View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14559_low_4 (Length: 373)
Name: NF14559_low_4
Description: NF14559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14559_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28859547 - 28859375
Alignment:
| Q |
1 |
tcaagtatttaagtttatcattttcaacttaaatcacaaaaaccacgggtcattctaaataatttaagtctgtcaatgatcttatgttgacaataaaata |
100 |
Q |
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| T |
28859547 |
tcaagtatttaagtttatcattttcaacttaaatcacaaaaaccacaggtcattttaaataatttaagtctgtcaatgatcttatgttgacaataaaata |
28859448 |
T |
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| Q |
101 |
acatgtggtccacatgaatgaattttatactgttattatattattatattggatgaaatttttaattgaaacg |
173 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28859447 |
acatgtggtccacatgaatgaattttatactgttattatattattatattggatgaaatttttaattgaaacg |
28859375 |
T |
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