View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14562_high_4 (Length: 320)

Name: NF14562_high_4
Description: NF14562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14562_high_4
NF14562_high_4
[»] chr5 (45 HSPs)
chr5 (6-257)||(24013290-24013541)
chr5 (257-320)||(38837670-38837733)
chr5 (258-320)||(12045804-12045866)
chr5 (258-320)||(12328226-12328288)
chr5 (258-320)||(36196471-36196533)
chr5 (257-320)||(4125187-4125250)
chr5 (257-320)||(8108859-8108922)
chr5 (258-320)||(618371-618433)
chr5 (258-320)||(746868-746930)
chr5 (258-320)||(7888874-7888936)
chr5 (258-320)||(16121839-16121901)
chr5 (258-320)||(16631874-16631936)
chr5 (256-320)||(26708583-26708647)
chr5 (256-320)||(26978317-26978381)
chr5 (258-320)||(2472714-2472776)
chr5 (258-320)||(10494814-10494876)
chr5 (258-320)||(15061050-15061112)
chr5 (258-320)||(17039631-17039693)
chr5 (255-320)||(23975712-23975778)
chr5 (258-320)||(28265475-28265537)
chr5 (258-320)||(36716200-36716262)
chr5 (256-320)||(25652581-25652645)
chr5 (259-318)||(17771969-17772028)
chr5 (258-320)||(7003730-7003792)
chr5 (258-320)||(8886851-8886913)
chr5 (258-320)||(13974078-13974140)
chr5 (258-320)||(35620344-35620405)
chr5 (257-318)||(36831889-36831950)
chr5 (258-320)||(5982722-5982785)
chr5 (257-320)||(20187940-20188003)
chr5 (258-320)||(23409057-23409120)
chr5 (258-313)||(40484128-40484183)
chr5 (258-320)||(24138841-24138903)
chr5 (258-320)||(17986806-17986868)
chr5 (258-320)||(33818561-33818623)
chr5 (258-302)||(29727895-29727939)
chr5 (258-320)||(10420252-10420314)
chr5 (258-312)||(13620127-13620181)
chr5 (258-320)||(17036412-17036474)
chr5 (258-320)||(20959585-20959647)
chr5 (258-320)||(25397788-25397850)
chr5 (258-295)||(19890986-19891023)
chr5 (258-320)||(23423756-23423818)
chr5 (258-303)||(16464723-16464768)
chr5 (257-313)||(27428011-27428067)
[»] chr1 (57 HSPs)
chr1 (258-320)||(6412053-6412115)
chr1 (258-318)||(51973503-51973563)
chr1 (257-320)||(9109974-9110037)
chr1 (258-320)||(9177177-9177239)
chr1 (258-320)||(28229455-28229517)
chr1 (258-320)||(46790077-46790139)
chr1 (255-320)||(12720886-12720951)
chr1 (257-320)||(8940993-8941056)
chr1 (257-320)||(20408159-20408222)
chr1 (257-320)||(50092297-50092360)
chr1 (258-320)||(6459294-6459356)
chr1 (258-320)||(45839369-45839431)
chr1 (258-320)||(46339445-46339507)
chr1 (258-320)||(4340484-4340546)
chr1 (258-320)||(17200010-17200072)
chr1 (258-320)||(22603625-22603687)
chr1 (258-320)||(41120737-41120799)
chr1 (255-320)||(12161891-12161956)
chr1 (255-320)||(29549495-29549560)
chr1 (256-320)||(18890547-18890611)
chr1 (264-320)||(46785964-46786020)
chr1 (257-320)||(9985326-9985389)
chr1 (257-320)||(22158879-22158942)
chr1 (258-320)||(7181555-7181617)
chr1 (258-320)||(15243162-15243224)
chr1 (258-320)||(19865321-19865383)
chr1 (258-320)||(23457974-23458036)
chr1 (258-320)||(52183755-52183817)
chr1 (258-314)||(12369951-12370008)
chr1 (259-320)||(25787998-25788059)
chr1 (257-320)||(17661127-17661190)
chr1 (257-320)||(48522595-48522658)
chr1 (258-320)||(20290321-20290382)
chr1 (258-320)||(38531170-38531232)
chr1 (258-320)||(50845330-50845392)
chr1 (265-320)||(9464180-9464235)
chr1 (258-313)||(41752517-41752572)
chr1 (258-320)||(14760944-14761006)
chr1 (262-320)||(16913581-16913639)
chr1 (258-320)||(18894900-18894962)
chr1 (258-320)||(46865320-46865382)
chr1 (255-320)||(12989929-12989994)
chr1 (256-320)||(13308818-13308882)
chr1 (258-320)||(19081805-19081867)
chr1 (258-320)||(19129693-19129755)
chr1 (258-320)||(27253855-27253917)
chr1 (259-320)||(9259184-9259245)
chr1 (275-320)||(41071852-41071897)
chr1 (256-320)||(13102393-13102457)
chr1 (268-312)||(30928388-30928432)
chr1 (258-320)||(41063274-41063336)
chr1 (258-319)||(13195661-13195722)
chr1 (257-306)||(13294944-13294993)
chr1 (257-306)||(39749024-39749073)
chr1 (254-306)||(12806832-12806884)
chr1 (258-306)||(20581001-20581049)
chr1 (288-320)||(32046953-32046985)
[»] chr7 (47 HSPs)
chr7 (255-320)||(18217906-18217971)
chr7 (256-320)||(3872185-3872249)
chr7 (256-320)||(22486471-22486535)
chr7 (257-320)||(23539309-23539372)
chr7 (256-320)||(6849209-6849273)
chr7 (256-320)||(23232116-23232180)
chr7 (258-317)||(3904478-3904537)
chr7 (257-320)||(7733311-7733374)
chr7 (257-320)||(21917333-21917396)
chr7 (257-320)||(27806095-27806158)
chr7 (257-320)||(31425510-31425573)
chr7 (258-320)||(1842971-1843033)
chr7 (258-320)||(11036584-11036646)
chr7 (258-320)||(23699825-23699887)
chr7 (258-320)||(28800955-28801017)
chr7 (255-320)||(23750733-23750798)
chr7 (256-320)||(21623098-21623161)
chr7 (258-320)||(9698538-9698600)
chr7 (258-320)||(20174097-20174159)
chr7 (258-320)||(20429542-20429604)
chr7 (258-320)||(24605915-24605977)
chr7 (258-320)||(47523650-47523712)
chr7 (257-318)||(2093361-2093422)
chr7 (256-320)||(1907432-1907496)
chr7 (256-320)||(23577187-23577251)
chr7 (258-318)||(37135285-37135345)
chr7 (258-320)||(2650828-2650890)
chr7 (258-320)||(15014405-15014467)
chr7 (258-320)||(48933213-48933275)
chr7 (257-320)||(21871645-21871708)
chr7 (258-320)||(33427767-33427828)
chr7 (258-320)||(42926419-42926482)
chr7 (258-316)||(687947-688005)
chr7 (258-320)||(1824200-1824262)
chr7 (258-320)||(14786635-14786697)
chr7 (259-312)||(27132722-27132775)
chr7 (258-320)||(4514842-4514904)
chr7 (258-320)||(36993897-36993959)
chr7 (258-320)||(38057709-38057771)
chr7 (258-320)||(38090340-38090402)
chr7 (258-320)||(39979624-39979686)
chr7 (256-320)||(15969861-15969926)
chr7 (255-306)||(816188-816239)
chr7 (258-312)||(20923958-20924012)
chr7 (259-320)||(24140527-24140588)
chr7 (260-305)||(32267438-32267483)
chr7 (256-304)||(2457761-2457809)
[»] chr8 (55 HSPs)
chr8 (256-320)||(24193194-24193258)
chr8 (257-320)||(8555303-8555366)
chr8 (257-320)||(27910763-27910826)
chr8 (257-320)||(27957182-27957245)
chr8 (258-320)||(4331053-4331115)
chr8 (258-320)||(19240942-19241004)
chr8 (258-320)||(19314126-19314188)
chr8 (258-320)||(19488061-19488123)
chr8 (258-320)||(24576024-24576086)
chr8 (256-320)||(16061937-16062001)
chr8 (256-320)||(25274672-25274736)
chr8 (257-320)||(17810373-17810436)
chr8 (257-320)||(32247984-32248047)
chr8 (258-320)||(4647755-4647817)
chr8 (258-320)||(25655858-25655920)
chr8 (258-320)||(27869313-27869375)
chr8 (258-320)||(33412977-33413038)
chr8 (258-320)||(33652642-33652704)
chr8 (260-320)||(9915043-9915103)
chr8 (256-320)||(22939388-22939452)
chr8 (257-320)||(8824900-8824963)
chr8 (258-320)||(3823208-3823270)
chr8 (258-320)||(11938820-11938881)
chr8 (258-320)||(13060931-13060993)
chr8 (258-320)||(18010060-18010122)
chr8 (258-320)||(19256287-19256349)
chr8 (258-320)||(21350553-21350615)
chr8 (258-320)||(25000431-25000493)
chr8 (258-320)||(30688011-30688073)
chr8 (258-320)||(43431559-43431621)
chr8 (256-320)||(29350998-29351063)
chr8 (256-320)||(6817129-6817193)
chr8 (258-318)||(30466954-30467014)
chr8 (258-320)||(24636727-24636790)
chr8 (258-320)||(9631479-9631541)
chr8 (258-320)||(23752286-23752348)
chr8 (258-320)||(32961734-32961796)
chr8 (258-320)||(42700657-42700719)
chr8 (257-320)||(17824615-17824678)
chr8 (257-320)||(25273327-25273389)
chr8 (257-320)||(31399507-31399570)
chr8 (258-318)||(10917904-10917964)
chr8 (265-317)||(14304307-14304359)
chr8 (258-318)||(21219240-21219300)
chr8 (257-320)||(5670168-5670231)
chr8 (257-312)||(29345154-29345209)
chr8 (258-312)||(15251684-15251738)
chr8 (258-320)||(40289421-40289483)
chr8 (258-320)||(6816383-6816445)
chr8 (258-320)||(17103865-17103927)
chr8 (257-320)||(8789915-8789978)
chr8 (258-312)||(6084246-6084300)
chr8 (258-295)||(17003362-17003399)
chr8 (252-305)||(24479807-24479860)
chr8 (260-304)||(37992190-37992234)
[»] chr6 (62 HSPs)
chr6 (256-320)||(6598541-6598605)
chr6 (257-320)||(6605495-6605558)
chr6 (257-320)||(9893040-9893103)
chr6 (257-320)||(26224505-26224568)
chr6 (258-320)||(15448462-15448524)
chr6 (258-320)||(24661009-24661071)
chr6 (258-320)||(28364988-28365050)
chr6 (255-320)||(495624-495689)
chr6 (258-319)||(30833960-30834021)
chr6 (257-320)||(16250801-16250864)
chr6 (257-320)||(20182222-20182285)
chr6 (257-320)||(22153706-22153769)
chr6 (258-320)||(1939242-1939304)
chr6 (258-320)||(15364458-15364520)
chr6 (258-320)||(22579349-22579411)
chr6 (259-320)||(5360486-5360547)
chr6 (261-320)||(25398079-25398138)
chr6 (258-320)||(2669386-2669448)
chr6 (258-320)||(6978354-6978416)
chr6 (258-320)||(11049751-11049813)
chr6 (258-320)||(12160847-12160909)
chr6 (258-320)||(12200771-12200833)
chr6 (258-320)||(15509233-15509295)
chr6 (258-316)||(15961407-15961465)
chr6 (258-318)||(5250218-5250278)
chr6 (261-317)||(21141019-21141075)
chr6 (258-320)||(21990175-21990236)
chr6 (258-320)||(28668177-28668239)
chr6 (258-320)||(33250708-33250770)
chr6 (259-320)||(10458841-10458902)
chr6 (264-320)||(5192195-5192251)
chr6 (257-320)||(12499293-12499357)
chr6 (257-320)||(12506622-12506686)
chr6 (257-320)||(12509544-12509608)
chr6 (257-320)||(2992692-2992755)
chr6 (259-318)||(27796835-27796894)
chr6 (258-320)||(18492446-18492508)
chr6 (256-320)||(12351584-12351648)
chr6 (257-312)||(9885328-9885383)
chr6 (255-318)||(13251376-13251439)
chr6 (139-250)||(15050125-15050235)
chr6 (258-320)||(22083915-22083977)
chr6 (258-320)||(26939664-26939726)
chr6 (257-314)||(17919619-17919676)
chr6 (256-320)||(14886638-14886702)
chr6 (261-320)||(11077726-11077785)
chr6 (257-320)||(18048865-18048928)
chr6 (258-312)||(8844168-8844222)
chr6 (262-312)||(12157380-12157430)
chr6 (258-320)||(12951785-12951847)
chr6 (258-295)||(33191182-33191219)
chr6 (265-320)||(9060167-9060222)
chr6 (261-320)||(14872196-14872255)
chr6 (257-320)||(18033525-18033587)
chr6 (262-320)||(1954957-1955015)
chr6 (258-320)||(14772738-14772800)
chr6 (264-314)||(20692817-20692867)
chr6 (258-295)||(14036714-14036751)
chr6 (258-318)||(11530304-11530364)
chr6 (276-320)||(12845080-12845124)
chr6 (268-320)||(22055622-22055674)
chr6 (288-320)||(27705499-27705531)
[»] chr3 (76 HSPs)
chr3 (256-320)||(48404933-48404997)
chr3 (257-320)||(27449161-27449224)
chr3 (258-320)||(43329763-43329825)
chr3 (255-320)||(5261010-5261075)
chr3 (256-320)||(19223522-19223586)
chr3 (257-320)||(26098886-26098949)
chr3 (258-320)||(8110412-8110474)
chr3 (258-320)||(9652651-9652713)
chr3 (258-320)||(13921398-13921460)
chr3 (258-320)||(18091547-18091609)
chr3 (258-320)||(19269864-19269926)
chr3 (258-320)||(21816794-21816856)
chr3 (258-320)||(25882643-25882705)
chr3 (258-320)||(26390634-26390696)
chr3 (254-320)||(29236117-29236183)
chr3 (257-320)||(8428244-8428307)
chr3 (259-318)||(11915833-11915892)
chr3 (257-320)||(29956445-29956508)
chr3 (257-320)||(30005600-30005663)
chr3 (258-320)||(8546318-8546380)
chr3 (258-320)||(10941665-10941727)
chr3 (258-320)||(11219211-11219273)
chr3 (258-320)||(13905038-13905100)
chr3 (258-320)||(17762715-17762777)
chr3 (258-320)||(18104530-18104592)
chr3 (258-320)||(19064035-19064097)
chr3 (267-320)||(29704041-29704094)
chr3 (256-320)||(7623529-7623593)
chr3 (258-318)||(11085342-11085402)
chr3 (257-320)||(3461309-3461372)
chr3 (257-320)||(11007682-11007745)
chr3 (257-320)||(18380097-18380160)
chr3 (258-320)||(1310959-1311021)
chr3 (258-320)||(1745488-1745549)
chr3 (258-320)||(11837214-11837276)
chr3 (254-320)||(23773550-23773616)
chr3 (257-318)||(6088227-6088288)
chr3 (265-318)||(18539879-18539932)
chr3 (265-320)||(4393357-4393412)
chr3 (256-312)||(21020146-21020202)
chr3 (258-317)||(6447246-6447305)
chr3 (258-320)||(10803793-10803856)
chr3 (257-320)||(19610411-19610474)
chr3 (257-320)||(47263264-47263327)
chr3 (258-312)||(5565803-5565857)
chr3 (258-320)||(15063992-15064054)
chr3 (258-320)||(17269604-17269666)
chr3 (258-312)||(20761950-20762004)
chr3 (258-320)||(21490034-21490096)
chr3 (274-320)||(28859664-28859710)
chr3 (257-318)||(29451169-29451231)
chr3 (254-320)||(37283596-37283662)
chr3 (258-318)||(30219413-30219473)
chr3 (257-316)||(31250165-31250224)
chr3 (258-316)||(8543546-8543603)
chr3 (258-320)||(16299934-16299996)
chr3 (258-320)||(23217208-23217270)
chr3 (263-313)||(26963254-26963304)
chr3 (254-320)||(29216065-29216131)
chr3 (258-312)||(46012728-46012782)
chr3 (258-320)||(46942560-46942622)
chr3 (261-318)||(1628290-1628347)
chr3 (260-301)||(11386427-11386468)
chr3 (259-312)||(27968996-27969049)
chr3 (258-306)||(10772053-10772101)
chr3 (257-312)||(36543830-36543885)
chr3 (257-312)||(36564438-36564493)
chr3 (258-320)||(5744489-5744551)
chr3 (258-320)||(5781448-5781510)
chr3 (257-314)||(15501550-15501608)
chr3 (258-312)||(21088831-21088885)
chr3 (258-320)||(50665636-50665698)
chr3 (288-320)||(6718783-6718815)
chr3 (288-320)||(19545583-19545615)
chr3 (258-294)||(20088504-20088540)
chr3 (257-320)||(26830440-26830504)
[»] chr4 (49 HSPs)
chr4 (257-320)||(7111945-7112008)
chr4 (258-320)||(4586758-4586820)
chr4 (256-320)||(19839254-19839318)
chr4 (258-318)||(22168345-22168405)
chr4 (257-320)||(9238624-9238687)
chr4 (257-320)||(9670478-9670541)
chr4 (257-320)||(38645825-38645888)
chr4 (258-320)||(44783558-44783620)
chr4 (259-320)||(4627079-4627140)
chr4 (258-319)||(5473925-5473986)
chr4 (256-317)||(45091339-45091400)
chr4 (255-320)||(54539361-54539426)
chr4 (258-318)||(38619924-38619984)
chr4 (258-317)||(30268988-30269047)
chr4 (258-317)||(30283142-30283201)
chr4 (258-320)||(55309212-55309275)
chr4 (258-320)||(13564915-13564977)
chr4 (258-320)||(27040025-27040087)
chr4 (258-320)||(32175737-32175799)
chr4 (258-320)||(45532579-45532641)
chr4 (252-320)||(42055472-42055540)
chr4 (258-320)||(2275677-2275740)
chr4 (257-320)||(29625400-29625463)
chr4 (258-320)||(13028816-13028878)
chr4 (258-320)||(18714977-18715039)
chr4 (258-320)||(19680424-19680486)
chr4 (258-320)||(46286229-46286291)
chr4 (263-320)||(37378628-37378685)
chr4 (265-320)||(18051914-18051969)
chr4 (265-320)||(30568006-30568061)
chr4 (258-320)||(25026632-25026694)
chr4 (259-320)||(24682328-24682389)
chr4 (251-320)||(30508062-30508131)
chr4 (258-314)||(30420033-30420089)
chr4 (257-320)||(9239280-9239343)
chr4 (258-320)||(1638522-1638584)
chr4 (256-318)||(33914136-33914198)
chr4 (257-318)||(36689754-36689815)
chr4 (256-312)||(8878966-8879022)
chr4 (258-314)||(12072043-12072099)
chr4 (258-320)||(9913333-9913395)
chr4 (258-312)||(22128312-22128366)
chr4 (257-318)||(12106059-12106120)
chr4 (256-320)||(9058950-9059014)
chr4 (257-320)||(5399684-5399747)
chr4 (258-312)||(4606829-4606883)
chr4 (258-312)||(16915452-16915506)
chr4 (262-316)||(38223589-38223643)
chr4 (268-320)||(25147796-25147848)
[»] chr2 (45 HSPs)
chr2 (257-320)||(41736245-41736308)
chr2 (258-320)||(12779673-12779735)
chr2 (258-320)||(20065074-20065136)
chr2 (258-320)||(28841342-28841404)
chr2 (258-320)||(37552300-37552362)
chr2 (257-320)||(15636734-15636797)
chr2 (257-320)||(22140363-22140426)
chr2 (257-320)||(27039907-27039970)
chr2 (257-320)||(44476374-44476437)
chr2 (258-320)||(7093641-7093703)
chr2 (258-320)||(13788055-13788117)
chr2 (258-320)||(43408511-43408573)
chr2 (259-320)||(28319580-28319641)
chr2 (265-320)||(1141609-1141664)
chr2 (257-320)||(18551252-18551315)
chr2 (257-320)||(21293710-21293773)
chr2 (258-317)||(32185908-32185967)
chr2 (265-320)||(32300524-32300579)
chr2 (258-320)||(32009025-32009088)
chr2 (257-320)||(37723991-37724054)
chr2 (258-320)||(8430369-8430431)
chr2 (258-320)||(14757121-14757183)
chr2 (258-320)||(23857958-23858019)
chr2 (258-316)||(44723009-44723067)
chr2 (259-320)||(23388379-23388440)
chr2 (263-320)||(38362276-38362333)
chr2 (261-320)||(28262437-28262496)
chr2 (257-320)||(41637691-41637754)
chr2 (258-320)||(13613093-13613155)
chr2 (258-320)||(26243321-26243383)
chr2 (256-312)||(16098915-16098971)
chr2 (258-320)||(29749403-29749465)
chr2 (264-319)||(12860235-12860290)
chr2 (257-312)||(22192260-22192315)
chr2 (257-320)||(30783411-30783474)
chr2 (258-320)||(27327689-27327751)
chr2 (258-320)||(36550909-36550970)
chr2 (256-313)||(40018882-40018939)
chr2 (256-306)||(26687688-26687738)
chr2 (258-320)||(31266427-31266489)
chr2 (257-318)||(9004307-9004368)
chr2 (275-312)||(9590551-9590588)
