View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14565_low_19 (Length: 383)

Name: NF14565_low_19
Description: NF14565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14565_low_19
NF14565_low_19
[»] chr3 (60 HSPs)
chr3 (65-368)||(13609322-13609615)
chr3 (68-357)||(14149906-14150201)
chr3 (72-318)||(14074406-14074637)
chr3 (1-47)||(9862538-9862584)
chr3 (1-47)||(10811140-10811186)
chr3 (1-47)||(19961937-19961983)
chr3 (1-47)||(34456795-34456841)
chr3 (3-47)||(32362938-32362982)
chr3 (1-47)||(26014817-26014862)
chr3 (1-47)||(32457776-32457821)
chr3 (1-47)||(33389013-33389059)
chr3 (1-47)||(42357101-42357146)
chr3 (1-47)||(46623912-46623957)
chr3 (1-47)||(47472334-47472379)
chr3 (1-47)||(52939658-52939703)
chr3 (1-47)||(55400004-55400050)
chr3 (1-46)||(41637300-41637345)
chr3 (1-45)||(48346833-48346877)
chr3 (4-47)||(32146009-32146052)
chr3 (1-44)||(42888993-42889036)
chr3 (1-47)||(288730-288776)
chr3 (1-47)||(5244234-5244279)
chr3 (1-47)||(14207278-14207324)
chr3 (1-47)||(14215026-14215072)
chr3 (1-47)||(16129527-16129572)
chr3 (1-47)||(16969587-16969632)
chr3 (1-47)||(19150339-19150385)
chr3 (1-47)||(21196129-21196175)
chr3 (1-47)||(22813077-22813122)
chr3 (5-47)||(23553613-23553655)
chr3 (1-47)||(25188485-25188531)
chr3 (1-47)||(26279889-26279934)
chr3 (1-47)||(27168702-27168748)
chr3 (1-47)||(29573376-29573422)
chr3 (1-47)||(31376785-31376831)
chr3 (1-47)||(31931039-31931085)
chr3 (1-47)||(34057973-34058019)
chr3 (1-47)||(34733312-34733357)
chr3 (1-47)||(37302551-37302596)
chr3 (1-47)||(37894263-37894309)
chr3 (1-47)||(37927225-37927271)
chr3 (1-47)||(38926633-38926678)
chr3 (1-47)||(41308930-41308975)
chr3 (1-47)||(41443211-41443257)
chr3 (1-47)||(45054979-45055025)
chr3 (1-47)||(47101527-47101573)
chr3 (1-47)||(48353001-48353047)
chr3 (1-47)||(48405415-48405461)
chr3 (1-47)||(49167755-49167801)
chr3 (1-47)||(49417580-49417626)
chr3 (1-47)||(50559232-50559278)
chr3 (1-47)||(52326024-52326069)
chr3 (1-46)||(11173464-11173508)
chr3 (6-47)||(37143126-37143167)
chr3 (3-43)||(6093901-6093941)
chr3 (15-47)||(28700477-28700509)
chr3 (7-47)||(31425539-31425579)
chr3 (3-47)||(36671037-36671080)
chr3 (3-47)||(51464295-51464338)
chr3 (7-47)||(52963342-52963382)
[»] chr7 (41 HSPs)
chr7 (120-368)||(36014341-36014592)
chr7 (1-47)||(2008878-2008924)
chr7 (1-47)||(12007206-12007252)
chr7 (1-47)||(33845047-33845093)
chr7 (1-47)||(47448831-47448877)
chr7 (1-44)||(43081910-43081953)
chr7 (1-47)||(13152598-13152643)
chr7 (1-43)||(31445326-31445368)
chr7 (1-47)||(32777727-32777773)
chr7 (1-47)||(34978301-34978347)
chr7 (1-48)||(15325658-15325704)
chr7 (1-47)||(9792771-9792817)
chr7 (1-47)||(30941391-30941436)
chr7 (1-47)||(38259068-38259114)
chr7 (1-47)||(41018668-41018714)
chr7 (1-47)||(41893920-41893966)
chr7 (1-47)||(43159595-43159641)
chr7 (1-47)||(44895593-44895638)
chr7 (1-47)||(49069254-49069300)
chr7 (2-47)||(10700207-10700252)
chr7 (3-44)||(27568025-27568066)
chr7 (7-47)||(23910277-23910317)
chr7 (3-47)||(37899328-37899372)
chr7 (4-47)||(44649349-44649392)
chr7 (1-47)||(22195150-22195196)
chr7 (1-47)||(22623393-22623439)
chr7 (1-47)||(25192905-25192950)
chr7 (1-47)||(28824508-28824553)
chr7 (1-47)||(33057384-33057430)
chr7 (1-39)||(33578335-33578373)
chr7 (1-47)||(35098724-35098769)
chr7 (1-47)||(35586793-35586839)
chr7 (1-47)||(37899233-37899279)
chr7 (1-47)||(38861101-38861146)
chr7 (1-47)||(48062061-48062107)
chr7 (13-47)||(48395253-48395287)
chr7 (14-47)||(28109962-28109995)
chr7 (10-47)||(37352115-37352152)
chr7 (3-44)||(40417783-40417824)
chr7 (1-45)||(1471311-1471355)
chr7 (3-47)||(2362669-2362712)
[»] chr8 (57 HSPs)
chr8 (1-47)||(1068611-1068657)
chr8 (1-47)||(2730981-2731027)
chr8 (1-47)||(26026901-26026947)
chr8 (1-47)||(33107887-33107933)
chr8 (1-47)||(34435757-34435803)
chr8 (1-47)||(7598713-7598759)
chr8 (1-47)||(44061722-44061768)
chr8 (7-47)||(5601013-5601053)
chr8 (7-47)||(5639567-5639607)
chr8 (3-47)||(25987809-25987853)
chr8 (1-45)||(33451583-33451627)
chr8 (4-47)||(10839505-10839548)
chr8 (1-47)||(3946245-3946291)
chr8 (5-47)||(5771996-5772038)
chr8 (1-47)||(12284290-12284336)
chr8 (1-47)||(13106482-13106528)
chr8 (1-47)||(23754727-23754773)
chr8 (1-47)||(27325763-27325808)
chr8 (1-47)||(28772144-28772190)
chr8 (1-47)||(33100489-33100535)
chr8 (3-47)||(3547182-3547226)
chr8 (3-47)||(4658285-4658329)
chr8 (3-47)||(15716998-15717042)
chr8 (5-44)||(7612231-7612270)
chr8 (1-47)||(67181-67227)
chr8 (3-45)||(4671998-4672040)
chr8 (5-47)||(5771900-5771942)
chr8 (1-47)||(7678737-7678782)
chr8 (1-47)||(9549219-9549265)
chr8 (1-47)||(10644822-10644868)
chr8 (1-47)||(12707154-12707200)
chr8 (1-47)||(14707364-14707410)
chr8 (1-47)||(20284839-20284885)
chr8 (1-47)||(21071468-21071514)
chr8 (1-47)||(22719445-22719490)
chr8 (1-47)||(24479241-24479286)
chr8 (1-47)||(25830266-25830312)
chr8 (13-47)||(26629142-26629176)
chr8 (1-47)||(29991417-29991463)
chr8 (13-47)||(30170761-30170795)
chr8 (1-47)||(34718120-34718166)
chr8 (1-47)||(35067165-35067211)
chr8 (1-47)||(40102028-40102073)
chr8 (1-47)||(40528753-40528799)
chr8 (1-47)||(41600314-41600360)
chr8 (1-47)||(43397786-43397831)
chr8 (1-47)||(45101401-45101446)
chr8 (14-47)||(5740807-5740840)
chr8 (10-47)||(5849595-5849632)
chr8 (15-47)||(895939-895971)
chr8 (15-47)||(9047093-9047125)
chr8 (1-49)||(23793110-23793158)
chr8 (7-47)||(31249551-31249590)
chr8 (3-47)||(33279571-33279615)
chr8 (3-47)||(37449448-37449491)
chr8 (7-47)||(37792189-37792229)
chr8 (15-47)||(39211058-39211090)
[»] chr6 (28 HSPs)
chr6 (1-47)||(33712325-33712371)
chr6 (1-47)||(24900780-24900826)
chr6 (3-47)||(18065112-18065156)
chr6 (1-47)||(5080588-5080633)
chr6 (1-47)||(8505794-8505840)
chr6 (1-47)||(8645314-8645359)
chr6 (1-47)||(11635555-11635601)
chr6 (1-47)||(17551399-17551445)
chr6 (3-47)||(31883326-31883370)
chr6 (1-47)||(2242042-2242088)
chr6 (1-47)||(8098616-8098661)
chr6 (1-47)||(20822888-20822934)
chr6 (1-47)||(22079584-22079629)
chr6 (1-47)||(23632657-23632703)
chr6 (1-47)||(25811859-25811904)
chr6 (1-47)||(32459537-32459583)
chr6 (1-47)||(34047392-34047437)
chr6 (1-46)||(5739784-5739829)
chr6 (7-47)||(14910182-14910222)
chr6 (13-47)||(13093631-13093665)
chr6 (1-47)||(15318208-15318254)
chr6 (1-47)||(21506341-21506386)
chr6 (5-47)||(28982663-28982705)
chr6 (1-47)||(29383562-29383607)
chr6 (1-47)||(33421765-33421811)
chr6 (14-47)||(31517202-31517235)
chr6 (1-41)||(4820410-4820450)
chr6 (3-47)||(35077128-35077172)
[»] chr4 (44 HSPs)
chr4 (1-47)||(5932784-5932830)
chr4 (1-47)||(32012901-32012947)
chr4 (1-47)||(51255751-51255797)
chr4 (1-43)||(37060326-37060368)
chr4 (1-47)||(38519798-38519844)
chr4 (1-47)||(50721765-50721811)
chr4 (1-47)||(51734653-51734699)
chr4 (3-40)||(36130375-36130412)
chr4 (2-47)||(50831777-50831822)
chr4 (1-44)||(51577622-51577665)
chr4 (1-47)||(149505-149551)
chr4 (1-47)||(5622463-5622508)
chr4 (1-47)||(14443203-14443249)
chr4 (1-47)||(23369353-23369398)
chr4 (1-47)||(29227263-29227309)
chr4 (1-47)||(37997261-37997306)
chr4 (1-47)||(54000703-54000749)
chr4 (6-47)||(21014059-21014100)
chr4 (14-47)||(44925163-44925196)
chr4 (3-47)||(2401615-2401659)
chr4 (1-47)||(2004209-2004255)
chr4 (1-47)||(2268528-2268573)
chr4 (1-47)||(2738288-2738334)
chr4 (1-47)||(4896521-4896566)
chr4 (1-47)||(7632482-7632528)
chr4 (1-47)||(9362698-9362744)
chr4 (1-47)||(10250536-10250581)
chr4 (1-47)||(37297054-37297099)
chr4 (1-47)||(38134358-38134403)
chr4 (1-47)||(39158110-39158156)
chr4 (1-47)||(42916655-42916701)
chr4 (1-47)||(43174989-43175034)
chr4 (1-47)||(45082986-45083031)
chr4 (1-47)||(46794522-46794567)
chr4 (1-47)||(50890094-50890139)
chr4 (13-47)||(56215610-56215644)
chr4 (1-47)||(56557738-56557784)
chr4 (15-47)||(5386389-5386421)
chr4 (7-47)||(18938402-18938442)
chr4 (3-47)||(26732230-26732273)
chr4 (15-47)||(42490925-42490957)
chr4 (3-47)||(46634105-46634148)
chr4 (15-47)||(48494935-48494967)
chr4 (3-47)||(56271365-56271409)
[»] chr1 (61 HSPs)
chr1 (1-47)||(27742622-27742668)
chr1 (1-47)||(48858828-48858874)
chr1 (1-47)||(9566981-9567027)
chr1 (1-47)||(9987956-9988002)
chr1 (1-47)||(19947761-19947807)
chr1 (1-47)||(24806242-24806288)
chr1 (1-47)||(48983688-48983734)
chr1 (1-44)||(17082763-17082806)
chr1 (1-47)||(649773-649819)
chr1 (1-47)||(4213077-4213123)
chr1 (1-47)||(47642627-47642673)
chr1 (1-47)||(5771768-5771814)
chr1 (1-47)||(8350217-8350262)
chr1 (1-47)||(10890066-10890112)
chr1 (1-47)||(11947800-11947846)
chr1 (1-47)||(13489667-13489713)
chr1 (1-47)||(15083071-15083116)
chr1 (1-47)||(15705082-15705128)
chr1 (1-47)||(30467546-30467592)
chr1 (1-47)||(37685336-37685381)
chr1 (1-47)||(37700137-37700182)
chr1 (1-47)||(40439860-40439906)
chr1 (7-45)||(50148953-50148991)
chr1 (1-47)||(52362487-52362533)
chr1 (6-47)||(48261144-48261185)
chr1 (3-47)||(3159381-3159424)
chr1 (3-47)||(9897584-9897628)
chr1 (3-47)||(30735316-30735359)
chr1 (1-45)||(31826957-31827001)
chr1 (3-47)||(35529402-35529446)
chr1 (4-47)||(2571640-2571682)
chr1 (1-47)||(3982052-3982097)
chr1 (1-47)||(7919082-7919128)
chr1 (1-47)||(12798552-12798598)
chr1 (1-47)||(16583081-16583127)
chr1 (1-47)||(18434800-18434845)
chr1 (1-47)||(21433421-21433467)
chr1 (1-47)||(27465078-27465123)
chr1 (1-47)||(32915092-32915138)
chr1 (1-47)||(33100813-33100858)
chr1 (1-47)||(34008185-34008231)
chr1 (1-47)||(35369705-35369750)
chr1 (1-47)||(37619549-37619594)
chr1 (1-47)||(37843453-37843498)
chr1 (1-47)||(44519172-44519217)
chr1 (1-47)||(44789163-44789209)
chr1 (1-47)||(45333575-45333620)
chr1 (1-47)||(47214213-47214259)
chr1 (1-47)||(47820521-47820567)
chr1 (1-47)||(49931558-49931604)
chr1 (1-47)||(50226900-50226945)
chr1 (6-47)||(18982524-18982565)
chr1 (15-47)||(4857927-4857959)
chr1 (7-47)||(30570532-30570572)
chr1 (3-47)||(30658870-30658914)
chr1 (6-46)||(36775112-36775152)
chr1 (15-47)||(45272183-45272215)
chr1 (11-47)||(45333361-45333397)
chr1 (7-47)||(49020430-49020470)
chr1 (3-47)||(49065386-49065430)
chr1 (15-47)||(51571420-51571452)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-47)||(10941-10987)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-47)||(28347-28393)
[»] chr5 (47 HSPs)
chr5 (1-47)||(13089802-13089848)
chr5 (1-47)||(611869-611915)
chr5 (1-47)||(21155992-21156038)
chr5 (3-47)||(1274363-1274406)
chr5 (1-47)||(1293106-1293152)
chr5 (1-47)||(6517717-6517763)
chr5 (1-47)||(7287210-7287256)
chr5 (1-47)||(8920083-8920129)
chr5 (1-47)||(10649440-10649486)
chr5 (1-47)||(17097822-17097868)
chr5 (1-47)||(18660764-18660809)
chr5 (1-47)||(19522024-19522069)
chr5 (1-47)||(29462998-29463044)
chr5 (1-47)||(32872918-32872964)
chr5 (1-47)||(39195722-39195768)
chr5 (6-47)||(4719655-4719696)
chr5 (15-47)||(21210835-21210867)
chr5 (3-47)||(28306155-28306198)
chr5 (1-44)||(26791265-26791307)
chr5 (1-47)||(189723-189769)
chr5 (1-47)||(8097254-8097300)
chr5 (13-47)||(8728613-8728647)
chr5 (1-47)||(11148516-11148562)
chr5 (1-47)||(13309887-13309933)
chr5 (5-47)||(13739455-13739497)
chr5 (1-47)||(14011322-14011368)
chr5 (1-47)||(14321975-14322021)
chr5 (5-47)||(16594400-16594442)
chr5 (1-47)||(16690504-16690550)
chr5 (1-47)||(18695323-18695369)
chr5 (1-47)||(19481202-19481248)
chr5 (1-47)||(21922165-21922211)
chr5 (1-47)||(22098260-22098306)
chr5 (1-47)||(24468306-24468352)
chr5 (1-47)||(30640795-30640841)
chr5 (1-47)||(33037525-33037570)
chr5 (1-47)||(34381017-34381062)
chr5 (1-47)||(35634857-35634902)
chr5 (1-47)||(39595277-39595322)
chr5 (13-47)||(41621960-41621994)
chr5 (1-47)||(42446311-42446357)
chr5 (13-47)||(43057440-43057474)
chr5 (3-44)||(24860031-24860072)
chr5 (7-47)||(27487892-27487932)
chr5 (3-47)||(27546068-27546112)
chr5 (3-47)||(31748341-31748385)
chr5 (3-47)||(35075598-35075642)
[»] chr2 (51 HSPs)
chr2 (1-43)||(37316835-37316877)
chr2 (1-47)||(37731220-37731266)
chr2 (1-47)||(43057069-43057115)
chr2 (1-47)||(8848716-8848761)
chr2 (1-47)||(11965798-11965844)
chr2 (5-47)||(15260312-15260354)
chr2 (1-47)||(27490751-27490796)
chr2 (6-47)||(45376246-45376287)
chr2 (1-47)||(2563709-2563755)
chr2 (1-47)||(6999088-6999134)
chr2 (1-47)||(7502448-7502494)
chr2 (1-47)||(13765405-13765451)
chr2 (1-47)||(14871852-14871898)
chr2 (1-47)||(14876962-14877008)
chr2 (1-47)||(18254230-18254275)
chr2 (1-47)||(19916660-19916706)
chr2 (1-47)||(22526014-22526060)
chr2 (1-47)||(22888842-22888887)
chr2 (1-47)||(23690530-23690576)
chr2 (1-47)||(31922313-31922359)
chr2 (1-47)||(38821371-38821417)
chr2 (1-46)||(2144725-2144770)
chr2 (3-47)||(41042259-41042302)
chr2 (1-47)||(1352393-1352439)
chr2 (1-47)||(6170635-6170681)
chr2 (1-47)||(6336257-6336303)
chr2 (1-47)||(6511256-6511301)
chr2 (1-47)||(8427557-8427603)
chr2 (1-47)||(9194434-9194480)
chr2 (1-47)||(9207595-9207640)
chr2 (1-47)||(9990696-9990741)
