View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14561_high_3 (Length: 240)
Name: NF14561_high_3
Description: NF14561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14561_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 21725461 - 21725687
Alignment:
| Q |
10 |
catcaacaacacaaaatgagacatcaaacatgtaaataagttaggaaagctttcaaccaccgtagaatttgatcgtaaaaccaagtggtcgtcttaatat |
109 |
Q |
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| T |
21725461 |
catcaacaacacaaaatgagacatcaaacatgtaaataagctaggaaaactttcaaccaccgtagaatttgatcgtaaaatcaagtggtcgtcttaatat |
21725560 |
T |
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| Q |
110 |
tcaattaaataatttatcattacggaggacataaacatatgataatcttcaaaaagtaaaccaatctgaaaaatgcctattcaaattaataaatacatag |
209 |
Q |
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| T |
21725561 |
ttaattaaataatttatcattacggaggacataaacatatgataatcttcaaaaagtaaaccaatctgaaaaatgcctattcaaattaataaatacatag |
21725660 |
T |
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| Q |
210 |
caaaaacttccatcgcaaaaagacaat |
236 |
Q |
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| T |
21725661 |
caaaaacttccatcgcaaaaagacaat |
21725687 |
T |
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