chr2 (275-312)||(35697536-35697573)
chr2 (255-312)||(37802376-37802433)
chr2 (268-320)||(44366007-44366059)
[»] scaffold0014 (1 HSPs)
scaffold0014 (256-320)||(22288-22352)
[»] scaffold0603 (1 HSPs)
scaffold0603 (258-320)||(5979-6041)
[»] scaffold0576 (1 HSPs)
scaffold0576 (258-320)||(9229-9291)
[»] scaffold0219 (1 HSPs)
scaffold0219 (258-320)||(19680-19742)
[»] scaffold0128 (1 HSPs)
scaffold0128 (258-320)||(10663-10725)
[»] scaffold0011 (1 HSPs)
scaffold0011 (258-320)||(17617-17679)
[»] scaffold0009 (3 HSPs)
scaffold0009 (258-320)||(219713-219775)
scaffold0009 (259-320)||(182607-182668)
scaffold0009 (258-320)||(215663-215725)
[»] scaffold0007 (3 HSPs)
scaffold0007 (258-320)||(3819-3881)
scaffold0007 (257-320)||(202851-202914)
scaffold0007 (258-320)||(274665-274727)
[»] scaffold0001 (3 HSPs)
scaffold0001 (258-320)||(84380-84442)
scaffold0001 (258-316)||(8110-8168)
scaffold0001 (258-316)||(21842-21900)
[»] scaffold0240 (1 HSPs)
scaffold0240 (258-318)||(14990-15050)
[»] scaffold0108 (1 HSPs)
scaffold0108 (258-318)||(12731-12791)
[»] scaffold0599 (1 HSPs)
scaffold0599 (259-318)||(7584-7643)
[»] scaffold0023 (1 HSPs)
scaffold0023 (258-317)||(39703-39762)
[»] scaffold0076 (1 HSPs)
scaffold0076 (258-320)||(26560-26622)
[»] scaffold0062 (1 HSPs)
scaffold0062 (258-320)||(43994-44056)
[»] scaffold0554 (1 HSPs)
scaffold0554 (258-320)||(9887-9949)
[»] scaffold0006 (2 HSPs)
scaffold0006 (262-320)||(84678-84736)
scaffold0006 (258-320)||(120987-121049)
[»] scaffold0161 (1 HSPs)
scaffold0161 (261-314)||(6878-6931)
[»] scaffold0087 (1 HSPs)
scaffold0087 (257-320)||(37786-37849)
[»] scaffold0035 (1 HSPs)
scaffold0035 (261-320)||(74720-74779)
[»] scaffold0002 (1 HSPs)
scaffold0002 (258-320)||(440040-440102)
[»] scaffold0717 (1 HSPs)
scaffold0717 (258-318)||(918-979)
[»] scaffold0019 (1 HSPs)
scaffold0019 (257-318)||(173525-173585)
[»] scaffold0184 (1 HSPs)
scaffold0184 (261-320)||(7533-7592)
[»] scaffold0047 (1 HSPs)
scaffold0047 (256-318)||(58661-58723)
[»] scaffold0655 (1 HSPs)
scaffold0655 (258-320)||(3162-3224)
[»] scaffold0069 (1 HSPs)
scaffold0069 (258-320)||(10235-10297)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-53)||(92344-92392)


Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 257
Target Start/End: Complemental strand, 24013541 - 24013290
Alignment:
Q  6 acaaagacctctctcttaaaggaaactaattaacttacttggccaccatggttagatagtaacttttttaaacgaggaaagaaaaattattactaataac 105  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24013541 acaaagaattctctcttaaaggcaactaattaacttacttggccaccatggttagatagtaacttttttaaacgaggaaagaaaaattattactaataac 24013442  T
Q  106 agtgagattaatgaatattttacaatagtttatatgtttgctgcaatttcccccacctcttcgaccacatacgccattattagattgccgattatttgaa 205  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |    
T  24013441 agtgagattaatgattattttacaatagtttatatgtttgctgcaatttcctccacctcttcgaccacatacgccattattagattgccgattacttgga 24013342  T
Q  206 gcaaagcatgactttcgaatttctccttgatttccaatcaaaacactcaatt 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24013341 gcaaagcatgactttcgaatttctccttgatttccaatcaaaacactcaatt 24013290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 38837670 - 38837733
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38837670 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 38837733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 12045866 - 12045804
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12045866 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 12045804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 12328226 - 12328288
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12328226 cactactagaaaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattcctcaca 12328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 36196533 - 36196471
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36196533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 36196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 4125187 - 4125250
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  4125187 tcactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 4125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 8108859 - 8108922
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8108859 tcactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaca 8108922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 618433 - 618371
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  618433 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 618371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 746868 - 746930
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  746868 cactacaagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 746930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 7888936 - 7888874
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  7888936 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcaca 7888874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 16121839 - 16121901
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  16121839 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcaca 16121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 16631874 - 16631936
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  16631874 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 16631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 26708583 - 26708647
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  26708583 ttcactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcaca 26708647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 26978317 - 26978381
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  26978317 ttcactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcaca 26978381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 2472714 - 2472776
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  2472714 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcaca 2472776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 10494876 - 10494814
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  10494876 cactactagaaaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattcctcaca 10494814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 15061112 - 15061050
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  15061112 cactaccagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcaca 15061050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17039631 - 17039693
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  17039631 cactactagaaaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattcctcaca 17039693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 23975778 - 23975712
Alignment:
Q  255 attcactactagaaaaa-gcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23975778 attcactactaaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 23975712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 28265475 - 28265537
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28265475 cactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 28265537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 36716200 - 36716262
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  36716200 cactactagaaaaaacaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 36716262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 25652581 - 25652645
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  25652581 ttcactattagaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcaca 25652645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 17771969 - 17772028
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  17771969 actactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctca 17772028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 7003730 - 7003792
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  7003730 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcaca 7003792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 8886851 - 8886913
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||    
T  8886851 cactactagaaaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattcctcaca 8886913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13974078 - 13974140
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||    
T  13974078 cactactagaaaaagcaaaattagcgagggaaattagcgacgaaaaaaatgaaattcttcaca 13974140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 35620344 - 35620405
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  35620344 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaat-aaattcctcaca 35620405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 36831889 - 36831950
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||||||||||||| ||||||||||||  ||| ||||||||||||||||||    
T  36831889 tcactactagaaaaagcaaaattagtgagggaaattagggacgaaaaaaatgaaattcctca 36831950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 5982785 - 5982722
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  5982785 cactactagaaaaagcaaaatcagcgagggaaattagtgacggaaaaaaatggaattcctcaca 5982722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 20187940 - 20188003
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  20187940 tcactattagcaaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattcctcaca 20188003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 23409120 - 23409057
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||    
T  23409120 cactactagaaaaagcaaaattagcgagaaaaattagtgacggaaaaaaatgaaattcctcaca 23409057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 40484183 - 40484128
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaatt 313  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  40484183 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaataatgaaatt 40484128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 24138841 - 24138903
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||    
T  24138841 cactattagaaaaagcaaaattagcgaggaaaattggtgacggaaaaaatgaaatttctcaca 24138903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 17986868 - 17986806
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| |||||||||| |||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  17986868 cactgctagaaaaagtaaaattagtgagagaaattagtgacggaaaaaatgaaattcttcaca 17986806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 33818561 - 33818623
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||| | |||||||||| || |||||||| || ||||||||||||    
T  33818561 cactactagaaaaagcaaaattggggagggaaatttgtgacggaaaacataaaattcctcaca 33818623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 29727895 - 29727939
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaa 302  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  29727895 cactactagaaaaagtaaaattagcgagggaaattagtgacggaa 29727939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 10420252 - 10420314
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| | ||| ||||||||| ||||||||||||| ||||||||||| |||| |||||||    
T  10420252 cactactaaagaaatcaaaattagagagggaaattagtgacggaaaaaataaaatccctcaca 10420314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 13620127 - 13620181
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||| ||||| || ||||||||||||| ||||||||||| ||||    
T  13620127 cactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaat 13620181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17036412 - 17036474
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||| |||||||||| ||| || |||||| |||||| |||| ||||||||||||    
T  17036412 cactactagaaaatgcaaaattagggagcgagattagtgacggaagaaataaaattcctcaca 17036474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 20959647 - 20959585
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| |||| |||| | | ||||||||||| ||||||||||||    
T  20959647 cactactagaaaaagtaaaattagggaggaaaatcactgacggaaaaaataaaattcctcaca 20959585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 25397788 - 25397850
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || |||||| |||||    
T  25397788 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcgtcaca 25397850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 19890986 - 19891023
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagt 295  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  19890986 cactattagaaaaagcaaaattagcgagggaaattagt 19891023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 23423756 - 23423818
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| | |||||||||||| |||||||||| || ||| |||| || ||||||||||||    
T  23423756 cactactaggataagcaaaattagggagggaaatttgtgacgaaaaacataaaattcctcaca 23423818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 16464768 - 16464723
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaa 303  Q
    ||||||||| ||| |||||||||| ||||||||||||| |||||||    
T  16464768 cactactaggaaaggcaaaattagggagggaaattagtgacggaaa 16464723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 27428011 - 27428067
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaatt 313  Q
    |||||||||  ||||| |||||||| ||||||||||||| ||| ||||||| |||||    
T  27428011 tcactactaataaaagaaaaattagggagggaaattagtgacgaaaaaaataaaatt 27428067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 6412053 - 6412115
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6412053 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 6412115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 51973563 - 51973503
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51973563 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 51973503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 9109974 - 9110037
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9109974 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 9110037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 9177239 - 9177177
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9177239 cactactagaaaaaacaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 9177177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 28229455 - 28229517
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28229455 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 28229517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 46790139 - 46790077
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46790139 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 46790077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 12720951 - 12720886
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  12720951 attcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcaca 12720886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 8940993 - 8941056
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  8940993 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 8941056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 20408159 - 20408222
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20408159 tcactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 20408222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 50092297 - 50092360
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  50092297 tcactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 50092360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 6459356 - 6459294
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6459356 cactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 6459294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 45839431 - 45839369
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45839431 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 45839369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 46339445 - 46339507
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  46339445 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 46339507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 4340546 - 4340484