chr2 (1-47)||(13711066-13711111)
chr2 (1-47)||(14233739-14233785)
chr2 (1-47)||(15269866-15269912)
chr2 (1-47)||(17388616-17388661)
chr2 (13-47)||(24727622-24727656)
chr2 (13-47)||(25507260-25507294)
chr2 (1-47)||(29349511-29349556)
chr2 (1-47)||(30977894-30977940)
chr2 (1-47)||(36587489-36587534)
chr2 (1-47)||(39449137-39449183)
chr2 (1-47)||(40504229-40504275)
chr2 (6-47)||(9979101-9979142)
chr2 (2-47)||(18510680-18510725)
chr2 (2-47)||(32750003-32750047)
chr2 (3-52)||(38911952-38912001)
chr2 (1-45)||(2076576-2076619)
chr2 (3-47)||(24766157-24766201)
chr2 (4-44)||(30831764-30831803)
chr2 (3-47)||(36132979-36133022)
chr2 (1-45)||(39234200-39234244)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-47)||(101926-101972)
[»] scaffold0432 (1 HSPs)
scaffold0432 (3-47)||(6542-6586)
[»] scaffold1956 (1 HSPs)
scaffold1956 (1-47)||(776-822)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-47)||(10969-11015)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-47)||(8673-8718)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-47)||(44786-44832)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-47)||(219685-219730)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-47)||(366299-366344)
[»] scaffold0085 (1 HSPs)
scaffold0085 (3-47)||(22876-22920)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-45)||(469658-469702)


Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 65 - 368
Target Start/End: Original strand, 13609322 - 13609615
Alignment:
Q  65 ttgagagcaatatataacatagtttattctcttgttctttgagcaaaaaactcattttcttcttgaaaccctagagaga-aaactcggaaccatgtccga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||           ||||||||||||||||||| ||||||||||||||||||||    
T  13609322 ttgagagcaataaataacatagttcattctcttgttctttcagcaaaaa-----------tcttgaaaccctagagagagaaactcggaaccatgtccga 13609410  T
Q  164 cgcgttttgcagtgactgcaagcgagcgacggaggtggtgtttgaccgctccgctggtgatgcaatctgttcggagtgtggtctcgtcttggaatcacac 263  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609411 cgcattttgcagtgactgcaagcgagcgacggaggtggtgtttgaccgctccgctggtgatgcaatctgttcggagtgtggtctcgtcttggaatcacac 13609510  T
Q  264 tccattgatgaaacctccgaatggcgaacctttgctaacgaatccggcaataatgatgccgttcgtgtcggtggtcccaataaccctctcctcaccgatg 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13609511 tccattgatgaaacctccgaatggcgaacctttgctaacgaatccggcaataatgatgccgttcgtgtcggtggtcccaataaccctctcctcaacgatg 13609610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 68 - 357
Target Start/End: Original strand, 14149906 - 14150201
Alignment:
Q  68 agagcaatatataacatagtttattctcttgttctttgagcaaaaaac-----tcattttcttcttgaaaccctagagaga-aaactcggaaccatgtcc 161  Q
    |||||| |||||| ||||||| ||||||||||||||| |||||||||      |||||||||||||||||||  ||||| | |||||| |||||||||||    
T  14149906 agagcattatatagcatagttcattctcttgttctttcagcaaaaaaaaaaaatcattttcttcttgaaacctaagagacagaaactcagaaccatgtcc 14150005  T
Q  162 gacgcgttttgcagtgactgcaagcgagcgacggaggtggtgtttgaccgctccgctggtgatgcaatctgttcggagtgtggtctcgtcttggaatcac 261  Q
    || ||||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||  ||||| ||||||| ||||||||||| ||||||| ||| |    
T  14150006 gatgcgttttgcagcgactgcaagcgagcgacggatgtggtgtttgaccactccgccggcaatgcagtctgttcagagtgtggtcttgtcttgggatctc 14150105  T
Q  262 actccattgatgaaacctccgaatggcgaacctttgctaacgaatccggcaataatgatgccgttcgtgtcggtggtcccaataaccctctcctca 357  Q
    ||||||| |||||||||||||| | || |||||||||||||||||| | ||||||  ||   ||||||||||||||||||| ||||||||||||||    
T  14150106 actccatcgatgaaacctccgagttgctaacctttgctaacgaatctgtcaataaccatcatgttcgtgtcggtggtcccagtaaccctctcctca 14150201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 72 - 318
Target Start/End: Original strand, 14074406 - 14074637
Alignment:
Q  72 caatatataacatagtttattctcttgttctttgagcaaaaaactcattttcttcttgaaaccctagagagaaaactcggaaccatgtccgacgcgtttt 171  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||| ||||||||||              |||||| |||||||||||||  || |||||||    
T  14074406 caatatatagcatagttcattctcttgttctttcagcaaaaaagtcattttctt--------------gagaaa-ctcggaaccatgtttgatgcgtttt 14074490  T
Q  172 gcagtgactgcaagcgagcgacggaggtggtgtttgaccgctccgctggtgatgcaatctgttcggagtgtggtctcgtcttggaatcacactccattga 271  Q
    |||| |||||||| | ||||||||| ||||||||||||| |||||| ||  ||||| ||||||| ||||||||||| ||||||| ||| |||||||| ||    
T  14074491 gcagagactgcaaccaagcgacggatgtggtgtttgaccactccgccggcaatgcagtctgttcagagtgtggtcttgtcttgggatctcactccatcga 14074590  T
Q  272 tgaaacctccgaatggcgaacctttgctaacgaatccggcaataatg 318  Q
    |||||||||||| |||| ||||||  ||||||| | |||||||||||    
T  14074591 tgaaacctccgagtggcaaaccttctctaacgactacggcaataatg 14074637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9862584 - 9862538
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  9862584 agaaagttgtcacaaaagttgacaaaaaatggttgttcaaatatcat 9862538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10811186 - 10811140
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  10811186 agaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcat 10811140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19961983 - 19961937
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19961983 agaaagttgtcacaaaaattgtctaaaagtggttgttcaaatatcat 19961937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34456841 - 34456795
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34456841 agaaagttatcacaaaagttgtcaaaaagtggttattcaaatatcat 34456795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 32362982 - 32362938
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||    
T  32362982 aaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcat 32362938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26014862 - 26014817
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  26014862 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 26014817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32457776 - 32457821
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  32457776 agaaagttgtcacaaa-gttgtcaaaaagtggttgtacaaatatcat 32457821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33389059 - 33389013
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  33389059 agaaagttgtcacaaaaattgtttaaaagtggttgttcaaatatcat 33389013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42357101 - 42357146
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  42357101 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 42357146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46623957 - 46623912
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  46623957 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 46623912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47472379 - 47472334
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  47472379 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 47472334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52939703 - 52939658
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  52939703 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 52939658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55400050 - 55400004
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  55400050 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 55400004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41637300 - 41637345
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatca 46  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||    
T  41637300 agaaagttgtcacaaaagttgtcaaaaaatagttgtacaaatatca 41637345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48346877 - 48346833
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    |||||||||||||||| ||||||||||| || |||||||||||||    
T  48346877 agaaagttgtcacaaacgttgtcaaaaaatgattgttcaaatatc 48346833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 32146009 - 32146052
Alignment:
Q  4 aagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  32146009 aagttatcacaaaagttgtcaaaaaatagttgttcaaatatcat 32146052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42889036 - 42888993
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||    
T  42889036 agaaagttgtcacaaaaattgtcaaaaaatggttgttcgaatat 42888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 288776 - 288730
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  288776 agaaagttgtcacaaaagttataaaaaaattgttgttcaaatatcat 288730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5244279 - 5244234
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||    
T  5244279 agaaagttgtcacaaaagttgt-aaaatatggttgttcaaatatcat 5244234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14207278 - 14207324
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| | ||||||||||||||||    
T  14207278 agaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcat 14207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14215026 - 14215072
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| | ||||||||||||||||    
T  14215026 agaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcat 14215072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16129572 - 16129527
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  16129572 agaaagttatcacaaaagttgtaaaaaa-tggttgttcaaatatcat 16129527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16969587 - 16969632
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||    
T  16969587 agaaagttgtcaaaaaagttgtcaaaaa-tggttgttaaaatatcat 16969632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19150339 - 19150385
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||| ||||||||||    
T  19150339 agaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcat 19150385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21196175 - 21196129
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||||||    
T  21196175 agaaagttgtcacagaagttgtcacaaaatggatgttcaaatatcat 21196129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22813122 - 22813077
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  22813122 agaaagttgtca-aaaagttgtcagaaagtggttgtacaaatatcat 22813077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 23553613 - 23553655
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||  |||||| ||||||||||||||||    
T  23553613 agttgtcacaaaagttgtttaaaagtagttgttcaaatatcat 23553655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25188485 - 25188531
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||  |||||||||||||||| | ||||||||||||||||    
T  25188485 agaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcat 25188531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26279934 - 26279889
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  26279934 agaaagttgtca-aaaagttgtcagaaagtggttgtacaaatatcat 26279889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27168702 - 27168748
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || | ||||| ||||||||||||||||||    
T  27168702 agaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcat 27168748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29573376 - 29573422
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  29573376 agaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcat 29573422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31376785 - 31376831
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  31376785 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 31376831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31931039 - 31931085
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  31931039 agaaaattgtcacaaaagttgttaaaaaatggatgttcaaatatcat 31931085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34057973 - 34058019
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||||    
T  34057973 agaaagttgtcacaaaagttatcataaaatggatgttcaaatatcat 34058019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34733312 - 34733357
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  34733312 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 34733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37302596 - 37302551
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||    
T  37302596 agaaagttgtcacaaaagttgt-aaaaaatggttgttaaaatatcat 37302551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37894263 - 37894309
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  37894263 agaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcat 37894309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37927225 - 37927271
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||  || ||| ||||||||||||||    
T  37927225 agaaagttgtcacaaaagttgtcaccaaatggatgttcaaatatcat 37927271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38926678 - 38926633
