View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14563_high_16 (Length: 211)
Name: NF14563_high_16
Description: NF14563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14563_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 2286513 - 2286701
Alignment:
| Q |
17 |
atattaatgtatatatacacaggaccagagcaggtaggtagaacgttacgatcatatatta----atgaaatacaattaaccatactattaaacttttat |
112 |
Q |
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| T |
2286513 |
atattaatgtatatatacacaggaccagagcaggtaggtagaacgttacgatcatatattaattaatgaaatacaattaaccatactattaaacttttat |
2286612 |
T |
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| Q |
113 |
tggagctactagtacatatgcatatgcagcataaattcaaattaaagtgatgtctgacattagaatagaacagttgttttcttctcact |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2286613 |
tggagctactagtacatatgcatatgcagcataaattcaaattaaagtgatgtctgacattagaatagaacagttgttttcttgtcact |
2286701 |
T |
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