View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14559_low_9 (Length: 255)

Name: NF14559_low_9
Description: NF14559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14559_low_9
NF14559_low_9
[»] chr7 (58 HSPs)
chr7 (12-231)||(10062865-10063084)
chr7 (12-213)||(48274352-48274553)
chr7 (62-232)||(3387367-3387536)
chr7 (109-240)||(16496241-16496372)
chr7 (92-213)||(9176835-9176956)
chr7 (92-235)||(1867211-1867353)
chr7 (92-213)||(14037049-14037169)
chr7 (92-213)||(14347079-14347199)
chr7 (92-214)||(16324802-16324922)
chr7 (92-213)||(14045621-14045741)
chr7 (92-213)||(14355651-14355771)
chr7 (137-214)||(15117364-15117440)
chr7 (147-214)||(15113848-15113914)
chr7 (12-70)||(12754791-12754849)
chr7 (132-213)||(11768090-11768171)
chr7 (164-231)||(1856383-1856450)
chr7 (164-231)||(13917555-13917622)
chr7 (147-213)||(37793392-37793458)
chr7 (167-231)||(68597-68662)
chr7 (149-214)||(42462859-42462924)
chr7 (149-213)||(16997080-16997144)
chr7 (193-236)||(10589664-10589707)
chr7 (171-213)||(17180529-17180571)
chr7 (167-236)||(9750728-9750797)
chr7 (167-236)||(18304654-18304723)
chr7 (178-231)||(47832692-47832744)
chr7 (149-213)||(17052762-17052826)
chr7 (109-231)||(11973092-11973215)
chr7 (138-236)||(16057170-16057268)
chr7 (164-230)||(13648284-13648350)
chr7 (95-216)||(15007646-15007767)
chr7 (12-70)||(47975017-47975075)
chr7 (109-233)||(12902216-12902340)
chr7 (169-214)||(16092396-16092441)
chr7 (172-236)||(39262692-39262757)
chr7 (149-213)||(18455590-18455654)
chr7 (152-216)||(38519674-38519738)
chr7 (149-231)||(810334-810416)
chr7 (193-236)||(11995237-11995280)
chr7 (109-231)||(21188907-21189030)
chr7 (164-234)||(25926278-25926349)
chr7 (193-236)||(26212884-26212926)
chr7 (174-232)||(40444256-40444315)
chr7 (164-215)||(42374303-42374354)
chr7 (147-213)||(11524799-11524865)
chr7 (138-227)||(15141218-15141308)
chr7 (178-216)||(15440214-15440252)
chr7 (174-231)||(16385443-16385501)
chr7 (12-70)||(19282914-19282972)
chr7 (164-214)||(19485972-19486022)
chr7 (149-214)||(129942-130006)
chr7 (172-236)||(9512209-9512273)
chr7 (176-236)||(12699635-12699695)
chr7 (149-213)||(17016597-17016661)
chr7 (12-69)||(38295470-38295527)
chr7 (175-231)||(14948316-14948371)
chr7 (172-231)||(16584035-16584095)
chr7 (174-229)||(27847030-27847086)
[»] chr8 (60 HSPs)
chr8 (12-232)||(26222313-26222532)
chr8 (12-232)||(26220421-26220640)
chr8 (147-240)||(13507205-13507298)
chr8 (147-240)||(13596737-13596830)
chr8 (92-235)||(24353896-24354038)
chr8 (92-214)||(40492027-40492149)
chr8 (115-216)||(22365508-22365609)
chr8 (92-235)||(17266122-17266264)
chr8 (92-213)||(14102352-14102471)
chr8 (121-240)||(22966813-22966933)
chr8 (92-213)||(2418003-2418122)
chr8 (109-213)||(19936240-19936343)
chr8 (167-213)||(39834559-39834605)
chr8 (131-211)||(22984532-22984612)
chr8 (99-234)||(19800609-19800743)
chr8 (193-240)||(21491883-21491930)
chr8 (109-231)||(32810431-32810554)
chr8 (167-236)||(6760129-6760199)
chr8 (109-213)||(28398436-28398540)
chr8 (164-236)||(14396888-14396960)
chr8 (149-213)||(20501230-20501294)
chr8 (109-216)||(22245234-22245341)
chr8 (109-216)||(22252312-22252419)
chr8 (149-213)||(22996699-22996763)
chr8 (92-234)||(17438643-17438785)
chr8 (109-231)||(20404016-20404139)
chr8 (167-236)||(23407255-23407325)
chr8 (149-213)||(20532536-20532600)
chr8 (147-231)||(22526394-22526478)
chr8 (149-213)||(17460208-17460272)
chr8 (147-206)||(17085077-17085136)
chr8 (147-206)||(17085311-17085370)
chr8 (149-216)||(22385074-22385141)
chr8 (109-215)||(24049347-24049454)
chr8 (147-213)||(22184026-22184092)
chr8 (167-232)||(23649423-23649488)
chr8 (178-218)||(5609838-5609878)
chr8 (138-213)||(7464904-7464980)
chr8 (162-236)||(17342737-17342813)
chr8 (149-212)||(22418588-22418651)
chr8 (12-75)||(12037285-12037348)
chr8 (109-215)||(15202304-15202411)
chr8 (147-213)||(16800344-16800411)
chr8 (123-213)||(21697416-21697507)
chr8 (109-215)||(37609720-37609827)
chr8 (174-232)||(45130214-45130273)
chr8 (174-223)||(17141792-17141842)
chr8 (193-231)||(18620350-18620388)
chr8 (138-231)||(20499481-20499574)
chr8 (193-231)||(21918195-21918233)
chr8 (193-227)||(26354886-26354920)
chr8 (193-231)||(28648257-28648295)
chr8 (186-231)||(22002676-22002720)
chr8 (186-231)||(38854436-38854480)
chr8 (72-100)||(17438788-17438816)
chr8 (72-100)||(19154136-19154164)
chr8 (72-100)||(22365455-22365483)
chr8 (14-70)||(22483650-22483706)
chr8 (149-217)||(23661283-23661351)
chr8 (72-100)||(24353865-24353893)
[»] chr6 (44 HSPs)
chr6 (12-236)||(16447732-16447955)
chr6 (12-232)||(19102444-19102663)
chr6 (12-212)||(21119807-21120007)
chr6 (62-232)||(3850978-3851147)
chr6 (97-213)||(19024231-19024347)
chr6 (109-213)||(23527300-23527405)
chr6 (164-240)||(23531869-23531945)
chr6 (149-213)||(14978543-14978607)
chr6 (149-213)||(25618900-25618964)
chr6 (164-236)||(27557665-27557737)
chr6 (12-75)||(25921869-25921932)
chr6 (147-213)||(22792430-22792496)
chr6 (176-233)||(19669335-19669391)
chr6 (109-216)||(17229061-17229168)
chr6 (149-216)||(18454115-18454182)
chr6 (109-215)||(31629859-31629966)
chr6 (193-231)||(18409011-18409049)
chr6 (92-213)||(18697361-18697482)
chr6 (186-231)||(1599056-1599101)
chr6 (100-213)||(19363304-19363415)
chr6 (167-227)||(19653066-19653127)
chr6 (149-214)||(20137562-20137627)
chr6 (149-214)||(22195242-22195307)
chr6 (109-213)||(23992966-23993071)
chr6 (149-213)||(33443950-33444014)
chr6 (174-236)||(18954953-18955017)
chr6 (193-236)||(4189828-4189871)
chr6 (164-231)||(8226723-8226789)
chr6 (174-236)||(16919823-16919886)
chr6 (164-215)||(17201078-17201129)
chr6 (177-236)||(23415917-23415975)
chr6 (167-237)||(25628533-25628604)
chr6 (92-213)||(18198584-18198704)
chr6 (92-213)||(18707112-18707233)
chr6 (149-231)||(20556017-20556098)
chr6 (96-213)||(23077558-23077675)
chr6 (167-216)||(25959461-25959511)
chr6 (12-70)||(29045132-29045190)
chr6 (186-231)||(19005963-19006007)
chr6 (177-213)||(18895486-18895522)
chr6 (72-100)||(23077523-23077551)
chr6 (186-218)||(27332505-27332537)
chr6 (186-218)||(27393245-27393277)
chr6 (72-100)||(35011969-35011997)
[»] chr5 (42 HSPs)
chr5 (12-236)||(18318162-18318385)
chr5 (12-213)||(20765230-20765430)
chr5 (109-217)||(36315392-36315500)
chr5 (92-213)||(22177347-22177467)
chr5 (137-216)||(27988102-27988181)
chr5 (147-231)||(26739779-26739863)
chr5 (149-240)||(31062231-31062320)
chr5 (147-208)||(26731989-26732050)
chr5 (151-213)||(21327423-21327485)
chr5 (193-231)||(8286059-8286097)
chr5 (167-232)||(13096318-13096384)
chr5 (131-213)||(20572730-20572812)
chr5 (149-231)||(22413073-22413154)
chr5 (12-70)||(36508869-36508927)
chr5 (167-231)||(1097339-1097404)
chr5 (149-214)||(23470680-23470745)
chr5 (149-214)||(23476392-23476457)
chr5 (113-217)||(41094814-41094919)
chr5 (149-213)||(40723460-40723524)
chr5 (193-232)||(13026161-13026200)
chr5 (109-231)||(20917149-20917272)
chr5 (186-231)||(32028840-32028885)
chr5 (149-209)||(25573581-25573641)
chr5 (193-236)||(18357200-18357243)
chr5 (193-236)||(22075856-22075899)
chr5 (149-208)||(25576010-25576069)
chr5 (151-214)||(41860580-41860643)
chr5 (193-231)||(20907793-20907831)
chr5 (138-217)||(21740741-21740821)
chr5 (99-232)||(21870783-21870916)
chr5 (99-232)||(21875063-21875196)
chr5 (167-232)||(21985352-21985418)
chr5 (167-232)||(25422404-25422470)
chr5 (167-232)||(25432266-25432332)
chr5 (186-231)||(263965-264009)
chr5 (186-231)||(10732134-10732178)
chr5 (186-231)||(20026055-20026099)
chr5 (186-231)||(22144941-22144985)
chr5 (121-213)||(24068232-24068325)
chr5 (186-231)||(26011219-26011263)
chr5 (164-213)||(40726683-40726732)
chr5 (174-213)||(22106586-22106626)
[»] chr2 (42 HSPs)
chr2 (22-240)||(43138137-43138355)
chr2 (17-232)||(24941456-24941670)
chr2 (92-235)||(23005602-23005744)
chr2 (147-230)||(19672754-19672837)
chr2 (92-213)||(25109720-25109840)
chr2 (92-213)||(23792126-23792246)
chr2 (137-214)||(22458689-22458765)
chr2 (147-213)||(26393308-26393374)
chr2 (109-213)||(27845505-27845609)
chr2 (172-240)||(298017-298085)
chr2 (186-240)||(34401709-34401763)
chr2 (177-236)||(31346135-31346194)
chr2 (147-213)||(18546143-18546209)
chr2 (186-240)||(24899865-24899919)
chr2 (186-240)||(24902342-24902396)
chr2 (186-240)||(24904819-24904873)
chr2 (186-240)||(24907294-24907348)
chr2 (149-213)||(7187412-7187476)
chr2 (109-231)||(6726784-6726907)
chr2 (193-236)||(23653589-23653632)
chr2 (149-231)||(22172962-22173043)
chr2 (102-216)||(23208159-23208272)
chr2 (186-240)||(24897382-24897436)
chr2 (149-213)||(39827195-39827259)
chr2 (174-236)||(23067779-23067842)
chr2 (149-212)||(34137852-34137915)
chr2 (12-70)||(1383778-1383836)
chr2 (174-232)||(20309973-20310031)
chr2 (197-231)||(23286752-23286786)
chr2 (13-70)||(23801362-23801419)
chr2 (186-231)||(25616602-25616647)
chr2 (186-231)||(41523183-41523228)
chr2 (109-213)||(43946518-43946622)
chr2 (12-75)||(14179849-14179912)
chr2 (167-232)||(22337987-22338053)
chr2 (167-232)||(23077310-23077376)
chr2 (165-231)||(26506279-26506344)
chr2 (165-231)||(27919961-27920026)
chr2 (92-216)||(20519318-20519442)
chr2 (186-231)||(24368642-24368687)
chr2 (186-231)||(24528850-24528894)
chr2 (186-231)||(26508778-26508822)
[»] chr4 (53 HSPs)
chr4 (12-213)||(54797886-54798087)
chr4 (12-232)||(14281119-14281338)
chr4 (92-235)||(53081281-53081423)
chr4 (95-213)||(26790190-26790307)
chr4 (149-231)||(51463012-51463094)
chr4 (147-213)||(14852024-14852090)
chr4 (12-70)||(19434785-19434843)
chr4 (186-231)||(43197822-43197867)
chr4 (149-213)||(12611897-12611961)
chr4 (149-213)||(23802406-23802470)
chr4 (193-231)||(12903644-12903682)
chr4 (12-70)||(14549518-14549576)
chr4 (109-213)||(15792642-15792746)
chr4 (149-214)||(26049619-26049684)
chr4 (149-213)||(32306152-32306216)
chr4 (109-231)||(14970010-14970132)
chr4 (164-231)||(52313547-52313614)
chr4 (193-231)||(8847253-8847291)
chr4 (92-213)||(12841495-12841616)
chr4 (172-236)||(13812108-13812173)
chr4 (167-231)||(15091719-15091784)
chr4 (186-231)||(15372067-15372112)
chr4 (186-231)||(15374359-15374404)
chr4 (97-214)||(32852254-32852371)
chr4 (97-213)||(15867870-15867986)
chr4 (109-216)||(16043905-16044013)
chr4 (12-68)||(35660756-35660812)
chr4 (109-231)||(11750-11873)
chr4 (109-215)||(3515744-3515851)
chr4 (186-229)||(15368558-15368601)
chr4 (174-232)||(17053855-17053914)
chr4 (193-236)||(22633418-22633461)
chr4 (193-236)||(24029640-24029683)
chr4 (193-236)||(43255351-43255394)
chr4 (147-231)||(52242401-52242485)
chr4 (138-231)||(11006-11099)
chr4 (172-236)||(3332695-3332761)
chr4 (132-213)||(3838092-3838174)
chr4 (163-213)||(14826012-14826062)
chr4 (193-231)||(23373717-23373755)
chr4 (186-231)||(7640383-7640427)
chr4 (12-69)||(9638877-9638934)
chr4 (109-213)||(15489469-15489574)
chr4 (149-213)||(17334185-17334249)
chr4 (121-213)||(20150828-20150921)
chr4 (164-213)||(22354671-22354720)
chr4 (186-231)||(44616212-44616256)
chr4 (186-231)||(50221535-50221579)
chr4 (149-236)||(155000-155086)
chr4 (174-213)||(14052565-14052605)
chr4 (193-233)||(15123110-15123150)
chr4 (72-100)||(15867994-15868022)
chr4 (186-230)||(16224407-16224451)
[»] scaffold0022 (3 HSPs)
scaffold0022 (12-213)||(117299-117500)
scaffold0022 (92-235)||(128076-128219)
scaffold0022 (162-217)||(81191-81246)
[»] chr3 (66 HSPs)
chr3 (12-213)||(36167400-36167601)
chr3 (12-231)||(21619251-21619469)
chr3 (12-212)||(10551173-10551373)
chr3 (72-231)||(43927917-43928076)
chr3 (138-240)||(23275541-23275643)
chr3 (123-240)||(17738142-17738259)
chr3 (115-240)||(19039454-19039579)
chr3 (109-209)||(28195478-28195578)
chr3 (97-213)||(10557663-10557779)
chr3 (95-213)||(21838308-21838425)
chr3 (92-213)||(45219412-45219531)
chr3 (164-240)||(22146741-22146817)
chr3 (95-231)||(22109464-22109598)
chr3 (186-240)||(24339913-24339967)
chr3 (12-70)||(6805053-6805111)
chr3 (149-231)||(50243799-50243880)
chr3 (97-214)||(14502002-14502119)
chr3 (186-231)||(15471816-15471861)
chr3 (149-213)||(9578533-9578597)
chr3 (149-213)||(11202209-11202273)
chr3 (97-217)||(23412372-23412492)
chr3 (149-217)||(44495524-44495592)
chr3 (109-231)||(13937276-13937399)
chr3 (109-231)||(16282060-16282183)
chr3 (109-231)||(41124676-41124799)
chr3 (92-213)||(12386260-12386381)
chr3 (147-213)||(15207821-15207887)
chr3 (113-214)||(32402181-32402283)
chr3 (159-213)||(53300825-53300879)
chr3 (186-231)||(8899638-8899683)
chr3 (186-231)||(38961139-38961184)
chr3 (177-242)||(43549630-43549695)
chr3 (173-236)||(183954-184018)
chr3 (176-231)||(11299708-11299764)
chr3 (193-233)||(11855610-11855650)
chr3 (172-231)||(20697632-20697692)
chr3 (164-231)||(26054417-26054484)
chr3 (138-217)||(1464629-1464709)
chr3 (193-231)||(12340624-12340662)
chr3 (193-231)||(17346930-17346968)
chr3 (147-216)||(37250314-37250384)
chr3 (186-231)||(2044839-2044883)
chr3 (186-231)||(2047568-2047612)
chr3 (149-213)||(13919756-13919820)
chr3 (152-213)||(16644951-16645012)
chr3 (149-213)||(325066-325130)
chr3 (132-216)||(605519-605603)
chr3 (186-230)||(17444066-17444110)
chr3 (178-218)||(22792179-22792219)
chr3 (149-213)||(24152386-24152450)
chr3 (138-236)||(18439377-18439476)
chr3 (138-232)||(25475568-25475663)
chr3 (167-214)||(45798087-45798134)
chr3 (186-236)||(12851542-12851592)
chr3 (167-236)||(17488729-17488798)
chr3 (167-236)||(17500211-17500280)
chr3 (164-214)||(37641503-37641553)
chr3 (164-213)||(5224325-5224374)
chr3 (172-236)||(12400071-12400135)
chr3 (195-236)||(13209508-13209549)
chr3 (186-231)||(13938282-13938327)
chr3 (12-69)||(14641676-14641733)
chr3 (177-214)||(52465370-52465407)
chr3 (186-231)||(55477413-55477457)
chr3 (193-233)||(11423945-11423985)
chr3 (167-223)||(14576026-14576082)
[»] chr1 (58 HSPs)
chr1 (109-240)||(14294701-14294832)
chr1 (109-240)||(51131404-51131535)
chr1 (92-213)||(50687442-50687562)
chr1 (97-213)||(21342927-21343043)
chr1 (97-213)||(21347792-21347908)
chr1 (92-217)||(27652388-27652512)
chr1 (92-235)||(50613217-50613360)
chr1 (92-235)||(50621045-50621188)
chr1 (93-216)||(16093018-16093141)
chr1 (92-213)||(16381965-16382087)
chr1 (92-213)||(43629297-43629416)
chr1 (109-213)||(15859317-15859420)
chr1 (172-237)||(20919478-20919544)
chr1 (186-240)||(48444416-48444470)
chr1 (92-213)||(48521342-48521463)
chr1 (148-213)||(21683883-21683948)
chr1 (173-240)||(20926601-20926669)
chr1 (149-213)||(52940027-52940091)
chr1 (149-213)||(13880538-13880602)
chr1 (149-213)||(20959017-20959081)
chr1 (177-236)||(45573997-45574056)
chr1 (12-70)||(7052139-7052197)
chr1 (12-70)||(17901928-17901986)
chr1 (186-236)||(52927230-52927279)
chr1 (186-231)||(21473819-21473864)
chr1 (149-214)||(22125186-22125251)
chr1 (147-231)||(22777347-22777431)
chr1 (186-231)||(40129706-40129751)
chr1 (149-213)||(20453636-20453700)
chr1 (109-216)||(35260277-35260385)
chr1 (92-214)||(12272420-12272540)
chr1 (201-240)||(16696629-16696668)
chr1 (149-216)||(21042502-21042569)
chr1 (12-75)||(21243858-21243921)
chr1 (109-231)||(22122149-22122272)
chr1 (109-231)||(41230922-41231045)
chr1 (12-70)||(24723586-24723644)
chr1 (128-213)||(47191467-47191553)
chr1 (195-236)||(27249919-27249960)
chr1 (121-213)||(40390153-40390246)
chr1 (92-216)||(41049169-41049293)
chr1 (186-218)||(22921064-22921096)
chr1 (193-229)||(33681909-33681945)
chr1 (132-213)||(13212192-13212274)
chr1 (163-213)||(14801392-14801442)
chr1 (163-213)||(14810266-14810316)
chr1 (12-70)||(21239169-21239227)
chr1 (194-236)||(23818490-23818532)
chr1 (148-233)||(26065847-26065932)
chr1 (138-217)||(35980885-35980965)
chr1 (12-69)||(8276117-8276174)
chr1 (186-231)||(16759618-16759662)
chr1 (164-213)||(22130026-22130075)
chr1 (12-69)||(38056800-38056857)
chr1 (172-232)||(50209398-50209459)
chr1 (72-100)||(27652515-27652543)
chr1 (193-229)||(33798376-33798412)
chr1 (72-100)||(50687411-50687439)
[»] scaffold0184 (1 HSPs)
scaffold0184 (109-240)||(220-351)
[»] scaffold0123 (1 HSPs)
scaffold0123 (68-235)||(25895-26072)
[»] scaffold0008 (1 HSPs)
scaffold0008 (134-223)||(72551-72640)
[»] scaffold0114 (2 HSPs)
scaffold0114 (147-240)||(46215-46308)
scaffold0114 (174-236)||(14655-14718)
[»] scaffold0090 (1 HSPs)
scaffold0090 (92-213)||(2863-2983)
[»] scaffold0139 (1 HSPs)
scaffold0139 (92-235)||(39168-39311)
[»] scaffold0601 (1 HSPs)
scaffold0601 (103-213)||(7518-7627)
[»] scaffold0420 (1 HSPs)
scaffold0420 (92-236)||(5437-5581)
[»] scaffold1403 (1 HSPs)
scaffold1403 (92-216)||(1371-1494)
[»] scaffold0076 (1 HSPs)
scaffold0076 (92-218)||(22494-22619)
[»] scaffold0138 (2 HSPs)
scaffold0138 (92-213)||(17365-17486)
scaffold0138 (186-218)||(13806-13838)
[»] scaffold1419 (1 HSPs)
scaffold1419 (92-213)||(887-1008)
[»] scaffold0001 (3 HSPs)
scaffold0001 (92-226)||(84443-84575)
scaffold0001 (149-213)||(447401-447465)
scaffold0001 (149-213)||(498311-498375)
[»] scaffold0007 (3 HSPs)
scaffold0007 (151-240)||(163530-163619)
scaffold0007 (149-240)||(160251-160342)
scaffold0007 (95-213)||(17107-17225)
[»] scaffold0914 (1 HSPs)
scaffold0914 (147-213)||(2630-2696)
[»] scaffold0098 (1 HSPs)
scaffold0098 (97-231)||(29564-29698)
[»] scaffold0014 (3 HSPs)
scaffold0014 (152-217)||(79301-79367)
scaffold0014 (147-231)||(203522-203607)
scaffold0014 (74-160)||(78904-78989)
[»] scaffold0320 (1 HSPs)
scaffold0320 (138-227)||(12838-12927)
[»] scaffold0009 (2 HSPs)
scaffold0009 (137-214)||(86435-86511)
scaffold0009 (109-214)||(191797-191902)
[»] scaffold0106 (3 HSPs)
scaffold0106 (103-209)||(18857-18963)
scaffold0106 (174-235)||(2155-2217)
scaffold0106 (174-235)||(8132-8194)
[»] scaffold0072 (2 HSPs)
scaffold0072 (92-214)||(62330-62450)
scaffold0072 (163-213)||(58735-58785)
[»] scaffold0256 (1 HSPs)
scaffold0256 (12-66)||(1971-2025)
[»] scaffold0004 (2 HSPs)
scaffold0004 (147-213)||(333223-333289)
scaffold0004 (12-70)||(66205-66263)
[»] scaffold0261 (3 HSPs)
scaffold0261 (102-231)||(17450-17579)
scaffold0261 (193-239)||(16556-16602)
scaffold0261 (72-100)||(17592-17620)
[»] scaffold0046 (4 HSPs)
scaffold0046 (193-240)||(11866-11913)
scaffold0046 (193-240)||(15376-15423)
scaffold0046 (109-213)||(16085-16190)
scaffold0046 (109-213)||(25272-25377)
[»] scaffold0169 (1 HSPs)
scaffold0169 (147-213)||(28696-28762)
[»] scaffold0162 (1 HSPs)
scaffold0162 (138-236)||(25453-25550)
[»] scaffold0040 (4 HSPs)
scaffold0040 (186-240)||(13006-13060)
scaffold0040 (149-216)||(23105-23171)
scaffold0040 (92-233)||(102769-102910)
scaffold0040 (151-208)||(14250-14307)
[»] scaffold0029 (1 HSPs)
scaffold0029 (186-240)||(12211-12265)
[»] scaffold0347 (2 HSPs)
scaffold0347 (132-213)||(9772-9853)
scaffold0347 (172-236)||(904-969)
[»] scaffold0011 (2 HSPs)
scaffold0011 (132-213)||(37283-37364)
scaffold0011 (193-231)||(167174-167212)
[»] scaffold1835 (1 HSPs)
scaffold1835 (149-213)||(195-259)
[»] scaffold0145 (1 HSPs)
scaffold0145 (149-213)||(10725-10789)
[»] scaffold0012 (1 HSPs)
scaffold0012 (109-213)||(220334-220436)
[»] scaffold0005 (2 HSPs)
scaffold0005 (137-213)||(268545-268621)
scaffold0005 (163-213)||(13647-13697)
[»] scaffold0247 (1 HSPs)
scaffold0247 (138-240)||(17218-17321)
[»] scaffold0051 (1 HSPs)
scaffold0051 (164-231)||(32145-32212)
[»] scaffold0357 (3 HSPs)
scaffold0357 (92-213)||(4796-4917)
scaffold0357 (95-232)||(14005-14142)
scaffold0357 (137-216)||(15325-15405)
[»] scaffold0149 (1 HSPs)
scaffold0149 (12-70)||(21408-21466)
[»] scaffold0130 (1 HSPs)
scaffold0130 (112-231)||(888-1008)
[»] scaffold1439 (1 HSPs)
scaffold1439 (149-217)||(1062-1130)
[»] scaffold0016 (2 HSPs)
scaffold0016 (109-231)||(185006-185129)
scaffold0016 (193-236)||(206730-206773)
[»] scaffold0010 (4 HSPs)
scaffold0010 (149-212)||(7197-7260)
scaffold0010 (167-231)||(130780-130845)
scaffold0010 (137-216)||(59883-59963)
scaffold0010 (149-214)||(1545-1610)
[»] scaffold1842 (1 HSPs)
scaffold1842 (193-231)||(244-282)
[»] scaffold0750 (1 HSPs)
scaffold0750 (147-213)||(4523-4589)
[»] scaffold0112 (1 HSPs)
scaffold0112 (149-231)||(23107-23188)
[»] scaffold0107 (1 HSPs)
scaffold0107 (147-213)||(13552-13618)
[»] scaffold0026 (2 HSPs)
scaffold0026 (12-70)||(21990-22048)
scaffold0026 (193-231)||(39115-39153)
[»] scaffold1137 (1 HSPs)
scaffold1137 (167-231)||(1514-1579)
[»] scaffold0293 (1 HSPs)
scaffold0293 (164-236)||(19276-19349)
[»] scaffold0228 (3 HSPs)
scaffold0228 (167-231)||(5352-5417)
scaffold0228 (167-231)||(12934-12999)
scaffold0228 (167-231)||(22886-22951)
[»] scaffold0142 (1 HSPs)
scaffold0142 (167-236)||(1613-1682)
[»] scaffold0084 (1 HSPs)
scaffold0084 (167-231)||(11029-11094)
[»] scaffold0021 (1 HSPs)
scaffold0021 (167-231)||(63404-63469)
[»] scaffold1434 (1 HSPs)
scaffold1434 (167-234)||(111-179)
[»] scaffold0686 (1 HSPs)
scaffold0686 (94-213)||(2113-2232)
[»] scaffold0627 (1 HSPs)
scaffold0627 (193-233)||(803-843)
[»] scaffold0394 (1 HSPs)
scaffold0394 (149-213)||(13036-13100)
[»] scaffold0319 (1 HSPs)
scaffold0319 (172-231)||(12242-12302)
[»] scaffold0290 (1 HSPs)
scaffold0290 (149-213)||(1060-1124)
[»] scaffold0217 (2 HSPs)
scaffold0217 (176-231)||(15020-15076)
scaffold0217 (193-227)||(15419-15453)
[»] scaffold0200 (1 HSPs)
scaffold0200 (164-236)||(18596-18668)
[»] scaffold0192 (1 HSPs)
scaffold0192 (167-239)||(10783-10854)
[»] scaffold0125 (1 HSPs)
scaffold0125 (149-213)||(1051-1115)
[»] scaffold0117 (2 HSPs)
scaffold0117 (164-236)||(42674-42746)
scaffold0117 (177-213)||(40219-40255)
[»] scaffold0083 (1 HSPs)
scaffold0083 (149-213)||(42283-42347)
[»] scaffold0044 (1 HSPs)
scaffold0044 (147-215)||(4670-4738)
[»] scaffold0535 (1 HSPs)
scaffold0535 (109-231)||(7521-7643)
[»] scaffold0456 (1 HSPs)
scaffold0456 (174-232)||(9620-9679)
[»] scaffold0413 (1 HSPs)
scaffold0413 (110-231)||(13459-13581)
[»] scaffold0108 (1 HSPs)
scaffold0108 (149-216)||(4018-4085)
[»] scaffold1401 (1 HSPs)
scaffold1401 (167-232)||(1672-1738)
[»] scaffold0676 (1 HSPs)
scaffold0676 (12-70)||(2682-2740)
[»] scaffold0598 (1 HSPs)
scaffold0598 (174-232)||(247-305)
[»] scaffold0594 (1 HSPs)
scaffold0594 (12-70)||(2108-2166)
[»] scaffold0439 (1 HSPs)
scaffold0439 (164-214)||(12397-12447)
[»] scaffold0389 (1 HSPs)
scaffold0389 (193-231)||(12842-12880)
[»] scaffold0268 (1 HSPs)
scaffold0268 (193-231)||(140-178)
[»] scaffold0180 (3 HSPs)
scaffold0180 (92-213)||(33669-33790)
scaffold0180 (149-213)||(31370-31434)
scaffold0180 (72-100)||(33793-33821)
[»] scaffold0088 (1 HSPs)
scaffold0088 (193-231)||(21761-21799)
[»] scaffold0006 (4 HSPs)
scaffold0006 (92-213)||(97878-97999)
scaffold0006 (92-213)||(107156-107277)
scaffold0006 (72-100)||(97847-97875)
scaffold0006 (72-100)||(107125-107153)
[»] scaffold0333 (2 HSPs)
scaffold0333 (186-231)||(7505-7549)
scaffold0333 (186-231)||(14885-14929)
[»] scaffold0163 (1 HSPs)
scaffold0163 (159-231)||(26395-26467)
[»] scaffold0124 (1 HSPs)
scaffold0124 (167-236)||(23828-23897)
[»] scaffold0053 (1 HSPs)
scaffold0053 (186-231)||(60751-60796)
[»] scaffold0877 (1 HSPs)
scaffold0877 (149-213)||(2028-2092)
[»] scaffold0037 (1 HSPs)
scaffold0037 (149-217)||(82984-83052)
[»] scaffold0695 (1 HSPs)
scaffold0695 (109-213)||(6787-6893)
[»] scaffold0480 (1 HSPs)
scaffold0480 (163-214)||(10337-10388)
[»] scaffold0346 (1 HSPs)
scaffold0346 (174-236)||(16903-16966)
[»] scaffold0266 (1 HSPs)
scaffold0266 (193-232)||(18141-18180)
[»] scaffold0243 (1 HSPs)
scaffold0243 (176-231)||(5307-5361)
[»] scaffold0221 (1 HSPs)
scaffold0221 (193-236)||(11988-12031)
[»] scaffold0113 (1 HSPs)
scaffold0113 (174-232)||(32930-32989)
[»] scaffold0101 (2 HSPs)
scaffold0101 (162-235)||(8138-8213)
scaffold0101 (147-213)||(476-542)
[»] scaffold0100 (1 HSPs)
scaffold0100 (193-236)||(21011-21054)
[»] scaffold0059 (1 HSPs)
scaffold0059 (193-236)||(19693-19735)
[»] scaffold0056 (1 HSPs)
scaffold0056 (193-232)||(16396-16435)
[»] scaffold0042 (1 HSPs)
scaffold0042 (109-231)||(43150-43273)
[»] scaffold0034 (1 HSPs)
scaffold0034 (138-236)||(33337-33435)
[»] scaffold0028 (1 HSPs)
scaffold0028 (174-213)||(128169-128208)
[»] scaffold0730 (1 HSPs)
scaffold0730 (12-70)||(6630-6688)
[»] scaffold0490 (1 HSPs)
scaffold0490 (174-231)||(2798-2856)
[»] scaffold0422 (1 HSPs)
scaffold0422 (186-232)||(3985-4031)
[»] scaffold0417 (1 HSPs)
scaffold0417 (183-213)||(551-581)
[»] scaffold0218 (1 HSPs)
scaffold0218 (190-232)||(28464-28506)
[»] scaffold0161 (1 HSPs)
scaffold0161 (190-232)||(1629-1671)
[»] scaffold0080 (1 HSPs)
scaffold0080 (167-232)||(44797-44863)
[»] scaffold0077 (1 HSPs)
scaffold0077 (147-213)||(54812-54878)
[»] scaffold0075 (1 HSPs)
scaffold0075 (138-231)||(50729-50822)
[»] scaffold0064 (1 HSPs)
scaffold0064 (193-239)||(47778-47824)
[»] scaffold0047 (1 HSPs)
scaffold0047 (163-213)||(22822-22872)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-235)||(37681-37723)
[»] scaffold2004 (1 HSPs)
scaffold2004 (186-231)||(37-81)
[»] scaffold1296 (1 HSPs)
scaffold1296 (164-213)||(2047-2096)
[»] scaffold1052 (1 HSPs)
scaffold1052 (172-236)||(142-206)
[»] scaffold0621 (1 HSPs)
scaffold0621 (186-231)||(9437-9481)
[»] scaffold0494 (1 HSPs)
scaffold0494 (109-213)||(36-141)
[»] scaffold0323 (1 HSPs)
scaffold0323 (186-231)||(11889-11934)
[»] scaffold0305 (1 HSPs)
scaffold0305 (172-236)||(21280-21344)
[»] scaffold0273 (1 HSPs)
scaffold0273 (176-217)||(8636-8677)
[»] scaffold0231 (1 HSPs)
scaffold0231 (186-231)||(11298-11342)
[»] scaffold0122 (1 HSPs)
scaffold0122 (186-231)||(33820-33864)
[»] scaffold0120 (1 HSPs)
scaffold0120 (121-213)||(29314-29407)
[»] scaffold0074 (1 HSPs)
scaffold0074 (177-214)||(9123-9160)
[»] scaffold0555 (1 HSPs)
scaffold0555 (193-233)||(9750-9789)
[»] scaffold0057 (1 HSPs)
scaffold0057 (177-213)||(72445-72481)
[»] scaffold0054 (1 HSPs)
scaffold0054 (177-213)||(75025-75061)
[»] scaffold0032 (1 HSPs)
scaffold0032 (174-229)||(52447-52503)
[»] scaffold0031 (1 HSPs)
scaffold0031 (178-233)||(52253-52309)
[»] scaffold0020 (1 HSPs)
scaffold0020 (186-218)||(15045-15077)


Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 10063084 - 10062865
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  10063084 gattattctacaacatgaacaccacctattactttaattcatcaaattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 10062985  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062984 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 10062885  T
Q  212 tagaatatgaaaatcgcagc 231  Q
    ||||||| ||||||||||||    
T  10062884 tagaataagaaaatcgcagc 10062865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 48274352 - 48274553
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||    
T  48274352 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttctacatcaatctaataatttttcatcaattcctcactttaa 48274451  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48274452 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttgataagattgaatgttagtctcacccttacct 48274551  T
Q  212 ta 213  Q
    ||    
T  48274552 ta 48274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 62 - 232
Target Start/End: Original strand, 3387367 - 3387536
Alignment:
Q  62 ctactctttttacatcaatctaacaatttttcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaat 161  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3387367 ctactctttcaacatcaatctaacaatttttcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaat 3387466  T
Q  162 catcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  3387467 catcagaattacggacttaataagattgaatgttagtctcacccttaccttataagatg-aaatcgcagcc 3387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 16496241 - 16496372
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  16496241 taaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccctta 16496340  T
Q  209 ccttagaatatgaaaatcgcagcctctatgtg 240  Q
     ||||||||| |||||||||||||||||||||    
T  16496341 tcttagaataagaaaatcgcagcctctatgtg 16496372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 9176956 - 9176835
Alignment:
Q  92 tcatcaattcctcactct-aaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||| ||||||| ||||||||| ||||||| ||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||    
T  9176956 tcatcaattc-tcactcttaaccctaatcctcaaattctctaaaactaatcctacacttgttaaatttaattatcagaattacagacttaataaaattga 9176858  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| |||||||||||||||||||    
T  9176857 atgctagtctcacccttacctta 9176835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 1867353 - 1867211
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||||||||| ||||| | |||||| |||  || ||||||||||| || ||||||||||  ||  |||||||||||||||||||||||||||||    
T  1867353 tcatcaattcctcactttaacc-tgattctccaattgtctaaaactaatcctacacttgttaaatacaactatcagaattacagacttaataagattgaa 1867255  T
Q  192 tgttagtctcacccttacctt-agaatatgaaaatcgcagcctct 235  Q
    ||||||||||  ||||||||| ||||| || ||||||||||||||    
T  1867254 tgttagtctcgtccttaccttaagaatttg-aaatcgcagcctct 1867211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 14037049 - 14037169
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||||||||| ||||| |||||||| | |  || ||||||||||| || ||||||||||  || ||||||||||||||||||||||  ||||||    
T  14037049 tcatcaattcctcactttaacc-taattctccatttttctaaaactaatcctacacttgttaaatacaaccatcagaattacagacttaatagaattgaa 14037147  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||||||||||||    
T  14037148 tgctagtctcacccttacctta 14037169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 14347079 - 14347199
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||||||||| ||||| |||||||| | |  || ||||||||||| || ||||||||||  || ||||||||||||||||||||||  ||||||    
T  14347079 tcatcaattcctcactttaacc-taattctccatttttctaaaactaatcctacacttgttaaatacaaccatcagaattacagacttaatagaattgaa 14347177  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||||||||||||    
T  14347178 tgctagtctcacccttacctta 14347199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 16324802 - 16324922
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctc-caaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | || | ||| |||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  16324802 tcatcaattcctcactttaacc-taattctccaa-cttctctaaattaatcctacacttgttaaatt-aatcatcagaagtacagacttaataagattga 16324898  T
Q  191 atgttagtctcacccttaccttag 214  Q
    ||| ||||||||||||||||||||    
T  16324899 atgctagtctcacccttaccttag 16324922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 14045621 - 14045741
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||||||||| ||||| |||||||| |||  || ||||||||||| || |||||||| |  || ||||||||||||||||||||||  ||||||    
T  14045621 tcatcaattcctcactttaacc-taattctccaattttctaaaactaatcctacacttgttaagtacaaccatcagaattacagacttaatagaattgaa 14045719  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||| ||||||||    
T  14045720 tgctagtctcacctttacctta 14045741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 14355651 - 14355771
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||||||||| ||||| |||||||| |||  || ||||||||||| || |||||||| |  || ||||||||||||||||||||||  ||||||    
T  14355651 tcatcaattcctcactttaacc-taattctccaattttctaaaactaatcctacacttgttaagtacaaccatcagaattacagacttaatagaattgaa 14355749  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||| ||||||||    
T  14355750 tgctagtctcacctttacctta 14355771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 15117364 - 15117440
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  15117364 taatcctacacttgttaaatt-aatcatcagaagtacagacttaataagattgaatgctagtctcacccttaccttag 15117440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 15113848 - 15113914
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  15113848 cttgttaaatt-aatcatcagaagtacagacttaataagattgaatgctagtctcacccttaccttag 15113914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 12754849 - 12754791
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  12754849 gattattctacaacctgaacaccaattattactttaattcatcagattacctactcttt 12754791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 11768171 - 11768090
Alignment:
Q  132 aaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| || || | |||||||| ||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||    
T  11768171 aaaactaaacctacacatgttaaatctaatcatcagaattataggcttaagaagattgaatgttagtcccacccttacctta 11768090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 1856450 - 1856383
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  1856450 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaatgtgaaaatcgcagc 1856383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 13917622 - 13917555
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  13917622 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaatgtgaaaatcgcagc 13917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 37793458 - 37793392
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| |||||||||||||||  | ||||| ||||||||||||||||| |||||||||||||    
T  37793458 cttgttaaatctaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 37793392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 68597 - 68662
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||||||| |||||||||||||    
T  68597 gaatcacagacttaataaaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 68662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 42462859 - 42462924
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  42462859 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 42462924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 16997080 - 16997144
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  16997080 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 16997144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 10589664 - 10589707
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  10589664 gttagtctcacccttaccttagaatgtgaaaatcgcagcctcta 10589707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 17180571 - 17180529
Alignment:
Q  171 tacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  17180571 tacagacttaataagattgaatgctagtctcacccttacctta 17180529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 9750797 - 9750728
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||| ||||||  |||| ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  9750797 gaattacagaattaatagaattgtatggtagtctcacccttaccttaaagaatgaaaatcgcagcctcta 9750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 18304654 - 18304723
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||| ||||||  |||| ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  18304654 gaattacagaattaatagaattgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcctcta 18304723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 47832692 - 47832744
Alignment:
Q  178 ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  47832692 ttaataaaattgaatgttagtctcacccttaccttagaat-tcaaaatcgcagc 47832744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 17052826 - 17052762
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||| |||||  | ||||| ||||||||||||||||| |||||||||||||    
T  17052826 tgttaaatctaatcatcaaaattatcggcttaagaagattgaatgttagtcccacccttacctta 17052762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 11973092 - 11973215
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  11973092 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 11973191  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| ||||| |||||    
T  11973192 accttggaatataaaaattgcagc 11973215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 16057170 - 16057268
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| || |||| |||||  |||||||||||||| | | |||||||  |||| | ||||||||||||||||||||||||||  ||||||||||||||||    
T  16057170 aatcctacacttgctaaatacaatcatcagaattatatagcttaatagaattgtaagttagtctcacccttaccttagaata-aaaaatcgcagcctcta 16057268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 13648284 - 13648350
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcag 230  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||||||  ||||||| ||||    
T  13648284 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaagtgaaaattgcag 13648350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 15007767 - 15007646
Alignment:
Q  95 tcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatg 193  Q
    |||||| |||||| |||||||||||  ||| | ||| |||  |||||| || ||||||||||  || ||||||||||| | | |||||||  ||||||||    
T  15007767 tcaatttctcactttaaccctaatttccaacttctctaaat-taatcctacacttgttaaatacaaccatcagaattatacaacttaatagaattgaatg 15007669  T
Q  194 ttagtctcacccttaccttagaa 216  Q
     ||||||||||||||||||||||    
T  15007668 ctagtctcacccttaccttagaa 15007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 47975075 - 47975017
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| |||||||||| ||||| ||| |||||    
T  47975075 gattattctacaacctgaacaccaattattaccttaattcatcggattacctaatcttt 47975017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12902216 - 12902340
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||| ||| ||| ||||  ||||| || ||||| ||||  || |||| |||||| | | |||||||  |||||||| |||||||||||||    
T  12902216 taaccctaattctccaattctctaaaatcaatcctacacttgtcaaatacaaccatccgaattatatagcttaatagaattgaatgctagtctcaccctt 12902315  T
Q  208 accttagaatatgaaaatcgcagcct 233  Q
    |||||| || || |||||||||||||    
T  12902316 accttataa-atcaaaatcgcagcct 12902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 16092396 - 16092441
Alignment:
Q  169 attacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||    
T  16092396 attacagacttaataagaatgaatactagtctcacccttaccttag 16092441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 39262757 - 39262692
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||||||    
T  39262757 acagacttaatagaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 39262692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 18455654 - 18455590
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | |  ||||| ||||||||||||||||| |||||||||||||    
T  18455654 tgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtcccacccttacctta 18455590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 38519674 - 38519738
Alignment:
Q  152 taaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    ||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||||| |||||    
T  38519674 taaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccatagaa 38519738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 810416 - 810334
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||  |||| ||||||||||||  |||| ||  |||||||||||||||||||||||| |||||||| ||||    
T  810416 tgttaaatctaatcatt-gaatcacagacttaatagaattgcaaaattagtctcacccttaccttagaatgtgaaaatcacagc 810334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 11995280 - 11995237
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |||  |||||||||||||||||    
T  11995280 gttagtctcacccttaccttataatcagaaaatcgcagcctcta 11995237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 21189030 - 21188907
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||  |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  ||| |||||||||| |||||||    
T  21189030 taaccctaattctcaaattctaaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattaaatgttagtcccaccctt 21188931  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  21188930 accttggaatataaaaatcgcagc 21188907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 25926349 - 25926278
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacc-ttagaatatgaaaatcgcagcctc 234  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||| ||| |  |||||||||||||||||    
T  25926349 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctttaaagaatgaaaatcgcagcctc 25926278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 26212884 - 26212926
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  26212884 gttagtctcacccttaccttagaatgtg-aaatcgcagcctcta 26212926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 40444256 - 40444315
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| || ||||||||||||||||| ||| |  |||||||||||||||    
T  40444256 agacttaataagattgcaaagttagtctcacccttactttaaagaatgaaaatcgcagcc 40444315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 42374354 - 42374303
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttaga 215  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||||    
T  42374354 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 42374303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 11524865 - 11524799
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||| ||||| ||||| | ||||||| |  ||||| || ||||||||||||||||||||||||||||    
T  11524865 cttgctaaatctaatctttagaattataagcttaagaaaattgaatgttagtctcacccttacctta 11524799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 15141308 - 15141218
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcg 227  Q
    ||||| || |||| ||||| | ||||||||||||||| | |||||||  |||  | ||||||||||||||||||||||||  |||||||||    
T  15141308 aatcctacacttgctaaatatgatcatcagaattacatagcttaatagaattataagttagtctcacccttaccttagaaagtgaaaatcg 15141218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 15440214 - 15440252
Alignment:
Q  178 ttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  15440214 ttaataaaattgaatgctagtctcacccttaccttagaa 15440252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 16385501 - 16385443
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||| |||| || ||||||||||||||||||||| |  ||||||||||||||    
T  16385501 agacttaataaaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagc 16385443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19282914 - 19282972
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| |||| |||| ||||||| ||| |||||| ||||| |||||||||    
T  19282914 gattattctacaacctgaagaccaattattaccttagttcatcggattacctactcttt 19282972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 19486022 - 19485972
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  19486022 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 19485972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 130006 - 129942
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||||||||| | |  ||||| | ||||||||||||||| ||||||||||||||    
T  130006 tgttaaatctaatcatcagaatcataagcttaaga-gattgaatgttagtcccacccttaccttag 129942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 9512209 - 9512273
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || |||||||||||||||||||||  | |||||||||||||||||||    
T  9512209 acagacttaatagaattgcaaagttagtctcacccttacctta-tagatgaaaatcgcagcctcta 9512273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 12699635 - 12699695
Alignment:
Q  176 acttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||| |||| || |||||||||||||||||||||  | |||||||||||||||||||    
T  12699635 acttaataaaattgcaaagttagtctcacccttacctta-tagatgaaaatcgcagcctcta 12699695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 17016661 - 17016597
Alignment:
Q  149 tgttaaatttaatcatcagaatta-cagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| ||| ||||| |  |||||||| |||||||||||||||||||    
T  17016661 tgttaaatctaatcatcagaattatcag-cttaagagaattgaatgctagtctcacccttacctta 17016597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 38295470 - 38295527
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctt 69  Q
    |||||||||||| | ||||||||| ||||||| ||| |||||| ||||| ||||||||    
T  38295470 gattattctacatcctgaacaccaattattaccttacttcatcggattacctactctt 38295527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 14948371 - 14948316
Alignment:
Q  175 gacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||  |||||||||||||| |||||||||||||  | ||||||||||||||    
T  14948371 gacttaatattattgaatgttagtcccacccttacctta-tagatgaaaatcgcagc 14948316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 16584035 - 16584095
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||  |||| || ||||||||||||||||||||| |  ||||||||||||||    
T  16584035 acagacttaatagaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagc 16584095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 27847086 - 27847030
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgca 229  Q
    |||||||||||||||| || ||||||||||||||||||||  |  ||||||||||||    
T  27847086 agacttaataagattgcaaagttagtctcacccttaccttgtatgatgaaaatcgca 27847030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 26222532 - 26222313
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  26222532 gattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 26222433  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26222432 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 26222333  T
Q  212 tagaatatgaaaatcgcagcc 232  Q
    || || ||| |||||||||||    
T  26222332 tataagatg-aaatcgcagcc 26222313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 26220421 - 26220640
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||    
T  26220421 gattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaatttctcactttaa 26220520  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26220521 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 26220620  T
Q  212 tagaatatgaaaatcgcagcc 232  Q
    || || ||| |||||||||||    
T  26220621 tataagatg-aaatcgcagcc 26220640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 13507298 - 13507205
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13507298 cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 13507205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 13596830 - 13596737
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13596830 cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 13596737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 24353896 - 24354038
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||  ||||| |||||||||||| ||| |||||||| |  || |||||||||||||||||||||||||||||||||||||||||||||    
T  24353896 tcatcaatttctcaccttaacc-taattctcaaattctctaaaactaaccatacacttgttaaatttaatcatcagaattacagacttaataagattgaa 24353994  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    || |||||||||||||||||||||| || |||||||||| ||||    
T  24353995 tgctagtctcacccttaccttagaaaatcaaaatcgcagtctct 24354038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 40492149 - 40492027
Alignment:
Q  92 tcatcaattcctcactct-aaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||| ||||||| ||||||||||||||||| ||| |||| |||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  40492149 tcatcaattc-tcactcttaaccctaattctcaaattctctaaaattaatcctacacttgttaaatttaatcatcaaaattacagacttaataagattga 40492051  T
Q  191 atgttagtctcacccttaccttag 214  Q
    ||| ||||||||||||||||||||    
T  40492050 atgctagtctcacccttaccttag 40492027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 22365508 - 22365609
Alignment:
Q  115 taattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||||||| ||| ||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22365508 taattctcaaattctctaaaatcaatcctacacttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttag 22365607  T
Q  215 aa 216  Q
    ||    
T  22365608 aa 22365609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 17266264 - 17266122
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||||||  ||| | ||| ||||| ||||| || ||||||||||  || ||||||||||||||| ||||||||||||||    
T  17266264 tcatcaatttctcactttaaccctaatttccaacttctctaaaac-aatcctacacttgttaaatacaaccatcagaattacagatttaataagattgaa 17266166  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||    
T  17266165 tgttagtctcacccttaccttagaaaatcgaaatcgcagcctct 17266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 14102471 - 14102352
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctc-caaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | || | ||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  14102471 tcatcaattcctcactttaacc-taattctccaa-cttcgctaaattaatcctacacttgttaaatt-aatcatcagaattacagacttaataagattga 14102375  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| |||||||||||||||||||    
T  14102374 atgctagtctcacccttacctta 14102352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 22966813 - 22966933
Alignment:
Q  121 tcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatat 219  Q
    |||||| ||| ||||| ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| ||||||||||||||||||||||||     
T  22966813 tcaaattctctaaaaccaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttagaataa 22966912  T
Q  220 gaaaatcgcagcctctatgtg 240  Q
    |||||||||||||||||||||    
T  22966913 gaaaatcgcagcctctatgtg 22966933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 2418122 - 2418003
Alignment:
Q  92 tcatcaattcctcactct-aaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| ||||||| || ||| |||||| |||||||||||||||||  | ||| || |||||    
T  2418122 tcatcaattc-tcactcttaaccctaattctcaaattctccaaa-ctaatcctacactttttaaatctaatcatcagaattaca-tcataagaaaattga 2418026  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| |||||||||||||||||||    
T  2418025 atgctagtctcacccttacctta 2418003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 19936343 - 19936240
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccac-ccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | |||||||  ||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  19936343 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacagacttaatagaattgaatgctagtctcaccctt 19936246  T
Q  208 acctta 213  Q
    ||||||    
T  19936245 acctta 19936240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 39834559 - 39834605
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39834559 gaattacagacttaataagattgaatgttagtctcacccttacctta 39834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 22984532 - 22984612
Alignment:
Q  131 caaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||| || || | |||||||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||    
T  22984532 caaaactaaacctacacatgttaaatctaatcatcagaatcaaaggcttaagaagattgaatgttagtctcacccttacct 22984612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 234
Target Start/End: Complemental strand, 19800743 - 19800609
Alignment:
Q  99 ttcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagt 198  Q
    |||||| || |||||||||||||||||| ||| ||||  ||||| || |||||||| |  || ||   ||||||| || ||||||  |||||||||||||    
T  19800743 ttcctctctttaaccctaattctcaaattctctaaaatcaatcctacacttgttaattacaaccaattgaattacggaattaatagaattgaatgttagt 19800644  T
Q  199 ctcacccttaccttagaatatgaaaatcgcagcctc 234  Q
    |||||||||||||||||||   ||||||||||||||    
T  19800643 ctcacccttaccttagaat-caaaaatcgcagcctc 19800609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 21491883 - 21491930
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21491883 gttagtctcacacttaccttagaatatgaaaatcgcagcctctatgtg 21491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 32810431 - 32810554
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  32810431 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 32810530  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    |||||||||||| |||||||||||    
T  32810531 accttagaatataaaaatcgcagc 32810554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 6760129 - 6760199
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||| ||||||||||||  |||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  6760129 gaatcacagacttaatagaattgcaaagttagtctcactcttaccttagaatatgaaaatcgcagcctcta 6760199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 28398436 - 28398540
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| |||| || |||||||||||||| ||  | |||||| | ||||||||||||| | || ||||| || ||||||||||||||||||||||    
T  28398436 taaccctaattttcaattc-tccaaaactaatcctacaacatgttaattctaatcatcagaatcataggcttaagaaaattgaatgttagtctcaccctt 28398534  T
Q  208 acctta 213  Q
    ||||||    
T  28398535 acctta 28398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 14396960 - 14396888
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||| |  |||||||||||||||||||    
T  14396960 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaaagaatgaaaatcgcagcctcta 14396888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 20501294 - 20501230
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  20501294 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 22245341 - 22245234
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| |||||| ||| |||||||| || ||  | |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||    
T  22245341 taaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctt 22245243  T
Q  208 accttagaa 216  Q
    |||||||||    
T  22245242 accttagaa 22245234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 22252419 - 22252312
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| |||||| ||| |||||||| || ||  | |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||    
T  22252419 taaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctt 22252321  T
Q  208 accttagaa 216  Q
    |||||||||    
T  22252320 accttagaa 22252312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 22996699 - 22996763
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||| ||| | || ||||| |||||||||||||||||||||||||||||||    
T  22996699 tgttaaatctaatcatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta 22996763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 17438785 - 17438643
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccac-ccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    ||||||||| |||||| ||||| |||||||||||| |||  |||||||||| ||  ||||||||||   | ||||||||| | ||||||||||  |||||    
T  17438785 tcatcaatttctcactttaacc-taattctcaaattctcacaaactaatcctacaacttgttaaatacgaccatcagaatcatagacttaatagaattga 17438687  T
Q  191 atgttagtctcacccttaccttagaatatgaaaatcgcagcctc 234  Q
    ||| |||||||| ||||||||||  | ||  |||||||||||||    
T  17438686 atgctagtctcaaccttaccttaagaaatcgaaatcgcagcctc 17438643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 20404016 - 20404139
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||||| |||| ||| |||||||| || ||  | ||||||||  ||| |||||||| | ||||| || |  |||||||||||||| |||||||    
T  20404016 taaccctaattctaaaattctcaaaaactaaacctacaacatgttaaatacaattatcagaatcatagactcaagattattgaatgttagtcccaccctt 20404115  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  20404116 accttggaatataaaaatcgcagc 20404139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 23407255 - 23407325
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| || |||||||||||||||||||    
T  23407255 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataagatgaaaatcgcagcctcta 23407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 20532600 - 20532536
Alignment:
Q  149 tgttaaatttaatcatcagaatta-cagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| ||| |||||||  ||||||||||||||||||||||||||||    
T  20532600 tgttaaatctaatcatcagaattatcag-cttaatagaattgaatgttagtctcacccttacctta 20532536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 22526394 - 22526478
Alignment:
Q  147 cttgttaaatttaatcatcagaattaca-gacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||| ||||||||| ||||| | | ||||| || |||||||||||||||||||||||||||| || || |||||||||||    
T  22526394 cttgttaaatctaatcatcaaaattataaggcttaagaaaattgaatgttagtctcacccttaccttataa-atcaaaatcgcagc 22526478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 17460272 - 17460208
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  17460272 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17460208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 17085136 - 17085077
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccct 206  Q
    |||||||||| ||||||||| ||||| || ||||| ||||||||||||||||| ||||||    
T  17085136 cttgttaaatctaatcatcataattaaaggcttaagaagattgaatgttagtcccaccct 17085077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 17085370 - 17085311
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccct 206  Q
    |||||||||| ||||||||| ||||| || ||||| ||||||||||||||||| ||||||    
T  17085370 cttgttaaatctaatcatcataattaaaggcttaagaagattgaatgttagtcccaccct 17085311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 22385141 - 22385074
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||| |||||||||||    
T  22385141 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccattaccttagaa 22385074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 24049347 - 24049454
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | |||||||| ||||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  24049347 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatataattttcagaatcatagactcaagattattgaatgttagtcccaccctt 24049446  T
Q  208 accttaga 215  Q
    ||||||||    
T  24049447 accttaga 24049454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 22184026 - 22184092
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| |  ||||| || | ||||||||| ||||||||||||||||    
T  22184026 cttgttaaatctaatcatcagaattataagcttaagaaaactgaatgttattctcacccttacctta 22184092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 23649423 - 23649488
Alignment:
Q  167 gaattacagacttaataagattgaat-gttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||| |||| |  |||||||||||||||||||||||||||| |||||||||||    
T  23649423 gaatcacagacttaataaaattgcagagttagtctcacccttaccttagaatatg-aaatcgcagcc 23649488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 5609878 - 5609838
Alignment:
Q  178 ttaataagattgaatgttagtctcacccttaccttagaata 218  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  5609878 ttaataaaattgaatgctagtctcacccttaccttagaata 5609838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 7464980 - 7464904
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| || |||| |||||  |||||||||||||| | |  ||||||| ||||||||||||||||||||||||||||    
T  7464980 aatcctacacttgctaaatacaatcatcagaattatataggttaataaaattgaatgttagtctcacccttacctta 7464904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 17342813 - 17342737
Alignment:
Q  162 catcagaattaca-gacttaataagattgaat-gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||| |  ||||||| | ||||| ||||||||||||||||||||||   |||||||||||||||||||    
T  17342813 catcagaattacaagggttaataaaactgaatcgttagtctcacccttaccttagttgatgaaaatcgcagcctcta 17342737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 22418651 - 22418588
Alignment:
Q  149 tgttaaatttaatcatcagaatta-cagacttaataagattgaatgttagtctcacccttacctt 212  Q
    |||||||| ||||||||||||||| ||| ||||| |  |||||||||||||||||||||||||||    
T  22418651 tgttaaatctaatcatcagaattatcag-cttaagagaattgaatgttagtctcacccttacctt 22418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 12037348 - 12037285
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttaca 75  Q
    |||||||||||||| | ||||||| ||||||   ||||||||| ||||||||||||||| ||||    
T  12037348 gattattctacaacctaaacaccaattattaacctaattcatcggattatctactctttctaca 12037285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 15202411 - 15202304
