-326)
[»] scaffold0023 (1 HSPs)
scaffold0023 (133-211)||(95835-95913)
[»] scaffold0002 (2 HSPs)
scaffold0002 (111-211)||(379684-379782)
scaffold0002 (151-211)||(121036-121096)
[»] scaffold0005 (1 HSPs)
scaffold0005 (128-211)||(215255-215338)
[»] scaffold0054 (1 HSPs)
scaffold0054 (144-198)||(68838-68892)
[»] scaffold0291 (1 HSPs)
scaffold0291 (151-211)||(15455-15515)
[»] scaffold0092 (1 HSPs)
scaffold0092 (140-211)||(21643-21714)
[»] scaffold0074 (1 HSPs)
scaffold0074 (140-211)||(35248-35319)
[»] scaffold0380 (1 HSPs)
scaffold0380 (111-211)||(6885-6983)
[»] scaffold0174 (1 HSPs)
scaffold0174 (112-180)||(29332-29398)
[»] scaffold0013 (1 HSPs)
scaffold0013 (131-211)||(4449-4529)
[»] scaffold0012 (1 HSPs)
scaffold0012 (139-207)||(149141-149209)


Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8938768 - 8938979
Alignment:
Q  1 tagataaactcaaacgagtcaatccaaacaggatcttaatgtttgttattgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  8938768 tagataaactcaaacgaatcaatccaaacaggatcttaatgtttgttattgatatgttcgatgaggatggatgagaggcaatggtggcggaaagtgctct 8938867  T
Q  101 ggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8938868 ggtacggtggcgatgagtctttgtgcggtagaacgaaaggtgcatgcaggcacgttaacactccaatgctctagtcagtattggaactgagaaagagtgt 8938967  T
Q  201 gtaaaaagtgtg 212  Q
    ||||||||||||    
T  8938968 gtaaaaagtgtg 8938979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 22903000 - 22903159
Alignment:
Q  50 tgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcag 149  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||||   ||||| ||| ||||||| ||||  |||| |||| ||||||    | ||    
T  22903000 tgatctgtccgatgaggatggatgagaggcaacgttggcggaaagtgcttcagtacggtggtgatgagttttcg--cggtggaacgaaaggttttcgtag 22903097  T
Q  150 gcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||| ||||||||| ||| |||| |||||||| |||||||||||||||||||||| |||||||    
T  22903098 gcatgttagcacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgt 22903159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 16621148 - 16621264
Alignment:
Q  83 ggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtatt 182  Q
    |||| |||||| |||| |||||| ||||||||||||||||   |||| |||| ||||||| ||| |||||||||| |||| ||| |||| || || ||||    
T  16621148 ggtgacggaaaatgctttggtacattggcgatgagtcttca--cggtggaacgaaaggtgtatgtaggcacgttaacacttcaacgctcaagccaatatt 16621245  T
Q  183 ggaactgagaaagagtgtg 201  Q
    |||||||||||||||||||    
T  16621246 ggaactgagaaagagtgtg 16621264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 20025202 - 20025349
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||||||||||| | ||||||||| ||||| ||||||| || | ||||||||||  ||||| | || |||||||  ||||  ||||||| |||    
T  20025202 tgaggatggatgagaggcactagtggcggaatgtgctttggtacggtgtcaatgagtcttc--gcggtgggacgaaaggtgtctgcacacacgttaacac 20025299  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||   ||||| | || ||||||||||||||||||| |||||||    
T  20025300 tccaacgctactgtcaggaatgaaactgagaaagagtgtgtagaaagtgt 20025349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 27083424 - 27083263
Alignment:
Q  47 tattgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatg 146  Q
    ||||||||||| || ||||||| |||||||  ||| |||||||||| ||||| |  |||  |||||| ||||||||  |||||||||| ||| |||  ||    
T  27083424 tattgatctgtccggtgaggattgatgagaaacaacggtggcggaatgtgctctattacagtggcgaagagtcttc--gcggtagaacgaaatgtgtctg 27083327  T
Q  147 caggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||| ||||||||||||||||  ||| ||||||||  | ||||| ||||||||||||| |||||||    
T  27083326 cagacacgttagcactccaacactcaagtcagta-agaaactgtgaaagagtgtgtagaaagtgt 27083263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 19993335 - 19993190
Alignment:
Q  64 aggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactc 163  Q
    |||||||| ||||||||| ||||||||||||||||  ||||||  ||   ||||||||||  |||| | | ||||||| | ||||| ||| |||||| ||    
T  19993335 aggatggacgagaggcaacggtggcggaaagtgctccggtacggagggattgagtcttcg--cggtgggaaaaaaggttcttgcagacacattagcagtc 19993238  T
Q  164 caatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| ||| |||||||| |||||||||||||||| ||||  |||||||    
T  19993237 caatactcaagtcagtaatggaactgagaaagagcgtgttgaaagtgt 19993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 19846009 - 19846130
Alignment:
Q  83 ggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtatt 182  Q
    ||||| |||||||||| | ||||| ||||||||| ||| | ||  |  |||| |||||||| ||||| ||| ||||||||| ||  ||| ||||||||||    
T  19846009 ggtggtggaaagtgctctagtacggtggcgatgaatctccatgatg--gaacgaaaggtgcctgcagacacattagcactctaacactcaagtcagtatt 19846106  T
Q  183 ggaactgagaaagagtgtgtaaaa 206  Q
    |||||| |||||||||||| ||||    
T  19846107 ggaactaagaaagagtgtgaaaaa 19846130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 26163554 - 26163691
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||||||| ||||  ||||||||| |||||   ||||  || ||| |||||||  || | | |||| ||||||||||||| |||| |||||||    
T  26163554 tgaggatggatgagacgcaacagtggcggaatgtgctcccgtacaatgacgacgagtctt--tgggatggaacgaaaggtgcatgcatgcacattagcac 26163651  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtg 201  Q
    ||||| |||| |||||| | || |||| ||||||||||||    
T  26163652 tccaacgctcaagtcagaaatgaaactaagaaagagtgtg 26163691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 25537371 - 25537463
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||| |||||||||  |||| |||| |||||||| |||| ||||||||||||||||| |||| ||   ||| ||||||||||||||| ||||||    
T  25537371 ggcgaagagtcttcg--cggtggaacgaaaggtgcctgcaagcacgttagcactccaacgctcaagattgtaatggaactgagaaagattgtgta 25537463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 4477138 - 4477265
Alignment:
Q  83 ggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtatt 182  Q
    ||||| ||||||||||  |||||| ||||||||||||||  |||||| | || || |||||  ||||||||||||  ||||||| |||| |||||||||     
T  4477138 ggtggtggaaagtgctccggtacggtggcgatgagtctt--tgcggtgggacgaagggtgcccgcaggcacgttaatactccaacgctcaagtcagtatg 4477235  T
Q  183 ggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    | || |||||  || ||||| |||||||||    
T  4477236 gtaaatgagatggaatgtgtgaaaagtgtg 4477265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 25829114 - 25829015
Alignment:
Q  108 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    ||||||| ||||||||  |||| |||||||| ||| || |||||||||||||| ||  | |||||||||| || ||||| ||||||| ||||||||| ||    
T  25829114 tggcgataagtcttcg--cggttgaacaaaatgtgtattcaggcacgttagcaatctgacgctctagtcaataatggaattgagaaaaagtgtgtaagaa 25829017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 22865747 - 22865820
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaa 204  Q
    |||| ||||||||||||||| |||||||||||   | |||| ||| |||| ||||||||||||| |||||||||    
T  22865747 gaacgaaaggtgcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaa 22865820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 31202553 - 31202467
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagag 197  Q
    |||||||||||||||  |||| ||||| || |||| | |||| ||||||||| ||| | |||| |||||||||||||||||||| ||||    
T  31202553 ggcgatgagtcttcg--cggtggaacagaaagtgcctacaggaacgttagcattccgacgctcaagtcagtattggaactgagagagag 31202467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 26348191 - 26348127
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaact 188  Q
    |||||| |||| |||||||  |||||||||||||||||||||| |||| ||||| || |||||||    
T  26348191 tgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcattaatggaact 26348127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 26994709 - 26994642
Alignment:
Q  133 acaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    ||||||||||  | ||| |||||||||||||| | |||| |||||||| ||||| |||||||||||||    
T  26994709 acaaaaggtgtcttcagacacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtgt 26994642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 24647302 - 24647354
Alignment:
Q  159 cactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| |||| | |||||| ||||||||| ||||||||||||| ||||||    
T  24647302 cactccaacgctcaattcagtaatggaactgaaaaagagtgtgtaagaagtgt 24647354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 30827056 - 30827088
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactc 163  Q
    |||| ||||||||||||||||||||||||||||    
T  30827056 gaacgaaaggtgcatgcaggcacgttagcactc 30827088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 45714913 - 45715062
Alignment:
Q  61 atgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagca 160  Q
    ||||||||||||||| |||||   ||||||||||||||  ||||| |||||||||||||||| ||  || |||| |||||||||||||||||||||||||    