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  38926678 agaaagttgtcacaaacgttgtaaaaaa-tggttgttcaaatatcat 38926633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41308975 - 41308930
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||    
T  41308975 agaaagttgtcacaaaagttataaaaaa-tggttgttcaaatatcat 41308930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41443211 - 41443257
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| || |||||||||||||||||||||| | |||||||||||||    
T  41443211 agaaaattatcacaaaagttgtcaaaaagtgatcgttcaaatatcat 41443257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45055025 - 45054979
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  45055025 agaaagttgtaacaaaagttgtcagaaaatggatgttcaaatatcat 45054979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47101573 - 47101527
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||| |||||||||||||| ||| ||||||| ||||||||||    
T  47101573 agaaagttgccacaaaagttgtcacaaaatggttgtacaaatatcat 47101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48353047 - 48353001
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||| ||| ||||||||||    
T  48353047 agaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatcat 48353001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48405461 - 48405415
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||||||| ||||||||||    
T  48405461 agaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcat 48405415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49167801 - 49167755
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||  || ||| ||||||||||||||    
T  49167801 agaaagttgtcacaaaagttgtcatcaaatggatgttcaaatatcat 49167755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49417626 - 49417580
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| | | ||||||||||||||    
T  49417626 agaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcat 49417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 50559232 - 50559278
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||| | ||||| ||||||||||    
T  50559232 agaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcat 50559278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52326069 - 52326024
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  52326069 agaaagttgtcacaaaagttgt-aaaaaatggttattcaaatatcat 52326024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11173508 - 11173464
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatca 46  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  11173508 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatca 11173464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 37143167 - 37143126
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  37143167 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 37143126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 6093901 - 6093941
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaata 43  Q
    |||||||||||||||||||||||| | ||||||| ||||||    
T  6093901 aaagttgtcacaaaagttgtcaaatattggttgtacaaata 6093941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 28700509 - 28700477
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||| ||||||||||||||||||    
T  28700509 aaagttgtcaaaaaatggttgttcaaatatcat 28700477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 31425579 - 31425539
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||| ||| ||||||||||||||    
T  31425579 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 31425539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 36671037 - 36671080
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  36671037 aaagttgtcacaaaaattgtaaaaaa-tggttgttcaaatatcat 36671080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 51464295 - 51464338
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||    
T  51464295 aaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 51464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 52963342 - 52963382
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||| ||||||| ||||||||||    
T  52963342 ttgtcacaaaagttgttaaaaaatggttgtacaaatatcat 52963382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 9e-89; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 120 - 368
Target Start/End: Complemental strand, 36014592 - 36014341
Alignment:
Q  120 tttcttcttgaaaccctagagaga---aaactcggaaccatgtccgacgcgttttgcagtgactgcaagcgagcgacggaggtggtgtttgaccgctccg 216  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  36014592 tttcttcttgaaaccctagagagagaaaaactcggaaccatgtccgatgcgttttgcagcgactgcaagcgagcgacggaggtggtgttcgaccactccg 36014493  T
Q  217 ctggtgatgcaatctgttcggagtgtggtctcgtcttggaatcacactccattgatgaaacctccgaatggcgaacctttgctaacgaatccggcaataa 316  Q
    | || |||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||  ||||    
T  36014492 ccggcgatgcagtctgttcggagtgtggtctcgtcttggaatctcactccatcgatgaaacctccgagtggcgaaccttcgccaacgaatccggtgataa 36014393  T
Q  317 tgatgccgttcgtgtcggtggtcccaataaccctctcctcaccgatggtggt 368  Q
     ||| ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  36014392 cgatcccgttcgtgtcggtggtcccagtaaccctctccttaccgatggtggt 36014341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2008878 - 2008924
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2008878 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 2008924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12007206 - 12007252
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12007206 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 12007252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33845093 - 33845047
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  33845093 agaaagttgtcacaaaagttgtcaaaaagtggttattcaaatatcat 33845047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47448877 - 47448831
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  47448877 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 47448831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43081910 - 43081953
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  43081910 agaaagttgtcataaaagttgtcaaaaagtggttgttcaaatat 43081953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13152643 - 13152598
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13152643 agaaagttgtcacaaaagttgtcaaaaa-tggttgttcaaatatcat 13152598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31445368 - 31445326
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaata 43  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  31445368 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaata 31445326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32777727 - 32777773
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  32777727 agaaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcat 32777773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34978347 - 34978301
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34978347 agaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcat 34978301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15325658 - 15325704
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcata 48  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  15325658 agaaagttgtcacaaaagttgtcaaaaa-tgattgttcaaatatcata 15325704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9792817 - 9792771
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||    
T  9792817 agaaagttatcacaaaagttgtttaaaagtggttgttcaaatatcat 9792771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30941436 - 30941391
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  30941436 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 30941391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38259114 - 38259068
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  38259114 agaaagttgtcacaaaagttatcaaaaaatggttgtacaaatatcat 38259068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41018714 - 41018668
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||    
T  41018714 agaaagttgtcacaaaagttgtccaaaaatagttgttcaaatatcat 41018668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41893966 - 41893920
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  41893966 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 41893920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43159595 - 43159641
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  43159595 agaaagttgtcacaaaaattgttaaaaaatggttgttcaaatatcat 43159641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44895593 - 44895638
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  44895593 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 44895638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49069300 - 49069254
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||    
T  49069300 agaaaattatcacaaaagttgtcaaaaagtggttgtacaaatatcat 49069254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 10700207 - 10700252
Alignment:
Q  2 gaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  10700207 gaaagttgttacaaaagttatcaaaaagtggttgtgcaaatatcat 10700252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 27568066 - 27568025
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    |||||||||||||||||||||||||||| ||||| |||||||    
T  27568066 aaagttgtcacaaaagttgtcaaaaagttgttgtgcaaatat 27568025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 23910277 - 23910317
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  23910277 ttgtcacaaaagttgtcaaaaaatggttgtacaaatatcat 23910317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 37899372 - 37899328
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  37899372 aaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcat 37899328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 44649349 - 44649392
Alignment:
Q  4 aagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||    
T  44649349 aagttgtcataaaaattgtcaaaaattggttgttcaaatatcat 44649392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22195150 - 22195196
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||||||||||||||   ||||||||||||||||    
T  22195150 agaaagttatcacaaaagttgtcaaaaatcagttgttcaaatatcat 22195196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22623439 - 22623393
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| ||||| |||||||| ||||||| ||||||||||||||||||    
T  22623439 agaaaattgtcgcaaaagttatcaaaaaatggttgttcaaatatcat 22623393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25192905 - 25192950
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  25192905 agaaagttgttacaaaagttgt-aaaaaatggttgttcaaatatcat 25192950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28824553 - 28824508
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  28824553 agaaagttgtca-aaaagttgtcagaaagtggttgtacaaatatcat 28824508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33057430 - 33057384
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||| ||||| | ||||||||||||||||    
T  33057430 agaaagttgttacaaaagttgttaaaaaatagttgttcaaatatcat 33057384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33578335 - 33578373
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttca 39  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  33578335 agaaagttgtcataaaagttgtcaaaaaatggttgttca 33578373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35098724 - 35098769
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||    
T  35098724 agaaagttgtcacata-gttgtcaaaaaatggttgttcaaatatcat 35098769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35586793 - 35586839
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||||    
T  35586793 agaaagttgtcacaaaagttatcataaaatggatgttcaaatatcat 35586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37899233 - 37899279
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  37899233 agaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcat 37899279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38861146 - 38861101
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||    
T  38861146 agaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatcat 38861101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48062107 - 48062061
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||| ||||| || |||||||||||||||    
T  48062107 agaaagttgttacaaaagttgtaaaaaaatgattgttcaaatatcat 48062061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 48395287 - 48395253
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  48395287 caaaagttgtcaaaaagtggttgtacaaatatcat 48395253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 28109995 - 28109962
Alignment:
Q  14 aaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||| ||||||||||    