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  4340546 cactattagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcaca 4340484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17200010 - 17200072
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  17200010 cactactagaaaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcaca 17200072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 22603687 - 22603625
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  22603687 cactactagaaaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcaca 22603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 41120737 - 41120799
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  41120737 cactaatagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 41120799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 12161956 - 12161891
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  12161956 attcactactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcaca 12161891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 29549560 - 29549495
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||    
T  29549560 attcactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaataaaatttctcaca 29549495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 18890547 - 18890611
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18890547 ttcactatcagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 18890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 46785964 - 46786020
Alignment:
Q  264 tagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  46785964 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 46786020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 9985326 - 9985389
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  9985326 tcactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatcaaattcctcaca 9985389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 22158942 - 22158879
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||| |||||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  22158942 tcactaccagaaaaagtaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcaca 22158879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 7181555 - 7181617
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||    
T  7181555 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaagaaaattcctcaca 7181617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 15243224 - 15243162
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  15243224 cactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcaca 15243162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19865383 - 19865321
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  19865383 cactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaatttctcaca 19865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 23458036 - 23457974
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  23458036 cactactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcaca 23457974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 52183817 - 52183755
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  52183817 cactactagaaaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattcctcaca 52183755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 12369951 - 12370008
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattc 314  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  12369951 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattc 12370008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 25787998 - 25788059
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||    
T  25787998 actactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattcctcaca 25788059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 17661190 - 17661127
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||    
T  17661190 tcactattagaaaaagcaaaattaacgacggaaattagtgacggaaaaaataaaattcctcaca 17661127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 48522658 - 48522595
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||    
T  48522658 tcactactagaaaaagcaaaattagcgaggaaaattagtgacagaaaaaataaaatttctcaca 48522595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 20290321 - 20290382
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  20290321 cactgctagaaaaagtaaaattagcgagggaaattagtgacgg-aaaaatgaaattcctcaca 20290382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 38531170 - 38531232
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| ||||||||| ||| ||||||||||| ||||||||||||    
T  38531170 cactactagaaaaagtaaaattagggagggaaataagtgacggaaaaaataaaattcctcaca 38531232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 50845330 - 50845392
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  50845330 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 50845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 9464235 - 9464180
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| |||||||| || |||||||||| ||||||||||||||||||||||||    
T  9464235 agaaaaagtaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcaca 9464180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 41752572 - 41752517
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaatt 313  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||| |||||    
T  41752572 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaatt 41752517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 14761006 - 14760944
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||||||||    
T  14761006 cactactagaaaaagcaaaattaaagagggaaatttgtgacggaaaacataaaattcctcaca 14760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 16913581 - 16913639
Alignment:
Q  262 actagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||||| ||||||||||||    
T  16913581 actaggaaaagcaaaattaggaagggaaattagtgacggaaaaaataaaattcctcaca 16913639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 18894900 - 18894962
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| ||||||||||||||||||| |||||||| ||| ||||||| |||| |||||||    
T  18894900 cactactaggaaaagcaaaattagcgaggaaaattagtgacgaaaaaaataaaatacctcaca 18894962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 46865382 - 46865320
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||| ||| ||||||||||||| ||||||||||| |||| |||||||    
T  46865382 cactactagaaaaagaaaaactagggagggaaattagtgacggaaaaaataaaatccctcaca 46865320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 12989994 - 12989929
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||| ||||||||||||||| ||| |||||| || ||||||||||| ||||| ||||||    
T  12989994 attcactactaaaaaaagcaaaattagagagagaaattggtgacggaaaaaataaaatttctcaca 12989929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 13308818 - 13308882
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||| |||| ||||||||| |||||||||||||  | |||||||| ||||||||||||    
T  13308818 ttcactactaggaaaaacaaaattagagagggaaattagtgtccgaaaaaataaaattcctcaca 13308882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19081867 - 19081805
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| |||||| |||||||| ||||||||||||| | ||||||||| ||||| ||||||    
T  19081867 cactactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcaca 19081805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19129755 - 19129693
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| |||||| |||||||| ||||||||||||| | ||||||||| ||||| ||||||    
T  19129755 cactactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcaca 19129693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 27253855 - 27253917
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| |||| |||||| | ||||||||||| ||||| ||||||    
T  27253855 cactactagaaaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatttctcaca 27253917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 9259184 - 9259245
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||| |||||||| ||||| |||||||| ||||||||||  ||||| ||||||    
T  9259184 actactagaaaaaacaaaattaacgaggaaaattagtgacggaaaaaagaaaatttctcaca 9259245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 41071852 - 41071897
Alignment:
Q  275 aaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  41071852 aaatttgcgagggaaattagtgacggagaaaatgaaattcctcaca 41071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 13102457 - 13102393
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||| |||||||||||||  |||||||||| || |||||||| || |||||| |||||    
T  13102457 ttcactactaggaaaagcaaaattaaggagggaaatttgtgacggaaaacataaaattcatcaca 13102393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 30928388 - 30928432
Alignment:
Q  268 aaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||    
T  30928388 aaaagcaaaattagagagggaaattagtgacggaaaaaataaaat 30928432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 41063336 - 41063274
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||   ||| |||||||| ||||||||||| |||| |||||||    
T  41063336 cactactagaaaaagtaaaattaagaaggaaaattagtgacggaaaaaataaaatccctcaca 41063274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 13195722 - 13195661
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcac 319  Q
    ||||||||||||| |||||||||| |||||| |||||| | ||||||  | |||||||||||    
T  13195722 cactactagaaaatgcaaaattagggagggagattagtgatggaaaagttaaaattcctcac 13195661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 13294944 - 13294993
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    |||||||||||||||| |||| ||  |||||||| |||||||||||||||    
T  13294944 tcactactagaaaaagaaaaaataaagagggaaactagtaacggaaaaaa 13294993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 39749073 - 39749024
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    |||||||||| |||||||||||||  ||| ||||||||| ||||||||||    
T  39749073 tcactactaggaaaagcaaaattaaggagcgaaattagtgacggaaaaaa 39749024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 12806832 - 12806884
Alignment:
Q  254 aattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    ||||||||| ||| |||||||| ||||| ||||||||||||| || |||||||    
T  12806832 aattcactattaggaaaagcaatattagggagggaaattagtgacagaaaaaa 12806884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 20581049 - 20581001
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    |||||||| |||||| |||||||| ||||||||||||| | ||||||||    
T  20581049 cactactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaa 20581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 32046985 - 32046953
Alignment:
Q  288 aaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||    
T  32046985 aaattagtgacggaaaaaatgaaattcctcaca 32046953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 18217971 - 18217906
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18217971 attcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 18217906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 3872185 - 3872249
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3872185 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 3872249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 22486535 - 22486471
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22486535 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 22486471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 23539372 - 23539309
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23539372 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 23539309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 6849209 - 6849273
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  6849209 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattcctcaca 6849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 23232180 - 23232116
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23232180 ttcactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaca 23232116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 3904478 - 3904537
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3904478 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctc 3904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 7733311 - 7733374
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7733311 tcactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 7733374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 21917333 - 21917396
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  21917333 tcactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 21917396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 27806158 - 27806095
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27806158 tcactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 27806095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 31425510 - 31425573
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31425510 tcactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 31425573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 1843033 - 1842971
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  1843033 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 1842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 11036646 - 11036584
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11036646 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcaca 11036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 23699825 - 23699887
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  23699825 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 23699887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 28801017 - 28800955
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  28801017 cactactagaaaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcaca 28800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 23750733 - 23750798
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23750733 attcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 23750798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 21623161 - 21623098
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21623161 ttcactactagaaaaagcaaaat-agcgagggaaattagtgacggaaaaaatgaaattcctcaca 21623098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 9698538 - 9698600
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  9698538 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcaca 9698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 20174159 - 20174097
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20174159 cactaccaggaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 20174097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 20429604 - 20429542
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  20429604 cactactagaaaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattcctcaca 20429542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 24605977 - 24605915
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  24605977 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaca 24605915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 47523650 - 47523712
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  47523650 cactactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 47523712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 2093361 - 2093422
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  2093361 tcactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctca 2093422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 1907496 - 1907432
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  1907496 ttcactactaggaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaatccctcaca 1907432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 23577187 - 23577251
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  23577187 ttcactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcaca 23577251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 37135285 - 37135345
