View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14565_low_55 (Length: 228)

Name: NF14565_low_55
Description: NF14565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14565_low_55
NF14565_low_55
[»] chr8 (64 HSPs)
chr8 (21-205)||(4479296-4479480)
chr8 (20-180)||(8141052-8141213)
chr8 (21-180)||(15884556-15884715)
chr8 (29-180)||(1012985-1013137)
chr8 (20-180)||(10927556-10927717)
chr8 (20-180)||(45521119-45521279)
chr8 (20-178)||(43032853-43033012)
chr8 (20-180)||(2467117-2467278)
chr8 (20-180)||(24837192-24837353)
chr8 (20-180)||(6100422-6100583)
chr8 (20-180)||(14666070-14666231)
chr8 (20-180)||(583764-583923)
chr8 (20-180)||(3418512-3418673)
chr8 (20-180)||(8997543-8997704)
chr8 (20-180)||(43027255-43027416)
chr8 (20-180)||(10535403-10535563)
chr8 (20-180)||(9859994-9860156)
chr8 (20-180)||(16893887-16894046)
chr8 (20-180)||(14846526-14846686)
chr8 (20-179)||(17981392-17981552)
chr8 (64-185)||(38922457-38922579)
chr8 (20-180)||(2964026-2964187)
chr8 (20-127)||(18374013-18374121)
chr8 (30-180)||(3567856-3568005)
chr8 (20-179)||(33401799-33401958)
chr8 (25-180)||(11785867-11786021)
chr8 (20-180)||(44893277-44893438)
chr8 (20-183)||(34710566-34710730)
chr8 (20-147)||(36662388-36662515)
chr8 (48-129)||(6042822-6042904)
chr8 (20-106)||(11298266-11298352)
chr8 (21-180)||(7673657-7673813)
chr8 (20-180)||(17845683-17845841)
chr8 (20-107)||(26570948-26571035)
chr8 (73-180)||(30903286-30903393)
chr8 (20-181)||(38235854-38236016)
chr8 (20-183)||(68097-68261)
chr8 (20-104)||(23895595-23895679)
chr8 (27-103)||(24938568-24938644)
chr8 (54-129)||(33935768-33935844)
chr8 (20-107)||(16291202-16291289)
chr8 (25-107)||(13357960-13358042)
chr8 (46-180)||(18091351-18091485)
chr8 (47-180)||(22810030-22810161)
chr8 (37-146)||(22958754-22958864)
chr8 (20-100)||(3692864-3692944)
chr8 (54-129)||(28333039-28333114)
chr8 (54-180)||(29933723-29933849)
chr8 (70-180)||(34846764-34846874)
chr8 (21-90)||(3379812-3379881)
chr8 (20-180)||(6940508-6940668)
chr8 (63-107)||(8586981-8587025)
chr8 (32-175)||(43349327-43349471)
chr8 (20-105)||(22212514-22212600)
chr8 (24-61)||(4772054-4772091)
chr8 (20-136)||(27975885-27976002)
chr8 (20-136)||(28033154-28033271)
chr8 (20-83)||(993236-993299)
chr8 (63-172)||(34613820-34613930)
chr8 (113-183)||(42123341-42123411)
chr8 (31-96)||(25848211-25848276)
chr8 (20-89)||(39969914-39969983)
chr8 (112-180)||(9395910-9395978)
chr8 (56-104)||(21174167-21174215)
[»] chr7 (73 HSPs)
chr7 (20-180)||(48804632-48804793)
chr7 (20-180)||(10047875-10048036)
chr7 (20-180)||(17748381-17748542)
chr7 (20-183)||(1797406-1797570)
chr7 (20-180)||(43861971-43862132)
chr7 (21-180)||(27875088-27875247)
chr7 (20-129)||(38578866-38578976)
chr7 (20-180)||(1605890-1606051)
chr7 (20-180)||(13095807-13095968)
