View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14565_low_47 (Length: 249)
Name: NF14565_low_47
Description: NF14565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14565_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 21788231 - 21788452
Alignment:
| Q |
22 |
ttgatgcttatggaagtgatggaaattcctccattcttttaaattttacccccactttctattaacaaacatagaataaatattattatttgccaatcca |
121 |
Q |
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| T |
21788231 |
ttgatgcttatggaagtgatggaaattcctccattcatttaaattttaccctcactttctattaacaaacatagaataaatattattatttgccaatcca |
21788330 |
T |
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| Q |
122 |
tgttaagagagttgttggaaaattaaggccatttcgtattttaaatttctaatcaagctactgacctgtaaagaggaccaactattttggtctcatacaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21788331 |
tgttaagagagttgttggaaaattaaggccatttcgtattttaaatttctaatcaagctactgacctgtaaagaggaccaactattttggtctcatacaa |
21788430 |
T |
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| Q |
222 |
ttagtcaccctggcatatgcat |
243 |
Q |
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|||||||||||||||||||||| |
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| T |
21788431 |
ttagtcaccctggcatatgcat |
21788452 |
T |
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