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | | ||||||  |||  ||||||| | ||||| || |  ||||||||||||||||||||||    
T  15202411 taaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccctt 15202312  T
Q  208 accttaga 215  Q
    ||||||||    
T  15202311 accttaga 15202304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 16800344 - 16800411
Alignment:
Q  147 cttgttaaatttaatcatcagaattaca-gacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||| ||||||| | | ||||| || |||||||| |||||||||||||||||||    
T  16800344 cttgttaaatctaatcattagaattataaggcttaagaaaattgaatgatagtctcacccttacctta 16800411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 21697507 - 21697416
Alignment:
Q  123 aaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttacctta 213  Q
    |||| ||| ||||| ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||    
T  21697507 aaattctctaaaaccaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 21697416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 37609827 - 37609720
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  | ||||| | ||||| || |  ||||||||||||||||||||||    
T  37609827 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcaccctt 37609728  T
Q  208 accttaga 215  Q
    ||||||||    
T  37609727 accttaga 37609720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 45130273 - 45130214
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| || ||||||||||||||||||||| |||  |||||| ||||||    
T  45130273 agacttaataagattgcaaagttagtctcacccttaccttataatcagaaaattgcagcc 45130214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 17141792 - 17141842
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaa 223  Q
    ||||||||||| |||| || ||||||||||||||||||||||||| |||||    
T  17141792 agacttaataaaattgcaaagttagtctcacccttaccttagaatgtgaaa 17141842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 18620350 - 18620388
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  18620350 gttagtctcacccttaccttaaaatgtgaaaatcgcagc 18620388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 20499481 - 20499574
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||| || |||| |||||  |||||||||||||| | |  ||||||  |||||||| ||||||||||||||||||||||| |||||||| ||||    
T  20499481 aatcctacacttgctaaatacaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttagaat-tgaaaatcacagc 20499574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 21918233 - 21918195
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  21918233 gttagtctcacccttaccttagaatgtgaaaatcacagc 21918195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 26354920 - 26354886
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcg 227  Q
    ||||||||||||||||||||||||| |||||||||    
T  26354920 gttagtctcacccttaccttagaatgtgaaaatcg 26354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 28648295 - 28648257
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  28648295 gttagtctcacccttaccttataagatgaaaatcgcagc 28648257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 22002676 - 22002720
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  22002676 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 22002720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 38854480 - 38854436
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||    
T  38854480 attgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 38854436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 17438816 - 17438788
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  17438816 tacatcaatctaacaatttttcatcaatt 17438788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 19154164 - 19154136
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  19154164 tacatcaatctaacaatttttcatcaatt 19154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 22365455 - 22365483
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  22365455 tacatcaatctaacaatttttcatcaatt 22365483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 22483650 - 22483706
Alignment:
Q  14 ttattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||| |||||| || || |||  |||||||||||||||| |||||||||    
T  22483650 ttattctacaacctgaacatcaattcttatgttaattcatcagattacctactcttt 22483706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 23661283 - 23661351
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    |||||||| |||| |||||||| | || ||||  |||||||||||  |||| |||||||||||||||||    
T  23661283 tgttaaatctaattatcagaatcataggcttatgaagattgaatgccagtcccacccttaccttagaat 23661351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 24353865 - 24353893
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  24353865 tacatcaatctaacaatttttcatcaatt 24353893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 16447955 - 16447732
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  16447955 gattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 16447856  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16447855 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 16447756  T
Q  212 tagaatatgaaaatcgcagcctcta 236  Q
    || ||  | ||||||||||||||||    
T  16447755 tataa-ctcaaaatcgcagcctcta 16447732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 19102663 - 19102444
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||    
T  19102663 gattattctacaacatgaacaccacctattactttaattcatcagattatccactctttctacatctatctaacaatttttcatcaattcctcactttaa 19102564  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19102563 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattactgacttaataagattgaatgttagtctcacccttacct 19102464  T
Q  212 tagaatatgaaaatcgcagcc 232  Q
    || || ||| |||||||||||    
T  19102463 tataagatg-aaatcgcagcc 19102444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 21120007 - 21119807
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  21120007 gattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 21119908  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21119907 ccctaattctcaaatcttccaaaattaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 21119808  T
Q  212 t 212  Q
    |    
T  21119807 t 21119807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 62 - 232
Target Start/End: Complemental strand, 3851147 - 3850978
Alignment:
Q  62 ctactctttttacatcaatctaacaatttttcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaat 161  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3851147 ctactctttcaacatcaatctaacaatttttcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaat 3851048  T
Q  162 catcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  3851047 catcagaattacggacttaataagattgaatgttagtctcacccttaccttataagatg-aaatcgcagcc 3850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 19024231 - 19024347
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| |||||||||||||||||| ||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||  ||||||||  |    
T  19024231 aatttctcactttaaccctaattctcaaattctctaaaaccaatcctacacttgttaaacttaatcatcagaattacagacttaatagaattgaatgcaa 19024330  T
Q  197 gtctcacccttacctta 213  Q
    |||||||||||||||||    
T  19024331 gtctcacccttacctta 19024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 23527405 - 23527300
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||||||| ||||||||||| |   | |||||||| |||||||||||||||||| ||||| || |||||||| ||||| |||||||    
T  23527405 taaccctaattctcaaatcctcaaaaactaatcctataacatgttaaatctaatcatcagaattacaggcttaagaaaattgaatgctagtcccaccctt 23527306  T
Q  208 acctta 213  Q
    ||||||    
T  23527305 acctta 23527300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 23531945 - 23531869
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  23531945 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaataagaaaatcgcagcctctatgtg 23531869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 14978607 - 14978543
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| |||| ||||| ||||||||||||||||| |||||||||||||    
T  14978607 tgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 14978543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 25618964 - 25618900
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| |||| ||||| ||||||||||||||||| |||||||||||||    
T  25618964 tgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 25618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 27557665 - 27557737
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||| | || ||||| |||||||||||||||||||||||||| |||| |  |||||||||||||||||||    
T  27557665 tcagaatcataggcttaagaagattgaatgttagtctcacccttagcttaaagaatgaaaatcgcagcctcta 27557737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 25921869 - 25921932
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttaca 75  Q
    |||||||||||||| ||||||||| | ||||| ||||||||||||||||| |||||||| ||||    
T  25921869 gattattctacaacctgaacaccaatcattaccttaattcatcagattatttactctttctaca 25921932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 22792496 - 22792430
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| |||||||||||| || |  ||||| || ||||||||||||||||||||||||||||    
T  22792496 cttgttaaatctaatcatcagaaatataagcttaagaaaattgaatgttagtctcacccttacctta 22792430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 19669335 - 19669391
Alignment:
Q  176 acttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    |||||||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  19669335 acttaataggattgaatgttagtctcacccttaccttataa-atcaaaatcgcagcct 19669391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 17229168 - 17229061
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| |||||| ||| |||||||| || ||  | |||||||| |||| || ||||| | || ||||| ||||||||||||||||| |||||||    
T  17229168 taaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttagtcccaccctt 17229070  T
Q  208 accttagaa 216  Q
    |||||||||    
T  17229069 accttagaa 17229061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 18454115 - 18454182
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||||| |||| |||||||| | |  ||||| ||||||||||||||||| ||||||||||||||||    
T  18454115 tgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtcccacccttaccttagaa 18454182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 31629966 - 31629859
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  ||||||||||||||||||||||    
T  31629966 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccctt 31629867  T
Q  208 accttaga 215  Q
    ||||||||    
T  31629866 accttaga 31629859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 18409049 - 18409011
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18409049 gttagtctcacccttaccttagaatgtgaaaatcgcagc 18409011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 18697361 - 18697482
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| | | |||||||||| ||| ||| |||||||| ||  |  | |||||||| |||| |||||||| | || ||||| ||||||||    
T  18697361 tcatcaattcctcacttttaacctaattctccaattctc-aaaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattga 18697459  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| ||||| |||||||||||||    
T  18697460 atgctagtcccacccttacctta 18697482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 1599056 - 1599101
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||    
T  1599056 attgaatgttagtcccacccttaccttggaatataaaaatcgcagc 1599101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 19363304 - 19363415
Alignment:
Q  100 tcctcactct-aaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttag 197  Q
    |||||||||| |||||||||| || ||| ||||||||||||||| ||  | |||||||| ||||||   |||| | || ||||| || ||||||||||||    
T  19363304 tcctcactcttaaccctaatt-tccaattctccaaaactaatcctacaacatgttaaatctaatca---gaatcataggcttaagaaaattgaatgttag 19363399  T
Q  198 tctcacccttacctta 213  Q
    ||||||||||||||||    
T  19363400 tctcacccttacctta 19363415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 19653066 - 19653127
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcg 227  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||    
T  19653066 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttagaatgtgaaaatcg 19653127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 20137562 - 20137627
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| ||||||| ||||||    
T  20137562 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctttccttag 20137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 22195307 - 22195242
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| ||||||| ||||||    
T  22195307 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctttccttag 22195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 23992966 - 23993071
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||||| ||||| || |  |||||||||||||| |||||||    
T  23992966 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttagtcccaccctt 23993065  T
Q  208 acctta 213  Q
    ||||||    
T  23993066 acctta 23993071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 33443950 - 33444014
Alignment:
Q  149 tgttaaatttaatcatcagaatta-cagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  33443950 tgttaaatctaatcatcagaattatcag-cttaagagaattgaatgttagtctcacccttacctta 33444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 18955017 - 18954953
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaat-atgaaaatcgcagcctcta 236  Q
    |||||||||||||||| || ||||||||||||||||||||| | | | |||||||||||||||||    
T  18955017 agacttaataagattgcaaagttagtctcacccttaccttaaagtgaagaaaatcgcagcctcta 18954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 4189828 - 4189871
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||||||||||||||  | |||||||||||||||||||    
T  4189828 gttagtctcacccttaccttaatagatgaaaatcgcagcctcta 4189871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 8226789 - 8226723
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||  | ||||||||||||||    
T  8226789 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta-tagatgaaaatcgcagc 8226723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 16919886 - 16919823
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||||||||| || ||| |||||| |||||||||| |||  |||||||||||||||||    
T  16919886 agacttaataagattgcaaagttggtctcatccttaccttataatcagaaaatcgcagcctcta 16919823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 17201129 - 17201078
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttaga 215  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||||    
T  17201129 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 17201078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 23415917 - 23415975
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| ||||||||||||||||| ||||||||||||| |  ||||||||||| |||||||    
T  23415917 cttaagaagattgaatgttagtcccacccttacctta-agaatgaaaatcgcggcctcta 23415975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 25628604 - 25628533
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctctat 237  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |||  ||||||| ||||||||||    
T  25628604 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataatcagaaaatctcagcctctat 25628533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 18198704 - 18198584
Alignment:
Q  92 tcatcaattcctcac-tctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    ||||||||||||||| | ||||| |||||| ||| | ||||||| ||||||| || |||||||||| ||| ||||| ||||| | |||||| || ||  |    
T  18198704 tcatcaattcctcacttttaaccttaattc-caatttctccaaacctaatcctacacttgttaaatctaagcatcataattatacacttaagaa-atata 18198607  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| |||||||||| ||||||||    
T  18198606 atgctagtctcaccattacctta 18198584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 18707112 - 18707233
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| | | |||||||||| ||| ||| |||||||| ||  |  | |||||||| |||| |||||||| |  | ||||| ||||||||    
T  18707112 tcatcaattcctcacttttaacctaattctccaattctc-aaaactaaacctccaacatgttaaatctaattatcagaatcatgggcttaagaagattga 18707210  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| ||||| |||||||||||||    
T  18707211 atgctagtcccacccttacctta 18707233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 20556098 - 20556017
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| ||||||||||||| | ||   ||| || |||||||||||||| ||||||||||||| |  ||||||||||||||    
T  20556098 tgttaaatctaatcatcagaatcataggtgtaagaaaattgaatgttagtcccacccttacctta-acaatgaaaatcgcagc 20556017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 23077558 - 23077675
Alignment:
Q  96 caattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgt 194  Q
    ||||| |||||| ||||| ||||| |||||| ||| ||||||||||| ||  | ||||||||  || ||| ||||| ||||||||||||  ||||||||     
T  23077558 caatttctcactttaacc-taattatcaaattctcaaaaactaatcctacaacatgttaaatacaaccattagaatcacagacttaatagaattgaatgc 23077656  T
Q  195 tagtctcacccttacctta 213  Q
    ||||| ||| |||||||||    
T  23077657 tagtcccactcttacctta 23077675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 25959511 - 25959461
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaa 216  Q
    |||||||||||||||||  |||| || ||||||||||||||||||||||||    
T  25959511 gaattacagacttaatagaattgcaaagttagtctcacccttaccttagaa 25959461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 29045132 - 29045190
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| |||||| || ||||||| ||| |||||| ||||| |||||||||    
T  29045132 gattattctacaacctgaacatcaattattaccttagttcatcggattacctactcttt 29045190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 19005963 - 19006007
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||    
T  19005963 attgaatgttagtctcacccttacctta-acaatgaaaatcgcagc 19006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 18895522 - 18895486
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| || ||||||||||||||||||||||||||||    
T  18895522 cttaagaaaattgaatgttagtctcacccttacctta 18895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 23077523 - 23077551
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  23077523 tacatcaatctaacaatttttcatcaatt 23077551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 27332537 - 27332505
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaata 218  Q
    |||||||| ||||||||||||||||||||||||    
T  27332537 attgaatgctagtctcacccttaccttagaata 27332505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 27393277 - 27393245
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaata 218  Q
    |||||||| ||||||||||||||||||||||||    
T  27393277 attgaatgctagtctcacccttaccttagaata 27393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 35011969 - 35011997
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  35011969 tacatcaatctaacaatttttcatcaatt 35011997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 18318385 - 18318162
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  18318385 gattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 18318286  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18318285 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 18318186  T
Q  212 tagaatatgaaaatcgcagcctcta 236  Q
    || ||  | ||||||||||||||||    
T  18318185 tataa-ctcaaaatcgcagcctcta 18318162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 20765430 - 20765230
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||    
T  20765430 gattattctacatcatgaacaccacttattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatca-ttcctcactttaa 20765332  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20765331 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaattttagtctcacccttacct 20765232  T
Q  212 ta 213  Q
    ||    
T  20765231 ta 20765230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 36315392 - 36315500
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  36315392 taaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccctta 36315491  T
Q  209 ccttagaat 217  Q
    |||||||||    
T  36315492 ccttagaat 36315500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 22177467 - 22177347
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| ||| |||||||  ||| | ||| |||  |||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22177467 tcatcaatttctcactttaaacctaatttccaacttctctaaat-taatcctacacttgttaaatttaatcatcagaattacagacttaataagattgaa 22177369  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||||||||||||    
T  22177368 tgctagtctcacccttacctta 22177347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 27988181 - 27988102
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  27988181 taatcctacacttgttaaatttaaccatcagaattacagacttaatagaattgaatgttagtctcacccttaccttagaa 27988102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 26739863 - 26739779
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||  | || |||||||||||    
T  26739863 cttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaaatcaaaatcgcagc 26739779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 31062231 - 31062320
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  31062231 tgttaaatctaattatcagaatcataggcttaagaagattgaatgtta--ctcacccttaccttagaataagaaaatcgcagcctctatgtg 31062320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 26732050 - 26731989
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  26732050 cttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcaccctta 26731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 21327485 - 21327423
Alignment:
Q  151 ttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||| ||||||||||||||| |||||||| || |||||||||||||||||| |||||||||    
T  21327485 ttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcactcttacctta 21327423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 8286097 - 8286059
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8286097 gttagtctcacccttaccttagaatatgaaaatcgcagc 8286059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 13096318 - 13096384
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||||||| ||||||||||||||    
T  13096318 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagcc 13096384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 20572730 - 20572812
Alignment:
Q  131 caaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||| || || | |||||||| ||||||||||||| | || ||||  || ||||||||||||||||||||||||||||    
T  20572730 caaaactaaacctacacatgttaaatctaatcatcagaatcataggcttaccaaaattgaatgttagtctcacccttacctta 20572812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 22413073 - 22413154
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| ||||||||||||| |  ||||||||||||||    
T  22413073 tgttaaatctaattatcagaatcataggcttaaaaagattgaatgttagtcccacccttacctta-acaatgaaaatcgcagc 22413154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 36508927 - 36508869
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| | ||||||| ||||||| |||||||||||||||| |||||||||    
T  36508927 gattattctacaacctaaacaccaattattaccttaattcatcagattacctactcttt 36508869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 1097339 - 1097404
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  1097339 gaatcacagacttaatataattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 1097404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 23470680 - 23470745
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||||||||| | || ||||| |||||||||||||| || ||||||||||||||    
T  23470680 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttattcccacccttaccttag 23470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 23476392 - 23476457
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||| ||||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  23476392 tgttaaatctaatcattagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 23476457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 41094919 - 41094814
Alignment:
Q  113 cctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||| ||| ||| |||||||| || ||  | ||||||||  ||| ||||||||||||| ||||| |  ||||| ||||||||||||||||||||    
T  41094919 cctaattctccaattctcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttagtctcacccttacct 41094820  T
Q  212 tagaat 217  Q
    ||||||    
T  41094819 tagaat 41094814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 40723524 - 40723460
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||||||| |||| ||| | || ||||| ||||||||||||||||| |||||||||||||    
T  40723524 tgttaaatttaattatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 40723460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 13026161 - 13026200
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  13026161 gttagtctcacccttaccttagaatgtgaaaatcgcagcc 13026200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 20917272 - 20917149
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | | ||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  20917272 taaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 20917173  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  20917172 accttggaatataaaaatcgcagc 20917149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 32028840 - 32028885
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||    
T  32028840 attgaatgttagtctcatccttaccttggaatataaaaatcgcagc 32028885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 25573641 - 25573581
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttac 209  Q
    |||||||| ||||||||||||| | ||  |||| ||||||||||||||||| |||||||||    
T  25573641 tgttaaatctaatcatcagaatcataggattaagaagattgaatgttagtcccacccttac 25573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 18357200 - 18357243
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  18357200 gttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 18357243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 22075856 - 22075899
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||    
T  22075856 gttagtctcacccttaccttggaatattaaaatcgcagcttcta 22075899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 25576069 - 25576010
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||| || |||||||||| | || ||||| ||||||||||||||||| ||||||||    
T  25576069 tgttaaatctattcatcagaatcataggcttaagaagattgaatgttagtcccaccctta 25576010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 41860643 - 41860580
Alignment:
Q  151 ttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||| |||| |||| ||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  41860643 ttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtcccacccttaccttag 41860580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 20907831 - 20907793
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  20907831 gttagtctcacccataccttagaatgtgaaaatcgcagc 20907793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 21740821 - 21740741
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaat--tacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    ||||| || |||||||||||||| |||||||||  ||| || ||| ||| ||||| || |||||||||||||||||||||||    
T  21740821 aatcctacacttgttaaatttaaccatcagaatcatactga-ttagtaaaattgattgctagtctcacccttaccttagaat 21740741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 21870916 - 21870783
Alignment:
Q  99 ttcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaa-tcatcagaattacagacttaataagattgaatgttag 197  Q
    |||||| || |||||||||||||||||| ||| ||||  ||||| || |||||||| |  || | ||  |||||||||| ||| ||  |||||||| |||    
T  21870916 ttcctctctttaaccctaattctcaaattctctaaaatcaatcctacacttgttaattacaactgatt-gaattacagaattagtagaattgaatgctag 21870818  T
Q  198 tctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||  |  |||||||||||||||    
T  21870817 tctcacccttaccttgtatgatgaaaatcgcagcc 21870783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 21875196 - 21875063
Alignment:
Q  99 ttcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaa-tcatcagaattacagacttaataagattgaatgttag 197  Q
    |||||| || |||||||||||||||||| ||| ||||  ||||| || |||||||| |  || | ||  |||||||||| ||| ||  |||||||| |||    
T  21875196 ttcctctctttaaccctaattctcaaattctctaaaatcaatcctacacttgttaattacaactgatt-gaattacagaattagtagaattgaatgctag 21875098  T
Q  198 tctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||  |  |||||||||||||||    
T  21875097 tctcacccttaccttgtatgatgaaaatcgcagcc 21875063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 21985418 - 21985352
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  21985418 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 21985352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 25422404 - 25422470
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  25422404 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 25422470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 25432266 - 25432332
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  25432266 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 25432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 264009 - 263965
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  264009 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 263965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 10732178 - 10732134
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  10732178 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 10732134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 20026099 - 20026055
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||    
T  20026099 attgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 20026055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 22144941 - 22144985
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||    
T  22144941 attgaatgctagtctcacccttaccttagaata-aaaaatcgcagc 22144985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 24068232 - 24068325
Alignment:
Q  121 tcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||| ||| ||||  ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||    
T  24068232 tcaaattctctaaaatcaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 24068325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 26011263 - 26011219
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||    
T  26011263 attgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 26011219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 40726683 - 40726732
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  40726683 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 40726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 22106626 - 22106586
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttacctta 213  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  22106626 agacttaataagattgcaaagttagtctcacccttacctta 22106586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 43138137 - 43138355
Alignment:
Q  22 caacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaaccctaattct 121  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  43138137 caacatgaacaccacctattactttaattcatctgattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaaccctaattat 43138236  T
Q  122 caaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatga 221  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  43138237 caaatccttcaaaactaatcccacccttgttaaatttaatcatcagaattacagacctaataagattgaatgttagtctcacccttaccttagaataaga 43138336  T
Q  222 aaatcgcagcctctatgtg 240  Q
    |||||||||||||||||||    
T  43138337 aaatcgcagcctctatgtg 43138355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 24941456 - 24941670
Alignment:
Q  17 ttctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaacccta 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||| |    
T  24941456 ttctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctacgaatttttcatcaattcctcactttaacccaa 24941555  T
Q  117 attctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  24941556 attctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtttgtctcacccttaccttataa 24941655  T
Q  217 tatgaaaatcgcagcc 232  Q
     ||| |||||||||||    
T  24941656 gatg-aaatcgcagcc 24941670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 23005602 - 23005744
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| ||| || ||||| |||||||||||| ||| ||||||||||| || ||| |||||||||||||||| ||||||||||||||||  ||||||    
T  23005602 tcatcaatttctccctttaacc-taattctcaaattctctaaaactaatcctacacttcttaaatttaatcatcaaaattacagacttaatagaattgaa 23005700  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    || |||||||||||||||||||||| ||  ||||||||||||||    
T  23005701 tgctagtctcacccttaccttagaaaatcgaaatcgcagcctct 23005744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 19672754 - 19672837
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcag 230  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||    
T  19672754 cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatgtgaaaatcgcag 19672837  T