T  28109995 aaaagttgtcaaaaagtggttgtacaaatatcat 28109962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 37352152 - 37352115
Alignment:
Q  10 tcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  37352152 tcacaaaaattgtcaaaaaatggttgttcaaatatcat 37352115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40417824 - 40417783
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    ||||||||||||||| |||||||||| | |||||||||||||    
T  40417824 aaagttgtcacaaaaattgtcaaaaaatagttgttcaaatat 40417783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1471311 - 1471355
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||    
T  1471311 agaaagttgtcacaaaagttgttacaaaatggttgtacaaatatc 1471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 2362712 - 2362669
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||    
T  2362712 aaagttgtcacaaaagttgt-aaaaaatggttgttcatatatcat 2362669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1068657 - 1068611
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1068657 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 1068611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2730981 - 2731027
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  2730981 agaaagttgttacaaaagttgtcaaaaagtggttgttcaaatatcat 2731027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26026947 - 26026901
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  26026947 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 26026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33107887 - 33107933
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  33107887 agaaagttgtcataaaagttgtcaaaaagtggttgttcaaatatcat 33107933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34435757 - 34435803
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34435757 agaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 34435803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7598759 - 7598713
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  7598759 agaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcat 7598713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44061768 - 44061722
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  44061768 agaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcat 44061722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 5601013 - 5601053
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  5601013 ttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 5601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 5639607 - 5639567
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  5639607 ttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 5639567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 25987809 - 25987853
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  25987809 aaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcat 25987853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33451583 - 33451627
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  33451583 agaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatc 33451627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 10839505 - 10839548
Alignment:
Q  4 aagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  10839505 aagttgtcacaaaagttgttaaaaattggttgttcaaatatcat 10839548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3946291 - 3946245
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  3946291 agaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcat 3946245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 5771996 - 5772038
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  5771996 agttgttacaaaagttgtcaaaaaatggttgttcaaatatcat 5772038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12284290 - 12284336
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||    
T  12284290 agaaagttgtcacaaacgttgtccaaaaatggttgttcaaatatcat 12284336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13106528 - 13106482
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||    
T  13106528 agaaagttgtcaaaaaagttgtccaaaaatggttgttcaaatatcat 13106482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23754727 - 23754773
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||    
T  23754727 agaaagttgtcacaaaagttattaaaaaatggttgttcaaatatcat 23754773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27325808 - 27325763
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  27325808 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 27325763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28772144 - 28772190
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||    
T  28772144 agaaagttatcacaaaaattgtcaaaaaatggttgttcaaatatcat 28772190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33100489 - 33100535
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||    
T  33100489 agaaagttgtcacaaaagttgttataaaatggttgttcaaatatcat 33100535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 3547182 - 3547226
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||    
T  3547182 aaagttgtgacaaaagttatcaaaaagtggttgtacaaatatcat 3547226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 4658285 - 4658329
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  4658285 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 4658329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 15716998 - 15717042
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||| |||||||||| || ||||||||||||    
T  15716998 aaagttgtcacaaaagttatcaaaaagtgattattcaaatatcat 15717042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 7612231 - 7612270
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  7612231 agttatcacaaaagttgtctaaaagtggttgttcaaatat 7612270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 67181 - 67227
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  67181 agaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcat 67227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 4672040 - 4671998
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    ||||||||  |||||||||||||||| ||||||||||||||||    
T  4672040 aaagttgttgcaaaagttgtcaaaaaatggttgttcaaatatc 4671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 5771900 - 5771942
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||    
T  5771900 agttgttacaaaagttgtcacaaaatggttgttcaaatatcat 5771942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7678782 - 7678737
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  7678782 agaaaattgtcacaaa-gttgtcaaaaagtggttgtacaaatatcat 7678737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9549219 - 9549265
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||| ||| ||| ||||||||||||||    
T  9549219 agaaaattgtcacaaaagttgtcacaaaatggatgttcaaatatcat 9549265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10644822 - 10644868
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  10644822 agaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcat 10644868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12707200 - 12707154
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||| |||||||||||| ||| ||| ||||||||||||||    
T  12707200 agaaagttgtcgcaaaagttgtcataaaatggatgttcaaatatcat 12707154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14707364 - 14707410
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  14707364 agaaagttatcacaaaagttgtcaaaaaatgaatgttcaaatatcat 14707410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20284839 - 20284885
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||| |||||||||||||||||||  || ||||||||||||||||||    
T  20284839 agaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcat 20284885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21071468 - 21071514
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||| |||||||||||||||||||  || ||||||||||||||||||    
T  21071468 agaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcat 21071514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22719490 - 22719445
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  22719490 agaaaattgtcacaaaagttgtaaaaaa-tggttgttcaaatatcat 22719445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24479286 - 24479241
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  24479286 agaaaattgtcacaaaagttatcaaaaa-tggttgttcaaatatcat 24479241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25830266 - 25830312
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  25830266 agaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcat 25830312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 26629142 - 26629176
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  26629142 caaaagttgtcaaaaagtggttgtacaaatatcat 26629176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29991463 - 29991417
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  29991463 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 29991417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 30170761 - 30170795
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  30170761 caaaagttgtcaaaaagtggttgtacaaatatcat 30170795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34718166 - 34718120
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  34718166 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 34718120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35067211 - 35067165
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| || || ||||||| ||||||||||    
T  35067211 agaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcat 35067165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40102073 - 40102028
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  40102073 agaaagttgtca-aaaagttgtgaaaaagtggttgtacaaatatcat 40102028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40528799 - 40528753
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||| | ||||||||||||||||    
T  40528799 agaaagttgtcataaaagttgtcacaaaatagttgttcaaatatcat 40528753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41600360 - 41600314
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||| || ||  ||||||||||||||    
T  41600360 agaaagttgtcacaaaagttgtcaataaatgaatgttcaaatatcat 41600314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43397831 - 43397786
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  43397831 agaaagttgtaacaaaagttgtaaaaaa-tggttgttcaaatatcat 43397786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45101446 - 45101401
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  45101446 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 45101401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 5740807 - 5740840
Alignment:
Q  14 aaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||| ||||||||||    
T  5740807 aaaagttgtcaaaaagtggttgtacaaatatcat 5740840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 5849595 - 5849632
Alignment:
Q  10 tcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  5849595 tcacaaaagttatcaaaaaatggttgttcaaatatcat 5849632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 895971 - 895939
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||    
T  895971 aaagttgtcaaaaagtggttgtacaaatatcat 895939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 9047093 - 9047125
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||    
T  9047093 aaagttgtcaaaaagtggttgtacaaatatcat 9047125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23793110 - 23793158
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcataa 49  Q
    |||| ||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  23793110 agaatgttgtcacataagttgtcacaaaatggatgttcaaatatcataa 23793158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 31249551 - 31249590
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  31249551 ttgtcacaaaagttgtaaaaaa-tggttgttcaaatatcat 31249590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 33279571 - 33279615
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| || || ||||||| ||||||||||    
T  33279571 aaagttgtcacaaaagttgttaagaaatggttgtacaaatatcat 33279615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37449448 - 37449491
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||    
T  37449448 aaagttgtcacaaaagttgt-aaaaaatggttgttgaaatatcat 37449491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 37792189 - 37792229
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||| || || |||||||||||||||||||||||    
T  37792189 ttgtcacaaaaattatctaaaagtggttgttcaaatatcat 37792229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 39211090 - 39211058
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||| ||||||||||||||||||    