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37135285 cactactagaaaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattcctca 37135345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 2650828 - 2650890
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  2650828 cactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcaca 2650890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 15014405 - 15014467
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  15014405 cactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattcctcaca 15014467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 48933275 - 48933213
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  48933275 cactattagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattcctcaca 48933213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 21871708 - 21871645
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  21871708 tcactactagaaaaaacaaaattagcgaggaaaatcagtggcggaaaaaatgaaattcctcaca 21871645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 33427828 - 33427767
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  33427828 cactactagaaaaaacaaaattagcgagggaaattagtgac-caaaaaatgaaattcctcaca 33427767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 42926419 - 42926482
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    ||||||||||||||  ||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  42926419 cactactagaaaaaataaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcaca 42926482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 688005 - 687947
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    |||||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||    
T  688005 cactactagaaaaagcaaaattagcgagggaaatcaatgacgaaaaaaataaaattcct 687947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 1824200 - 1824262
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  1824200 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 1824262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 14786635 - 14786697
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||| ||||||||| |||| |||||||| || |||||||||||||||||||||    
T  14786635 cactattagaaaaaacaaaattagtgaggaaaattagtgacagaaaaaatgaaattcctcaca 14786697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 27132722 - 27132775
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||| |||||||| |||||||||| |||||||||||||| ||||    
T  27132722 actactagaaaaagtaaaattagagagggaaattggtaacggaaaaaataaaat 27132775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 4514904 - 4514842
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||| ||||||    
T  4514904 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcaca 4514842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 36993959 - 36993897
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || | |||||| || ||||||||||||    
T  36993959 cactactaggaaaagcaaaattagggagggaaatttgtgatggaaaatataaaattcctcaca 36993897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 38057771 - 38057709
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| |||||||||||| | ||||| |||||||| | ||||||||| ||||||||||||    
T  38057771 cactactacaaaaagcaaaatcaacgaggaaaattagtgatggaaaaaataaaattcctcaca 38057709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 38090402 - 38090340
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| || ||||||||||| |||||||||| || ||||||||||| |||| |||||||    
T  38090402 cactactaggaatagcaaaattagggagggaaatttgtgacggaaaaaataaaatccctcaca 38090340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 39979624 - 39979686
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  39979624 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 39979686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 15969926 - 15969861
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| |||||||  |||||| |||||| |||| ||||||||||||| ||||||    
T  15969926 ttcactactagaaaaagtaaaattaatgagggatattagtgacggaaaaaaatgaaatttctcaca 15969861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 816188 - 816239
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    |||||||||| |||||| |||| |||| ||||||||||||| ||||||||||    
T  816188 attcactactggaaaaaacaaatttagggagggaaattagtgacggaaaaaa 816239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 20923958 - 20924012
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||| |||||||  ||||||||||||| | ||||||||| ||||    
T  20923958 cactactagaaaaagtaaaattatggagggaaattagtgatggaaaaaataaaat 20924012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 24140588 - 24140527
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||| |||||||| |||| ||||| || |||||||| || ||||||||||||    
T  24140588 actactaggaaaagtaaaattagggaggaaaatttgtgacggaaaatataaaattcctcaca 24140527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 32267483 - 32267438
Alignment:
Q  260 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaaa 305  Q
    ||||||||||| |||||||||| |||||| |||||| |||||||||    
T  32267483 ctactagaaaatgcaaaattagggagggagattagtgacggaaaaa 32267438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 2457809 - 2457761
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaa 304  Q
    ||||| ||||| |||||||||||||| ||||||||||||| || |||||    
T  2457809 ttcaccactaggaaaagcaaaattagggagggaaattagtgacagaaaa 2457761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 24193194 - 24193258
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24193194 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 24193258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 8555303 - 8555366
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8555303 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 8555366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 27910763 - 27910826
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27910763 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 27910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 27957182 - 27957245
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27957182 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 27957245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 4331115 - 4331053
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4331115 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 4331053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19241004 - 19240942
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19241004 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 19240942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19314188 - 19314126
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19314188 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 19314126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 19488061 - 19488123
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19488061 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 19488123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 24576024 - 24576086
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24576024 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 24576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 16061937 - 16062001
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  16061937 ttcactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 16062001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 25274736 - 25274672
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25274736 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 25274672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 17810436 - 17810373
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  17810436 tcactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 17810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 32248047 - 32247984
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  32248047 tcactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 32247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 4647755 - 4647817
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4647755 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 4647817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 25655858 - 25655920
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25655858 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 25655920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 27869375 - 27869313
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  27869375 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 27869313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 33412977 - 33413038
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33412977 cactactagaaaaag-aaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 33413038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 33652704 - 33652642
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33652704 cactaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 33652642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 9915043 - 9915103
Alignment:
Q  260 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9915043 ctactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcaca 9915103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 22939452 - 22939388
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  22939452 ttcactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcaca 22939388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 8824963 - 8824900
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  8824963 tcactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatcaaattcctcaca 8824900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 3823270 - 3823208
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  3823270 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 3823208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 11938881 - 11938820
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  11938881 cactactagaaaaagcaaaattagcgagggaaattagtgacgg-aaaaatgaaattcctcaca 11938820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13060931 - 13060993
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  13060931 cactactagcaaaagcaaaattagcgaggtaaattagtgacggaaaaaatgaaattcctcaca 13060993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 18010060 - 18010122
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18010060 cactaccagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcaca 18010122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19256349 - 19256287
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  19256349 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcaca 19256287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 21350615 - 21350553
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  21350615 cactactagaaaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattcctcaca 21350553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 25000431 - 25000493
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25000431 cactactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 25000493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 30688073 - 30688011
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  30688073 cactactagaaaaagcaaaattagcgagggaaatcagtgaccgaaaaaatgaaattcctcaca 30688011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 43431559 - 43431621
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  43431559 cactactagaaaaagaaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 43431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 29351063 - 29350998
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaac-ggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  29351063 ttcactactagaaaaagcaaaattagcgagggaaattagtgactagaaaaaatgaaattcctcaca 29350998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 6817193 - 6817129
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||||||    
T  6817193 ttcactactagaaaaagcaaaattagcaaggaaaatcagtgacggaaaaaatgaaattcctcaca 6817129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 30466954 - 30467014
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  30466954 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaattaaaattcctca 30467014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 24636790 - 24636727
Alignment:
Q  258 cactactagaaaa-agcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  24636790 cactactagaaaatagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 24636727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 9631541 - 9631479
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||    
T  9631541 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaataaaattcctcaca 9631479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 23752286 - 23752348
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  23752286 cactattagaaaaagcaaaattagcgagggatattagtgacggaaaaaatgaaatttctcaca 23752348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 32961796 - 32961734
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  32961796 cactactaaaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcaca 32961734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 42700657 - 42700719
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  42700657 cactactagaaaaagtaaaattagcgaggaaaatcagtgacggaaaaaatgaaattcctcaca 42700719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 17824615 - 17824678
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  17824615 tcactactagaaaaagcaaaattagagagggaaatttgtgacggaaaacataaaattcctcaca 17824678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 25273327 - 25273389
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||| ||||||||    
T  25273327 tcactactagaaaaagcaaaattaacgagggaaattagtgac-gaaaaaatgaaagtcctcaca 25273389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 31399507 - 31399570
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| |||||||||||||| | | ||||||||||||||||||||    
T  31399507 tcactactagaaaaaacaaaattaacgagggaaattagtgatgaaaaaaatgaaattcctcaca 31399570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 10917964 - 10917904
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||||||    
T  10917964 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctca 10917904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 14304359 - 14304307
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| ||||    
T  14304359 agaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaatccctc 14304307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 21219240 - 21219300
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||| ||||    
T  21219240 cactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattactca 21219300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 5670168 - 5670231
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||| |||||| | |||||||||||||| |||||||||||| |||||||||||    
T  5670168 tcactgctagaaaaaacaaaatcaacgagggaaattagtgacggaaaaaatggaattcctcaca 5670231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 29345209 - 29345154
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||    
T  29345209 tcactactagaaaaagaaaaattagggagggaaattagtgacggaaaaaataaaat 29345154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 15251738 - 15251684
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  15251738 cactacttgaaaaagcaaaattagggagggaaattagtgacggaaaaaataaaat 15251684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 40289421 - 40289483
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||||||||||| || ||||||    
T  40289421 cactactagaaaaattaaaattagcgaggaaaattagtgacggaaaaaatgaattttctcaca 40289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 6816383 - 6816445
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| ||||||| |||||||||||||||||||| | | ||||||| ||||| ||||||    
T  6816383 cactactaggaaaagcataattagcgagggaaattagtgatgaaaaaaataaaatttctcaca 6816445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17103865 - 17103927