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Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 25109720 - 25109840
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| | ||| |||||||| ||| ||| ||||||||| | || |||||||||||||||||||||||||||||||||||||  ||||||    
T  25109720 tcatcaatttctcacttttacc-taattctccaattctctaaaactaattctacacttgttaaatttaatcatcagaattacagacttaatagaattgaa 25109818  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||||||||||||    
T  25109819 tgctagtctcacccttacctta 25109840  T

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Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 23792126 - 23792246
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||||||  ||| | ||| |||  |||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  23792126 tcatcaatttctcactttaaccctaatttccaacttctctaaat-taatcatacacttgttaaatttaatcatcagaattacagacttaataagattgaa 23792224  T
Q  192 tgttagtctcacccttacctta 213  Q
    || ||| |||||||||||||||    
T  23792225 tgctaggctcacccttacctta 23792246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 22458765 - 22458689
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  22458765 taatcccacacttgttaaatt-aatcatcagaattacagacttaataaaattgaatgctagtctcacccttaccttag 22458689  T

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Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 26393308 - 26393374
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  26393308 cttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcacccttacctta 26393374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 27845505 - 27845609
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| || ||| ||| ||||||||||| ||  |||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  27845505 taaccctaatt-tccaattctcaaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcaccctt 27845603  T
Q  208 acctta 213  Q
    ||||||    
T  27845604 acctta 27845609  T