T  45714913 atgaggatggatgagtggcaacaatggcggaaagtgctccggtacattggcgatgagtcttcctg--gtggaacgaaaggtgcatgcaggcacgttagca 45715010  T
Q  161 ctccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |||||| |||| |||||||| || ||||||||||||||||||||||||||||    
T  45715011 ctccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtg 45715062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 12168877 - 12169039
Alignment:
Q  47 tattgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatg 146  Q
    ||||||| ||| || ||| ||||||||||||||||  |||||||||| ||||  ||||| | |||||| ||||||  |||||| |||| |||||||  ||    
T  12168877 tattgatatgtccggtgaagatggatgagaggcaacagtggcggaaaatgctccggtacct-ggcgataagtctt--tgcggtggaacgaaaggtgtctg 12168973  T
Q  147 caggcacgttagcactccaatgct-ctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||| ||| |||||||| ||| | |||||||| ||||||| |||||||||||||| |||||||    
T  12168974 caggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtgtgtagaaagtgt 12169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 211
Target Start/End: Complemental strand, 27846690 - 27846544
Alignment:
Q  63 gaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcact 162  Q
    |||||||||||||||||||  ||| ||||| ||| |  |||||| |||| |||||||||||  | || | || ||| |||| ||||||||||||||||||    
T  27846690 gaggatggatgagaggcaacagtgacggaatgtgttccggtacggtggcaatgagtcttcg--cagttggacgaaaagtgcctgcaggcacgttagcact 27846593  T
Q  163 ccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| | || |||||||| ||||||||||||| ||| |||| |||||||    
T  27846592 ccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgt 27846544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 19919238 - 19919091
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||| |||||||||||||||||||||| |||||||||  |||| | ||||||| |||||||||  ||| |||| |||||||| |||||| || |||| ||    
T  19919238 tgagaatggatgagaggcaatggtggcagaaagtgctccggtatggtggcgatcagtcttcgt--ggtggaacgaaaggtgcctgcaggaacattagaac 19919141  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    || || ||   ||||| || ||||| ||||||||||| |||| |||||||    
T  19919140 tctaacgccaaagtcaataatggaaatgagaaagagtatgtagaaagtgt 19919091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 45258324 - 45258177
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||||||||||||||||||| ||||  ||||| |||| || || | |||||||||||||||  ||||| |||| |||| ||  ||||||||||||| |||    
T  45258324 tgaggatggatgagaggcaacggtgatggaaaatgctttgatatggtggcgatgagtcttc--gcggtggaacgaaagatgtctgcaggcacgttaacac 45258227  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||| ||| |||| || |||| ||||||| |||||  |||||||    
T  45258226 tccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtgt 45258177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 214
Target Start/End: Original strand, 36022405 - 36022530
Alignment:
Q  87 gcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaa 186  Q
    ||||||||| || || |||| |||| ||||||||| ||   ||||||| ||||||  ||| |||||||||| ||||| || |||| |||||||||||  |    
T  36022405 gcggaaagttctctgatacggtggcaatgagtctttgta--gtagaacgaaaggtatatgtaggcacgttaacactctaacgctcaagtcagtattgaga 36022502  T
Q  187 ctgagaaagagtgtgtaaaaagtgtgag 214  Q
    |||||||||||| |||||||||||||||    
T  36022503 ctgagaaagagtttgtaaaaagtgtgag 36022530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 12127833 - 12127688
Alignment:
Q  64 aggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactc 163  Q
    ||||| ||||||||||||   |||| |||| ||||  |||||| ||| |||| |||||||  |||| | || |||||| | |||||||||||||||||||    
T  12127833 aggatagatgagaggcaacattggcagaaaatgcttcggtacggtggtgatgggtcttcg--cggtgggacgaaaggtacctgcaggcacgttagcactc 12127736  T
Q  164 caatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||| |||| |||||||| || |||| |||| | ||||||| |||||||    
T  12127735 caacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgt 12127688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 3586354 - 3586429
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||||||| |||||||||| ||||| | |||| |||||||| ||||||||||||| |||| ||| |||||||    
T  3586354 aaaggtgcatgccggcacgttaggactccgacgctcaagtcagtaatggaactgagaaaaagtgagtagaaagtgt 3586429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 17671915 - 17672020
Alignment:
Q  85 tggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattgg 184  Q
    |||||||||||||| ||||||  ||||||||||||||| |  ||| |||| |||||||  ||||| ||||||||| ||||||||||| | ||||| | ||    
T  17671915 tggcggaaagtgctctggtacagtggcgatgagtcttcat--ggtggaacgaaaggtgtctgcagacacgttagcgctccaatgctcaaatcagtgtagg 17672012  T
Q  185 aactgaga 192  Q
    || |||||    
T  17672013 aaatgaga 17672020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 20120328 - 20120404
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgt 202  Q
    |||| |||| |||||||  |||||||||||||||||||| |  ||| |||||||| || ||||||||||||||||||    
T  20120328 cggtggaacgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgt 20120404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 29710984 - 29711073
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    ||||||| |||||||  |||| |||||||||||| ||||| ||||||||||||||||| |||| ||||| || ||||| ||| | |||||||    
T  29710984 ggcgatgcgtcttcg--cggtggaacaaaaggtgtatgcatgcacgttagcactccaacgctcaagtcactaatggaattgaaagagagtgt 29711073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 36267489 - 36267561
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 208  Q
    |||||||| |||| ||| |||| |||||||| |||| |||||||| || ||||||||||||||||||| ||||    
T  36267489 aaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaag 36267561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 18135862 - 18135937
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| || ||||||||||| ||||  | |||| ||| |||| ||||||||||||||||||||||| ||||||    
T  18135862 aaaggtgcctgtaggcacgttagtactctgacgctcaagttagtaatggaactgagaaagagtgtgtaagaagtgt 18135937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 24499796 - 24499847
Alignment:
Q  152 acgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||||||||||||| |||| |||||||| ||||| ||||||||||||||||    
T  24499796 acgttagcactccaacgctcaagtcagtaatggaaatgagaaagagtgtgta 24499847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 15825154 - 15825220
Alignment:
Q  145 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||||||   | |||| |||| ||| |||||||||||||||||||||| |||||||    
T  15825154 tgcaggcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgt 15825220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 17626842 - 17626948
Alignment:
Q  84 gtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattg 183  Q
    ||||||||||||||| ||||||  ||||||||||||||  |  ||| |||| |||||||  ||||| ||||||||| ||||||||||| | ||||| | |    
T  17626842 gtggcggaaagtgctttggtacagtggcgatgagtctt--tatggtggaacgaaaggtgtctgcagacacgttagctctccaatgctcaaatcagtgtag 17626939  T
Q  184 gaactgaga 192  Q
    ||| |||||    
T  17626940 gaaatgaga 17626948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 18770317 - 18770380
Alignment:
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||||  | |||| |||||||| || || |||||||||||||||| |||||||    
T  18770317 aggcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgt 18770380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 10923276 - 10923191
Alignment:
Q  125 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    ||||| |||| ||||||| ||| |||||||||| |||||| |  ||| |||||||  ||||||| | |||||||||||| ||||||    
T  10923276 gcggtggaacgaaaggtgtatgtaggcacgttatcactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtg 10923191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 12634832 - 12634913
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |||| |||||||||||||||||||||| ||||||||  ||  ||||||| | |||| |||||  || ||||| |||||||||    
T  12634832 gaacgaaaggtgcatgcaggcacgttaacactccaactcttaagtcagtgtaggaaatgagatggaatgtgtgaaaagtgtg 12634913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 31013553 - 31013593
Alignment:
Q  139 ggtgcatgcaggcacgttagcactccaatgctctagtcagt 179  Q
    ||||| || |||||||||||||||||||||||| |||||||    
T  31013553 ggtgcttgtaggcacgttagcactccaatgctcaagtcagt 31013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 33101679 - 33101532
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||||||||||||   |||||||||||| |  |||||  ||  ||||||||||||  | ||||||  ||||||||||||||||||||||||||    
T  33101679 tgaggatggatgagaggcaacactggcggaaagtgtttcggtacagtgttgatgagtcttcg--ctgtagaatgaaaggtgcatgcaggcacgttagcac 33101582  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||| |||| ||| ||||||||||||| |||||||| |||||||    
T  33101581 tccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgt 33101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 5459880 - 5459734