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||| ||| |||||| || |||||||| || ||||||||||||    
T  17103865 cactactagaaaaaacaaaattagagagagaaatttgtgacggaaaacataaaattcctcaca 17103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 8789978 - 8789915
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| |||||||||||||| |||| ||||| || || ||||| || ||||||||||||    
T  8789978 tcactactaggaaaagcaaaattagggaggaaaatttgtgactgaaaacataaaattcctcaca 8789915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 6084246 - 6084300
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||| |||||||||||||||||| |||  |||||||| ||||||||||| ||||    
T  6084246 cactaatagaaaaagcaaaattagggagataaattagtgacggaaaaaataaaat 6084300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 17003399 - 17003362
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagt 295  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  17003399 cactactagaaaaagcaaaattagggaggaaaattagt 17003362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 24479807 - 24479860
Alignment:
Q  252 tcaattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaa 305  Q
    ||||| |||||||| |||||||| |||||| ||||||||||||| || ||||||    
T  24479807 tcaatacactactaaaaaaagcataattagagagggaaattagtgacagaaaaa 24479860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 37992234 - 37992190
Alignment:
Q  260 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaa 304  Q
    ||||||| |||||||||||||| |||| |||||||| ||||||||    
T  37992234 ctactaggaaaagcaaaattagggaggaaaattagtgacggaaaa 37992190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 6598605 - 6598541
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6598605 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 6598541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 6605495 - 6605558
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6605495 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 6605558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 9893103 - 9893040
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9893103 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 9893040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 26224568 - 26224505
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26224568 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 26224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 15448524 - 15448462
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15448524 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 15448462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 24661009 - 24661071
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24661009 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 24661071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 28365050 - 28364988
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28365050 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 28364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 495624 - 495689
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  495624 attcactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcaca 495689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 30833960 - 30834021
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcac 319  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30833960 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcac 30834021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 16250801 - 16250864
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16250801 tcactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 16250864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 20182285 - 20182222
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20182285 tcactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 20182222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 22153706 - 22153769
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  22153706 tcactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 22153769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 1939242 - 1939304
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  1939242 cactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcaca 1939304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 15364458 - 15364520
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  15364458 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 15364520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 22579349 - 22579411
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22579349 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 22579411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 5360547 - 5360486
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  5360547 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcaca 5360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 25398138 - 25398079
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  25398138 tactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 25398079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 2669448 - 2669386
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  2669448 cactactagaaaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattcctcaca 2669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 6978416 - 6978354
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6978416 cactattaggaaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattcctcaca 6978354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 11049751 - 11049813
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11049751 cactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcaca 11049813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 12160847 - 12160909
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12160847 cactactagaaaaagtaaaattagcgagggaaattagtgacgtaaaaaatgaaattcctcaca 12160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 12200833 - 12200771
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12200833 cactgctagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 12200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 15509295 - 15509233
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  15509295 cactaccagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 15509233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 15961407 - 15961465
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  15961407 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcct 15961465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 5250278 - 5250218
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  5250278 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctca 5250218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 21141075 - 21141019
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21141075 tactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctc 21141019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 21990175 - 21990236
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  21990175 cactactagaaaaagcaaaattagcgagggaaattaatgacgg-aaaaatgaaattcctcaca 21990236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 28668239 - 28668177
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  28668239 cactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattcctcaca 28668177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 33250708 - 33250770
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  33250708 cactactagaaaagacaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 33250770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 10458902 - 10458841
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||    
T  10458902 actactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaatttcctcaca 10458841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 5192195 - 5192251
Alignment:
Q  264 tagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  5192195 tagaaaaagcaaaattagcgaggaaaattagtgaaggaaaaaatgaaattcctcaca 5192251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 12499357 - 12499293
Alignment:
Q  257 tcactactagaaaaag-caaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12499357 tcactactagaaaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcaca 12499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 12506686 - 12506622
Alignment:
Q  257 tcactactagaaaaag-caaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12506686 tcactactagaaaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcaca 12506622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 12509544 - 12509608
Alignment:
Q  257 tcactactagaaaaag-caaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12509544 tcactactagaaaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcaca 12509608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 2992755 - 2992692
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| ||||||| |||||||||||||||||||| | ||||||||| ||||||||||||    
T  2992755 tcactactaggaaaagcataattagcgagggaaattagtgatggaaaaaataaaattcctcaca 2992692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 27796835 - 27796894
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||    
T  27796835 actactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgatatttctca 27796894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 18492508 - 18492446
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| |||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||    
T  18492508 cactgctagaaaaagcaaaattagcgatgcaaattagtgacggaaaaaatgaaatttctcaca 18492446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 12351584 - 12351648
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| | |||||  ||||||||||||| ||||||||||| ||||||||||||    
T  12351584 ttcactactagaaaaagtataattaaggagggaaattagtgacggaaaaaataaaattcctcaca 12351648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 9885383 - 9885328
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||    
T  9885383 tcactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaat 9885328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 13251376 - 13251439
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||| |||||||||||||||||| ||| ||||||||| ||| ||||| ||||||||||||    
T  13251376 attcactaatagaaaaagcaaaattagagagagaaattagtgacgaaaaaagtgaaattcctca 13251439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 15050125 - 15050235
Alignment:
Q  139 atgtttgctgcaatttcccccacctcttcgaccacatacgccattattagattgccgattatttgaagcaaagcatgactttcgaatttctccttgattt 238  Q
    ||||||||| |||||||| | |||||||| ||||||   ||||   ||||||| || |||||||| |||||| |||||||| ||||||||||||||||||    
T  15050125 atgtttgctacaatttccacgacctcttccaccacagttgccacc-ttagatttcctattatttggagcaaaacatgacttacgaatttctccttgattt 15050223  T
Q  239 ccaatcaaaaca 250  Q
    ||  ||||||||    
T  15050224 ccggtcaaaaca 15050235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 22083977 - 22083915
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  22083977 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 22083915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 26939726 - 26939664
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||  ||||||||||||| ||  ||||||||||||||||||||    
T  26939726 cactactagaaaaagtaaaattactgagggaaattagtgacaaaaaaaatgaaattcctcaca 26939664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 17919676 - 17919619
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 314  Q
    ||||||||||||||| ||||||||||||| ||||| | | ||||||||||||||||||    
T  17919676 tcactactagaaaaaacaaaattagcgagagaaatcaatgacggaaaaaatgaaattc 17919619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 14886702 - 14886638
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||| |||| |||||||| || |||||||| |||| |||||||    
T  14886702 ttcactaccagaaaaagcaaaattagggaggaaaattagtgacagaaaaaataaaatccctcaca 14886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 11077785 - 11077726
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||| |||||||| |||||||||| || |||||||| || ||||||||||||    
T  11077785 tactagaaaaagaaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 11077726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 18048928 - 18048865
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| |||| ||||||||| |||| |||||||| ||||||||||| ||||| ||||||    
T  18048928 tcactactaggaaaaacaaaattagagaggaaaattagtgacggaaaaaataaaatttctcaca 18048865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 8844168 - 8844222
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||| ||||| || ||||||||||||| ||||||||||| ||||    
T  8844168 cactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaat 8844222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 12157380 - 12157430
Alignment:
Q  262 actagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  12157380 actagaaaaagcaaaattaaggagggaaattagtgacggaaaaaataaaat 12157430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 12951847 - 12951785
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||| ||||||    
T  12951847 cactactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatttctcaca 12951785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 33191219 - 33191182
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagt 295  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  33191219 cactattagaaaaagcaaaattagcgagggaaattagt 33191182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 9060222 - 9060167
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||  ||| ||||||||| ||||||||||| |||| |||||||    
T  9060222 agaaaaagcaaaattaaagagcgaaattagtgacggaaaaaataaaatccctcaca 9060167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 14872255 - 14872196
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||| |||||||| |||||||||| || |||||||| || ||||||||||||    
T  14872255 tactaggaaaagaaaaattagagagggaaatttgtgacggaaaacataaaattcctcaca 14872196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 18033525 - 18033587
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| |||||||||||||| |||||||||| || |||| ||| || ||||||||||||    
T  18033525 tcactactaggaaaagcaaaattagggagggaaatttgtgacgg-aaacattaaattcctcaca 18033587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 1955015 - 1954957
Alignment:
Q  262 actagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||  |||||||| ||| ||||||||||| |||||| |||||    
T  1955015 actaggaaaagcaaaattaggaagggaaatgagtgacggaaaaaataaaattcgtcaca 1954957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 14772800 - 14772738
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||| ||| |||||| || ||| |||| || ||||||||||||    
T  14772800 cactattagaaaaagcaaaattagggagagaaatttgtgacgaaaaacataaaattcctcaca 14772738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 20692817 - 20692867
Alignment:
Q  264 tagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 314  Q
    |||||||| |||||||| ||||| |||||||| ||||||||||| ||||||    
T  20692817 tagaaaaaacaaaattaacgaggaaaattagtgacggaaaaaataaaattc 20692867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 14036751 - 14036714
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagt 295  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  14036751 cactactaaaaaaaggaaaattagcgagggaaattagt 14036714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 11530364 - 11530304
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||| ||| |||||||||||||| |||||||||| || |||||||| || ||||| ||||    
T  11530364 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctca 11530304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 12845124 - 12845080
Alignment:
Q  276 aattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  12845124 aattagggagggaaattagtgacggaaaaaataaaattgctcaca 12845080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 22055622 - 22055674
Alignment:
Q  268 aaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| ||||||||| ||||||||||| | || |||||||| ||||||||||||    