T  39211090 aaagttgtcaaaaaatggttgttcaaatatcat 39211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33712371 - 33712325
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33712371 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 33712325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24900826 - 24900780
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  24900826 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 24900780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 18065112 - 18065156
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  18065112 aaagttgtcacaaaagttgtcaaaaagtgattgttcaaatatcat 18065156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5080588 - 5080633
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  5080588 agaaagttgtcacaaaagttgt-aaaaagtggttgttcaaatatcat 5080633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8505794 - 8505840
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  8505794 agaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcat 8505840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8645359 - 8645314
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  8645359 agaaagttgtcacaaaagttgtcaaaaagt-gttgttcaaatatcat 8645314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11635555 - 11635601
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  11635555 agaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcat 11635601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17551399 - 17551445
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  17551399 agaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcat 17551445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 31883326 - 31883370
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  31883326 aaagttgttacaaaagttgtcaaaaagtggttgtacaaatatcat 31883370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2242042 - 2242088
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||    
T  2242042 agaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcat 2242088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8098616 - 8098661
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8098616 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 8098661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20822888 - 20822934
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  20822888 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 20822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22079584 - 22079629
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  22079584 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 22079629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23632657 - 23632703
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||    
T  23632657 agaaaggtgtcacaaaagttgtttaaaagtggttgttcaaatatcat 23632703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25811859 - 25811904
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  25811859 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 25811904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32459537 - 32459583
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  32459537 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 32459583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34047437 - 34047392
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  34047437 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 34047392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5739784 - 5739829
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatca 46  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||    
T  5739784 agaaagttgtcacaaaagttgttaaaaaatagttgttcaaatatca 5739829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14910222 - 14910182
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  14910222 ttgtcacaaaagttgtcaaaaagtgtttgttcaaatgtcat 14910182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 13093665 - 13093631
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  13093665 caaaagttgtcaaaaagtggttgtacaaatatcat 13093631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15318208 - 15318254
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  15318208 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 15318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21506386 - 21506341
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  21506386 agaaagttgtca-aaaagttgtcaaaaaatggttgtacaaatatcat 21506341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 28982663 - 28982705
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||    
T  28982663 agttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 28982705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29383607 - 29383562
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  29383607 agaaagttgtca-aaaagttgtcagaaagtggttgtacaaatatcat 29383562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33421811 - 33421765
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  33421811 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 33421765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 31517202 - 31517235
Alignment:
Q  14 aaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||| ||||||||||    
T  31517202 aaaagttgtcaaaaagtggttgtacaaatatcat 31517235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4820450 - 4820410
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaa 41  Q
    ||||| |||||||||||||||||||||| || |||||||||    
T  4820450 agaaaattgtcacaaaagttgtcaaaaaatgattgttcaaa 4820410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 35077172 - 35077128
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| | ||||||||||||||| | ||||||||||||||||    
T  35077172 aaagttgttataaaagttgtcaaaaaattgttgttcaaatatcat 35077128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5932784 - 5932830
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5932784 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 5932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32012947 - 32012901
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  32012947 agaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcat 32012901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51255797 - 51255751
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  51255797 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 51255751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37060368 - 37060326
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaata 43  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  37060368 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaata 37060326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38519844 - 38519798
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  38519844 agaaagttgtcacaaaaattgtcaaaaaatggttgttcaaatatcat 38519798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 50721765 - 50721811
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  50721765 agaaagttatcacaaaagttgtcaaaaattggttgttcaaatatcat 50721811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51734653 - 51734699
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  51734653 agaaagttgtcacaaaagttgtttaaaagtggttgttcaaatatcat 51734699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 36130375 - 36130412
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaa 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36130375 aaagttgtcacaaaagttgtcaaaaagtggttgttcaa 36130412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 50831777 - 50831822
Alignment:
Q  2 gaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  50831777 gaaagttgttacaaaagttgtcaaaaagtggttgtacaaatatcat 50831822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51577665 - 51577622
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  51577665 agaaagttgtcacaaaagttatcaaaaagtgattgttcaaatat 51577622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 149505 - 149551
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||    
T  149505 agaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcat 149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5622508 - 5622463
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5622508 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 5622463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14443249 - 14443203
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||| || |||||||||||||||    
T  14443249 agaaaattgtcacaaaagttgtcaaaaaatgattgttcaaatatcat 14443203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23369353 - 23369398
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  23369353 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 23369398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29227263 - 29227309
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||    
T  29227263 agaaagttatcacaaaaattatcaaaaagtggttgttcaaatatcat 29227309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37997306 - 37997261
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  37997306 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 37997261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54000749 - 54000703
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||    
T  54000749 agaaagttgttataaaaattgtcaaaaagtggttgttcaaatatcat 54000703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 21014100 - 21014059
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  21014100 gttgtcacaaaagttgtcaaaaaatgattgttcaaatatcat 21014059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 44925163 - 44925196
Alignment:
Q  14 aaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||||||||||||    
T  44925163 aaaagttgtcaaaaagtggttgttcaaatatcat 44925196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 2401659 - 2401615
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  2401659 aaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcat 2401615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2004209 - 2004255
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||  |||||||||| ||||| ||||||||||||||||||    
T  2004209 agaaagttgttgcaaaagttgttaaaaaatggttgttcaaatatcat 2004255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2268528 - 2268573
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  2268528 agaaagttgtcacaaaagttgttaaaaa-tggatgttcaaatatcat 2268573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2738288 - 2738334
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||| |||||||||| || |||||||||||||||    
T  2738288 agaaagttatcacaaaaattgtcaaaaaatgattgttcaaatatcat 2738334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4896521 - 4896566
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  4896521 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 4896566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7632482 - 7632528
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| || ||||||||||||||||||| || |||||||||||||||    
T  7632482 agaaaattatcacaaaagttgtcaaaaattgattgttcaaatatcat 7632528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9362698 - 9362744
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||  || ||| ||||||||||||||    
T  9362698 agaaagttgtcacaaaagttgtcattaaatggatgttcaaatatcat 9362744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10250536 - 10250581
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  10250536 agaaagttgtcacaaaagttgt-aaaaaatagttgttcaaatatcat 10250581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37297099 - 37297054
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  37297099 agaaaattgtcacaaaagttgtaaaaaa-tggttgttcaaatatcat 37297054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38134403 - 38134358
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  38134403 agaaagttgtcacaaaaattgtaaaaaa-tggttgttcaaatatcat 38134358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39158156 - 39158110
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || ||||||| || |||||||||||||||    
T  39158156 agaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcat 39158110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42916701 - 42916655
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||| |||||||||||| | ||| ||||||||||||||||||    
T  42916701 agaaagttgacacaaaagttgttataaaatggttgttcaaatatcat 42916655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43175034 - 43174989
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  43175034 agaaagttatcacaaaagttgtaaaaaa-tggttgttcaaatatcat 43174989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45083031 - 45082986
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||    