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||||||||||||||||| | | |||||||| ||||| ||||||| |||||||||||||||||  ||| | || ||||||||||||||| ||||||||||    
T  5459880 tgaggatggatgagaggcgacgatggcggaatgtgctctggtacggtggcgatgagtcttcgt--ggtgggacgaaaggtgcatgcaggtacgttagcac 5459783  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| | || |  |||||  || |||||||||||||||||| |||||||    
T  5459782 tccaacgttcaaaacagtaacgg-actgagaaagagtgtgtagaaagtgt 5459734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 34273025 - 34273153
Alignment:
Q  81 atggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagta 180  Q
    |||||||| ||||||| |  |||||| |||||| |||||||  |||||| | || |||||| | |||| |||||||||||||||||||||| ||||||||    
T  34273025 atggtggctgaaagtgtttcggtacggtggcgaggagtctt--tgcggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagta 34273122  T
Q  181 ttggaactgagaaagagtgtgtaaaaagtgt 211  Q
      ||||||||||||||||||||| |||||||    
T  34273123 acggaactgagaaagagtgtgtagaaagtgt 34273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 5671689 - 5671836
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||||||||| |||||||||  |||| ||||| |||| || |||| ||||||||||||| |  || | ||  |||||||||  || ||||||||||||||    
T  5671689 tgaggatggacgagaggcaacagtggtggaaaatgctctgatacggtggcgatgagtctgcccgctggag--caaaaggtgtttgtaggcacgttagcac 5671786  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||| ||| |||| |||||||||||||||||||||| |||||||    
T  5671787 tccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgt 5671836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 26977719 - 26977804
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagt 209  Q
    |||||| |||| |||||||| |||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||| |||||    
T  26977719 tgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagt 26977804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 43344601 - 43344469
Alignment:
Q  75 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 174  Q
    ||||||||| | | |||||||| | ||||||| ||||||||||||||  |||||| | |  |||||||  |||||  |||||||||||| || |||| ||    
T  43344601 gaggcaatgatagtggaaagtgttctggtacggtggcgatgagtctt--tgcggtgggatgaaaggtgtctgcagaaacgttagcactcgaacgctcaag 43344504  T
Q  175 tcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    ||||||||| |||| |||||||||||||||||||||    
T  43344503 tcagtattgaaact-agaaagagtgtgtaaaaagtg 43344469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 14255155 - 14255055
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 208  Q
    |||||||||||||||||  || |||| || ||||| |||| ||||| ||||||||||| |||| ||||| || || |||||||||||||||||||| |||    
T  14255155 ggcgatgagtcttcgtg--gtggaacgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaag 14255058  T
Q  209 tgt 211  Q
    |||    
T  14255057 tgt 14255055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 16050394 - 16050461
Alignment:
Q  145 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |||||||||||||||||||||| |||| ||||| |  |||||||||||||||||||||| ||||||||    
T  16050394 tgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtg 16050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 25408087 - 25408162
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||| || |||||| | ||||||||||| ||||||    
T  25408087 aaaggtgcctgcagacacgttagcactccaatgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgt 25408162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 48637515 - 48637617
Alignment:
Q  108 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||  | |||| |||||||| ||||||||| | ||||  ||||| ||    
T  48637515 tggcgatgagtcttc-tgcggtagaacgaaaggtgcctgcaggcacgtcagcactctgacgctcaagtcagtaatggaactgaaagagaggatgtaagaa 48637613  T
Q  208 gtgt 211  Q
    ||||    
T  48637614 gtgt 48637617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 12177366 - 12177452
Alignment:
Q  125 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||| |||||||| | || ||||||||||||||| |  ||| |||||||| |||||||||||||||||||||| |||||||    
T  12177366 gcggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgt 12177452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 18246075 - 18246213
Alignment:
Q  75 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 174  Q
    ||||||| | ||||||||  | || ||||||| ||| |||||||||| |  |||| |||| |||||||  || | |||||||| |||||||| |||| ||    
T  18246075 gaggcaacgatggcggaagatactctggtacggtggtgatgagtcttgg--cggtggaacgaaaggtgtctgtaagcacgttaacactccaacgctcaag 18246172  T
Q  175 tcagtattggaactgagaaagagtgtgtaaaaagtgtgaga 215  Q
    | |||||| ||| ||||||||||||| ||||||||||||||    
T  18246173 tgagtattagaattgagaaagagtgtataaaaagtgtgaga 18246213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 4601612 - 4601513
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 208  Q
    |||||| ||||||||  |||| |||| |||||||  |||||||||||||||||||| | |||| |||||||| || |||||||||| | ||||||| |||    
T  4601612 ggcgataagtcttcg--cggtggaacgaaaggtgactgcaggcacgttagcactccgacgctcaagtcagtaatgaaactgagaaataatgtgtaataag 4601515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 22414734 - 22414841
Alignment:
Q  102 gtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtg 201  Q
    ||||| || |||||||||||  |||||| |||| ||||||||  ||||||||||||||||||  | |||| |||||||| || |||||| ||| ||||||    
T  22414734 gtacggtgacgatgagtctt--tgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtg 22414831  T
Q  202 taaaaagtgt 211  Q
    || |||||||    
T  22414832 tagaaagtgt 22414841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 16030360 - 16030461
Alignment:
Q  108 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    |||||||||||||||   |||| |||  |||||||  ||||||||||||| || || ||||||| |||||||| |||||||||  ||||||||||| |||    
T  16030360 tggcgatgagtcttca--cggtggaatgaaaggtgtctgcaggcacgttatcagtcaaatgctcaagtcagtaatggaactgaataagagtgtgtagaaa 16030457  T
Q  208 gtgt 211  Q
    ||||    
T  16030458 gtgt 16030461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 3590813 - 3590874
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgaga 192  Q
    |||| |||||||||||||||||| |||||||||| | | || |||||||| |||||||||||    
T  3590813 gaacgaaaggtgcatgcaggcaccttagcactccgacgatcaagtcagtaatggaactgaga 3590874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 23728942 - 23728845
Alignment:
Q  111 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    |||||||||||||  |||| |||| ||||||| ||||||||||||||||| |   | |||| ||||| || ||||| ||||||||||||||||| |||||    
T  23728942 cgatgagtcttcg--cggt-gaacgaaaggtggatgcaggcacgttagcattatgacgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtg 23728846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 2612768 - 2612692
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    |||| |||||||  ||||| |||||||| | |  || |||| ||||||||||||||||||| |||||||||||||||    
T  2612768 gaacgaaaggtgtctgcagacacgttagtattgaaacgctcaagtcagtattggaactgaggaagagtgtgtaaaaa 2612692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 23280464 - 23280412
Alignment:
Q  51 gatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggt 103  Q
    |||||||||| |||||||| ||||| ||||| |||||||||||||||| ||||    
T  23280464 gatctgttcggtgaggatgaatgagtggcaacggtggcggaaagtgctctggt 23280412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 2141115 - 2141000
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||||||| |||| || |||||||| ||||| ||||| | || || | ||||||| |||||   ||||||||| ||||||| |||||||||  |||||||    
T  2141115 tgaggatgaatgaaagacaatggtgacggaatgtgctctagt-cggtagcgatgaatcttca--cggtagaacgaaaggtgtatgcaggcaacttagcac 2141019  T
Q  162 tccaatgctctagtcagta 180  Q
    ||||| |||| ||||||||    
T  2141018 tccaacgctcaagtcagta 2141000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 30732511 - 30732549
Alignment:
Q  139 ggtgcatgcaggcacgttagcactccaatgctctagtca 177  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  30732511 ggtgcctgcaggcacgttagcactccaatgctcaagtca 30732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 23280365 - 23280293
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    |||| |||||||| ||||| || |||| ||||| ||  ||| |||||||| |||||||||||||| |||||||    
T  23280365 gaacgaaaggtgcctgcagacatgttatcactcaaactctcaagtcagtaatggaactgagaaagtgtgtgta 23280293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 52565566 - 52565634
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtg 199  Q
    |||| |||||||| ||||| |||||||||||||  | |||| ||||||||  |||||||| ||||||||    
T  52565566 gaacgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtg 52565634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 47253265 - 47253343
Alignment:
Q  133 acaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||| |||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  47253265 acaaaaggtgcttgcaggcatgttagcactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgt 47253343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 12683753 - 12683851
Alignment:
Q  111 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    |||||||||||  |||||| |||| |||||||| |||||||||||||||||||||| |||| ||| |||| || ||||||||||||||||||| ||||||    
T  12683753 cgatgagtctt--tgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtg 12683850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 49 - 212
Target Start/End: Original strand, 10981772 - 10981933
Alignment:
Q  49 ttgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgca 148  Q
    ||||||||| |||||||||||||||||||||||   ||| |||| |||||   ||||| ||  ||||||||||||  | || | || |||||||| ||||    
T  10981772 ttgatctgtccgatgaggatggatgagaggcaacaatggtggaatgtgctccagtacggtgatgatgagtcttcg--cagtgggacgaaaggtgcctgca 10981869  T
Q  149 ggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |  ||||| |||||||||  ||| |||||||| |||||| ||||||||||||||||||||||||    
T  10981870 gcaacgttggcactccaacactcaagtcagtaatggaaccgagaaagagtgtgtaaaaagtgtg 10981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 19809621 - 19809767
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||| | |||||| ||||| |||| ||||| ||||||| || |||||||||||||  |||| || | |||||| | ||||| || ||||||||    
T  19809621 tgaggatggataaaaggcaacggtggtggaatgtgctctggtacggtgacgatgagtcttcg--cggttga-cgaaaggttcctgcagacatgttagcac 19809717  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||| |||||||| || |||| |||||||||||||| |||||||    
T  19809718 tccaacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgt 19809767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 15514672 - 15514586
Alignment:
Q  125 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| |||| || ||||| || ||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||| ||||||    
T  15514672 gcggtggaacgaagggtgcctgtaggcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgt 15514586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 3981867 - 3982002
Alignment:
Q  60 gatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagc 159  Q
    |||||||||||||||||||||| ||||||||||| || |  |||||  ||  |||||||||||   |||| |||| ||||||||||||| ||||||||||    
T  3981867 gatgaggatggatgagaggcaacggtggcggaaaatgttccggtacagtgaggatgagtcttc--acggtggaacgaaaggtgcatgcatgcacgttagc 3981964  T
Q  160 actccaatgctctagtcagtattggaactgagaaagagtg 199  Q
    |||||||  ||| ||||  || ||||||||| ||||||||    
T  3981965 actccaacactcaagtc--taatggaactgaaaaagagtg 3982002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 29157081 - 29157160
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    |||||| |||| |||||||||||||| |||||| ||||||||| |||| ||| |||| ||||||||||||| ||||||||    
T  29157081 tgcggtggaacgaaaggtgcatgcagacacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtgtgta 29157160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 13171064 - 13171134
Alignment:
Q  130 agaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    ||||| |||||||| ||||||||||||||||||||||  ||| |||||||| |||||||||| ||||||||    
T  13171064 agaacgaaaggtgcttgcaggcacgttagcactccaactctcaagtcagtaatggaactgagcaagagtgt 13171134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 15742276 - 15742178
Alignment:
Q  111 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    |||||||||||||||  || || | |||||||| ||| |||||||||||||||  | |||| |||||||| ||||||||||||| ||||||||| |||||    
T  15742276 cgatgagtcttcgtg--gtggagcgaaaggtgcctgctggcacgttagcactcttacgctcaagtcagtaatggaactgagaaaaagtgtgtaagaagtg 15742179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 40979235 - 40979169
Alignment:
Q  59 cgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtg 125  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||| | ||| ||||||||| ||||    
T  40979235 cgatgaggatggatgagaggcaatggtagtggaaagtgctctggtatggtggtgatgagtctccgtg 40979169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 14602123 - 14602040
Alignment:
Q  128 gtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||| |||| ||  |||||||||||||||| ||||| |||| |||||||| || |||||| | ||||||||||| ||||||    
T  14602123 gtagaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgt 14602040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 16012562 - 16012503
Alignment:
Q  145 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaa 204  Q
    ||||||||||||| |||||| | |||| |||||||| ||||||||||| |||||||||||    
T  16012562 tgcaggcacgttaacactccgacgctcaagtcagtaatggaactgagatagagtgtgtaa 16012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 1723952 - 1724009
Alignment:
Q  136 aaaggtgcatgcaggca-cgttagcactccaatgctctagtcagtattggaactgaga 192  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||| |||| |||||    
T  1723952 aaaggtgcatgcagacaacgttagcactccaatgctcaagtcagtataggaaatgaga 1724009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 5518526 - 5518606
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||  ||||| |||||||||||| ||| |||| |||||||| | ||||||||| ||| ||||||| ||||||    
T  5518526 gaacgaaaggtgagtgcagacacgttagcacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgt 5518606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 19818610 - 19818674
Alignment:
Q  59 cgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcg 123  Q
    |||||||||||||| | |||||| ||||| |||| ||||| ||||||| || |||||||||||||    
T  19818610 cgatgaggatggataaaaggcaacggtggtggaatgtgctctggtacggtgacgatgagtcttcg 19818674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 215
Target Start/End: Complemental strand, 26894880 - 26894742
Alignment:
Q  75 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 174  Q
    ||||||| | || |||||||||||  |||||| |||||  |||||||| ||  || | || ||||||||||||| ||| ||| || |||  | |||| ||    
T  26894880 gaggcaacgatgtcggaaagtgcttcggtacggtggcggcgagtcttcatg--gtgggacgaaaggtgcatgcatgcatgttggctctctgacgctcaag 26894783  T
Q  175 tcagtattggaactgagaaagagtgtgtaaaaagtgtgaga 215  Q
    ||||| | |||| |||||| |||||| ||||||||||||||    
T  26894782 tcagtttaggaaatgagaaggagtgtttaaaaagtgtgaga 26894742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 19643730 - 19643766
Alignment:
Q  173 agtcagtattggaactgagaaagagtgtgtaaaaagt 209  Q
    |||||||| |||||||||||||||||||||| |||||    
T  19643730 agtcagtaatggaactgagaaagagtgtgtagaaagt 19643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 23269165 - 23269311
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||| |||||| ||||||||| || ||||||| |||| ||||||| ||||||||||||||  |||||| |||| |||||||  | |||||| ||||||||    
T  23269165 tgagtatggataagaggcaatagttgcggaaaatgctctggtacggtggcgatgagtctt--tgcggtggaacgaaaggtgtctacaggcaagttagcac 23269262  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    |||||  ||  |||||||| ||||||||| |||||||||||| ||||||    
T  23269263 tccaacacttaagtcagtaatggaactgataaagagtgtgtagaaagtg 23269311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 26917070 - 26916923
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||||||||||||||||||| |||||| ||||| ||| | ||||  |||||| |||||||||||  |  |||| ||||||||||  |||||||||||| |    
T  26917070 tgaggatggatgagaggcaacggtggcagaaagggctctagtacagtggcgacgagtcttcgtgatg--gaacgaaaggtgcatttaggcacgttagcgc 26916973  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
     | || |||| |||||||| ||||||||||| |||||||||| |||||||    
T  26916972 actaacgctcaagtcagtaatggaactgagagagagtgtgtagaaagtgt 26916923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 17927889 - 17927729
Alignment:
Q  49 ttgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgca 148  Q
    |||||||||  | ||||||||||| |||||||  | |||||||||||| | | ||| | ||||||||| |||| |||  || | || |||||||||||||    
T  17927889 ttgatctgtctggtgaggatggattagaggcagcgatggcggaaagtgttctagtatggtggcgatgactctttgtg--gtgggacgaaaggtgcatgca 17927792  T
Q  149 ggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
     ||||||||||||||||| |||  |||||||| |||||||||||  |||| |||| |||||||    
T  17927791 tgcacgttagcactccaacgcttaagtcagtaatggaactgagattgagtatgtagaaagtgt 17927729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 210
Target Start/End: Complemental strand, 1909880 - 1909734
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||| |||||||| ||||||| | ||| |||| | ||||||| |||  | |||||||  ||| || |||| |||||||||||||| ||||||||||     
T  1909880 tgaggatagatgagagccaatggtcgaggagagtgatctggtacggtggtaacgagtctt--tgcagtggaacgaaaggtgcatgcagacacgttagcat 1909783  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    | ||| |||  |||||||| || |||||||||||||||||| |||||||    