T  22055622 aaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcaca 22055674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 27705531 - 27705499
Alignment:
Q  288 aaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||    
T  27705531 aaattagttacggaaaaaatgaaattcctcaca 27705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 48404997 - 48404933
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48404997 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 48404933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 27449224 - 27449161
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27449224 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 27449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 43329763 - 43329825
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43329763 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 43329825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 5261075 - 5261010
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  5261075 attcactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 5261010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 19223586 - 19223522
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  19223586 ttcactactagaaaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattcctcaca 19223522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 26098949 - 26098886
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26098949 tcactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 26098886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 8110474 - 8110412
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8110474 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 8110412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 9652713 - 9652651
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9652713 cactactagaaaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattcctcaca 9652651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 13921460 - 13921398
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  13921460 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 13921398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 18091547 - 18091609
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18091547 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 18091609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 19269864 - 19269926
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19269864 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 19269926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 21816856 - 21816794
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21816856 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 21816794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 25882705 - 25882643
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25882705 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 25882643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 26390634 - 26390696
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26390634 cactactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcaca 26390696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 29236183 - 29236117
Alignment:
Q  254 aattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  29236183 aattcactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 29236117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 8428307 - 8428244
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8428307 tcactactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 8428244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 11915892 - 11915833
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11915892 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctca 11915833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 29956508 - 29956445
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  29956508 tcactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 29956445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 30005663 - 30005600
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  30005663 tcactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 30005600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 8546380 - 8546318
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  8546380 cactaccagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 8546318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 10941665 - 10941727
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  10941665 cactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcaca 10941727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 11219273 - 11219211
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11219273 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 11219211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13905038 - 13905100
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  13905038 cactactagaaaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattcctcaca 13905100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 17762777 - 17762715
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17762777 cactactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 17762715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 18104530 - 18104592
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  18104530 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaattaaattcctcaca 18104592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19064097 - 19064035
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19064097 cactactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 19064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 29704041 - 29704094
Alignment:
Q  267 aaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29704041 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 29704094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 7623529 - 7623593
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  7623529 ttcactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaatttctcaca 7623593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 11085342 - 11085402
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  11085342 cactactagaaaaagtaaaattagcgagagaaatcagtaacggaaaaaatgaaattcctca 11085402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 3461309 - 3461372
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||||||    
T  3461309 tcactactagaaaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattcctcaca 3461372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 11007682 - 11007745
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||    
T  11007682 tcactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcgtcaca 11007745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 18380160 - 18380097
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||    
T  18380160 tcactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaatgaaattcttcaca 18380097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 1310959 - 1311021
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||    
T  1310959 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaaatcctcaca 1311021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 1745488 - 1745549
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  1745488 cactactaaaaaaagcaaaattagcgagggaaattagtgacgg-aaaaatgaaattcctcaca 1745549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 11837214 - 11837276
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| |||||||||||||||||||| || | ||||||||||||||||||||||    
T  11837214 cactactagaaaaaacaaaattagcgagggaaattcgtgatggaaaaaatgaaattcctcaca 11837276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 23773616 - 23773550
Alignment:
Q  254 aattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||| |||||||||  |||||||||||| |||||| |||||||||||||||||    
T  23773616 aattcactactagaaaaaacaaaattagtaagggaaattagtgacggaagaaatgaaattcctcaca 23773550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 6088227 - 6088288
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  6088227 tcactactagaaaaagcaaaataagtaagggaaattagtgacggaaaaaatgaaattcctca 6088288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 18539932 - 18539879
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18539932 agaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctca 18539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 4393357 - 4393412
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  4393357 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcaca 4393412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 21020202 - 21020146
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||    
T  21020202 ttcactactaggaaaagcaaaattagggagggaaattagtgacggaaaaaataaaat 21020146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 6447246 - 6447305
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    ||||||||| |||||||||||||| ||||||||||||| | ||||||||| |||||||||    
T  6447246 cactactaggaaaagcaaaattagggagggaaattagtgatggaaaaaataaaattcctc 6447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 10803856 - 10803793
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||||||||    
T  10803856 cactactagaaaaagccaaattagggagggaaattaatgacggaaaaaaatgaaattcctcaca 10803793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 19610474 - 19610411
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  19610474 tcactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 19610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 47263264 - 47263327
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||| ||||||| || || |||||||| ||||||||||||    
T  47263264 tcactactagaaaaagcaaaattaacgaaggaaattggtgacagaaaaaattaaattcctcaca 47263327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 5565857 - 5565803
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||    
T  5565857 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaat 5565803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 15063992 - 15064054
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  15063992 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 15064054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17269604 - 17269666
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||| ||||||||   | ||||||||| ||||||||||||    
T  17269604 cactactagaaaaagcaaaattagcgatggaaattaacgatggaaaaaataaaattcctcaca 17269666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 20761950 - 20762004
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||    
T  20761950 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaat 20762004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 21490034 - 21490096
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||| ||||||||| | | ||||||||||||||||| ||||||    
T  21490034 cactactagaaaaaacaaaattagtgagggaaatcaatgacggaaaaaatgaaatttctcaca 21490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 28859710 - 28859664
Alignment:
Q  274 aaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28859710 aaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 28859664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 29451231 - 29451169
Alignment:
Q  257 tcactactagaaaaag-caaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  29451231 tcactactagaaaaaaacaaaattaacgagggaaattagtgacggaaaaaatgaaatttctca 29451169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 37283662 - 37283596
Alignment:
Q  254 aattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| ||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  37283662 aattcactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 37283596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 30219473 - 30219413
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||    
T  30219473 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctca 30219413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 31250224 - 31250165
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    |||||||||||||| |||||||||| |||| | |||||| ||||||||||| ||||||||    
T  31250224 tcactactagaaaatgcaaaattagggaggaagattagtgacggaaaaaataaaattcct 31250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 8543603 - 8543546
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    ||||| |||||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  8543603 cactattagaaaaaacaaaattagcgagggaaattagtgatgg-aaaaatgaaattcct 8543546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 16299996 - 16299934
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| ||| |||||| || |||||||| || ||||||||||||    
T  16299996 cactactaggaaaagcaaaattagggagcgaaatttgtgacggaaaacataaaattcctcaca 16299934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 23217208 - 23217270
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| |||||| |||||||| ||||||||||| | | ||||||||| ||||||||||||    
T  23217208 cactactaaaaaaagaaaaattagggagggaaattaatgagggaaaaaatcaaattcctcaca 23217270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 26963254 - 26963304
Alignment:
Q  263 ctagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaatt 313  Q
    ||||||||| |||||||| |||||||||||||| ||| |||||||||||||    
T  26963254 ctagaaaaaacaaaattaacgagggaaattagtgacgtaaaaaatgaaatt 26963304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 29216131 - 29216065
Alignment:
Q  254 aattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||| |||||||||||||  |||| ||||| || |||||||| || ||||||||||||    
T  29216131 aattcactactaggaaaagcaaaattatggaggaaaatttgtgacggaaaacataaaattcctcaca 29216065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 46012728 - 46012782
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||||||| ||||    
T  46012728 cactactagaaaaagcaaaatcagggaggaaaattagtgacggaaaaaataaaat 46012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 46942622 - 46942560
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||| || |||||||||| || |||||||| |||| |||||||    
T  46942622 cactactagaaaaatcaaaattagggaaggaaattagtgacagaaaaaattaaatccctcaca 46942560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 1628347 - 1628290
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||| |||||||| ||||||||||| | | ||||||||| ||||||||||    
T  1628347 tactagaaaaagtaaaattagggagggaaattaatgatggaaaaaataaaattcctca 1628290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 11386468 - 11386427
Alignment:
Q  260 ctactagaaaaagcaaaattagcgagggaaattagtaacgga 301  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  11386468 ctactagaaaaagcaaaattagcgatggaaattagtgacgga 11386427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 27969049 - 27968996
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||||||| || ||||||||||||| |||||| |||| ||||    
T  27969049 actactagaaaaagcaaaatcagggagggaaattagtgacggaacaaataaaat 27968996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 10772053 - 10772101
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    ||||||||||||||| ||||||| |||||||||||||| || |||||||    
T  10772053 cactactagaaaaagtaaaattaacgagggaaattagtgacagaaaaaa 10772101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 36543885 - 36543830
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||| |||||||| |||| |||||||| | ||||||||| ||||    
T  36543885 tcactactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaat 36543830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 36564438 - 36564493
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||| |||||||| |||| |||||||| | ||||||||| ||||    
T  36564438 tcactactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaat 36564493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 5744551 - 5744489
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||| ||||| || |||||||| || |||| |||||||    