T  45083031 agaaaattatcacaaaagttgtcaaaaa-tggttgttcaaatatcat 45082986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 46794522 - 46794567
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  46794522 agaaagttgtca-aaaagttgtcagaaagtggttgtacaaatatcat 46794567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 50890094 - 50890139
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||    
T  50890094 agaaagttgtcacaaaagttgtcaaaaa-tagttgtacaaatatcat 50890139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 56215644 - 56215610
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  56215644 caaaagttgtcaaaaagtggttgtacaaatatcat 56215610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 56557784 - 56557738
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||| ||| | ||||||||||||||||    
T  56557784 agaaaattgtcacaaaagttgtcataaaattgttgttcaaatatcat 56557738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 5386421 - 5386389
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||| ||||||||||||||||||    
T  5386421 aaagttgtcaaaaaatggttgttcaaatatcat 5386389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 18938402 - 18938442
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| ||||||||||| ||| ||||||||||||||||||    
T  18938402 ttgtcataaaagttgtcataaaatggttgttcaaatatcat 18938442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 26732273 - 26732230
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||    
T  26732273 aaagttgtcactaaagttgtgaaaaa-tggttgttcaaatatcat 26732230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 42490957 - 42490925
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||    
T  42490957 aaagttgtcaaaaagtggttgtacaaatatcat 42490925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 46634148 - 46634105
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| || |||||||||||||||    
T  46634148 aaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatcat 46634105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 48494935 - 48494967
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||||||||||||||    
T  48494935 aaagttgttaaaaagtggttgttcaaatatcat 48494967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 56271409 - 56271365
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||    
T  56271409 aaagttgtcacaaaagttatcataaaatggatgttcaaatatcat 56271365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27742668 - 27742622
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27742668 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 27742622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48858874 - 48858828
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48858874 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 48858828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9566981 - 9567027
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  9566981 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 9567027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9988002 - 9987956
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  9988002 agaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcat 9987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19947761 - 19947807
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19947761 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 19947807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24806242 - 24806288
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  24806242 agaaagttgtcacaaaagttgtcaaaaagtggttattcaaatatcat 24806288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48983688 - 48983734
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  48983688 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 48983734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17082763 - 17082806
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  17082763 agaaagttgtcacaaaagttgtcaaaaagtagttgttcaaatat 17082806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 649819 - 649773
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  649819 agaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcat 649773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4213123 - 4213077
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  4213123 agaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcat 4213077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47642627 - 47642673
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  47642627 agaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcat 47642673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5771768 - 5771814
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||    
T  5771768 agaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcat 5771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8350217 - 8350262
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8350217 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 8350262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10890066 - 10890112
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  10890066 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 10890112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11947846 - 11947800
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  11947846 agaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcat 11947800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13489713 - 13489667
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  13489713 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 13489667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15083071 - 15083116
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  15083071 agaaaattgtcacaaaagttgtcaaaaa-tggttgttcaaatatcat 15083116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15705082 - 15705128
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  15705082 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 15705128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30467546 - 30467592
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||    
T  30467546 agaaagttgtcacaaaagttgtcaaaaaatgactgttcaaatatcat 30467592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37685381 - 37685336
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  37685381 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 37685336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37700137 - 37700182
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  37700137 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 37700182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40439860 - 40439906
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  40439860 agaaagttgtcataaaagttgtcaaaaaatggttgttcaagtatcat 40439906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 50148991 - 50148953
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  50148991 ttgtcacaaaagttgtcaaaaattggttgttcaaatatc 50148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52362533 - 52362487
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  52362533 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 52362487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 48261185 - 48261144
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  48261185 gttgtcacaaaagttgtcaaaaagtggttgtacgaatatcat 48261144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 3159424 - 3159381
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  3159424 aaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 3159381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 9897584 - 9897628
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||    
T  9897584 aaagttgtcacaaaagttgtcaaaaaatggttctacaaatatcat 9897628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 30735316 - 30735359
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  30735316 aaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 30735359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31827001 - 31826957
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||    
T  31827001 agaaagttgtcacaaaaattgtaaaaaaatggttgttcaaatatc 31826957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 35529402 - 35529446
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||    
T  35529402 aaagttgtcacaaaagttgtctaaaatcggttgttcaaatatcat 35529446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 2571682 - 2571640
Alignment:
Q  4 aagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  2571682 aagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 2571640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3982052 - 3982097
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||    
T  3982052 agaaagttgtcacaaaagttgt-aaaaaaaggttgttcaaatatcat 3982097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7919082 - 7919128
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||| |||||| ||||||| || |||||||||||||||    
T  7919082 agaaagttgtcacgaaagttatcaaaaattgattgttcaaatatcat 7919128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12798598 - 12798552
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||| |||||||||||||||| | |||||||||||||    
T  12798598 agaaaattgtcacataagttgtcaaaaagtgatagttcaaatatcat 12798552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16583081 - 16583127
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| |  ||||||| |||||||||||||||    
T  16583081 agaaagttgtcacaaaagttatttaaaagtgattgttcaaatatcat 16583127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18434845 - 18434800
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||    
T  18434845 agaaagttgtcacaaaagttgtcaaaaa-tggttgtttatatatcat 18434800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21433421 - 21433467
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  21433421 agaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcat 21433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27465078 - 27465123
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||    
T  27465078 agaaagttgtcacaaaagttgt-aaaaaatggttgtttaaatatcat 27465123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32915092 - 32915138
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| | | ||||||||||||||    
T  32915092 agaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcat 32915138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33100858 - 33100813
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  33100858 agaaagttgtcaaaaaagttgtaaaaaa-tggttgttcaaatatcat 33100813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34008231 - 34008185
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| | | ||||||||||||||    
T  34008231 agaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcat 34008185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35369750 - 35369705
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||    
T  35369750 agaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatcat 35369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37619594 - 37619549
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  37619594 agaaagttgtcacaaaagttatcaaaaa-tggttgtccaaatatcat 37619549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37843453 - 37843498
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  37843453 agaaagttgtcacaaa-gttgtcaaaaagtagttgtacaaatatcat 37843498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44519172 - 44519217
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||    
T  44519172 agaaagttgtcataaaagttgtcaaaaa-tggttgttcatatatcat 44519217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44789163 - 44789209
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  44789163 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 44789209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45333620 - 45333575
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||    
T  45333620 agaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatcat 45333575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47214259 - 47214213
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| | | ||||||||||||||    
T  47214259 agaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcat 47214213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47820521 - 47820567
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  47820521 agaaagttgtaacaaaagttgtcataaaatggatgttcaaatatcat 47820567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49931604 - 49931558
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||| ||||||||||    
T  49931604 agaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcat 49931558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 50226900 - 50226945