chr7 (20-180)||(22993366-22993527)
chr7 (20-180)||(21530697-21530858)
chr7 (20-180)||(43346778-43346939)
chr7 (40-183)||(36619273-36619417)
chr7 (22-180)||(18785618-18785777)
chr7 (20-180)||(4195201-4195362)
chr7 (20-180)||(22973916-22974077)
chr7 (20-180)||(42210261-42210422)
chr7 (20-180)||(43925461-43925622)
chr7 (20-180)||(47341825-47341986)
chr7 (25-180)||(5039422-5039578)
chr7 (20-183)||(5069814-5069978)
chr7 (21-180)||(26423288-26423447)
chr7 (20-180)||(27028228-27028389)
chr7 (20-180)||(34659175-34659336)
chr7 (20-176)||(3353378-3353534)
chr7 (44-180)||(19914726-19914862)
chr7 (20-179)||(42032046-42032206)
chr7 (20-180)||(39474888-39475050)
chr7 (20-180)||(39420787-39420947)
chr7 (20-104)||(48551883-48551967)
chr7 (20-186)||(16802066-16802233)
chr7 (20-179)||(29805439-29805598)
chr7 (20-106)||(41945497-41945583)
chr7 (20-180)||(14650266-14650427)
chr7 (20-180)||(22573762-22573922)
chr7 (26-180)||(4228759-4228911)
chr7 (20-129)||(45697189-45697298)
chr7 (20-140)||(48244355-48244476)
chr7 (25-180)||(45960007-45960162)
chr7 (20-107)||(8734685-8734772)
chr7 (20-129)||(10317745-10317854)
chr7 (73-183)||(11607077-11607187)
chr7 (20-129)||(49142668-49142778)
chr7 (41-180)||(4973130-4973270)
chr7 (20-180)||(24969325-24969484)
chr7 (27-107)||(28396166-28396246)
chr7 (20-180)||(22268040-22268189)
chr7 (20-107)||(23658202-23658289)
chr7 (20-107)||(28744185-28744272)
chr7 (20-180)||(29151889-29152050)
chr7 (20-83)||(32768984-32769047)
chr7 (20-177)||(4705983-4706141)
chr7 (20-129)||(21190779-21190889)
chr7 (20-89)||(24983417-24983487)
chr7 (20-180)||(365089-365250)
chr7 (20-90)||(3603397-3603467)
chr7 (44-129)||(30827292-30827378)
chr7 (20-106)||(37514945-37515031)
chr7 (28-180)||(45447919-45448072)
chr7 (20-118)||(32823254-32823353)
chr7 (25-79)||(9685778-9685832)
chr7 (25-138)||(9813967-9814077)
chr7 (23-104)||(14535317-14535398)
chr7 (48-180)||(20247197-20247329)
chr7 (23-96)||(38988934-38989006)
chr7 (20-76)||(23060731-23060787)
chr7 (27-83)||(39230546-39230602)
chr7 (20-74)||(34127644-34127698)
chr7 (29-83)||(41267932-41267986)
chr7 (62-179)||(46414625-46414743)
chr7 (20-49)||(12422126-12422155)
chr7 (96-180)||(34127695-34127780)
chr7 (20-180)||(48224730-48224890)
[»] chr6 (46 HSPs)
chr6 (20-180)||(21898598-21898759)
chr6 (20-180)||(5253222-5253383)
chr6 (20-180)||(6606096-6606257)
chr6 (20-180)||(13036003-13036164)
chr6 (20-180)||(14107357-14107518)
chr6 (20-183)||(3601031-3601195)
chr6 (20-179)||(3587944-3588104)
chr6 (20-180)||(29333138-29333298)
chr6 (20-180)||(8611973-8612134)
chr6 (20-180)||(8932611-8932772)
chr6 (20-180)||(8944077-8944238)
chr6 (25-180)||(2271307-2271461)
chr6 (20-180)||(8938661-8938822)
chr6 (20-180)||(19089448-19089609)
chr6 (20-179)||(30788852-30789010)
chr6 (20-180)||(29444764-29444925)