T  1909782 ttcaacgctaaagtcagtaatgaaactgagaaagagtgtgtgaaaagtg 1909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 3459584 - 3459509
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| |||||||||| ||||||||||| |||||||    
T  3459584 aaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgt 3459509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 15057955 - 15058102
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||||||||||||  ||| ||||||||| |   ||||| || ||||||||||| |||  || |||| ||||||||||||||||||||||||||    
T  15057955 tgaggatggatgagaggcaacagtgacggaaagtg-tccagtacggtgacgatgagtctttgtg--gtggaacgaaaggtgcatgcaggcacgttagcac 15058051  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    | ||| || | ||| |||| || || ||||||| | |||||| ||||||||    
T  15058052 tacaacgcacaagttagtaatgaaattgagaaaaaatgtgtagaaagtgtg 15058102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 18322923 - 18323001
Alignment:
Q  125 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||| ||||||||||||||||||| || |||| |||||||| |||| |||||||| | ||||||||||||| ||||||    
T  18322923 gcggtggaacaaaaggtgcatgcagacatgttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgta 18323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 30477564 - 30477707
Alignment:
Q  66 gatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactcca 165  Q
    ||||||||||||||||  |||||||||||||||   ||| | |||| ||||| |||||  ||||   || |||| ||  |||| ||||||||||||||||    
T  30477564 gatggatgagaggcaacagtggcggaaagtgctccagtatggtggcaatgagacttcg--cggtgagacgaaagatgtctgcatgcacgttagcactcca 30477661  T
Q  166 atgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    | |||| ||||||||  | ||||||||||||||||||| |||||||    
T  30477662 acgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgt 30477707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 24677678 - 24677612
Alignment:
Q  145 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||| |||  |||||| ||||||    
T  24677678 tgcaagcatgttagcactccaatgctcaagtcagtattggaactgagagagaaagtgtaagaagtgt 24677612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 13754749 - 13754824
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| ||| ||||||||| |||| ||  |||| |||||||| || ||||||||||||||||||| |||||||    
T  13754749 aaaggtgcctgctggcacgttaacactacatcgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgt 13754824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 13764980 - 13765055
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||  |||||||||||||  ||||||||| || ||| |||| || ||||||||||||||||||| |||||||    
T  13764980 aaaggtgtctgcaggcacgttaagactccaatgttcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgt 13765055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 17319747 - 17319657
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagca---ctccaatgctctagtcagtattggaactgagaaagagt 198  Q
    |||||||||||||||||  || |||| ||||||||||||||||| |||||||   |||  ||| || |||||||| |||||||||||||||||    
T  17319747 ggcgatgagtcttcgtg--gtggaacgaaaggtgcatgcaggcatgttagcagcactctgatgttcaagtcagtaatggaactgagaaagagt 17319657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 21416746 - 21416804
Alignment:
Q  153 cgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||||||| | |||| |||||||| || ||||||||||||||||||| |||||||    
T  21416746 cgttagcactccgacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgt 21416804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 14666951 - 14666911
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactcc 164  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  14666951 tgcggtggaacaaaaggtgcctgcaggcacgttagcactcc 14666911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 24576688 - 24576608
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||| ||||||||||||| |||||  | |||| |||||||| ||||||| | || |||||||||| ||||||    
T  24576688 gaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgt 24576608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 6928174 - 6928115
Alignment:
Q  152 acgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||| | |||  ||| |||||||| |||||||||||||||||||||| |||||||    
T  6928174 acgttagcatttcaacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgt 6928115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 23497304 - 23497205
Alignment:
Q  65 ggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactcc 164  Q
    |||||||||||||||||  |||||||||| | ||  |||||| ||||||||||||||  ||| || |||| ||||||   |||| ||| |||||||||||    
T  23497304 ggatggatgagaggcaacagtggcggaaaatactcaggtacggtggcgatgagtctt--tgcagtggaacgaaaggtatctgcacgcatgttagcactcc 23497207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 5859815 - 5859872
Alignment:
Q  145 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgt 202  Q
    ||||| |||||||||||||||| |||| ||||| || ||||||| ||||| |||||||    
T  5859815 tgcagacacgttagcactccaacgctcaagtcaataatggaactaagaaatagtgtgt 5859872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 29373351 - 29373504
Alignment:
Q  48 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgc 147  Q
    |||||||||| |  ||||||| ||||||||||||| |||| ||||| || | ||||||| ||| ||||||| ||  ||||||  ||| ||||||||||||    
T  29373351 attgatctgtccagtgaggatagatgagaggcaatagtggtggaaaatgttctggtacggtggtgatgagtttt--tgcggtgaaacgaaaggtgcatgc 29373448  T
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||| ||||| |||||||||||| |||||||  || || ||||||||||||||||    
T  29373449 aggcatgttaggactccaatgctcaagtcagttgtgtaattgagaaagagtgtgta 29373504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 13159289 - 13159439
Alignment:
Q  59 cgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttag 158  Q
    ||||||||||||||||||||||| |||||  |||  ||||   |||||  |||| ||||||||  |||||  | |||||| |||| |||||||||||||     
T  13159289 cgatgaggatggatgagaggcaacggtgggagaagatgctccagtacggcggcgttgagtctt--tgcggcgggacaaaatgtgcctgcaggcacgttaa 13159386  T
Q  159 cactccaatgctctagtcagtattggaactgaga-aagagtgtgtaaaaagtg 210  Q
    ||||||||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  13159387 cactccaatgctcaaatcagtattggaactaagagaagagtgtgtaaaaagtg 13159439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 9573538 - 9573450
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |||||| ||||||  ||||| |||||||||||||||||||||| || | ||||| ||| |||||||||||||||||||||| |||||||    
T  9573538 tgcggtggaacaaggggtgcctgcaggcacgttagcactccaacgcacaagtcaatatgggaactgagaaagagtgtgtaagaagtgtg 9573450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 21161147 - 21161307
Alignment:
Q  48 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgc 147  Q
    |||||||||| |  |||||||||||||||||||||| |||| |||  |||| ||| |||  |  ||||||||||||  |||| |||| |||| ||  |||    
T  21161147 attgatctgtccagtgaggatggatgagaggcaatgttggcagaatatgctctggaacggggaagatgagtcttcg--cggtggaacgaaag-tgtctgc 21161243  T
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||||||| |||| |||||||| |||| || |||||| ||||||| |||||||    
T  21161244 aggcacgttagcactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgt 21161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 7486536 - 7486603
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||| ||||||    
T  7486536 aaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaagattgtgta 7486603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 9135471 - 9135390
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    |||| |||| ||||||||||  |||||||||||||||| || |||| |||||||| ||||| ||||||||||||||||||||    
T  9135471 cggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaa 9135390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 12644766 - 12644851
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||| ||||||||||||||||| ||||||||||| | ||||  ||||||| ||||||||||||| |||||||  |||||||    
T  12644766 cggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgt 12644851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 16987226 - 16987117
Alignment:
Q  100 tggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtg 199  Q
    |||||||  ||| |||||||||||  |||| |||| |||||||||||| |||||||||||||||  |  ||| || ||||| ||||| ||||||||||||    
T  16987226 tggtacggcggcaatgagtcttcg--cggtggaacgaaaggtgcatgcgggcacgttagcactctgacactcaagccagtaatggaattgagaaagagtg 16987129  T
Q  200 tgtaaaaagtgt 211  Q
    ||||| ||||||    
T  16987128 tgtaagaagtgt 16987117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 39879373 - 39879453
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||| ||||| ||||||| ||||  || |||| |||||||| || |||||||||||||||||||||||||||    
T  39879373 gaacgaaaggtgcctgcagacacgttaacactttaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgt 39879453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 5863145 - 5863245