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  50226900 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 50226945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 18982565 - 18982524
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  18982565 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 18982524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 4857959 - 4857927
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||||||||    
T  4857959 aaagttgtcaaaaagtgattgttcaaatatcat 4857927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 30570572 - 30570532
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||| || ||||||||||||||||||| ||||||    
T  30570572 ttgtcacaaaatttatcaaaaagtggttgttcaactatcat 30570532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 30658870 - 30658914
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  30658870 aaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 30658914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 36775152 - 36775112
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatca 46  Q
    ||||||||||||||||| ||||| ||| |||||||||||||    
T  36775152 gttgtcacaaaagttgttaaaaaatggatgttcaaatatca 36775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 45272183 - 45272215
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||    
T  45272183 aaagttgtcaaaaagtggttgtacaaatatcat 45272215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 45333397 - 45333361
Alignment:
Q  11 cacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  45333397 cacaaaagttatcaaaaagtggttgtacaaatatcat 45333361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 49020430 - 49020470
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||| ||||||| ||||||||||    
T  49020430 ttgtcacaaaagttgttaaaaaatggttgtacaaatatcat 49020470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 49065386 - 49065430
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||  |||||||||| | ||||||||||||||||    
T  49065386 aaagttgtcacaaatattgtcaaaaaatagttgttcaaatatcat 49065430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 51571452 - 51571420
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||    
T  51571452 aaagttgtcaaaaagtggttgtacaaatatcat 51571420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10987 - 10941
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  10987 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaattatcat 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28347 - 28393
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  28347 agaaagttgtcacaaaagttatcaaaaagtggttgttcaaatatcat 28393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13089802 - 13089848
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13089802 agaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 13089848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 611915 - 611869
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  611915 agaaagttgtcacaaaagttgtcaaaaagtaattgttcaaatatcat 611869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21156038 - 21155992
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  21156038 agaaaggtgtcacaaaagttgtcaaaaaatggttgttcaaatatcat 21155992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 1274406 - 1274363
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  1274406 aaagttgtcacaaaagttgtcaaaaa-tggttgttcaaatatcat 1274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1293106 - 1293152
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  1293106 agaaagttgtcacaaaagttgttaaaaaatggttgtacaaatatcat 1293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6517763 - 6517717
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  6517763 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 6517717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7287210 - 7287256
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||    
T  7287210 agaaagttgtcacaaaagttgtaaaaaaatggttgtttaaatatcat 7287256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8920129 - 8920083
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  8920129 agaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcat 8920083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10649486 - 10649440
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  10649486 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 10649440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17097822 - 17097868
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  17097822 agaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatcat 17097868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18660809 - 18660764
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  18660809 agaaaattgtcacaaaagttgtcaaaaa-tggttgttcaaatatcat 18660764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19522024 - 19522069
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19522024 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 19522069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29463044 - 29462998
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||    
T  29463044 agaaagttgtcacaaacgttgtcaaaaaattgttgttcaaatatcat 29462998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32872918 - 32872964
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||    
T  32872918 agaaaattgtcacaaaagttgtcaaaaaatagttgttcaaatatcat 32872964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39195768 - 39195722
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||    
T  39195768 agaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcat 39195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 4719696 - 4719655
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  4719696 gttgtcacaaaagttgtcaaaaattggttgtacaaatatcat 4719655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 21210867 - 21210835
Alignment:
Q  15 aaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||||||||    
T  21210867 aaagttgtcaaaaagtggttgttcaaatatcat 21210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 28306155 - 28306198
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  28306155 aaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 28306198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26791265 - 26791307
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  26791265 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatat 26791307  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 189723 - 189769
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||||    
T  189723 agaaagttgtcacaaaagttatcataaaatggatgttcaaatatcat 189769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8097300 - 8097254
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  8097300 agaaagttatcacaaaagttatcaaaaattggttgtacaaatatcat 8097254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 8728613 - 8728647
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  8728613 caaaagttgtcaaaaagtggttgtacaaatatcat 8728647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11148562 - 11148516
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||    
T  11148562 agaatgttgtcacaaaagttgtcaaaaattgattgtacaaatatcat 11148516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13309933 - 13309887
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||| |||||||||| | ||||||||||||||||    
T  13309933 agaaagttatcacaaaaattgtcaaaaaatagttgttcaaatatcat 13309887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 13739497 - 13739455
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||  ||||||||||||| ||||||||    
T  13739497 agttgtcacaaaagttgtctgaaagtggttgttcgaatatcat 13739455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14011368 - 14011322
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||    
T  14011368 agaaagttgtcacaaaagttgttacaaaatgattgttcaaatatcat 14011322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14321975 - 14322021
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  14321975 agaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcat 14322021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 16594400 - 16594442
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||    
T  16594400 agttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 16594442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16690550 - 16690504
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| || || ||||||| ||||||||||    
T  16690550 agaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcat 16690504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18695369 - 18695323
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  18695369 agaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcat 18695323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19481202 - 19481248
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||||    
T  19481202 agaaagttgtcacaaaagttatcataaaatggatgttcaaatatcat 19481248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21922165 - 21922211
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||||    
T  21922165 agaaagttgtcacaaacgttgtcacaaaatggatgttcaaatatcat 21922211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22098306 - 22098260
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  22098306 agaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcat 22098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24468306 - 24468352
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||||    
T  24468306 agaaagttatcacaaaagttgtttaaaaatggttgttcaaatatcat 24468352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30640841 - 30640795
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  30640841 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 30640795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33037570 - 33037525
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  33037570 agaaagttgtcataaaagttgtaaaaaa-tggttgttcaaatatcat 33037525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34381062 - 34381017
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  34381062 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 34381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35634857 - 35634902
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||    
T  35634857 agaaagttgtaacaaaagttgtcaaaaa-tgattgttcaaatatcat 35634902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39595322 - 39595277
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  39595322 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 39595277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 41621960 - 41621994
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  41621960 caaaagttgtcaaaaagtggttgtacaaatatcat 41621994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42446311 - 42446357
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||  |||||||||||||||| | ||||||||||||||||    
T  42446311 agaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcat 42446357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 43057474 - 43057440
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  43057474 caaaagttgtcaaaaagtggttgtacaaatatcat 43057440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24860072 - 24860031
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    ||||||||||||||| |||||||||| ||||||| |||||||    
T  24860072 aaagttgtcacaaaaattgtcaaaaaatggttgtacaaatat 24860031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 27487932 - 27487892
Alignment:
Q  7 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||||| || |||||||||||||||    
T  27487932 ttgtcacaaaagttgttaaaaattgattgttcaaatatcat 27487892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 27546112 - 27546068
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||| |||||| ||| || |||||||||||||||    
T  27546112 aaagttgtcacaaaatttgtcataaaatgattgttcaaatatcat 27546068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 31748385 - 31748341
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| | ||||| ||||||||||    
T  31748385 aaagttgtcacaaaagttgtaaaaaaatagttgtacaaatatcat 31748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 35075598 - 35075642
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||  |||||||||||| || |||||||||||||||    
T  35075598 aaagttgtcacatcagttgtcaaaaaatgattgttcaaatatcat 35075642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37316835 - 37316877
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaata 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37316835 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaata 37316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37731220 - 37731266