chr6 (20-180)||(9179735-9179896)
chr6 (20-104)||(9633624-9633708)
chr6 (20-161)||(34954618-34954760)
chr6 (20-180)||(13468883-13469044)
chr6 (20-180)||(24671865-24672026)
chr6 (20-129)||(12606431-12606541)
chr6 (20-148)||(12635796-12635925)
chr6 (21-129)||(8149797-8149905)
chr6 (40-180)||(19230578-19230717)
chr6 (27-180)||(15643840-15643988)
chr6 (25-176)||(17114901-17115053)
chr6 (53-183)||(9147248-9147379)
chr6 (20-83)||(14783419-14783482)
chr6 (20-107)||(31129201-31129288)
chr6 (20-177)||(10311468-10311626)
chr6 (20-183)||(13584445-13584612)
chr6 (30-108)||(8888905-8888983)
chr6 (21-106)||(32157167-32157252)
chr6 (20-128)||(13391289-13391397)
chr6 (20-118)||(5029829-5029928)
chr6 (42-176)||(9366445-9366579)
chr6 (21-127)||(11142606-11142713)
chr6 (20-118)||(30410457-30410556)
chr6 (96-180)||(3030693-3030778)
chr6 (20-83)||(14326045-14326108)
chr6 (20-83)||(14419055-14419118)
chr6 (69-180)||(21016799-21016911)
chr6 (50-180)||(21945239-21945370)
chr6 (44-180)||(33939961-33940098)
chr6 (76-179)||(32048402-32048506)
[»] chr4 (93 HSPs)
chr4 (20-180)||(29895738-29895899)
chr4 (20-180)||(38075384-38075545)
chr4 (20-180)||(2559258-2559419)
chr4 (20-180)||(6779162-6779323)
chr4 (20-180)||(43458564-43458725)
chr4 (20-180)||(53599011-53599172)
chr4 (21-183)||(40780861-40781024)
chr4 (20-186)||(47078403-47078570)
chr4 (48-180)||(1446777-1446910)
chr4 (20-180)||(38165978-38166139)
chr4 (20-180)||(24166401-24166562)
chr4 (20-180)||(52950033-52950194)
chr4 (20-180)||(55920985-55921146)
chr4 (21-180)||(33647672-33647832)
chr4 (20-129)||(7246645-7246755)
chr4 (20-167)||(36145214-36145362)
chr4 (26-180)||(8888973-8889128)
chr4 (20-118)||(16450313-16450412)
chr4 (20-169)||(42722576-42722726)
chr4 (20-180)||(49260664-49260825)
chr4 (20-179)||(5472847-5473007)
chr4 (20-118)||(4738631-4738730)
chr4 (21-183)||(6032643-6032803)
chr4 (22-183)||(295534-295695)
chr4 (32-180)||(41162893-41163042)
chr4 (20-167)||(20128273-20128421)
chr4 (20-167)||(15839934-15840081)
chr4 (20-107)||(17080068-17080155)
chr4 (20-167)||(36262766-36262912)
chr4 (20-180)||(3574447-3574606)
chr4 (20-180)||(27248379-27248538)
chr4 (20-161)||(38168227-38168368)
chr4 (20-129)||(43468349-43468459)
chr4 (20-129)||(48015072-48015182)
chr4 (31-128)||(3507274-3507371)
chr4 (20-180)||(14123967-14124128)
chr4 (20-180)||(15732447-15732608)
chr4 (32-128)||(20532420-20532517)
chr4 (20-164)||(30317200-30317345)
chr4 (23-180)||(1940779-1940934)
chr4 (21-180)||(13073489-13073649)
chr4 (20-183)||(20421722-20421885)
chr4 (21-177)||(7741879-7742036)
chr4 (20-180)||(29588687-29588848)
chr4 (20-179)||(42722378-42722537)
chr4 (20-115)||(47682381-47682476)
chr4 (44-186)||(54524877-54525019)
chr4 (20-129)||(10541018-10541127)
chr4 (20-128)||(3159468-3159577)
chr4 (20-180)||(15829650-15829811)