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Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 298085 - 298017
Alignment:
Q  172 acagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||||  |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  298085 acagacttaatagaattgcaagttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 34401763 - 34401709
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  34401763 attgaatgttagtcccacccttaccttagaataagaaaatcgcagcctctatgtg 34401709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 31346135 - 31346194
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  31346135 cttaagaagattgaatgttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 31346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 18546209 - 18546143
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||| ||||| ||||||||||||||| |||||||| || |||||| |||||||||||||||||||||    
T  18546209 cttgctaaatctaatcatcagaattatagacttaagaaaattgaacgttagtctcacccttacctta 18546143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24899919 - 24899865
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  24899919 attgaatgttagtcccacccttacctcagaataagaaaatcgcagcctctatgtg 24899865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24902396 - 24902342
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  24902396 attgaatgttagtcccacccttacctcagaataagaaaatcgcagcctctatgtg 24902342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24904873 - 24904819
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  24904873 attgaatgttagtcccacccttacctcagaataagaaaatcgcagcctctatgtg 24904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24907348 - 24907294
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  24907348 attgaatgttagtcccacccttacctcagaataagaaaatcgcagcctctatgtg 24907294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 7187412 - 7187476
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  7187412 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 7187476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 6726784 - 6726907
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  6726784 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 6726883  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  6726884 accttggaatataaaaatcgcagc 6726907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 23653632 - 23653589
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  23653632 gttagtctcacccttaccttagaatgtgaaaatcgcagcctcta 23653589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 22173043 - 22172962
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||| |||| ||| | || ||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  22173043 tgttaaatctaattatcataatcataggcttaagaagattgaatgttagtctcacccttacctta-acaatgaaaatcgcagc 22172962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 23208159 - 23208272
Alignment:
Q  102 ctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctc 201  Q
    |||||| ||||||||||| |||| | ||| |||  |||||| || ||||||| ||  || ||||| ||||||||||| ||||  |||||||| |||||||    
T  23208159 ctcactttaaccctaattttcaacttctctaaat-taatcctacacttgttagatacaaccatcaaaattacagactgaatagaattgaatgctagtctc 23208257  T
Q  202 acccttaccttagaa 216  Q
    |||||||||||||||    
T  23208258 acccttaccttagaa 23208272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24897436 - 24897382
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||    
T  24897436 attgaatgttagtcccacccttacctcagaataagaaaatcacagcctctatgtg 24897382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 39827259 - 39827195
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| |||||||||| |||||| |||||||||||||    
T  39827259 tgttaaatctaatcatcagaatcataggcttaagaagattgaatcttagtcccacccttacctta 39827195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 23067842 - 23067779
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||| |||| || ||||||||||||||||||||| |  |||||||||||||||||||    
T  23067842 agacttaataaaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 23067779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 34137852 - 34137915
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctt 212  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||  ||||||||||||    
T  34137852 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagttccacccttacctt 34137915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 1383836 - 1383778
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| |||| |||| ||||||| |||||||||| ||||| |||||||||    
T  1383836 gattattctacaacctgaagaccaattattacgttaattcatcggattacctactcttt 1383778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 20309973 - 20310031
Alignment:
Q  174 agacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| | ||||||| ||||||||||||| |  |||||||||||||||    
T  20309973 agacttaataagattgcaagttagtcccacccttaccttatatgatgaaaatcgcagcc 20310031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 23286752 - 23286786
Alignment:
Q  197 gtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||||    
T  23286752 gtctcacccttaccttagaatatgaaaatcgcagc 23286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 23801362 - 23801419
Alignment:
Q  13 attattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    ||||||||||||| ||||||||| ||||||| |||||||||| | ||| |||||||||    
T  23801362 attattctacaacctgaacaccagttattaccttaattcatcgggttacctactcttt 23801419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 25616602 - 25616647
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||    
T  25616602 attgaatgttagtcccacccttaccttggaatataaaaatcgcagc 25616647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 41523228 - 41523183
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||    
T  41523228 attgaatgttagcctcacccttaccttggaatataaaaatcgcagc 41523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 43946622 - 43946518
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| || ||| ||||||||||||||| ||  | |||||||| |||| |||||||| | || ||||| || |||||||||| |||| ||||||    
T  43946622 taaccctaatt-tccaattctccaaaactaatcctacaacatgttaaatctaattatcagaatcataggcttaagaaaattgaatgtttgtcttaccctt 43946524  T
Q  208 acctta 213  Q
    ||||||    
T  43946523 acctta 43946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 14179912 - 14179849
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttaca 75  Q
    |||||||| ||||| ||||||||| ||||||   || |||||||||||||||||||||| ||||    
T  14179912 gattattccacaacctgaacaccaattattaacctagttcatcagattatctactctttctaca 14179849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 22337987 - 22338053
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  22337987 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 22338053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 23077310 - 23077376
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  23077310 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 23077376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 26506279 - 26506344
Alignment:
Q  165 cagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||  ||||||| |  ||||||||||||||||||||||||||||  | ||||||||||||||    
T  26506279 cagaattaatgacttaagattattgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 26506344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 27920026 - 27919961
Alignment:
Q  165 cagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||  ||||||| |  ||||||||||||||||||||||||||||  | ||||||||||||||    
T  27920026 cagaattaatgacttaagattattgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 27919961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 20519442 - 20519318
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattga 190  Q
    ||||||||| |||||| |||||||||||  ||| | ||| |||  |||||| || ||||||| ||   | ||||||||||| | | |||||||  |||||    
T  20519442 tcatcaatttctcactttaaccctaatttccaacttctctaaat-taatcctacacttgttagataccaccatcagaattatacaacttaatagaattga 20519344  T
Q  191 atgttagtctcacccttaccttagaa 216  Q
    ||| ||||||||||||||||||||||    
T  20519343 atgctagtctcacccttaccttagaa 20519318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 24368642 - 24368687
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||| |||||||||||| |||||| ||| |||||||    
T  24368642 attgaatgttagtcccacccttaccttggaatataaaattcgcagc 24368687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 24528894 - 24528850
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||    
T  24528894 attgaatgttagtctcacccttacctta-acaatgaaaatcgcagc 24528850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 26508778 - 26508822
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  26508778 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 26508822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 54798087 - 54797886
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  54798087 gattattctacaatatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 54797988  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54797987 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 54797888  T
Q  212 ta 213  Q
    ||    
T  54797887 ta 54797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 14281119 - 14281338
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||    
T  14281119 gattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcataaattcttcactttaa 14281218  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  14281219 ccctaattctcaaatcctccaaaaccaatcccacccttgttaaatttaatcatcagaattacatacttaataagattgaatgttagtctcacccttacca 14281318  T
Q  212 tagaatatgaaaatcgcagcc 232  Q
    || || ||| |||||||||||    
T  14281319 tataagatg-aaatcgcagcc 14281338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 53081423 - 53081281
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||||||  ||| | ||| |||  |||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  53081423 tcatcaatttctcactttaaccctaatttccaacttctctaaat-taatcatacacttgttaaatttaatcatcagaattacagacttaataagattgaa 53081325  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    || |||||||||||||||||||||| ||  ||||||||||||||    
T  53081324 tgctagtctcacccttaccttagaaaatcgaaatcgcagcctct 53081281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 26790190 - 26790307
Alignment:
Q  95 tcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgt 194  Q
    |||||| |||||| | | ||||||| |||||| ||| |||||||| || || | |||||||| ||||||||| ||| | |||||||| || |||||||||    
T  26790190 tcaattgctcacttttaacctaatt-tcaaattctcaaaaactaaacctacacatgttaaatctaatcatcaaaatcatagacttaagaaaattgaatgt 26790288  T
Q  195 tagtctcacccttacctta 213  Q
    |||||||||||||||||||    
T  26790289 tagtctcacccttacctta 26790307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 51463094 - 51463012
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||| |||| ||| | || ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  51463094 tgttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttggaatataaaaatcgcagc 51463012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 14852090 - 14852024
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| || ||||| |||||||||||||||||  ||||||||||||    
T  14852090 cttgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtccaacccttacctta 14852024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19434843 - 19434785
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||    
T  19434843 gattattctacaacctgaacaccaattatttctttaattcatcagattacctactcttt 19434785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 43197867 - 43197822
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  43197867 attgaatgctagtctcacccttaccttagaatatgaaaatcgcagc 43197822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 12611897 - 12611961
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  12611897 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 12611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 23802470 - 23802406
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  23802470 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 23802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 12903644 - 12903682
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12903644 gttagtctcacccttaccttagaatatgaaaatcgcagc 12903682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 14549518 - 14549576
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||  ||||||||    
T  14549518 gattattctacaacctgaacaccaattattaccttaattcatcagattacatactcttt 14549576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 15792642 - 15792746
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| || ||| ||| ||||||||||| ||  | |||||||| ||||||||||||| | || ||||| || |||||||||||||| |||||||    
T  15792642 taaccctaatt-tccaattctcaaaaactaatcctacaacatgttaaatctaatcatcagaatcataggcttaagaaaattgaatgttagtcccaccctt 15792740  T
Q  208 acctta 213  Q
    ||||||    
T  15792741 acctta 15792746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 26049684 - 26049619
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||||| ||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  26049684 tgttaaatctaatcatcataatcataggcttaagaagattgaatgttagtcccacccttaccttag 26049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 32306216 - 32306152
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||| ||| | || ||||| ||||||||||||||||| |||||||||||||    
T  32306216 tgttaaatctaatcatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 32306152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 14970132 - 14970010
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || |   | ||||||||  |||  ||||||| ||||||| || |  ||||||||||||||||||||||    
T  14970132 taaccctaattctcaaattctcaaaaactaaacctataacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtctcaccctt 14970033  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    |||||| |  ||||||||||||||    
T  14970032 acctta-acaatgaaaatcgcagc 14970010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 52313547 - 52313614
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| | |||||||| |  |||||||||||||| |||||||||||| |||||| |||||||||||    
T  52313547 tcagaatcatagacttaagattattgaatgttagtcccacccttaccttggaatataaaaatcgcagc 52313614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 8847253 - 8847291
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8847253 gttagtctcacccttaccttagaatgtgaaaatcgcagc 8847291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 12841495 - 12841616
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| | | |||||||||| ||| ||| |||||||| ||  |  | |||||||| |||| |||||||| |  | ||||| ||||||||    
T  12841495 tcatcaattcctcacttttaacctaattctccaattctc-aaaactaaacctccaacatgttaaatctaattatcagaatcatgggcttaagaagattga 12841593  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||||||||| |||||||||||||    
T  12841594 atgttagtcccacccttacctta 12841616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 13812173 - 13812108
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||||||    
T  13812173 acagacttaatagaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 13812108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 15091719 - 15091784
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||  |||| || ||||||| ||||||||||||||||| |||||||||||||    
T  15091719 gaatcacagacttaatagaattgcaaagttagtcccacccttaccttagaatgtgaaaatcgcagc 15091784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 15372067 - 15372112
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  15372067 attgaatgctggtctcacccttaccttagaataagaaaatcgcagc 15372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 15374359 - 15374404
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  15374359 attgaatgctggtctcacccttaccttagaataagaaaatcgcagc 15374404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 32852254 - 32852371
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| |||| ||||||||||||| ||| ||||| ||||  || |||||||| |  || |    |||||||||| ||||||  |||||||| ||    
T  32852254 aatttctcactttaactctaattctcaaattctctaaaaccaatcatacacttgttaattacaaccgattgaattacagaattaatagaattgaatgcta 32852353  T
Q  197 gtctcacccttaccttag 214  Q
    ||||||||||||||||||    
T  32852354 gtctcacccttaccttag 32852371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 15867986 - 15867870
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    ||||||||||| |||||||||||||||||| ||| ||||  ||||| || |||||||| |  || |    |||||| ||| ||| ||  |||||||| ||    
T  15867986 aattcctcactttaaccctaattctcaaattctctaaaatcaatccaacacttgttaattacaaccgattgaattatagaattattagaattgaatgcta 15867887  T
Q  197 gtctcacccttacctta 213  Q
    |||||||||||||||||    
T  15867886 gtctcacccttacctta 15867870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 16043905 - 16044013
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatccca-cccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||||||| ||||||||||| |   | ||||||||  |||  ||||||  | |||||||| |  | || |||||||||||||||||    
T  16043905 taaccctaattctcaaatcctcaaaaactaatcctataacatgttaaatacaattttcagaaccatagacttaagattactgcatgttagtctcaccctt 16044004  T
Q  208 accttagaa 216  Q
    |||||||||    
T  16044005 accttagaa 16044013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 35660756 - 35660812
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactct 68  Q
    |||||||||||||| ||||||||| ||||||| ||| |||||| ||||| |||||||    
T  35660756 gattattctacaacctgaacaccaattattaccttacttcatcggattacctactct 35660812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 11873 - 11750
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | | ||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  11873 taaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 11774  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    | ||| |||||| |||||||||||    
T  11773 atcttggaatataaaaatcgcagc 11750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 3515744 - 3515851
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||||||||||  || |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  ||||||||||||||||||||||    
T  3515744 taaccctaattctcaaattatcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccctt 3515843  T
Q  208 accttaga 215  Q
    ||||||||    
T  3515844 accttaga 3515851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 15368558 - 15368601
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgca 229  Q
    |||||||| | |||||||||||||||||||||| ||||||||||    
T  15368558 attgaatgctggtctcacccttaccttagaataagaaaatcgca 15368601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 17053855 - 17053914
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| || ||||||||||||||||||||  |  |||||||||||||||    
T  17053855 agacttaataagattgcaaagttagtctcacccttaccttgtatgatgaaaatcgcagcc 17053914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 22633461 - 22633418
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  22633461 gttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 22633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 24029640 - 24029683
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  24029640 gttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 24029683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 43255394 - 43255351
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  43255394 gttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 43255351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 52242485 - 52242401
Alignment:
Q  147 cttgttaaatttaatcatcagaat--tacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| | ||| |||||||||  |||||| ||||||  |||||||| |||||||||||||||||||| | ||||||||||||||    
T  52242485 cttgttaattataaccatcagaatcatacaga-ttaatagaattgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 52242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 11099 - 11006
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||| || |||| |||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||| | ||||||||||||||    
T  11099 aatcctacacttgctaaatacaatcatcagaattatatagattaatacaattgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 11006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 3332695 - 3332761
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttaga-atatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || ||||||||||||||||||||| | | |||||||||||||||||||    
T  3332695 acagacttaatagaattgcaaagttagtctcacccttaccttaaagaaatgaaaatcgcagcctcta 3332761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 3838092 - 3838174
Alignment:
Q  132 aaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||    
T  3838092 aaaaccaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 3838174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 14826012 - 14826062
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| | |||||||| || ||||| ||||||||||||||||||||||    
T  14826012 atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 14826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 23373755 - 23373717
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  23373755 gttagtctcacccttatcttagaatataaaaatcgcagc 23373717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 7640427 - 7640383
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  7640427 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 7640383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 9638877 - 9638934
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctt 69  Q
    ||||| ||| |||| || |||||| |||||||  ||||||||||||||||||||||||    
T  9638877 gattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 9638934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 15489574 - 15489469
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccac-ccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||||| ||||| || |  ||||||||||| || |||||||    
T  15489574 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttattcccaccctt 15489475  T
Q  208 acctta 213  Q
    ||||||    
T  15489474 acctta 15489469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 17334185 - 17334249
Alignment:
Q  149 tgttaaatttaatcatcagaatta-cagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| ||| ||||| |  |||||||| |||||||||||||||||||    
T  17334185 tgttaaatctaatcatcagaattatcag-cttaagagaattgaatgctagtctcacccttacctta 17334249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 20150828 - 20150921
Alignment:
Q  121 tcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||| ||| ||||  ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||    
T  20150828 tcaaattctctaaaaacaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 20150921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 22354671 - 22354720
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  22354671 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 44616212 - 44616256
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  44616212 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 44616256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 50221579 - 50221535
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  50221579 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 50221535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 155000 - 155086
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||| |||||||  |||| ||||||||||||  |||| || ||||||||||||||||||||| ||  | ||||||||||||||||    
T  155000 tgttaaatctaatcatt-gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataa-ctcaaaatcgcagcctcta 155086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 14052605 - 14052565
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttacctta 213  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  14052605 agacttaataagattgcaaagttagtctcacccttacctta 14052565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 15123150 - 15123110
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  15123150 gttagtctcacccttaccttagttgatgaaaatcgcagcct 15123110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 15868022 - 15867994
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  15868022 tacatcaatctaacaatttttcatcaatt 15867994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 16224407 - 16224451
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcag 230  Q
    |||||||| | ||||||| |||||||||||||| |||||||||||    
T  16224407 attgaatgctggtctcactcttaccttagaataagaaaatcgcag 16224451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 178; Significance: 4e-96; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 117299 - 117500
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  117299 gattattctacaacttgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 117398  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  117399 ccctaattctcaaatcctccaaaactaatcccacccttcttaaatttaatcatcataattacagacttaataagattgaatgttagtctcacccttacct 117498  T
Q  212 ta 213  Q
    ||    
T  117499 ta 117500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 128219 - 128076
Alignment:
Q  92 tcatcaattcctcactct-aaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||| ||||||| ||| ||||||||||||| ||| ||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  128219 tcatcaattc-tcactcttaactctaattctcaaattctctaaaactaatcctacacttgttaaatttaatcatcagaattacaaacttaataagattga 128121  T
Q  191 atgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||| || ||||||||||||||||||| ||  |||||||| |||||    
T  128120 atgctaatctcacccttaccttagaaaatcgaaatcgcaacctct 128076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 81191 - 81246
Alignment:
Q  162 catcagaattacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||    
T  81191 catcagaattacagccttaatagaattgaatgctagtctcacccttaccttagaat 81246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 36167400 - 36167601
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  36167400 gattcttctacaacatgaacaccacctattactttaattcatcagattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 36167499  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36167500 ccctaattctcaaatcctccaaaattaatcccacccttgttaaatttaatcatcaggattacagacttaataagattgaatgttagtctcacccttacct 36167599  T
Q  212 ta 213  Q
    ||    
T  36167600 ta 36167601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 21619251 - 21619469
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  21619251 gattcttctacaacatgaacaccacctattactttaattcatctgattatctactctttctacatcaatctaacaatttttcatcaattcctcactttaa 21619350  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21619351 ccctaattctcaaatcctccaaaattaatctcacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 21619450  T
Q  212 tagaatatgaaaatcgcagc 231  Q
    ||  | ||||||||||||||    
T  21619451 ta-tagatgaaaatcgcagc 21619469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 10551173 - 10551373
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttacatcaatctaacaatttttcatcaattcctcactctaa 111  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||    
T  10551173 gattattctacaacatgaacaccacctattactttaatccatcagattatctactctttctacatcaatctaacaatttttaatcaattccgcactttaa 10551272  T
Q  112 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  10551273 ccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcgaaattacagacttaataagattgaatgttaatctcacccttacct 10551372  T
Q  212 t 212  Q
    |    
T  10551373 t 10551373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 43927917 - 43928076
Alignment:
Q  72 tacatcaatctaacaatttttcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaat 170  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | ||||||||| ||  ||||||||||  || |||||||||    
T  43927917 tacatcaatctaacaatttttcatcaattcctcactttaacc-taattctcaaattctcaataactaatcctacaacttgttaaatacaaccatcagaat 43928015  T
Q  171 tacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  43928016 tacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcgcagc 43928076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 23275541 - 23275643
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctat 237  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23275541 aatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcctctat 23275640  T
Q  238 gtg 240  Q
    |||    
T  23275641 gtg 23275643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 17738142 - 17738259
Alignment:
Q  123 aaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaa 222  Q
    |||| ||| ||||| ||||| || ||| |||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| |||    
T  17738142 aaattctctaaaaccaatcctacacttattaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaa 17738241  T
Q  223 aatcgcagcctctatgtg 240  Q
    ||||||||||||||||||    
T  17738242 aatcgcagcctctatgtg 17738259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 19039454 - 19039579
Alignment:
Q  115 taattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||| ||||| ||| |||||  |||| || |||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  19039454 taattcccaaattctctaaaacccatcctacacttgttaaatctaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttag 19039553  T
Q  215 aatatgaaaatcgcagcctctatgtg 240  Q
    |||| |||||||||||||||||||||    
T  19039554 aataagaaaatcgcagcctctatgtg 19039579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 28195478 - 28195578
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  28195478 taaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccctta 28195577  T
Q  209 c 209  Q
    |    
T  28195578 c 28195578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 10557663 - 10557779
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| ||||||  ||||||||||||||||| ||| ||||| ||||| ||  ||||||||||||||||||||||||||||||||||||  |||||||| |     
T  10557663 aatttctcacttgaaccctaattctcaaattctctaaaaccaatcctacagttgttaaatttaatcatcagaattacagacttaatagaattgaatgctg 10557762  T
Q  197 gtctcacccttacctta 213  Q
    |||||||||||||||||    
T  10557763 gtctcacccttacctta 10557779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 21838308 - 21838425
