View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14565_high_36 (Length: 251)
Name: NF14565_high_36
Description: NF14565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14565_high_36 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 54116556 - 54116801
Alignment:
| Q |
3 |
aaccattttgctaatacataccaatcatgatatcattattgttaggcaagtgtataacatggtaggatcacttcattgtactctatttcagaaaaacaga |
102 |
Q |
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| T |
54116556 |
aaccattttgctaatacataccaatcatgatatcattattgttaggcaagtgtataacatggtaggatcacttcattgtactctatttcagaaaaacaga |
54116655 |
T |
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| Q |
103 |
accaccctattgaaaattcaaacaactaagcctatacaaaatgtaagttgaagaagggtattgaaagcaataacaaattgtagctatgaataacttgttt |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
54116656 |
accaccctattgaaaattcaaacaactaagcctatacaaaatgtaagttgaagaatggtattgaaagcaataacaaattgtagctatgaatgacttgttt |
54116755 |
T |
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| Q |
203 |
gtgatgtgactaactatagatccattaacttttttctttcatttca |
248 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
54116756 |
gtgatgtgactaactacagatccattaacttttttctttcatttca |
54116801 |
T |
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