Alignment:
Q  101 ggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    |||||| | |||||||||||||   ||||||||| |||  ||| |||| |||||||||||||| || |||| |||||||| | |||||||||||||||||    
T  5863145 ggtacggtagcgatgagtcttca--cggtagaacgaaatttgcgtgcaagcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtgt 5863242  T
Q  201 gta 203  Q
    |||    
T  5863243 gta 5863245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 9868039 - 9867964
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||| ||||||||||||  | |||| |||||||| |||||||||| |||||| |||| |||||||    
T  9868039 aaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatggaactgaggaagagtttgtagaaagtgt 9867964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 13292248 - 13292148
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 208  Q
    |||||||||||||||||  || |||  |||||||  |||||| |||||||||||| || |||| |||||||| || |||||| ||||||||||||| |||    
T  13292248 ggcgatgagtcttcgtg--gtggaaggaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaagaag 13292151  T
Q  209 tgt 211  Q
    |||    
T  13292150 tgt 13292148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 26763011 - 26762936
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||| | |||||||||||||||||||||| |||| ||||||||  |||||| | ||| |||||||| |||||||    
T  26763011 aaaggttcttgcaggcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgt 26762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 5925585 - 5925519
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgaga 192  Q
    |||| |||| |||||||  |||||||||||||||||||||| | || |||||||| |||||||||||    
T  5925585 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgaga 5925519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 43172114 - 43172068
Alignment:
Q  149 ggcacgttagcactccaatgctctagtcagtattggaactgagaaag 195  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||    
T  43172114 ggcacgttagcactccaatgctcaagtcaataatggaactgagaaag 43172068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 10287706 - 10287621
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||| |||||| | |||||||||||||||||   || |||| |||||||| |||| |||||||| ||||||||| ||||||    
T  10287706 cggtggaaccaaaggttcctgcaggcacgttagcaccttaacgctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgt 10287621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 18773960 - 18774028
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgaga 192  Q
    |||||| |||| ||||||||||||||||||||||||||| | | | || | |||||| |||||||||||    
T  18773960 tgcggtggaacgaaaggtgcatgcaggcacgttagcacttcgacgatcaaatcagtaatggaactgaga 18774028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 12265202 - 12265165
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactc 163  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  12265202 cggtggaacaaaaggtgcatgcaggcacgttaacactc 12265165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 5929100 - 5929036
Alignment:
Q  147 caggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||| ||||||||||||  ||| |||||||| ||||||||| | |||| |||||| ||||||    
T  5929100 caggcacattagcactccaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgt 5929036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 34187218 - 34187366
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    |||||||| ||||||||||| || ||||||||||| |  | |||  ||| ||| ||||||  |||||| |||| |||||||  ||||| |||||||||||    
T  34187218 tgaggatgaatgagaggcaacggcggcggaaagtgttccgctacagtggtgataagtctt--tgcggtggaacgaaaggtgtctgcagacacgttagcac 34187315  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
     ||||  ||| |||||||| |||||||||||||||||||||||||||||||    
T  34187316 accaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtg 34187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 9277412 - 9277324
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |||||| |||| |||||| | ||||| ||||||||||||  || |||| |||||||||||||||||||||||||| |||||||||||||    
T  9277412 tgcggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtg 9277324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 25008490 - 25008414
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    |||||||||||  ||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||||    
T  25008490 aaaggtgcatgtcggcacgttaacactccaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtgtg 25008414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 9292163 - 9292043
Alignment:
Q  90 gaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactg 189  Q
    ||||||||| || |||| ||| || |||||||  | |||| |||| |||||||| |||| |||||||||||| | || |||| |||||||||||||||||    
T  9292163 gaaagtgctctgctacggtggtgaggagtctt--tacggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactg 9292066  T
Q  190 agaaagagtgtgtaaaaagtgtg 212  Q
    ||||| ||| |||||||||||||    
T  9292065 agaaatagtatgtaaaaagtgtg 9292043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 19730687 - 19730616
Alignment:
Q  140 gtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||| ||||||||||||| |||| ||||| || ||||||||||||||||||||||| ||||||    
T  19730687 gtgcatgcaggcatgttagcactccaacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgt 19730616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 689957 - 689882
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||  |||||| || |||||||| |||||||| |||||||| |||||||||||||| ||||||| |||||||    
T  689957 aaaggtgtttgcaggtacattagcactgcaatgctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgt 689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 212
Target Start/End: Complemental strand, 10927041 - 10926917
Alignment:
Q  87 gcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaa 186  Q
    |||||||||| | ||||||| |||||| |||||||  ||||||   || |||||| ||||||| |||||||||||  ||| || | | ||||||||||||    
T  10927041 gcggaaagtgatctggtacggtggcgacgagtctt--tgcggtgagacgaaaggttcatgcagacacgttagcacctcaacgcccaattcagtattggaa 10926944  T
Q  187 ctgag-aaagagtgtgtaaaaagtgtg 212  Q
    ||||| |||||||| ||||||||||||    
T  10926943 ctgagaaaagagtgcgtaaaaagtgtg 10926917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 9403173 - 9403238
Alignment:
Q  146 gcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||| ||||| | |||| ||||| || ||||||||||||||||||||||| ||||||    
T  9403173 gcaggcacgttagaactccgacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgt 9403238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 16343573 - 16343645
Alignment:
Q  139 ggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| ||||||||||||||||||||||  ||| |||||||| ||||||||||| |||  |||||| ||||||    
T  16343573 ggtgcctgcaggcacgttagcactccaacactcaagtcagtaatggaactgagagagaaagtgtaagaagtgt 16343645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 20148296 - 20148372
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    |||||| |||| ||| |||||||||| |||||||||||||||  |||| ||| |||| ||||| |||||||||||||    
T  20148296 tgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgt 20148372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 22184532 - 22184456
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 200  Q
    |||||| |||| ||| |||||||||| |||||||||||||||  |||| ||| |||| ||||| |||||||||||||    
T  22184532 tgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgt 22184456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 15104406 - 15104293
Alignment:
Q  91 aaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactga 190  Q
    |||||||| ||||||| ||| ||||||||||||  ||||||||| |||||||  ||||||||| |    ||||||| |||| ||||||||| | ||  ||    
T  15104406 aaagtgctctggtacggtggggatgagtcttcg--cggtagaacgaaaggtgtctgcaggcacat----actccaacgctcaagtcagtatagaaaacga 15104313  T
Q  191 gaaagagtgtgtaaaaagtg 210  Q
    ||||| ||||||||||||||    
T  15104312 gaaagggtgtgtaaaaagtg 15104293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 18147297 - 18147372
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| || ||| |||||| |||||||| |||| ||||| || |||||| ||||||||||||||| |||||||    
T  18147297 aaaggtgcctgtaggaacgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgt 18147372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 19305467 - 19305530
Alignment:
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||||||||||  || |||| |||||||| |||||||||| ||||||||||| |||||||    
T  19305467 aggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgt 19305530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 22497423 - 22497323
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 208  Q
    |||||||||||||||  || | |||| |||||||| ||||| |||||||||||||| | |||| |||||||| |||||| || | |||| || |||||||    