Alignment:
Q  95 tcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgt 194  Q
    ||||||||||||| ||||| |||||||| ||  ||| |||| |||| | || |||||||||||||||||||||||||||||||| ||||  ||||||||     
T  21838308 tcaattcctcactttaacc-taattctccaactctctaaaattaattctacacttgttaaatttaatcatcagaattacagactcaatataattgaatgc 21838406  T
Q  195 tagtctcacccttacctta 213  Q
    |||||||||||||||||||    
T  21838407 tagtctcacccttacctta 21838425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 45219531 - 45219412
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctcca-aaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | |||  ||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  45219531 tcatcaattcctcactttaacc-taattctccaa-cttccttaaattaatcctactcttgttaaatt-aatcatcagaattacagacttaataagattga 45219435  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| |||||||||||||||||||    
T  45219434 atgctagtctcacccttacctta 45219412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 22146817 - 22146741
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  22146817 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaataagaaaatcgcagcctctatgtg 22146741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 231
Target Start/End: Complemental strand, 22109598 - 22109464
Alignment:
Q  95 tcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgt 194  Q
    |||||||||| || |||||||||||||||| | || ||||  |||||| || ||||| ||||  ||  |||||||||||||||||||||  |||| | ||    
T  22109598 tcaattcctctctttaaccctaattctcaatttcttcaaat-taatcctacacttgtcaaatacaactatcagaattacagacttaatataattgtaagt 22109500  T
Q  195 tagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||| || |||||||||||    
T  22109499 tagtctcacccttaccttagaa-atcaaaatcgcagc 22109464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24339967 - 24339913
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  24339967 attgaatgctagtctcacccttaccttagaataagaaaatcgcagcctctatgtg 24339913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 6805111 - 6805053
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  6805111 gattattctacaacctgaacaccaattattaccttaattcatcagattacctactcttt 6805053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 50243799 - 50243880
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||| || ||||| |||| ||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  50243799 tgttaaatctaattatgagaatcacaggcttaagaagattgaatgttagtctcacccttacctta-acaatgaaaatcgcagc 50243880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 14502002 - 14502119
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| |||||||||||||||||| ||| ||||| ||||| || |||||||  |  || |    |||||||||| ||||||  |||||||||||    
T  14502002 aatttctcactttaaccctaattctcaaattctctaaaaccaatcctacacttgttatttacaaccgattgaattacagaattaatagaattgaatgtta 14502101  T
Q  197 gtctcacccttaccttag 214  Q
    ||||||||||||||||||    
T  14502102 gtctcacccttaccttag 14502119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 15471816 - 15471861
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  15471816 attgaatgctagtctcacccttaccttagaatatgaaaatcgcagc 15471861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 9578533 - 9578597
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  9578533 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 9578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 11202209 - 11202273
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||||||    
T  11202209 tgttaaatctaattatcagaatcatagacttaagaagattgaatgctagtctcacccttacctta 11202273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 23412492 - 23412372
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| ||||||||||||| |||| ||||||||| ||||| || ||||| || |  || |    |||||||||| ||||||  |||||||| ||    
T  23412492 aatttctcactttaaccctaattcttaaattctccaaaaccaatcctacacttgtcaattacaaccgattgaattacagaattaatagaattgaatgcta 23412393  T
Q  197 gtctcacccttaccttagaat 217  Q
    |||||||||||||||||||||    
T  23412392 gtctcacccttaccttagaat 23412372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 44495524 - 44495592
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    |||||||| |||| |||| ||| | |||||||| ||||||||||||||||| |||||||||||||||||    
T  44495524 tgttaaatctaattatcataatcatagacttaagaagattgaatgttagtcccacccttaccttagaat 44495592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 13937399 - 13937276
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  13937399 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 13937300  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  13937299 accttggaatataaaaatcgcagc 13937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 16282183 - 16282060
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | | ||||||  |||  ||||||| | ||||| || |  ||||||||||||||||||||||    
T  16282183 taaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccctt 16282084  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  16282083 accttggaatataaaaatcgcagc 16282060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 41124676 - 41124799
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  41124676 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 41124775  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  41124776 accttggaatataaaaatcgcagc 41124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 12386260 - 12386381
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    ||||||||| |||||| ||||| |||||||||||| ||| ||||||||||| ||  | ||||||||  || ||||| ||| | ||||||||||  |||||    
T  12386260 tcatcaatttctcactttaacc-taattctcaaattctcaaaaactaatcctacaacgtgttaaatacaaccatcaaaatcatagacttaatagaattga 12386358  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| ||||| |||||||||||||    
T  12386359 atgctagtcccacccttacctta 12386381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 15207821 - 15207887
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| |   |||| || ||||||||||||||||||||||||||||    
T  15207821 cttgttaaatctaatcatcagaattataagtttaagaaaattgaatgttagtctcacccttacctta 15207887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 32402283 - 32402181
Alignment:
Q  113 cctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacct 211  Q
    ||||||||  |||||||| |||||||| || ||  | |||||||| |||||||||||||||||  ||||| |  |||||||||||||| |||||||||||    
T  32402283 cctaattccaaaatcctcaaaaactaaacctacgacatgttaaatctaatcatcagaattacaagcttaagagaattgaatgttagtcccacccttacct 32402184  T
Q  212 tag 214  Q
    |||    
T  32402183 tag 32402181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 53300879 - 53300825
Alignment:
Q  159 aatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||||||||||||||||||  |||||||| ||||||||| |||||||||    
T  53300879 aatcatcagaattacagacttaatagaattgaatgctagtctcactcttacctta 53300825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 8899638 - 8899683
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  8899638 attgaatgttagtctcacccttaccttggaatataaaaatcgcagc 8899683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 38961184 - 38961139
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  38961184 attgaatgttagtctcacccttaccttggaatataaaaatcgcagc 38961139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 43549695 - 43549630
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtgat 242  Q
    ||||| ||||||||||||||||| |||||| |||||||||  |||||||||||| ||||| |||||    
T  43549695 cttaagaagattgaatgttagtcccaccctaaccttagaaagtgaaaatcgcagactctaagtgat 43549630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 184018 - 183954
Alignment:
Q  173 cagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||||  |||| || ||||||||||||||||||||| || |||||||||||||||||||    
T  184018 cagacttaatagaattgcaaagttagtctcacccttaccttataagatgaaaatcgcagcctcta 183954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 11299764 - 11299708
Alignment:
Q  176 acttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||| |||| || ||||||||||||||||||||||||| |||||||||||||    
T  11299764 acttaataaaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 11299708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11855610 - 11855650
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  11855610 gttagtctcacccttaccttagaatgtgaaaatcgcagcct 11855650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 20697692 - 20697632
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  20697692 acagacttaatagaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 20697632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 26054484 - 26054417
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| | || ||||| || |||||||||||||||||||||||||||| |  ||||||||||||||    
T  26054484 tcagaatcataggcttaagaatattgaatgttagtctcacccttaccttaaagaatgaaaatcgcagc 26054417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 1464709 - 1464629
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaat--tacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    ||||| || |||||||||||||| |||||||||  ||| || ||||||| ||||| || |||||||||||||||||||||||    
T  1464709 aatcctacacttgttaaatttaaccatcagaatcataccga-ttaataaaattgattgctagtctcacccttaccttagaat 1464629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 12340624 - 12340662
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  12340624 gttagtctcacccttaccttagaatgtgaaaatcgcagc 12340662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 17346968 - 17346930
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  17346968 gttagtctcacccttaccttagaatgtgaaaatcgcagc 17346930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 37250384 - 37250314
Alignment:
Q  147 cttgttaaatttaatcatcagaattacag-acttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    ||||||||||  || ||||||||||| |  ||||||||  |||||||||||||||||||||||||||||||    
T  37250384 cttgttaaatacaaccatcagaattatactacttaatagaattgaatgttagtctcacccttaccttagaa 37250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 2044883 - 2044839
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  2044883 attgaatgttagtctcacccttaccttagca-atgaaaatcgcagc 2044839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 2047612 - 2047568
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  2047612 attgaatgttagtctcacccttaccttagca-atgaaaatcgcagc 2047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 13919756 - 13919820
Alignment:
Q  149 tgttaaatttaatcatcagaatta-cagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  13919756 tgttaaatctaatcatcagaattatcag-cttaagagaattgaatgttagtctcacccttacctta 13919820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 16644951 - 16645012
Alignment:
Q  152 taaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| |||| |||||||  |||| ||||| ||||||||||||||||| |||||||||||||    
T  16644951 taaatctaattatcagaaacacaggcttaagaagattgaatgttagtcccacccttacctta 16645012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 325066 - 325130
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||| ||||| |||||||||||||    
T  325066 tgttaaatctaattatcagaatcataggcttaagaagattgaatgctagtcccacccttacctta 325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 605603 - 605519
Alignment:
Q  132 aaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    ||||| ||||| || |||||||||| ||||||||| | ||| | | ||||||  ||| |||| ||||||||||||||||||||||    
T  605603 aaaaccaatcctacacttgttaaatctaatcatcatagttatatagttaatagaattaaatgctagtctcacccttaccttagaa 605519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 17444110 - 17444066
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcag 230  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||    
T  17444110 attgaatgttagtcccacccttaccttggaatataaaaatcgcag 17444066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 22792179 - 22792219
Alignment:
Q  178 ttaataagattgaatgttagtctcacccttaccttagaata 218  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  22792179 ttaataaaattgaatgctagtctcacccttaccttagaata 22792219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 24152450 - 24152386
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||  ||||||||||||||||| |||||||||||||    
T  24152450 tgttaaatctaattatcagaatcataggcttaggaagattgaatgttagtcccacccttacctta 24152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 18439377 - 18439476
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| ||||||| ||||| | ||||||||||||| | |  ||||||  |||| | |||||||||||||||| |||| |  |||||||||||||||||||    
T  18439377 aatcctacccttgctaaatatgatcatcagaattatatagattaatagaattgtaagttagtctcacccttatcttataggatgaaaatcgcagcctcta 18439476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 25475663 - 25475568
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    ||||| || |||| ||||| | ||||||||||||||| |  ||||||  |||| | ||||||||||||||||||||| |  |||||||||||||||    
T  25475663 aatcctacacttgctaaatatgatcatcagaattacatagattaatagaattgtaagttagtctcacccttaccttataggatgaaaatcgcagcc 25475568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 45798087 - 45798134
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  45798087 gaattacagaattaatagaattgaatgctagtctcacccttaccttag 45798134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 12851592 - 12851542
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||| ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  12851592 attgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcctcta 12851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 17488729 - 17488798
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||| ||||||||||||  |||| || |||||||||||||||||||||  | |||||||||||||||||||    
T  17488729 gaatcacagacttaatagaattgcaaagttagtctcacccttacctta-tagatgaaaatcgcagcctcta 17488798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 17500211 - 17500280
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||| ||||||||||||  |||| || |||||||||||||||||||||  | |||||||||||||||||||    
T  17500211 gaatcacagacttaatagaattgcaaagttagtctcacccttacctta-tagatgaaaatcgcagcctcta 17500280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 37641553 - 37641503
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  37641553 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 37641503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 5224325 - 5224374
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  5224325 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 5224374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 12400071 - 12400135
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || |||||||| |||||||||||||||| || |||||||||||||||    
T  12400071 acagacttaatagaattgcaaagttagtcttacccttaccttagaatgtg-aaatcgcagcctcta 12400135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 13209549 - 13209508
Alignment:
Q  195 tagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||| | | ||||||||||||||||||    
T  13209549 tagtctcacccttaccttaaagtgtgaaaatcgcagcctcta 13209508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 13938327 - 13938282
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||| || |||||||||||| |||||| |||||||||||    
T  13938327 attgaatgttattcccacccttaccttggaatataaaaatcgcagc 13938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 14641733 - 14641676
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctt 69  Q
    ||||| ||| |||| || |||||| |||||||  ||||||||||||||||||||||||    
T  14641733 gattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 14641676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 52465407 - 52465370
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  52465407 cttaagaagattgaatgttagtcacacccttaccttag 52465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 55477413 - 55477457
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  55477413 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 55477457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 11423985 - 11423945
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    |||||| |||||||||||||| || ||||||||||||||||    
T  11423985 gttagtttcacccttaccttataagatgaaaatcgcagcct 11423945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 14576082 - 14576026
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaa 223  Q
    |||| |||||||||||||  ||| | ||||||||||||||||||||| || ||||||    
T  14576082 gaatcacagacttaataatgttgcaagttagtctcacccttaccttataagatgaaa 14576026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 14294832 - 14294701
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  14294832 taaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccctta 14294733  T
Q  209 ccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||| |||||||||||||||||||||    
T  14294732 ccttagaataagaaaatcgcagcctctatgtg 14294701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 51131404 - 51131535
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  51131404 taaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccctta 51131503  T
Q  209 ccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||| |||||||||||||||| ||||    
T  51131504 ccttagaataagaaaatcgcagcctctgtgtg 51131535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 50687442 - 50687562
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| ||| || ||||| |||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  50687442 tcatcaatttctccctttaacc-taattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaataagattgaa 50687540  T
Q  192 tgttagtctcacccttacctta 213  Q
    || ||||||||| |||||||||    
T  50687541 tgctagtctcactcttacctta 50687562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 21342927 - 21343043
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||    
T  21342927 aatttctcactttaaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgcta 21343026  T
Q  197 gtctcacccttacctta 213  Q
    ||| |||||||||||||    
T  21343027 gtcccacccttacctta 21343043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 21347792 - 21347908
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||    
T  21347792 aatttctcactttaaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgcta 21347891  T
Q  197 gtctcacccttacctta 213  Q
    ||| |||||||||||||    
T  21347892 gtcccacccttacctta 21347908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 27652512 - 27652388
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| ||||  |||||||| ||| ||| ||||||||| | || |||||||||||||||||||||||||||||||||||||  ||||||    
T  27652512 tcatcaatttctcactttaact-taattctccaattctctaaaactaattctacacttgttaaatttaatcatcagaattacagacttaatagaattgaa 27652414  T
Q  192 tgttagtctcacccttaccttagaat 217  Q
    || |||||||||||||||||||||||    
T  27652413 tgctagtctcacccttaccttagaat 27652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 50613360 - 50613217
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||  ||||| |||||||||||||||| |  || ||||| ||||| || ||||||||||  ||  |||| |||||||||||||||| |||||||    
T  50613360 tcatcaatttatcactttaaccctaattctcaacttttctaaaacaaatcctacacttgttaaatacaacaatcataattacagacttaataggattgaa 50613261  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||    
T  50613260 tgttagtctcacccttaccttagaaaatcgaaatcgcagcctct 50613217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 50621188 - 50621045
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||  ||||| |||||||||||||||| |  || ||||| ||||| || ||||||||||  ||  |||| |||||||||||||||| |||||||    
T  50621188 tcatcaatttatcactttaaccctaattctcaacttttctaaaacaaatcctacacttgttaaatacaacaatcataattacagacttaataggattgaa 50621089  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||    
T  50621088 tgttagtctcacccttaccttagaaaatcgaaatcgcagcctct 50621045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 16093141 - 16093018
Alignment:
Q  93 catcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaat 192  Q
    |||||||| |||||| |||||||||||||||||| ||| ||||  ||||| || || |||||||||||| ||  |||| | ||||||||||| |||||||    
T  16093141 catcaatttctcactttaaccctaattctcaaattctctaaaatcaatcctacactggttaaatttaattatatgaatcatagacttaataaaattgaat 16093042  T
Q  193 gttagtctcacccttaccttagaa 216  Q
    |||||||||||||||||| |||||    
T  16093041 gttagtctcacccttaccatagaa 16093018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 16381965 - 16382087
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccac-ccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||  | ||||||||  || |||  |||||||||||||||||  |||||    
T  16381965 tcatcaattcctcactttaaccctaattctcaaatcctcaaaaactaatcctacaacatgttaaatacaaccatatgaattacagacttaatagaattga 16382064  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| ||||| |||||||||||||    
T  16382065 atgctagtcccacccttacctta 16382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 43629416 - 43629297
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctcca-aaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | |||  ||| |||||| || ||| ||||||| ||||||||||||||||||||||||||||||||    
T  43629416 tcatcaattcctcactttaacc-taattctccaa-cttccttaaattaatcctactcttattaaatt-aatcatcagaattacagacttaataagattga 43629320  T
Q  191 atgttagtctcacccttacctta 213  Q
    |||||||||||||||||||||||    
T  43629319 atgttagtctcacccttacctta 43629297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 15859420 - 15859317
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccac-ccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | |||||||  ||||||||||||||||||||||||||  ||| |||| |||||||||||||    
T  15859420 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacagacttaatagaattaaatgctagtctcaccctt 15859323  T
Q  208 acctta 213  Q
    ||||||    
T  15859322 acctta 15859317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 20919478 - 20919544
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctctat 237  Q
    ||||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  20919478 acagacttaatagaattgcaaagttagtctcacccttaccttagaatatgaaaatcgcagcctctat 20919544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 48444416 - 48444470
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  48444416 attgaatgttagtcccacccttaccttagaataagaaaatcgcagcctctatgtg 48444470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 48521342 - 48521463
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||||| | |||||||||| ||| ||| |||||||| ||  |  | |||||||| |||| |||||||| |||| ||||| ||||||||    
T  48521342 tcatcaattcctcactcttaacctaattctccaattctc-aaaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattga 48521440  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||||||||| |||||||||||||    
T  48521441 atgttagtcccacccttacctta 48521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 21683883 - 21683948
Alignment:
Q  148 ttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||| ||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  21683883 ttgttaaatctaaccatcagaattatagacttaagaaaattgaatgttagtctcacccttacctta 21683948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 20926601 - 20926669
Alignment:
Q  173 cagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||  |||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  20926601 cagacttaatagaattgcaaagttagtctcaaccttaccttagaatatgaaaatcgcagcctctatgtg 20926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 52940091 - 52940027
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| || ||||| ||||||||||||||||||||| |||||||||    
T  52940091 tgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtctcactcttacctta 52940027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 13880602 - 13880538
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| |||| ||||| ||||||||||||||||| |||||||||||||    
T  13880602 tgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 13880538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 20959017 - 20959081
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  20959017 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 45574056 - 45573997
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| ||||||||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  45574056 cttaagaagattgaatgttagtcccacccttaccttagaaagtgaaaatcgcagactcta 45573997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 7052197 - 7052139
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  7052197 gattattttacaacctgaacaccaattattaccttaattcatcagattacctactcttt 7052139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 17901986 - 17901928
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| ||| |||||| |||||||||||||||    
T  17901986 gattattctacaacctgaacaccaattattaccttagttcatcggattatctactcttt 17901928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 52927279 - 52927230
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  52927279 attgaatgttagtctcacccttaccttagca-atgaaaatcgcagcctcta 52927230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 21473819 - 21473864
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||    
T  21473819 attgaatgctagtctcacccttaccttagaataagaaaatcgcagc 21473864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 22125186 - 22125251
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||||||||| | || ||||| |||||||||||||| || ||||||||||||||    
T  22125186 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttactcccacccttaccttag 22125251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 22777347 - 22777431
Alignment:
Q  147 cttgttaaatttaatcatcagaattaca-gacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||| ||||||||||||||| | | ||||| || ||||||||||||||||||||| |||||| || || |||||||||||    
T  22777347 cttgttaaatctaatcatcagaattataaggcttaagaaaattgaatgttagtctcaccctaaccttataa-atcaaaatcgcagc 22777431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 40129706 - 40129751
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  40129706 attgaatgttagtctcacccttaccttggaatataaaaatcgcagc 40129751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 20453700 - 20453636
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||| ||| | || ||||| |||||||||||||||||||||||||||||||    
T  20453700 tgttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta 20453636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 35260385 - 35260277
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||| ||| ||| ||||  ||||  || ||||||||||  || ||||| ||||| | | |||||||  ||||||||||||||||||||||    
T  35260385 taaccctaattctccaattctctaaaatcaatcttacacttgttaaatacaaccatcaaaattatacagcttaatagaattgaatgttagtctcaccctt 35260286  T
Q  208 accttagaa 216  Q
    |||||||||    
T  35260285 accttagaa 35260277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 12272420 - 12272540
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctc-caaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | || | ||| |||||| || ||||||||||| |||||||||||  | | |||||||||||||||    
T  12272420 tcatcaattcctcactttaacc-taattctccaa-cttctctaaattaatcctacacttgttaaatt-aatcatcagaagaaaaaacttaataagattga 12272516  T
Q  191 atgttagtctcacccttaccttag 214  Q
    ||| ||||| ||| ||||||||||    
T  12272517 atgctagtcgcactcttaccttag 12272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 16696668 - 16696629
Alignment:
Q  201 cacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16696668 cacccttaccttagaataagaaaatcgcagcctctatgtg 16696629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 21042569 - 21042502
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||||| |||| |||| ||| | || ||||| ||||||||||||||||| ||||||||||||||||    
T  21042569 tgttaaatctaattatcataatcataggcttaagaagattgaatgttagtcccacccttaccttagaa 21042502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 21243921 - 21243858
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctttttaca 75  Q
    |||||||||||||| ||||||||| ||||||   ||||||||| ||||||||||||||| ||||    
T  21243921 gattattctacaacctgaacaccaattattaacctaattcatcggattatctactctttctaca 21243858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 22122272 - 22122149
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | | ||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  22122272 taaccctaattctcaaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 22122173  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  22122172 accttggaatataaaaatcgcagc 22122149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 41231045 - 41230922
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| |  ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  41231045 taaccctaattctcaaattctcaaaaactaaacttacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 41230946  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  41230945 accttggaatataaaaatcgcagc 41230922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 24723644 - 24723586
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||| ||||  ||||||||    
T  24723644 gattattctacaacctgaacaccaattattaccttaattcatcatattacatactcttt 24723586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 47191467 - 47191553
Alignment:
Q  128 ctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||||||||| ||  | |||||||| ||||||||||||| | || ||||| || | |||||||||||| |||||||||||||    
T  47191467 ctccaaaactaatcctacaacatgttaaatctaatcatcagaatcataggcttaagaaaactgaatgttagtcccacccttacctta 47191553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 27249960 - 27249919
Alignment:
Q  195 tagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  27249960 tagtctcacccttaccttaaaatgtgaaaatcgcagcctcta 27249919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 40390153 - 40390246
Alignment:
Q  121 tcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||| ||| ||||| ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||    
T  40390153 tcaaattctctaaaaccaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 40390246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 41049293 - 41049169
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattga 190  Q
    ||||||||| |||||| |||||||||||  ||| | |||||||  |||||| || |||||| |||  || ||||| ||||| | | |||||||  |||||    