T  5744551 cactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcaca 5744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 5781510 - 5781448
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| |||| ||||| || |||||||| || |||| |||||||    
T  5781510 cactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcaca 5781448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 15501550 - 15501608
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattc 314  Q
    |||||||||||||||| ||||||||||||  |||||| | |||| ||||||||||||||    
T  15501550 tcactactagaaaaagtaaaattagcgagaaaaattaatgacggaaaaaaatgaaattc 15501608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 21088885 - 21088831
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||  ||||||||| |||| ||||||||||||| ||||||||||| ||||    
T  21088885 cactactaagaaaagcaaagttagggagggaaattagtgacggaaaaaataaaat 21088831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 50665636 - 50665698
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||  |||||||||||||| ||||||||||  | |||||||| || ||||||||||||    
T  50665636 cactactaagaaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcaca 50665698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 6718815 - 6718783
Alignment:
Q  288 aaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||    
T  6718815 aaattagtgacggaaaaaatgaaattcctcaca 6718783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 19545615 - 19545583
Alignment:
Q  288 aaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||||||||    
T  19545615 aaattagtgacggaaaaaatgaaattcctcaca 19545583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 20088540 - 20088504
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattag 294  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  20088540 cactactagaaaaagtaaaattagagagggaaattag 20088504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 26830440 - 26830504
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa-tgaaattcctcaca 320  Q
    |||||| ||||||||| |||||||| |||| |||||| | |||||||||| | ||||||||||||    
T  26830440 tcactattagaaaaagaaaaattagggaggaaaattaatgacggaaaaaaataaaattcctcaca 26830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 7111945 - 7112008
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7111945 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 7112008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 4586758 - 4586820
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4586758 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 4586820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 19839318 - 19839254
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  19839318 ttcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 19839254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 22168405 - 22168345
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22168405 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctca 22168345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 9238624 - 9238687
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9238624 tcactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 9238687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 9670478 - 9670541
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  9670478 tcactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 9670541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 38645888 - 38645825
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  38645888 tcactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcaca 38645825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 44783620 - 44783558
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44783620 cactactagaaaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattcctcaca 44783558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 4627079 - 4627140
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  4627079 actactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcaca 4627140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 5473986 - 5473925
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcac 319  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5473986 cactactagaaaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattcctcac 5473925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 45091400 - 45091339
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  45091400 ttcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctc 45091339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 54539426 - 54539361
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  54539426 attcactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaattcctcaca 54539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 38619984 - 38619924
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  38619984 cactactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctca 38619924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 30268988 - 30269047
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  30268988 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctc 30269047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 30283201 - 30283142
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  30283201 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctc 30283142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 55309212 - 55309275
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  55309212 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattcctcaca 55309275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13564915 - 13564977
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  13564915 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcaca 13564977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 27040025 - 27040087
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  27040025 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcaca 27040087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 32175737 - 32175799
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  32175737 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcaca 32175799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 45532579 - 45532641
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45532579 cactattagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 45532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 42055540 - 42055472
Alignment:
Q  252 tcaattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| |||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||||    
T  42055540 tcaactcactactagaaaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattcctcaca 42055472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 2275677 - 2275740
Alignment:
Q  258 cactactagaaaaagcaaaa-ttagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  2275677 cactactagaaaaaacaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 2275740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 29625463 - 29625400
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29625463 tcactaatataaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcaca 29625400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13028816 - 13028878
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||    
T  13028816 cactactagaaaaagcaaacttagcgaggaaaattagtgacggaaaaaatgcaattcctcaca 13028878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 18715039 - 18714977
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||    
T  18715039 cactactagaaaaagcaatattagcgagggaaataagtgacggaaaaaataaaattcctcaca 18714977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 19680424 - 19680486
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  19680424 cactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcaca 19680486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 46286229 - 46286291
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||    
T  46286229 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattcctcaca 46286291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 263 - 320
Target Start/End: Original strand, 37378628 - 37378685
Alignment:
Q  263 ctagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  37378628 ctagaaaaagcaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcaca 37378685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 18051969 - 18051914
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  18051969 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcaca 18051914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 30568006 - 30568061
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30568006 agaaaaaacaaaattagcgagcgaaattagtgacggaaaaaatgaaattcctcaca 30568061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 25026694 - 25026632
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  25026694 cactattagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcaca 25026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 24682328 - 24682389
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| |||||||| ||||||||||| | ||||||||||| ||||||||||||    
T  24682328 actactagaaaaagaaaaattagggagggaaattaatgacggaaaaaataaaattcctcaca 24682389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 30508131 - 30508062
Alignment:
Q  251 ctcaattcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||| ||||||||||||||||||||||||||||| ||||  || ||| ||||||| ||||||||||||    
T  30508131 ctcaatgcactactagaaaaagcaaaattagcgaggaaaatctgtgacgaaaaaaataaaattcctcaca 30508062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 30420033 - 30420089
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 314  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||    
T  30420033 cactactagaaaaagcaaaattagggaggaaaattagtgacggaaaaaataaaattc 30420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 9239280 - 9239343
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||| ||||| || ||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  9239280 tcactacaagaaagagtaaaattaacgagggaaattagtgacggaaaaaatgaaattgctcaca 9239343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 1638584 - 1638522
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||| ||||||||| ||||||||||||| ||||||||||| |||| |||||||    
T  1638584 cactactaggaaaaacaaaattagggagggaaattagtgacggaaaaaataaaatccctcaca 1638522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 33914198 - 33914136
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||    
T  33914198 ttcactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctca 33914136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 36689815 - 36689754
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||| ||||||| |||||||| |||||||||||||| | ||||||||||||||| ||||    
T  36689815 tcactacaagaaaaaacaaaattaacgagggaaattagtgatggaaaaaatgaaatttctca 36689754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 8879022 - 8878966
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||||||| ||||    
T  8879022 ttcactacaagaaaaagcaaaatcagagagggaaattagtgacggaaaaaataaaat 8878966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 12072099 - 12072043
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 314  Q
    ||||| |||||||||||||||||||||| ||||||||| |  |||||||||||||||    
T  12072099 cactattagaaaaagcaaaattagcgagcgaaattagtgatcgaaaaaatgaaattc 12072043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 9913395 - 9913333
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||  |||||||| |||| |||||||| ||||||||||| |||| |||||||    
T  9913395 cactactagaaaaattaaaattagggaggaaaattagtgacggaaaaaattaaatccctcaca 9913333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 22128312 - 22128366
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||| |||||| || ||||||||||||| ||||||||||| ||||    
T  22128312 cactactagaaaaaacaaaatcagggagggaaattagtgacggaaaaaataaaat 22128366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 12106120 - 12106059
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||| ||||||||| |||||||||||||||||||| | | ||||||||| ||||| ||||    
T  12106120 tcactattagaaaaagtaaaattagcgagggaaattattgatggaaaaaataaaatttctca 12106059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 9058950 - 9059014
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||| |||||||||||||| |||||||||| || || ||||| || ||||| ||||||    
T  9058950 ttcactactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatttctcaca 9059014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 5399747 - 5399684
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| ||||||||| |||| |||| ||||| || |||||||| || ||||||||||||    
T  5399747 tcactactaggaaaagcaaacttagggaggaaaatttgtgacggaaaacataaaattcctcaca 5399684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 4606829 - 4606883
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||| ||||| ||||    
T  4606829 cactactaggaaaagtaaaattagggagggaaattagtgacggacaaaataaaat 4606883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 16915506 - 16915452
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||||||||||||||||| || |||| |||||||| | ||||||||| ||||    
T  16915506 cactactagaaaaagcaaaatcagggaggaaaattagtgatggaaaaaataaaat 16915452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 38223643 - 38223589
Alignment:
Q  262 actagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    ||||||||| | |||||||| |||||| |||||| ||||||||||| ||||||||    
T  38223643 actagaaaatgtaaaattagggagggagattagtgacggaaaaaataaaattcct 38223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 25147848 - 25147796
Alignment:
Q  268 aaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||  | |||||||| || ||||||||||||    
T  25147848 aaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcaca 25147796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 41736308 - 41736245
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41736308 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 41736245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 12779735 - 12779673
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12779735 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 12779673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 20065074 - 20065136
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20065074 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 20065136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 28841342 - 28841404
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28841342 cactactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 28841404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 37552362 - 37552300
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37552362 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 37552300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 15636734 - 15636797
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15636734 tcactaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 15636797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 22140363 - 22140426
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22140363 tcactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcaca 22140426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 27039907 - 27039970
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  27039907 tcactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaca 27039970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 44476374 - 44476437
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  44476374 tcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcaca 44476437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 7093703 - 7093641
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7093703 cactactagtaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 7093641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13788055 - 13788117