T  22497423 ggcgatgagtcttcg--cgatggaacgaaaggtgcttgcagacacgttagcactccgacgctcaagtcagtaatggaacagaaagagagagtataaaaag 22497326  T
Q  209 tgt 211  Q
    |||    
T  22497325 tgt 22497323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 30680911 - 30681050
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||| |||  ||| |||||||| | |||||  |||| | ||| ||||||||||||  |||| | || |||||||  ||||  |||||||||||    
T  30680911 tgaggatggataagaaacaacggtggcgggaggtgctccggtaaggtggagatgagtcttcg--cggtgggacgaaaggtgtctgcaatcacgttagcac 30681008  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||| |||| |||||||| || |||||| |||||| |||||    
T  30681009 tccaacgctcaagtcagtaatgaaactgataaagagcgtgta 30681050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 12449705 - 12449608
Alignment:
Q  112 gatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||  || | || |||||||  || ||||||||||||||||  | |||| |||||||| |||| |||| ||||||||||||| ||||||    
T  12449705 gatgagtcttcgtg--gtgggacgaaaggtgtctgtaggcacgttagcactctgacgctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgt 12449608  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 31295640 - 31295568
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    |||| |||| ||| |||||||| ||||||||| | | |||| |||||||| || |||||||||||||||||||    
T  31295640 gaacgaaagttgcctgcaggcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtgtgta 31295568  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 2907853 - 2907973
Alignment:
Q  90 gaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactg 189  Q
    ||||||||||| ||||| || ||| |||| ||||  ||||| ||| |||||||  ||||| ||||||||||| | || |||| | ||| |||||||| ||    
T  2907853 gaaagtgctatagtacggtgtcgacgagttttcg--cggtaaaacgaaaggtgtctgcagtcacgttagcacgctaacgctcaaatcattattggaattg 2907950  T
Q  190 agaaagagtgtgtaaaaagtgtg 212  Q
    |||||| ||||| |||| |||||    
T  2907951 agaaagggtgtgcaaaacgtgtg 2907973  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 3404925 - 3404887
Alignment:
Q  173 agtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  3404925 agtcagtaatggaactgagaaagagtgtgtagaaagtgt 3404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 10115770 - 10115712
Alignment:
Q  151 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagt 209  Q
    ||||||||| | ||||||||| |||||||| || ||||||||||||| | |||||||||    
T  10115770 cacgttagctccccaatgctcaagtcagtaatgaaactgagaaagagcgagtaaaaagt 10115712  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 34064176 - 34064261
Alignment:
Q  126 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||| |||||||  ||||||||||||| ||||   | | || |||||||| || |||| ||||||||||||||| ||||||    
T  34064176 cggtagaacgaaaggtgtgtgcaggcacgttaacactatgacgttcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgt 34064261  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 690064 - 690016
Alignment:
Q  48 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtg 96  Q
    ||||||||||||| |||||||||||||| || ||||||||  |||||||    
T  690064 attgatctgttcggtgaggatggatgagtggtaatggtggtagaaagtg 690016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 12424419 - 12424339
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||| |||||||||||||||||| | |   || |||||||| ||||||||||| |||  || ||||||||||    
T  12424419 gaacgaaaggtgcctgcaggcacgttagcactacgacaatcaagtcagtaatggaactgagagagaaagtctaaaaagtgt 12424339  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 14080382 - 14080418
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgct 98  Q
    |||||||||||||| | ||||||||||||||||||||    
T  14080382 tgaggatggatgagtgacaatggtggcggaaagtgct 14080418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 20148215 - 20148251
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgct 98  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  20148215 tgaggatggatgagtggcaatgatggcggaaagtgct 20148251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 22184613 - 22184577
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgct 98  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  22184613 tgaggatggatgagtggcaatgatggcggaaagtgct 22184577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 23768203 - 23768259
Alignment:
Q  155 ttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||||| |||||||| | ||||||| | | ||||||||| ||||||    
T  23768203 ttagcactccaatgctcaagtcagtaattgaactgaaagatagtgtgtaagaagtgt 23768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 27861053 - 27860973
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||  |||||||| ||||| |||| ||  ||| |||||||| ||||||||| | |||| |||||| ||||||    
T  27861053 gaacaaaaggtgtctgcaggcatgttagtactctaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgt 27860973  T

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Target: scaffold0505 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 7804 - 7951
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||||||||||||  |||||| ||||| || |  |||| |||||||||||||||   |||| |||  ||||||||||| ||||||||||||||    
T  7804 tgaggatggatgagaggcaaaagtggcgaaaagtactctattacggtggcgatgagtcttca--cggtggaaggaaaggtgcatgtaggcacgttagcac 7901  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    || || |||| | |||||| || || |||||||||||||||| |||||||    
T  7902 tctaacgctcaaatcagtaatgcaattgagaaagagtgtgtagaaagtgt 7951  T

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Target: scaffold0205 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 11027 - 10940
Alignment:
Q  124 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||| ||||| || ||||||||| | ||||||||||| ||||||    
T  11027 tgcggtggaacaaaaggtgtatgcaggcacgttagcactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaagtgt 10940  T

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Target: scaffold0205; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 22877 - 22952
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| ||| |||||||||||||||  | |||| |||||||| |||||||||||||  |||||||| ||||||    
T  22877 aaaggtgcctgcgggcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgt 22952  T

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Target: scaffold0140 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 6284 - 6364
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||  |||||||||||||||||| | | |||| |||||||| ||||||||||||| |||||||| |||||||    
T  6284 gaacaaaaggtgtttgcaggcacgttagcacttcgaagctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgt 6364  T

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Target: scaffold0360 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 13913 - 13988
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||| | ||||||||| ||||||| |||| |||||||| || ||||||||||||||||||| |||||||    
T  13913 aaaggtgcatgaatgcacgttagtactccaaagctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgt 13988  T

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Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 17143837 - 17143774
Alignment:
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||||||||||| | |||| |||||||| |||||||||||||||||||||| |||||||    
T  17143837 aggcacgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgt 17143774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 2312020 - 2311859
Alignment:
Q  48 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgc 147  Q
    |||||| ||| || |||| |||||||||||||||  |||||| ||||||||  |||||| |||||| ||||||||||  ||| |||  |||||||  |||    
T  2312020 attgatatgtccggtgagtatggatgagaggcaacagtggcgcaaagtgctccggtacggtggcgaagagtcttcgt--ggtggaatgaaaggtgtctgc 2311923  T
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||  ||||||||||||||| |||| | |||| |  |||  ||||||||| |||||| |||||||    
T  2311922 agatacgttagcactccaacgctcaaatcagcaagggatttgagaaagaatgtgtagaaagtgt 2311859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 21649378 - 21649471
Alignment:
Q  108 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||||||||||||||  |||| |||| |||||||| |||| |||||||||||| |||| | || |||||||| ||||||||||| ||| ||||||    
T  21649378 tggcgatgagtcttcg--cggtggaacgaaaggtgcctgcaagcacgttagcaccccaacgatcaagtcagtaatggaactgagagagaatgtgta 21649471  T

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Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 12516176 - 12516251
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| ||||| |||||||||||||| | |||| ||| |||| ||||||||||||||| ||||||| ||||||    
T  12516176 aaaggtgcctgcagacacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgt 12516251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 14860225 - 14860124
Alignment:
Q  108 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    ||||||||| ||||||||  || |||| |||||||| ||||||||| |||||||||  || ||| | |||||| ||||||||||||| ||| ||||| ||    