T  41049293 tcatcaatttctcactttaaccctaatttccaacttctccaaat-taatcctacacttgttgaatacaaccatcataattatacaacttaatagaattga 41049195  T
Q  191 atgttagtctcacccttaccttagaa 216  Q
    ||| ||||||||||||||||||||||    
T  41049194 atgctagtctcacccttaccttagaa 41049169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 22921096 - 22921064
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaata 218  Q
    |||||||||||||||||||||||||||||||||    
T  22921096 attgaatgttagtctcacccttaccttagaata 22921064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 33681909 - 33681945
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgca 229  Q
    ||||||||||||||||||||||||||||| |||||||    
T  33681909 gttagtctcacccttaccttagaatatgagaatcgca 33681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 13212274 - 13212192
Alignment:
Q  132 aaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| ||||| || ||||||||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||    
T  13212274 aaaaccaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 13212192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 14801392 - 14801442
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| ||||| ||||||||||||||||| |||| ||||||||    
T  14801392 atcagaatcacaggcttaagaagattgaatgttagtcccacctttacctta 14801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 14810266 - 14810316
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| ||||| ||||||||||||||||| |||| ||||||||    
T  14810266 atcagaatcacaggcttaagaagattgaatgttagtcccacctttacctta 14810316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 21239227 - 21239169
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||  ||||||||| ||||||| ||| |||||| ||||| |||||||||    
T  21239227 gattattctacaaactgaacaccaattattaccttagttcatcggattacctactcttt 21239169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 23818532 - 23818490
Alignment:
Q  194 ttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||||||||||||| |  |||||||||||||||||||    
T  23818532 ttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 23818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 26065847 - 26065932
Alignment:
Q  148 ttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    |||||||||  || ||||||||||| | | |||||||  |||||||| |||||||||||||||||||||| ||  ||||||||||||    
T  26065847 ttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttaccttagaa-attgaaatcgcagcct 26065932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 35980965 - 35980885
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaat--tacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    ||||| || |||||||||||||| |||||||||  ||| || ||||||  ||||| || |||||||||||||||||||||||    
T  35980965 aatcctacacttgttaaatttaaccatcagaatcataccga-ttaatataattgattgctagtctcacccttaccttagaat 35980885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 8276174 - 8276117
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctt 69  Q
    ||||| ||| |||| || |||||| |||||||  ||||||||||||||||||||||||    
T  8276174 gattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 8276117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 16759618 - 16759662
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||    
T  16759618 attgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 16759662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 22130075 - 22130026
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  22130075 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22130026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 38056857 - 38056800
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactctt 69  Q
    ||||| ||| |||| || |||||| |||||||  ||||||||||||||||||||||||    
T  38056857 gattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 38056800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 50209459 - 50209398
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  50209459 acagacttaatagaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 50209398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 27652543 - 27652515
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  27652543 tacatcaatctaacaatttttcatcaatt 27652515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 33798376 - 33798412
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgca 229  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  33798376 gttagtctcacccttaccttagaatgtgaagatcgca 33798412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 50687411 - 50687439
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  50687411 tacatcaatctaacaatttttcatcaatt 50687439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 351 - 220
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||||||||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  351 taaccctaattctcaaattctctaaaaccaatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccctta 252  T
Q  209 ccttagaatatgaaaatcgcagcctctatgtg 240  Q
     ||||||||| |||||||||||||||||||||    
T  251 tcttagaataagaaaatcgcagcctctatgtg 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 235
Target Start/End: Original strand, 25895 - 26072
Alignment:
Q  68 tttttacatcaatctaacaatttttcatcaatt-----------cctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaat 156  Q
    |||||||||||||||||||||||||||||||||           ||||||| ||||| |||||||||||| ||| ||||| ||||| || ||||||||||    
T  25895 tttttacatcaatctaacaatttttcatcaattaatcaccaattcctcactttaacc-taattctcaaattctctaaaaccaatcctacacttgttaaat 25993  T
Q  157 ttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||    
T  25994 ttaatcatcagaattacaggcttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcgcagcctct 26072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 72551 - 72640
Alignment:
Q  134 aactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaa 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  72551 aactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagatgaaa 72640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 46308 - 46215
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  46308 cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcagtctctatgtg 46215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 14718 - 14655
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||| |||| || ||||||||||||||||||||| || |||||||||||||||||||    
T  14718 agacttaataaaattgcaaagttagtctcacccttaccttaaaaaatgaaaatcgcagcctcta 14655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 2863 - 2983
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| ||||| ||| ||||||||  || ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  2863 tcatcaatttctcactttaacc-taactctcaaattatctaaaactaatcctacacttgttaaatttaatcatcagaattaaagacttaataagattgaa 2961  T
Q  192 tgttagtctcacccttacctta 213  Q
    || |||||||||||||||||||    
T  2962 tgctagtctcacccttacctta 2983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 39168 - 39311
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||||||||||| |  || ||||| ||||| || ||||||||||  || ||| ||||||||||||||||||||||||||    
T  39168 tcatcaatttctcactttaaccctaattctcaacttttctaaaacaaatcctacacttgttaaatacaaccattagaattacagacttaataagattgaa 39267  T
Q  192 tgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    || |||||||||||||||||||||| ||  |||||| |||||||    
T  39268 tgctagtctcacccttaccttagaaaatcgaaatcgtagcctct 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 213
Target Start/End: Original strand, 7518 - 7627
Alignment:
Q  103 tcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctca 202  Q
    ||||| |||||||||||||||||| ||| ||| | ||||| || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  7518 tcactataaccctaattctcaaattctctaaacc-aatcctacacttgttaaatttaatcatcagaattacagacttaatagaattgaatgttagtctca 7616  T
Q  203 cccttacctta 213  Q
    |||||||||||    
T  7617 cccttacctta 7627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 5581 - 5437
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||| ||  ||| | ||| ||||||||||| || ||||||||||  || ||||||||||||||||||||||||||||||    
T  5581 tcatcaatttctcactttaaccctagtttccaacttctctaaaactaatcctacacttgttaaatacaaccatcagaattacagacttaataagattgaa 5482  T
Q  192 tgttagtctcacccttacctt-agaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||    
T  5481 tgttagtctcacccttaccttgataatttg-aaatcgcagcctcta 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 1371 - 1494
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||||||  ||| | ||| ||| ||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||    
T  1371 tcatcaatttctcactttaaccctaatttccaacttctctaaa-ctaatcctacacttgttaaattcaatcatcagaattatagacttaataagattgaa 1469  T
Q  192 tgttagtctcacccttaccttagaa 216  Q
    || ||||||||||||||||||||||    
T  1470 tgctagtctcacccttaccttagaa 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 22619 - 22494
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| ||||| |||||||||||| ||| |||||||| || || ||||||||||  || |||||||||||||||||||||| ||||| |    
T  22619 tcatcaatttctcactttaacc-taattctcaaattctctaaaactaaccctacacttgttaaataaaaccatcagaattacagacttaataggattgca 22521  T
Q  192 tgttagtctcacccttaccttagaata 218  Q
    || ||||||||||||||||||||||||    
T  22520 tgctagtctcacccttaccttagaata 22494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 17486 - 17365
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    ||||||||| |||||| |||||||| ||  ||| | | | ||||||||||| || ||||||||||  || ||||||||||||||||||||||||||||||    
T  17486 tcatcaatttctcactttaaccctagtttccaacttcactaaaactaatcctacacttgttaaatacaaccatcagaattacagacttaataagattgaa 17387  T
Q  192 tgttagtctcacccttacctta 213  Q
    ||||||||||||||||||||||    
T  17386 tgttagtctcacccttacctta 17365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 13806 - 13838
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaata 218  Q
    |||||||||||||||||||||||||||||||||    
T  13806 attgaatgttagtctcacccttaccttagaata 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 887 - 1008
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaa 191  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||| || || | |||||||| ||||||||| ||||| |||||||| || ||||||    
T  887 tcatcaattcttcactttaaccctaattctcaaatcctcaaaaactaaacctacacatgttaaatctaatcatcataattatagacttaagaaaattgaa 986  T
Q  192 tgttagtctcacccttacctta 213  Q
    || ||||| || ||||||||||    
T  987 tgctagtcccagccttacctta 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 84575 - 84443
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctcca-aaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | |||  ||| |||||| || ||||||||| | ||||||||||||||||||||||||||||||||    
T  84575 tcatcaattcctcactttaacc-taattctccaa-cttccttaaattaatcctactcttgttaaagt-aatcatcagaattacagacttaataagattga 84479  T
Q  191 atgttagtctcacccttaccttagaatatgaaaatc 226  Q
    ||| |||||||||||||||||| |||||| ||||||    
T  84478 atgctagtctcacccttaccttggaatataaaaatc 84443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 447401 - 447465
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  447401 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 447465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 498311 - 498375
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| |||| ||||||||    
T  498311 tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccaccattacctta 498375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 163619 - 163530
Alignment:
Q  151 ttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||| |||||||| | || ||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  163619 ttaaatttaattatcagaatcataggcttaagaagattgaatgttagtctcaccgttaccttagaataagaaaatcgcaacctctatgtg 163530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 160342 - 160251
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||| |||| |||||||| | || ||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  160342 tgttaaatctaattatcagaatcataggcttaagaagagtgaatgttagtcttacccttaccttagaataagaaaatcgcagcctctatgtg 160251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 17225 - 17107
Alignment:
Q  95 tcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatg 193  Q
    |||||| |||||| |||||||||||||| ||| ||| ||||  ||||| |||||||||||||  || ||||||||||| | |  ||||||  ||||||||    
T  17225 tcaatttctcact-taaccctaattctccaattctctaaaatcaatcctacccttgttaaatacaaccatcagaattatatagattaatagaattgaatg 17127  T
Q  194 ttagtctcacccttacctta 213  Q
     |||||||||||||||||||    
T  17126 ctagtctcacccttacctta 17107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 2630 - 2696
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  2630 cttgttaaatctaatcatcagaattatagacttaagaagattgaatgttagtctcacccttacctta 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 29564 - 29698
Alignment:
Q  97 aattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgtta 196  Q
    |||| |||||| |||||||||||||||||| ||| ||||| ||||| || |||||||| |  || |    |||||||||| ||||||  |||||||| ||    
T  29564 aatttctcactttaaccctaattctcaaattctctaaaaccaatcctacacttgttaattacaaccgattgaattacagaattaatagaattgaatgcta 29663  T
Q  197 gtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||| |||||||||||||    
T  29664 gtctcacccttaccttagaatgtgaaaatcgcagc 29698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 79301 - 79367
Alignment:
Q  152 taaatttaatcatcagaatt-acagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  79301 taaatttaatcattagaatttacagacttaataagattgaatgttagtctcacccttaccttagaat 79367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 203607 - 203522
Alignment:
Q  147 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||| ||| ||||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||   |||||||||||    
T  203607 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttataattccaaaatcgcagc 203522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 78904 - 78989
Alignment:
Q  74 catcaatctaacaatttttcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaa 160  Q
    ||||||| |||||||||||||||||||  ||||| ||| ||||||| |||||||||| ||||| ||||| || ||| ||||||||||    
T  78904 catcaatataacaatttttcatcaattaatcactttaa-cctaattttcaaatcctctaaaaccaatcctacacttattaaatttaa 78989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 12838 - 12927
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcg 227  Q
    ||||| || ||||||||||  || ||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||    
T  12838 aatcctacacttgttaaatacaaccatcagaattacagacttaatagaattgtaagttagtctcacccttaccttagaatatgaaaatcg 12927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 86435 - 86511
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  86435 taatcctacacttgttaaatt-aatcatcagaattacagacttaataggattgaatgctagtctcacccttaccttag 86511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 191902 - 191797
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||| |||||| ||| |||||||| || ||  | |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||    
T  191902 taaccctaatt-tcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctt 191804  T
Q  208 accttag 214  Q
    |||||||    
T  191803 accttag 191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 18963 - 18857
Alignment:
Q  103 tcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctc 201  Q
    ||||| ||||||||||| || ||| ||| ||||||||||| ||  |||||||||| ||||||||||||||| |||||||| || ||||||||||||||||    
T  18963 tcactttaaccctaatt-tccaattctcaaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctc 18865  T
Q  202 acccttac 209  Q
    ||||||||    
T  18864 acccttac 18857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 2155 - 2217
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    |||||||||||||||| || ||||||||||||||||||||  |  || |||||||||||||||    
T  2155 agacttaataagattgcaaagttagtctcacccttaccttgtatgattaaaatcgcagcctct 2217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 8132 - 8194
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    |||||||||||||||| || ||||||||||||||||||||  |  || |||||||||||||||    
T  8132 agacttaataagattgcaaagttagtctcacccttaccttgtatgattaaaatcgcagcctct 8194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 62450 - 62330
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctc-caaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||||||||| ||||| |||||||| || | || | ||| |||||| ||  |||||||||| |||||||||||||||||||||| |||||||||    
T  62450 tcatcaattcctcactttaacc-taattctccaa-cttctctaaattaatcctacatttgttaaatt-aatcatcagaattacagacttattaagattga 62354  T
Q  191 atgttagtctcacccttaccttag 214  Q
    ||| ||||||||||||||||||||    
T  62353 atgctagtctcacccttaccttag 62330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 58735 - 58785
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  58735 atcagaatcatagacttaataaaattgaatgttagtctcacccttacctta 58785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 2025 - 1971
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctact 66  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2025 gattattctacaacatgaacaccacttattaccttaattcatcagattatctact 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 333223 - 333289
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  333223 cttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttacctta 333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 66263 - 66205
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| ||| |||||| ||||| |||||||||    
T  66263 gattattctacaacctgaacaccaattattaccttagttcatcggattacctactcttt 66205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 17579 - 17450
Alignment:
Q  102 ctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctc 201  Q
    |||||| |||||||||||||||||| ||| ||||| ||||| || |||||||| |  || |    |||||||||| ||||||  |||||||| |||||||    
T  17579 ctcactttaaccctaattctcaaattctctaaaaccaatcctacacttgttaattacaaccgattgaattacagaattaatagaattgaatgctagtctc 17480  T
Q  202 acccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||| | |||||||||||    
T  17479 acccttaccttagaatgtaaaaatcgcagc 17450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 16556 - 16602
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgt 239  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  16556 gttagtctcacccttaccttataatcagaaaatcgcagcctctatgt 16602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 17620 - 17592
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  17620 tacatcaatctaacaatttttcatcaatt 17592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 11866 - 11913
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11866 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 11913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 15376 - 15423
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15376 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 15423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 16190 - 16085
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||| ||   || ||||||||||| ||  |||| ||||| |||||||| |||||| |||||||| || ||||||||||||||||||||||    
T  16190 taaccctaattctccaactttcaaaaactaatcctacaacttgctaaatctaatcatccgaattatagacttaagaaaattgaatgttagtctcaccctt 16091  T
Q  208 acctta 213  Q
    ||||||    
T  16090 acctta 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 25377 - 25272
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||| ||   || ||||||||||| ||  |||| ||||| |||||||||||||||  ||||||| || ||||||||||||||||||||||    
T  25377 taaccctaattctccaactttcaaaaactaatcctacaacttgctaaatctaatcatcagaattatcgacttaagaaaattgaatgttagtctcaccctt 25278  T
Q  208 acctta 213  Q
    ||||||    
T  25277 acctta 25272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 28762 - 28696
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||    
T  28762 cttgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtcccacccttacctta 28696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 25550 - 25453
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| || |||| |||||  |||||||||||||||||||||||||  |||| | ||||||||||||||||||||| || || ||||||||||||||||    
T  25550 aatcctacacttgctaaatacaatcatcagaattacagacttaatagaattgtaagttagtctcacccttacctta-aaaattaaaatcgcagcctcta 25453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 13060 - 13006
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  13060 attgaatgttagtcccacccttaccttagaataagaaaatcgcagcctctatgtg 13006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 23105 - 23171
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||||| |||| |||||||| | ||  |||| ||||||||||||||||| ||||||||||||||||    
T  23105 tgttaaatctaattatcagaatcataggattaagaagattgaatgttagtc-cacccttaccttagaa 23171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 102910 - 102769
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatccc-acccttgttaaatttaatcatcagaattacagac-ttaataagattg 189  Q
    ||||||||| |||||  ||||||||||||||  || ||| |||| | ||||| || ||||||||||  || ||||||||||| | |  ||||||  ||||    
T  102910 tcatcaatttctcaccttaaccctaattctcccattctctaaaa-tcatccctacacttgttaaatacaaccatcagaattatatagattaatagaattg 102812  T
Q  190 aatgttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    |||| ||||||||||||||||||| || || |||||||||||||    
T  102811 aatgctagtctcacccttaccttataa-atcaaaatcgcagcct 102769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 14250 - 14307
Alignment:
Q  151 ttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    |||||| |||| |||||||| | || ||||| ||||||||||||||||| ||||||||    
T  14250 ttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctta 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 12211 - 12265
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgtg 240  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  12211 attgaatgttagtcccacccttaccttagaataagaaaatcgcagcctctatgtg 12265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 9772 - 9853
Alignment:
Q  132 aaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| || || | |||||||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  9772 aaaactaaacctacacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 9853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 904 - 969
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||||||    
T  904 acagacttaatagaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 37364 - 37283
Alignment:
Q  132 aaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| || || | |||||||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  37364 aaaactaaacctacacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 37283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 167212 - 167174
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||||||||    
T  167212 gttagtctcacccttaccttagaatatgaaaatcgcagc 167174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 195 - 259
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| ||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||    
T  195 tgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtcgcacccttacctta 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 10725 - 10789
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||||||||||||||||||  | ||||| ||||||||||||||||| |||||||||||||    
T  10725 tgttaaatttaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 220436 - 220334
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctta 208  Q
    ||||||||||| |||||| ||| |||||||| || ||| | ||||||| ||||||||||||| | || ||||| ||||||||||||||||| ||||||||    
T  220436 taaccctaatt-tcaaattctcaaaaactaaacctaccat-gttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccaccctta 220339  T
Q  209 cctta 213  Q
    |||||    
T  220338 cctta 220334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 268545 - 268621
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||| || |||||||||| |||||||||||||||||| |||||||  |||||||  |||||||||||||||||||    
T  268545 taatcctacacttgttaaatctaatcatcagaattacaggcttaatataattgaataatagtctcacccttacctta 268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 13697 - 13647
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| | |||||||| || ||||| ||||||||||||||||||||||    
T  13697 atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 13647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 17321 - 17218
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| || |||| |||||  |||||||||||||| | |  ||||||  |||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  17321 aatcctacacttgctaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttagaataataaaatcgcagcctcta 17222  T
Q  237 tgtg 240  Q
    ||||    
T  17221 tgtg 17218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 32145 - 32212
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||| | || ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32145 tcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaaaatgtgaaaatcgcagc 32212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 4796 - 4917
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    ||||||||| |||||| ||||| |||||||||||| ||| ||||||||||| ||  | ||||||||  || ||||||||| | ||||||||||  |||||    
T  4796 tcatcaatttctcactttaacc-taattctcaaattctcaaaaactaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattga 4894  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| ||||| |||||||||||||    
T  4895 atgctagtcccacccttacctta 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 232
Target Start/End: Original strand, 14005 - 14142
Alignment:
Q  95 tcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatg 193  Q
    |||||| |||||  |||||||||||||| ||| ||| ||||  || || || ||||||||||  || ||||||||||| | |  ||||||  ||||||||    
T  14005 tcaatttctcaccttaaccctaattctctaattctctaaaatcaaacctacacttgttaaatacaaccatcagaattatatagattaatagaattgaatg 14104  T
Q  194 ttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
     |||||||||||||||||||||| || ||||||||||||    
T  14105 ctagtctcacccttaccttagaa-atcaaaatcgcagcc 14142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 15405 - 15325
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||| || ||||||||||  || ||||||||||| | |  ||||||  |||||||| ||||||||||||||||||||||    
T  15405 taatcctacacttgttaaatacaaccatcagaattatatagattaatagaattgaatgctagtctcacccttaccttagaa 15325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 21408 - 21466
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  21408 gattattctacaacctgaacaccaattattaccttaattcatcagattacctactcttt 21466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 1008 - 888
Alignment:
Q  112 ccctaattctcaaa-tcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttac 209  Q
    ||||||||||| || | ||| |||| |||||| || ||||||||||  || ||||||||||| | |  ||||||| |||||||| |||||||||||||||    
T  1008 ccctaattctccaacttctctaaaattaatcctacacttgttaaatacaaccatcagaattatatagattaataaaattgaatgctagtctcacccttac 909  T
Q  210 cttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||    
T  908 cttagaat-tgaaaatcgcagc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 1062 - 1130
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    |||||||| |||| || ||||| | || ||||| |||||||||||||||||||||||||||||||||||    
T  1062 tgttaaatctaattattagaatcataggcttaagaagattgaatgttagtctcacccttaccttagaat 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 185006 - 185129
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  185006 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccaccctt 185105  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| |||||||||||    
T  185106 accttggaatataaaaatcgcagc 185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 206773 - 206730
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  206773 gttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 206730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 7197 - 7260
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctt 212  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||    
T  7197 tgttaaatataatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 130780 - 130845
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  130780 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 130845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 59963 - 59883
Alignment:
Q  137 taatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||| || ||||||||||  || ||||||||||| | | |||||||  |||||||| ||||||||||||||||||||||    
T  59963 taatcctacacttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttaccttagaa 59883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 1545 - 1610
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| ||||||||||||| | || ||||| || |||||||||||||| |||| || ||||||    
T  1545 tgttaaatctaatcatcagaatcataggcttaagaatattgaatgttagtcccacctttgccttag 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 282 - 244
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||||||||    
T  282 gttagtctcacccttaccttagaatatgaaaatcgcagc 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 4523 - 4589
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||||||||| |  ||||| || ||||||||||||||| ||||||||||||    
T  4523 cttgttaaatctaatcatcagaattataagcttaagaaaattgaatgttagtctgacccttacctta 4589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 23188 - 23107
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| ||||||||||||| |  ||||||||||||||    
T  23188 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcacacccttacctta-acaatgaaaatcgcagc 23107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 13618 - 13552
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| | |||||||||||||||  | ||||| ||||||||||||||||| |||||||||||||    
T  13618 cttgttaagtctaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 13552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 21990 - 22048
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| || |||| |||||||||||||||| |||||||||    
T  21990 gattattctacaacctgaacaccaattcttaccttaattcatcagattacctactcttt 22048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 39153 - 39115
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  39153 gttagtctcacccttaccttagaatgtgaaaatcgcagc 39115  T

