View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14564_low_7 (Length: 364)
Name: NF14564_low_7
Description: NF14564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14564_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 5 - 351
Target Start/End: Complemental strand, 47812578 - 47812232
Alignment:
| Q |
5 |
attattcttagccttaggactcaatgaacggcttataatgaggataatatgaagattttttatgctcctactccatgtttgagtagccttctgttagcat |
104 |
Q |
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| T |
47812578 |
attattcttagccttaggactcaatgaacggcttataatgaggataatatgaagattttttatgctcctactccatgtttgagtagccttctgttagcat |
47812479 |
T |
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| Q |
105 |
atgtatcgggaaggactttccttaggacttaattttccctttttcttgttctgttcttttcagaccagtagcaaaaaacgatatcctcttttcaaattta |
204 |
Q |
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| T |
47812478 |
atgtatcgggaaggactttccttaggacttaattttccctttttcttgttctgttcttttcagaccagtagcaaaaaacgatatcctcttttcaaattta |
47812379 |
T |
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| Q |
205 |
tcttgatcattaactaattagatgtcgatcttgacacaaataataaaataagattcttttatattttaaaacagcactcaaatacagataaattcttcat |
304 |
Q |
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| T |
47812378 |
tcttgatcattaactaattagatgtcgatcttgacacaaataataaaataagattcttttatattttaaaacagcactcaaatacagataaattcttcat |
47812279 |
T |
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| Q |
305 |
aatttaggataaaatatacatgtatcctcttatcagaacaatcttgt |
351 |
Q |
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| T |
47812278 |
aatttaggataaaatatacatgtatcctcttatcagaacaatcttgt |
47812232 |
T |
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