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13788055 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcaca 13788117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 43408511 - 43408573
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  43408511 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 43408573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 28319580 - 28319641
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  28319580 actactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 28319641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 1141664 - 1141609
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1141664 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 1141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 18551252 - 18551315
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  18551252 tcactactaaaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 18551315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 21293710 - 21293773
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  21293710 tcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 21293773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 32185967 - 32185908
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  32185967 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctc 32185908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 32300579 - 32300524
Alignment:
Q  265 agaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32300579 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 32300524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 32009088 - 32009025
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  32009088 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcaca 32009025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 37723991 - 37724054
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37723991 tcactgctagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaca 37724054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 8430431 - 8430369
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  8430431 cactactagaaaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattcctcaca 8430369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 14757121 - 14757183
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||    
T  14757121 cactactagaaaaagcaaaattagcgaagaaaattaatgacggaaaaaatgaaattcctcaca 14757183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 23857958 - 23858019
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  23857958 cactactagaaaaagcaaaattagcgagggaaattagtgacgg-gaaaatgaaattcctcaca 23858019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 44723067 - 44723009
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  44723067 cactactagaaaaagcaaaattagcgagggaaattaatgatggaaaaaatgaaattcct 44723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 23388379 - 23388440
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||||||||| |||||    
T  23388379 actactagaaaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattcttcaca 23388440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 263 - 320
Target Start/End: Original strand, 38362276 - 38362333
Alignment:
Q  263 ctagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  38362276 ctagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcaca 38362333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 28262496 - 28262437
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  28262496 tactagaaaaagtaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcaca 28262437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 41637754 - 41637691
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  41637754 tcactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 41637691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 13613093 - 13613155
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  13613093 cactactggaaaaagaaaaattagcgaggaaaattagtgacgaaaaaaatgaaattcctcaca 13613155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 26243321 - 26243383
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||| ||||||||||||||  ||| |||||| ||||||||||||    
T  26243321 cactactagaaaaagcaaaattaacgagggaaattagtggcggtaaaaataaaattcctcaca 26243383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 16098915 - 16098971
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||    
T  16098915 ttcactactagaaaaatcaaaattagggagggaaattagtaacagaaaaaattaaat 16098971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 29749403 - 29749465
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||||||||    
T  29749403 cactactagaaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcaca 29749465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 12860235 - 12860290
Alignment:
Q  264 tagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcac 319  Q
    |||||||||||||||||| |||| |||||||| ||||||||| |||||| ||||||    
T  12860235 tagaaaaagcaaaattagggaggaaaattagtgacggaaaaagtgaaatccctcac 12860290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 22192315 - 22192260
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||||||||||||| || ||| ||||||||| ||||||||||| ||||    
T  22192315 tcactactagaaaaagcaaaatcagggagagaaattagtgacggaaaaaataaaat 22192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 30783474 - 30783411
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| ||||||||||||||  ||||||||| || |||||||| || ||||||||||||    
T  30783474 tcactactaggaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcaca 30783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 27327751 - 27327689
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| |||||||||||||| || ||||||| || |||||||| || ||||||||||||    
T  27327751 cactactaggaaaagcaaaattagggatggaaatttgtgacggaaaacataaaattcctcaca 27327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 36550970 - 36550909
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||||||| |||| |||||||    
T  36550970 cactactagaaaaaacaaaattagagagggaaattagtgatggaaaaaat-aaatccctcaca 36550909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 40018939 - 40018882
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaatt 313  Q
    |||||||||||||||| ||||||||   |||||||||||| ||||||||||| |||||    
T  40018939 ttcactactagaaaaaacaaaattaaaaagggaaattagtgacggaaaaaataaaatt 40018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 26687688 - 26687738
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaa 306  Q
    |||||||||||| ||||||||||||  ||||||||||| | ||||||||||    
T  26687688 ttcactactagataaagcaaaattaaggagggaaattaatgacggaaaaaa 26687738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 31266489 - 31266427
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||| ||||| |||||||| ||||||||||  | |||||||| || ||||||||||||    
T  31266489 cactactaggaaaagtaaaattagggagggaaattttttacggaaaacataaaattcctcaca 31266427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 9004307 - 9004368
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||  ||||||| ||||| | |||||| |||||| |||||||||| ||||    
T  9004307 tcactactagaaaaaataaaattaacgaggaatattagtgacggaagaaatgaaatttctca 9004368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 9590588 - 9590551
Alignment:
Q  275 aaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  9590588 aaattagggagggaaattagtgacggaaaaaatgaaat 9590551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 35697573 - 35697536
Alignment:
Q  275 aaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  35697573 aaattagggagggaaattagtaacggaaaaaataaaat 35697536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 37802376 - 37802433
Alignment:
Q  255 attcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaat 312  Q
    |||||||||||| |||||||||||||| ||| ||||||  | ||||||||||| ||||    
T  37802376 attcactactaggaaaagcaaaattagggagagaaattgatgacggaaaaaataaaat 37802433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 44366007 - 44366059
Alignment:
Q  268 aaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| ||||||||| ||||||||||| | || |||||||| ||||||||||||    
T  44366007 aaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcaca 44366059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 22352 - 22288
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22352 ttcactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattcctcaca 22288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 5979 - 6041
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5979 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 6041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 9229 - 9291
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  9229 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcaca 9291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 19742 - 19680
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  19742 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcaca 19680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 10663 - 10725
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10663 cactgctagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 10725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17617 - 17679
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17617 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcaca 17679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 219775 - 219713
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  219775 cactactagaaaaagcaaaattagcgacggaaattagtgacggaaaaaatgaaattcctcaca 219713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 182668 - 182607
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  182668 actactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcaca 182607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 215663 - 215725
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  215663 cactactaaaaaaagcaaaattagcgagagaaattagcgacggaaaaaatgaaattcctcaca 215725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 3881 - 3819
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  3881 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcaca 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 202914 - 202851
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  202914 tcactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattgctcaca 202851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 274665 - 274727
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  274665 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcaca 274727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 84442 - 84380
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  84442 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcaca 84380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 8110 - 8168
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  8110 cacttctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcct 8168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 21842 - 21900
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcct 316  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  21842 cacttctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcct 21900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 14990 - 15050
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  14990 cactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctca 15050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 12791 - 12731
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12791 cactacttgaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctca 12731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 7643 - 7584
Alignment:
Q  259 actactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  7643 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctca 7584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 39703 - 39762
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctc 317  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  39703 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctc 39762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 26622 - 26560
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  26622 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcaca 26560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 44056 - 43994
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  44056 cactactagaaaaagaaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcaca 43994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 9949 - 9887
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||    
T  9949 cactactagaaaaagcaaaattagcgagtgaaattagtgaaggaaaaaatgaaatttctcaca 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 84678 - 84736
Alignment:
Q  262 actagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  84678 actagaaaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattcctcaca 84736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 120987 - 121049
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||| |||||| |||||||| ||||||||||||| | | ||||||| ||||| ||||||    
T  120987 cactactaaaaaaagtaaaattagagagggaaattagttatgaaaaaaataaaatttctcaca 121049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 6931 - 6878
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 314  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  6931 tactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattc 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 37786 - 37849
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  37786 tcactactagaaaaaacaaaattagcaggggaaattagtgacggaaaaaataaaattcctcaca 37849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 74720 - 74779
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  74720 tactagaaaaggcaaaattagcaagggaaattagtgacggaaaaaatgaaatttctcaca 74779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 440102 - 440040
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||||||||||||| ||||||||| ||| | |||||| ||||||||||||||||||||||||    
T  440102 cactactagaaaaagtaaaattagcaaggaatattagtgacggaaaaaatgaaattcctcaca 440040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 918 - 979
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacgg-aaaaaatgaaattcctca 318  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||||    
T  918 cactactagaaaaagcaaaattagcgagggaaattactgacggaaaaaaataaaattcctca 979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 173585 - 173525
Alignment:
Q  257 tcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  173585 tcactattagaaaaagcaaaattagcga-ggaaattagtgacggaaaaaatgaaatttctca 173525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 7592 - 7533
Alignment:
Q  261 tactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||||||||||| |||||    
T  7592 tactagaaaaagtaaaattaacgaggaaaattagtgacggaaaaaatgaaattcttcaca 7533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 58723 - 58661
Alignment:
Q  256 ttcactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctca 318  Q
    ||||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||||||    
T  58723 ttcactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctca 58661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 3162 - 3224
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||| || || |||||||||    
T  3162 cactaatagaaaaagaaaaattagggagggaaattagtgacggaaaagataaagttcctcaca 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 10297 - 10235
Alignment:
Q  258 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcaca 320  Q
    |||| |||| |||||||||||||| |||||||||| || |||||||| || ||||||||||||    
T  10297 cactgctaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaca 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 92392 - 92344
Alignment:
Q  6 acaaagacctctctcttaaa-ggaaactaattaacttacttggccacca 53  Q
    ||||||| |||||||||||| || |||||||||||||||||||||||||    
T  92392 acaaagaactctctcttaaaaggcaactaattaacttacttggccacca 92344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University