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Target: scaffold1137 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 1579 - 1514
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||||||| ||| |||||||||    
T  1579 gaatcacagacttaataaaattgcaaagttagtctcacccttaccttagaatgtgagaatcgcagc 1514  T

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Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 19349 - 19276
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacc-ttagaatatgaaaatcgcagcctcta 236  Q
    ||||||| | || ||||| |||||||||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  19349 tcagaatcataggcttaagaagattgaatgttagtctcacccttacctttaaagaatgaaaatcgcagcctcta 19276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 5352 - 5417
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||| || ||||||||||||||    
T  5352 gaatcacagacttaataaaattgcaaggttagtctcacccttaccttataagatgaaaatcgcagc 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 12934 - 12999
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||| || ||||||||||||||    
T  12934 gaatcacagacttaataaaattgcaaggttagtctcacccttaccttataagatgaaaatcgcagc 12999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 22886 - 22951
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||| || ||||||||||||||    
T  22886 gaatcacagacttaataaaattgcaaggttagtctcacccttaccttataagatgaaaatcgcagc 22951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 1682 - 1613
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||||| ||||||  |||| ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  1682 gaattacagaattaatagaattgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcctcta 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 11029 - 11094
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  11029 gaatcacagacttaatataattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 11094  T

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Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 63404 - 63469
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  63404 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 63469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 111 - 179
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctc 234  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| || |||||||||||||||||    
T  111 gaatcacagacttaatagaattgcaaagttagtctcacccttaccttataagatgaaaatcgcagcctc 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 2113 - 2232
Alignment:
Q  94 atcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaat 192  Q
    ||||||| |||||| ||||| |||||||||||| ||| ||||||||||| ||  | ||||||||  || ||| ||||| | ||||||||||  |||||||    
T  2113 atcaatttctcactttaacc-taattctcaaattctcaaaaactaatcctacaacctgttaaatacaaccattagaatcatagacttaatagaattgaat 2211  T
Q  193 gttagtctcacccttacctta 213  Q
    | ||||| |||||||||||||    
T  2212 gctagtcccacccttacctta 2232  T

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Target: scaffold0627 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 803 - 843
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  803 gttagtctcacccttaccttagaatgtgaaaatcgcagcct 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 13036 - 13100
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  13036 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 12242 - 12302
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||  |||| || |||||||||||||||||||| ||||||||||||||||||    
T  12242 acagacttaatagaattgcaaagttagtctcacccttaccttcgaatatgaaaatcgcagc 12302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 1060 - 1124
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  1060 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 15076 - 15020
Alignment:
Q  176 acttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||| |||| || ||||||||||||||||||||||||| |||||||||||||    
T  15076 acttaataaaattgcaaagttagtctcacccttaccttagaatgtgaaaatcgcagc 15020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 15453 - 15419
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcg 227  Q
    ||||||||||||||||||||||||| |||||||||    
T  15453 gttagtctcacccttaccttagaatgtgaaaatcg 15419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 18596 - 18668
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||| | || ||||| ||||||||||||||||| |||||||||||||    |||||||||||||||||||    
T  18596 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaatgaatgaaaatcgcagcctcta 18668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 10783 - 10854
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctctatgt 239  Q
    |||||||||| | ||||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||    
T  10783 gaattacagaatcaatagaattgaatgctagtctcacccttaccttagaat-caaaaatcgcagcctctatgt 10854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 1115 - 1051
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  1115 tgttaaatctaataatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 42674 - 42746
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||| | || ||||| ||||||||||||||||| ||||||||||||| |  ||||||||| |||||||||    
T  42674 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaaagaatgaaaatcacagcctcta 42746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 40255 - 40219
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  40255 cttaagaagattgaatgttagtcccacccttacctta 40219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 42283 - 42347
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | || ||||| ||||||||||||||||| |||||||||||||    
T  42283 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 4738 - 4670
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttaga 215  Q
    ||||||||| |||||||||||||||| |||||||| || |||| ||| || || |||||||||||||||    
T  4738 cttgttaaagttaatcatcagaattatagacttaagaaaattggatgctaatcccacccttaccttaga 4670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 7521 - 7643
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | ||||||||  |||  ||||||| | ||||| || |  ||||||||||||||||||||||    
T  7521 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattctcagaatcatagactcaagattattgaatgttagtctcaccctt 7620  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    |||||| |  ||||||||||||||    
T  7621 acctta-acaatgaaaatcgcagc 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 9679 - 9620
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| || ||||||||||||||||||||| |  |||||||||||||||    
T  9679 agacttaataagattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagcc 9620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 13459 - 13581
Alignment:
Q  110 aaccctaattctcaaa-tcctccaaaactaatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||||| || | ||| ||||  ||||| || ||||||||||  || ||||||||||| | |  ||||||  |||||||| |||||||||||||    
T  13459 aaccctaattctccaacttctctaaaatcaatcctacacttgttaaatacaaccatcagaattatataaattaatagaattgaatgctagtctcaccctt 13558  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    |||||||||| |||||||||||||    
T  13559 accttagaat-tgaaaatcgcagc 13581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 4018 - 4085
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaa 216  Q
    |||||||| |||| |||| ||| | || ||||| |||||| |||||||||||||||||||||||||||    
T  4018 tgttaaatctaattatcataatcataggcttaagaagattaaatgttagtctcacccttaccttagaa 4085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1401 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1401
Description:

Target: scaffold1401; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 1738 - 1672
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  1738 gaatcacagacttaataaaattgcaaagttagtctcacccttaccttataggatgaaaatcgcagcc 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 2682 - 2740
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||| ||||  ||||||||| ||||||| |||||||||||||||| |||||||||    
T  2682 gattattcaacaatctgaacaccaattattaccttaattcatcagattacctactcttt 2740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 305 - 247
Alignment:
Q  174 agacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| | ||||||||||||||||||||  |  |||||||||||||||    
T  305 agacttaataagattgcaagttagtctcacccttaccttgtatgatgaaaatcgcagcc 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 2108 - 2166
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    |||||||||||||| ||||||||| ||||||| ||| |||||| ||||| |||||||||    
T  2108 gattattctacaacctgaacaccaattattaccttagttcatcggattacctactcttt 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 12397 - 12447
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||||| | |||||||| ||||||||||| ||||||||||||||||||||    
T  12397 tcagaatcatagacttaagaagattgaatgctagtctcacccttaccttag 12447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 12880 - 12842
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  12880 gttagtctcacccttaccttagaatgtgaaaatcgcagc 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 178 - 140
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  178 gttagtctcacccttaccttagaatgtgaaaatcgcagc 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 33790 - 33669
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccac-ccttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    ||||||||| |||||| ||||| |||||||||||| ||| ||||||||||| ||  | ||||||||  || |||| |||| | ||||||||||  |||||    
T  33790 tcatcaatttctcactttaacc-taattctcaaattctcaaaaactaatcctacaacctgttaaatacaaccatcggaatcatagacttaatagaattga 33692  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||| ||||| || ||||||||||    
T  33691 atgctagtcccagccttacctta 33669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 31434 - 31370
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||  || ||||||||| | ||||||||||  |||||||| ||||| |||||||||||||    
T  31434 tgttaaatacaaccatcagaatcatagacttaatagaattgaatgctagtcccacccttacctta 31370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 33821 - 33793
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  33821 tacatcaatctaacaatttttcatcaatt 33793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 21761 - 21799
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  21761 gttagtctcacccttaccttagaatgtgaaaatcgcagc 21799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 97878 - 97999
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||  ||||| ||||| |||||||||||| ||| |||| |||||| ||  | ||||||||  || ||||||||| | ||||||||||  |||||    
T  97878 tcatcaatttatcactttaacc-taattctcaaattctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattga 97976  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||||||||  |||||||||||||    
T  97977 atgttagttccacccttacctta 97999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 107156 - 107277
Alignment:
Q  92 tcatcaattcctcactctaaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattga 190  Q
    |||||||||  ||||| ||||| |||||||||||| ||| |||| |||||| ||  | ||||||||  || ||||||||| | ||||||||||  |||||    
T  107156 tcatcaatttatcactttaacc-taattctcaaattctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattga 107254  T
Q  191 atgttagtctcacccttacctta 213  Q
    ||||||||  |||||||||||||    
T  107255 atgttagttccacccttacctta 107277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 97847 - 97875
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  97847 tacatcaatctaacaatttttcatcaatt 97875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 107125 - 107153
Alignment:
Q  72 tacatcaatctaacaatttttcatcaatt 100  Q
    |||||||||||||||||||||||||||||    
T  107125 tacatcaatctaacaatttttcatcaatt 107153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 7505 - 7549
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  7505 attgaatgttagtctcacccttaccttagaata-aaaaatcgcagc 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 14885 - 14929
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  14885 attgaatgttagtctcacccttaccttagaata-aaaaatcgcagc 14929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 26467 - 26395
Alignment:
Q  159 aatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||| |  ||||||  |||||||| |||||||||||||||||||| | ||||||||||||||    
T  26467 aatcatcagaattacataggttaatagaattgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 26395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 23897 - 23828
Alignment:
Q  167 gaattacagacttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    |||||||| | ||||||  |||| ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  23897 gaattacataattaatagaattgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcctcta 23828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 60751 - 60796
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||    
T  60751 attgaatgttagtcccacccttaccttggaatataaaaatcgcagc 60796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 2092 - 2028
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| |||| |||||||| | |  ||||| ||||||||||||||||| |||||||||||||    
T  2092 tgttaaatctaattatcagaatcataagcttaagaagattgaatgttagtcccacccttacctta 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 82984 - 83052
Alignment:
Q  149 tgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    |||||||| |||| || ||||| | || ||||| |||||||||||||| || |||||||||||||||||    
T  82984 tgttaaatctaattattagaatcataggcttaagaagattgaatgttaatcccacccttaccttagaat 83052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 6787 - 6893
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc--cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccct 206  Q
    |||||||||||||||||| ||| ||||||||  ||  |  | ||||||||  |||  |||||||||  ||||||| |  |||||||||||||||||||||    
T  6787 taaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaattaatgacttaagattattgaatgttagtctcaccct 6886  T
Q  207 tacctta 213  Q
    |||||||    
T  6887 tacctta 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 10337 - 10388
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttaccttag 214  Q
    |||||||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  10337 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 16966 - 16903
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||| |||| || ||||||||||||||||||||| | | ||||||||| ||||||||    
T  16966 agacttaataaaattgcaaagttagtctcacccttaccttaaagtgtgaaaatcgtagcctcta 16903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 18180 - 18141
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  18180 gttagtctcacccttaccttataatgtgaaaatcgcagcc 18141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 5361 - 5307
Alignment:
Q  176 acttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||  |||||||| |||||||||||||||||||| | ||||||||||||||    
T  5361 acttaatagaattgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 5307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 12031 - 11988
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  12031 gttagtctcacccttaccttaaagaatgaaaatcgcagcctcta 11988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 32930 - 32989
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||| || ||||||||||||||||| ||| |  |||||||||||||||    
T  32930 agacttaataagattgcaaagttagtctcacccttacattaaagaatgaaaatcgcagcc 32989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 8213 - 8138
Alignment:
Q  162 catcagaattaca-gacttaataagattgaat-gttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||||||||||||| |  ||||||| | ||||| ||||||||||||||||||||||   ||||||||||||||||||    
T  8213 catcagaattacaaggattaataaaactgaatcgttagtctcacccttaccttagttgatgaaaatcgcagcctct 8138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 542 - 476
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||||||  |||  ||||||| | || ||||| ||||||||||||| |||||||||||||||||    
T  542 cttgttaaatacaattttcagaatcataggcttaagaagattgaatgttcgtctcacccttacctta 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 21011 - 21054
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| |  |||||||||||||||||||    
T  21011 gttagtctcacccttaccttataggatgaaaatcgcagcctcta 21054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 19693 - 19735
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  19693 gttagtctcacccttacctta-aagatgaaaatcgcagcctcta 19735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 16435 - 16396
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  16435 gttagtctcacccttaccttataagatgaaaatcgcagcc 16396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 43273 - 43150
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    |||||||||||||||||| ||| |||||||| || ||  | |||||| |  |||  ||||||| | ||||| || |  |||||||||||||| |||||||    
T  43273 taaccctaattctcaaattctcaaaaactaaacctacaacatgttaagtacaatattcagaatcatagactcaagattattgaatgttagtcccaccctt 43174  T
Q  208 accttagaatatgaaaatcgcagc 231  Q
    ||||| |||||| ||||| |||||    
T  43173 accttggaatataaaaatggcagc 43150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 33337 - 33435
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||| || |||| |||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||| | |||||||||||||| ||||    
T  33337 aatcctacacttgctaaatacaatcatcagaattatataggttaatagaattgaatgctagtctcacccttaccttagca-atgaaaatcgcagcttcta 33435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 128169 - 128208
Alignment:
Q  174 agacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  128169 agacttaataagattgcaagttagtctcacccttacctta 128208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 6688 - 6630
Alignment:
Q  12 gattattctacaacatgaacaccacttattactttaattcatcagattatctactcttt 70  Q
    ||||| |||||||||||||||| | ||||||| ||||||||||  |||| |||||||||    
T  6688 gattactctacaacatgaacacgaattattaccttaattcatctaattacctactcttt 6630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 2798 - 2856
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||| |||| || ||||||||||||||||||||| |  ||||||||||||||    
T  2798 agacttaataaaattgcaaagttagtctcacccttaccttaaagaatgaaaatcgcagc 2856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 3985 - 4031
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    ||||||||||||||||||||||||||||||  ||  |||||||||||    
T  3985 attgaatgttagtctcacccttaccttagataatcgaaatcgcagcc 4031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 551 - 581
Alignment:
Q  183 aagattgaatgttagtctcacccttacctta 213  Q
    |||||||||||||||||||||||||||||||    
T  551 aagattgaatgttagtctcacccttacctta 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 28506 - 28464
Alignment:
Q  190 aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||||||||||| |  |||||||||||||||    
T  28506 aatgttagtctcacccttaccttaaagaatgaaaatcgcagcc 28464  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 1671 - 1629
Alignment:
Q  190 aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||||||||||||||||||||||| |  |||||||||||||||    
T  1671 aatgttagtctcacccttaccttaaagaatgaaaatcgcagcc 1629  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 44797 - 44863
Alignment:
Q  167 gaattacagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcc 232  Q
    |||| ||||||||||||  |||| || ||||||||||||||||||||| |  |||||||||||||||    
T  44797 gaatcacagacttaatagaattggaaagttagtctcacccttaccttataggatgaaaatcgcagcc 44863  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 54878 - 54812
Alignment:
Q  147 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||||| ||||||||| ||||| ||   ||| ||||||||||||||||| ||| |||||||||    
T  54878 cttgttaaatctaatcatcataattaaaggtataagaagattgaatgttagtcccactcttacctta 54812  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 50822 - 50729
Alignment:
Q  138 aatcccacccttgttaaatttaatcatcagaattacagac-ttaataagattgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||| || |||| |||||  |||||||||||||| | |  ||||||  |||||||| |||||||||||||||||||| | ||||||||||||||    
T  50822 aatcctacacttgctaaatacaatcatcagaattatatagattaatacaattgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 50729  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 47778 - 47824
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctctatgt 239  Q
    ||||||||||||||||||||| |||  |||||||||| |||||||||    
T  47778 gttagtctcacccttaccttaaaatcagaaaatcgcaacctctatgt 47824  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 22822 - 22872
Alignment:
Q  163 atcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||||| | |||||||| || ||||| ||||||||||||||||||||||    
T  22822 atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 22872  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 37723 - 37681
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcctct 235  Q
    ||||||||||||||||||||||   ||||||||||||||||||    
T  37723 gttagtctcacccttaccttagttgatgaaaatcgcagcctct 37681  T

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Target: scaffold2004 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 81 - 37
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||    
T  81 attgaatgctagtctcacccttaccttagagt-tgaaaatcgcagc 37  T

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Target: scaffold1296 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 2047 - 2096
Alignment:
Q  164 tcagaattacagacttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||||| | |||||||| |  ||||||||||||||||||||||||||||    
T  2047 tcagaatcatagacttaagattattgaatgttagtctcacccttacctta 2096  T

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Target: scaffold1052 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 142 - 206
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || |||||||||||||||||||||  | |||||||||||||||||||    
T  142 acagacttaatagaattgcaaagttagtctcacccttacctta-tagatgaaaatcgcagcctcta 206  T

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Target: scaffold0621 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 9437 - 9481
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||    
T  9437 attgaatgctagtctcacccttaccttagca-atgaaaatcgcagc 9481  T

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Target: scaffold0494 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 141 - 36
Alignment:
Q  109 taaccctaattctcaaatcctccaaaactaatcccacc-cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcaccctt 207  Q
    ||||||||||||||||||  || |||||||| || ||  | ||||||||  |||  ||||||| ||||||| || |  |||||||||||||| |||||||    
T  141 taaccctaattctcaaattttcaaaaactaaacctacaacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtcccaccctt 42  T
Q  208 acctta 213  Q
    ||||||    
T  41 acctta 36  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 11889 - 11934
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||||||||||||||| |||||| |||||| |||| ||||||    
T  11889 attgaatgttagtctcacccgtaccttggaatataaaaaacgcagc 11934  T

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Target: scaffold0305 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 21280 - 21344
Alignment:
Q  172 acagacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgcagcctcta 236  Q
    ||||||||||||  |||| || |||||||||||||||||||||  | |||||||||||||||||||    
T  21280 acagacttaatagaattgcaaagttagtctcacccttacctta-tagatgaaaatcgcagcctcta 21344  T

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Target: scaffold0273 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 8677 - 8636
Alignment:
Q  176 acttaataagattgaatgttagtctcacccttaccttagaat 217  Q
    ||||||||  |||||||| |||||||||||||||||||||||    
T  8677 acttaatagaattgaatgctagtctcacccttaccttagaat 8636  T

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Target: scaffold0231 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 11298 - 11342
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||    
T  11298 attgaatgctagtctcacccttaccttagaata-aaaaatcgcagc 11342  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 33864 - 33820
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaatatgaaaatcgcagc 231  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  33864 attgaatgttagtctcacccttacctta-tagatgaaaatcgcagc 33820  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 29314 - 29407
Alignment:
Q  121 tcaaatcctccaaaactaatcccacccttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 213  Q
    |||||| ||| ||||| ||||| || ||||||||||  |||||||||||||| | |  ||||||  ||||||||||||||||| | ||||||||    
T  29314 tcaaattctctaaaaccaatcctacacttgttaaataaaatcatcagaattatatagattaatagaattgaatgttagtctcatcattacctta 29407  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 9123 - 9160
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttaccttag 214  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  9123 cttaagaagattgaatgttagtcccacccttaccttag 9160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 9789 - 9750
Alignment:
Q  193 gttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  9789 gttagtctcacccttaccttagca-atgaaaatcgcagcct 9750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 72445 - 72481
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  72445 cttaagaagattgaatgttagtcccacccttacctta 72481  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 75061 - 75025
Alignment:
Q  177 cttaataagattgaatgttagtctcacccttacctta 213  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  75061 cttaagaagattgaatgttagtcccacccttacctta 75025  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 52447 - 52503
Alignment:
Q  174 agacttaataagattg-aatgttagtctcacccttaccttagaatatgaaaatcgca 229  Q
    |||||||||||||||| || ||||||||||||||||||||  |  ||||||||||||    
T  52447 agacttaataagattgcaaagttagtctcacccttaccttgtatgatgaaaatcgca 52503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 52309 - 52253
Alignment:
Q  178 ttaataagattgaat-gttagtctcacccttaccttagaatatgaaaatcgcagcct 233  Q
    ||||||| ||||||| |||||||||||||||||||||    ||||||||||||||||    
T  52309 ttaataaaattgaatcgttagtctcacccttaccttaattgatgaaaatcgcagcct 52253  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 15077 - 15045
Alignment:
Q  186 attgaatgttagtctcacccttaccttagaata 218  Q
    |||||||| ||||||||||||||||||||||||    
T  15077 attgaatgctagtctcacccttaccttagaata 15045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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