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  37731220 agaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 37731266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43057115 - 43057069
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  43057115 agaaagttgtcacaaaagttgttaaaaagtggttgttcaaatatcat 43057069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8848716 - 8848761
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8848716 agaaagttgtcacaaaagttgtcaaaaa-tggttgttcaaatatcat 8848761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11965844 - 11965798
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  11965844 agaaagctgtcacaaaagttgtcaaaaagtgattgttcaaatatcat 11965798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 15260354 - 15260312
Alignment:
Q  5 agttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  15260354 agttgtcacaaaagttgtctaaaagtggttgttcaaatatcat 15260312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27490751 - 27490796
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  27490751 agaaagttgtcacaaaagttgtcaaaaa-tggttgttcaaatatcat 27490796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 45376246 - 45376287
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  45376246 gttgtcacaaaagttgtcaaaaagtggttgtacaaatatcat 45376287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2563755 - 2563709
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  2563755 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 2563709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6999088 - 6999134
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  6999088 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 6999134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7502448 - 7502494
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  7502448 agaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcat 7502494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13765451 - 13765405
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  13765451 agaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcat 13765405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14871898 - 14871852
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||    
T  14871898 agaaagctgtcacaaaagttgtcaaaaaatggttgttcacatatcat 14871852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14877008 - 14876962
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||    
T  14877008 agaaagttgtcacaaaagttgtcaaaaaatagttgttcacatatcat 14876962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18254230 - 18254275
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  18254230 agaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcat 18254275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19916706 - 19916660
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||    
T  19916706 agaaagttgtcacaaaaattattaaaaagtggttgttcaaatatcat 19916660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22526014 - 22526060
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  22526014 agaaagttgtcacaaaaattgtcaaaaaatggatgttcaaatatcat 22526060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22888842 - 22888887
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  22888842 agaaagttgtcacaaaaattgtcaaaaa-tggttgttcaaatatcat 22888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23690530 - 23690576
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||||||||||||||| | ||||||||    
T  23690530 agaaagttgtcataaaagttgtcaaaaagtggttgtactaatatcat 23690576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31922313 - 31922359
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  31922313 agaaagttgtcacaaaaattgtcaaaaactggttgttcgaatatcat 31922359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38821417 - 38821371
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  38821417 agaaaattgtcacaaaagttgtcataaaatggttgttcaaatatcat 38821371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2144770 - 2144725
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatca 46  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||    
T  2144770 agaaagttatcacaaacgttgtcaaaaaatggttgttcaaatatca 2144725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 41042302 - 41042259
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  41042302 aaagttgtcacaaaagttgttaaaaa-tggttgttcaaatatcat 41042259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1352439 - 1352393
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||| ||| ||||||||||||||| || |||||||||||||||    
T  1352439 agaaagttttcataaaagttgtcaaaaattgattgttcaaatatcat 1352393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6170681 - 6170635
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||| ||| |||| |||||||||    
T  6170681 agaaagttgtcacaaaagttgtcataaaatggatgttgaaatatcat 6170635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6336303 - 6336257
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| | ||| ||||||| ||||||||||    
T  6336303 agaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcat 6336257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6511301 - 6511256
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  6511301 agaaagttgtcactaaagttgtaaaaaa-tggttgttcaaatatcat 6511256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8427603 - 8427557
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||||||| | | ||||||||||||||    
T  8427603 agaaagttgtcacaaaaattgtcaaaaaatagatgttcaaatatcat 8427557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9194480 - 9194434
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||||||    
T  9194480 agaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcat 9194434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9207640 - 9207595
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||    
T  9207640 agaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatcat 9207595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9990741 - 9990696
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  9990741 agaaagttgtcacaaaagttgt-aaaaattagttgttcaaatatcat 9990696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13711111 - 13711066
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  13711111 agaaagttgtcacaaa-gttatcaaaaagtggttgtacaaatatcat 13711066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14233739 - 14233785
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| |||||||||||||||||| ||| ||| ||||||||||||||    
T  14233739 agaaatttgtcacaaaagttgtcacaaaatggatgttcaaatatcat 14233785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15269912 - 15269866
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  15269912 agaaagttgtcacaaaaattgtcataaaatggatgttcaaatatcat 15269866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17388616 - 17388661
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||    
T  17388616 agaaagttgtcacaaaagttg-caaaaaatgattgttcaaatatcat 17388661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 24727622 - 24727656
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  24727622 caaaagttgtcaaaaagtggttgtacaaatatcat 24727656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 25507294 - 25507260
Alignment:
Q  13 caaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||| ||||||||||    
T  25507294 caaaagttgtcaaaaagtggttgtacaaatatcat 25507260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29349556 - 29349511
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||    
T  29349556 agaaagttgtcacaaaagtgatcaaaaa-tggttgttcaaatatcat 29349511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30977940 - 30977894
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||||||    
T  30977940 agaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcat 30977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36587489 - 36587534
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||    
T  36587489 agaaagttgtcaaaaaa-ttgtcaaaaaatggttgttcaaatatcat 36587534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39449137 - 39449183
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||||    
T  39449137 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcat 39449183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40504275 - 40504229
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||| ||||||||| |||||||| ||| ||||||||||||||||||    
T  40504275 agaaatttgtcacaacagttgtcataaaatggttgttcaaatatcat 40504229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 9979142 - 9979101
Alignment:
Q  6 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  9979142 gttgtcacaaaaattgtgaaaaagtggttgtacaaatatcat 9979101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 18510725 - 18510680
Alignment:
Q  2 gaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||  |||||||||||||||| | ||||||||||||||||    
T  18510725 gaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcat 18510680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 32750047 - 32750003
Alignment:
Q  2 gaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  32750047 gaaagttgtca-aaaagttgtgaaaaagtggttgtacaaatatcat 32750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 38911952 - 38912001
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcataataa 52  Q
    |||||||||||||||  | ||||||| |||||||||||||||||| ||||    
T  38911952 aaagttgtcacaaaaaatatcaaaaaatggttgttcaaatatcattataa 38912001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2076619 - 2076576
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||    
T  2076619 agaaagttatcacaaaagttgt-aaaaaatggttgttcaaatatc 2076576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 24766201 - 24766157
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||| | ||||| ||||||| ||||||||||    
T  24766201 aaagttgtcacaaaagttattaaaaaatggttgtacaaatatcat 24766157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 30831803 - 30831764
Alignment:
Q  4 aagttgtcacaaaagttgtcaaaaagtggttgttcaaatat 44  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  30831803 aagttgtgacaaaagttgtcaaaaa-tggttgttcaaatat 30831764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 36133022 - 36132979
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  36133022 aaagttgtcacaaaa-ttgtcacaaagtggttgtacaaatatcat 36132979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39234200 - 39234244
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    ||||||||||  |||||||| ||||||| ||||||||||||||||    
T  39234200 agaaagttgttgcaaaagttatcaaaaaatggttgttcaaatatc 39234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 101926 - 101972
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  101926 agaaagttgtcacaaaagttgtcaaaaaatggttgttcagatatcat 101972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 6542 - 6586
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| ||||| || |||||||||||||||    
T  6542 aaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcat 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 822 - 776
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    ||||||||||||||||| || ||||||| ||| ||||||||||||||    
T  822 agaaagttgtcacaaaaattatcaaaaaatggatgttcaaatatcat 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11015 - 10969
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  11015 agaaagttgtcacaaaagttgtcccaaaatggatgttcaaatatcat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8718 - 8673
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||    
T  8718 agaaagttgtcacaaaagttgt-aaaaaatgattgttcaaatatcat 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44786 - 44832
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||| | ||||| ||||||||||| ||||||    
T  44786 agaaagttgtcacaaaagttataaaaaaatggttgttcaagtatcat 44832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 219685 - 219730
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  219685 agaaagttgtca-aaaagttgtcacaaagtggttgtacaaatatcat 219730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 366344 - 366299
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  366344 agaaagttgtcacaaaagttgttaaaaa-tggttgtacaaatatcat 366299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 22876 - 22920
Alignment:
Q  3 aaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcat 47  Q
    |||||||||| ||||||||||| ||| || |||||||||||||||    
T  22876 aaagttgtcataaaagttgtcacaaaatgattgttcaaatatcat 22920  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 469658 - 469702
Alignment:
Q  1 agaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatc 45  Q
    ||||||||||||||||| || ||||||| ||||||| ||||||||    
T  469658 agaaagttgtcacaaaaattatcaaaaaatggttgtacaaatatc 469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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