T  14860225 tggcgatgaatcttcgtg--gtggaacgaaaggtgcttgcaggcacattagcactctgattctcaactcagtaatggaactgagaaacagtttgtaagaa 14860128  T
Q  208 gtgt 211  Q
    ||||    
T  14860127 gtgt 14860124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 28723946 - 28723807
Alignment:
Q  62 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 161  Q
    ||||||||||||||||| ||  ||| || |||||| |  |||||| |||| |||||||||||  |||| |||| ||| ||||    ||||||||| |||     
T  28723946 tgaggatggatgagaggtaacagtgacgaaaagtgttccggtacggtggcaatgagtcttcg--cggtggaacgaaatgtgctaataggcacgttggcaa 28723849  T
Q  162 tccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    ||||| |||| ||||| || ||||||| ||||||||||||||    
T  28723848 tccaacgctcaagtcactaatggaactaagaaagagtgtgta 28723807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 8123014 - 8122970
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagta 180  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||    
T  8123014 aaaggtgtatgcaggcacgttagcactccaacgctcaagtcagta 8122970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 9801188 - 9801109
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||| |||| |||||||||||||| ||  ||| |||||||| | |||| ||||||||||||||| |||||||    
T  9801188 gaacgaaaggtgcctgcaagcacgttagcactc-aacactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgt 9801109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 12251954 - 12252047
Alignment:
Q  109 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaa 204  Q
    |||||||||||||||  |  ||| |||||||||||||||||||| ||||||||||  |  ||| ||||||||  | || |||||||||||||||||    
T  12251954 ggcgatgagtcttcg--caataggacaaaaggtgcatgcaggcatgttagcactctgacactcaagtcagtaacgaaaatgagaaagagtgtgtaa 12252047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 21342379 - 21342312
Alignment:
Q  144 atgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||||||||| || | ||| |||| |||||||| ||||||||| ||||||||| || |||||||    
T  21342379 atgcaggcacgttaacagtacaacgctcaagtcagtaatggaactgataaagagtgtatagaaagtgt 21342312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 30606931 - 30606994
Alignment:
Q  148 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||| ||||||| ||||| |||| |||||||| ||||| |||||||||||| ||| |||||||    
T  30606931 aggcatgttagcattccaacgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgt 30606994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 28715551 - 28715513
Alignment:
Q  173 agtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  28715551 agtcagtaatggaactgagaaagagtgtgtataaagtgt 28715513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 9007876 - 9007831
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtat 181  Q
    |||||||| ||||||||||||| |||||||| |||| |||||||||    
T  9007876 aaaggtgcctgcaggcacgttaacactccaacgctcaagtcagtat 9007831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 12108410 - 12108475
Alignment:
Q  136 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtg 201  Q
    ||||||||||||| ||| |||| |||||| | |||| ||| |||| ||||||||||||||| ||||    
T  12108410 aaaggtgcatgcatgcatgttaccactccgacgctcaagttagtaatggaactgagaaagaatgtg 12108475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 28715658 - 28715621
Alignment:
Q  59 cgatgaggatggatgagaggcaatggtggcggaaagtg 96  Q
    |||||||||||||||||||||||  |||||||||||||    
T  28715658 cgatgaggatggatgagaggcaaaagtggcggaaagtg 28715621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 69329 - 69248
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtg 212  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||| | |||| |||||  || ||||| |||||||||    
T  69329 gaacaaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtgtaggaaatgagatggaatgtgtgaaaagtgtg 69248  T

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Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 40778 - 40854
Alignment:
Q  127 ggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 203  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||| |||||||  ||||||||| | |||| |||||    
T  40778 ggtagaacgaaaggcgcatgcaggcacgttagcactccaacgctcaagtcagtgatggaactgaaagagagagtgta 40854  T

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Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 326 - 268
Alignment:
Q  153 cgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||||||| | |||| |||||||| ||||||||||||||||||||||| ||||||    
T  326 cgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgt 268  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 95913 - 95835
Alignment:
Q  133 acaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||||| | ||||||||||||| |||| ||| |||| ||| |||| |||||||||||||||||| ||| |||||||    
T  95913 acaaaaggttcctgcaggcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgt 95835  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 379684 - 379782
Alignment:
Q  111 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    |||||||||||||  |||| |||| ||||||||||  |||||||||||||||   |  ||  |||||||| ||||||||||||||||||||||| |||||    
T  379684 cgatgagtcttcg--cggtggaacgaaaggtgcatctaggcacgttagcactttgacactgaagtcagtaatggaactgagaaagagtgtgtaagaagtg 379781  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 121096 - 121036
Alignment:
Q  151 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||| ||||  |||||  |||||||| |||||||||||||||||||||| |||||||    
T  121096 cacgttagtactctgatgcttaagtcagtaatggaactgagaaagagtgtgtataaagtgt 121036  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 215255 - 215338
Alignment:
Q  128 gtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    ||||||| |||| ||  |||||||||||||||| ||||| |||| |||||||| || |||||| | ||||||||||| ||||||    
T  215255 gtagaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgt 215338  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 68892 - 68838
Alignment:
Q  144 atgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagt 198  Q
    |||||| |||||||||||||||| |||| ||| |||| |||||||||||||||||    
T  68892 atgcagacacgttagcactccaacgctcaagttagtaatggaactgagaaagagt 68838  T

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Target: scaffold0291 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 15515 - 15455
Alignment:
Q  151 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||||||||||||| | |||| |||||||| ||||||||||||||||| | || |||||||    
T  15515 cacgttagcactccgacgctccagtcagtaatggaactgagaaagagtatctagaaagtgt 15455  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 21714 - 21643
Alignment:
Q  140 gtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| ||| ||||||||||||||||||  ||| ||||||||||| |||||| | ||||||| ||| ||||||    
T  21714 gtgcctgcgggcacgttagcactccaacactcaagtcagtattgaaactgaaagagagtgtttaagaagtgt 21643  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 35248 - 35319
Alignment:
Q  140 gtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||||||||||||||  |  ||| ||||||||  ||||||||||||||||||||  |||||||    
T  35248 gtgcttgcaggcacgttagcactctgacactcaagtcagtaacggaactgagaaagagtgtgtggaaagtgt 35319  T

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Target: scaffold0380 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 6983 - 6885
Alignment:
Q  111 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 210  Q
    |||||||||||||||  || |||| |||| |||  | |||||||||||  |||  | |||| ||||||||||| ||||||||| |||||||||| |||||    
T  6983 cgatgagtcttcgtg--gtggaacgaaagatgctggtaggcacgttaggtctctgacgctcaagtcagtattgaaactgagaacgagtgtgtaagaagtg 6886  T

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Target: scaffold0174 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 29398 - 29332
Alignment:
Q  112 gatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagta 180  Q
    ||||||||||||  |||| |||| ||||||||||| || || ||||||||||||| |||| ||||||||    
T  29398 gatgagtcttcg--cggtggaacgaaaggtgcatggagtcatgttagcactccaacgctcaagtcagta 29332  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 4529 - 4449
Alignment:
Q  131 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 211  Q
    |||| |||||||  |||| ||||||||||||||||| |||| ||||| || || |||||| | |||| |||||| ||||||    
T  4529 gaacgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatgaaactgaaagagagagtgtaagaagtgt 4449  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 149141 - 149209
Alignment:
Q  139 ggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 207  Q
    |||||||| ||| ||||||||| | ||||||   ||| |||||||||| |||||| |||||||||||||    
T  149141 ggtgcatgtaggaacgttagcatttcaatgccgaagtgagtattggaaatgagaaggagtgtgtaaaaa 149209  T

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