chr4 (30-178)||(40272340-40272489)
chr4 (20-164)||(24850626-24850770)
chr4 (29-180)||(26479957-26480109)
chr4 (20-180)||(31588635-31588798)
chr4 (25-180)||(48317279-48317435)
chr4 (20-128)||(48834699-48834807)
chr4 (20-129)||(16645120-16645230)
chr4 (20-180)||(12703544-12703705)
chr4 (22-107)||(21429326-21429411)
chr4 (20-180)||(41339395-41339555)
chr4 (20-163)||(2686454-2686598)
chr4 (20-148)||(21192625-21192752)
chr4 (80-180)||(27531717-27531817)
chr4 (48-128)||(8064825-8064906)
chr4 (29-110)||(46108713-46108794)
chr4 (20-180)||(7000475-7000631)
chr4 (49-172)||(20354596-20354720)
chr4 (20-95)||(14567276-14567351)
chr4 (20-95)||(14597899-14597974)
chr4 (20-107)||(18531544-18531631)
chr4 (20-129)||(4736599-4736708)
chr4 (20-129)||(6862227-6862335)
chr4 (70-162)||(55005355-55005448)
chr4 (20-128)||(14858714-14858822)
chr4 (20-103)||(49952144-49952228)
chr4 (20-104)||(50485971-50486055)
chr4 (20-107)||(35359761-35359848)
chr4 (20-126)||(37369041-37369148)
chr4 (28-83)||(54946298-54946353)
chr4 (25-79)||(13552155-13552209)
chr4 (20-164)||(38841367-38841509)
chr4 (20-129)||(13436814-13436916)
chr4 (20-129)||(17946492-17946601)
chr4 (20-104)||(8424582-8424666)
chr4 (20-104)||(48656247-48656331)
chr4 (20-103)||(24478983-24479066)
chr4 (27-94)||(37194848-37194915)
chr4 (20-95)||(45721123-45721198)
chr4 (21-104)||(48352509-48352592)
chr4 (20-78)||(25406562-25406620)
chr4 (20-73)||(27531669-27531722)
chr4 (93-180)||(1123863-1123951)
chr4 (20-108)||(28944956-28945043)
[»] chr5 (87 HSPs)
chr5 (20-180)||(42086274-42086435)
chr5 (20-180)||(1538378-1538539)
chr5 (20-180)||(38897718-38897878)
chr5 (21-180)||(37263188-37263347)
chr5 (20-180)||(5731919-5732080)
chr5 (20-180)||(8513466-8513627)
chr5 (21-180)||(20525785-20525945)
chr5 (20-180)||(19572671-19572832)
chr5 (20-180)||(41163459-41163619)
chr5 (20-128)||(9805003-9805112)
chr5 (20-180)||(9812819-9812980)
chr5 (20-180)||(7866528-7866689)
chr5 (20-180)||(12704961-12705122)
chr5 (20-180)||(30349526-30349687)
chr5 (21-128)||(42291505-42291613)
chr5 (20-129)||(23383655-23383765)
chr5 (27-183)||(7308370-7308527)
chr5 (20-172)||(25417182-25417335)
chr5 (20-140)||(40117402-40117523)
chr5 (20-180)||(12766078-12766239)
chr5 (20-164)||(14588616-14588761)
chr5 (20-180)||(9168252-9168411)
chr5 (20-180)||(18136275-18136440)
chr5 (20-162)||(13664225-13664368)
chr5 (20-172)||(42861217-42861370)
chr5 (20-180)||(2485144-2485304)
chr5 (20-107)||(39099778-39099865)
chr5 (20-129)||(12081906-12082016)
chr5 (63-180)||(28857075-28857193)
chr5 (20-128)||(3653913-3654020)
chr5 (20-183)||(20692877-20693041)
chr5 (20-179)||(41800925-41801085)
chr5 (20-180)||(14728029-14728191)
chr5 (20-180)||(23247351-23247511)
chr5 (64-180)||(26077088-26077205)
chr5 (20-167)||(14152010-14152158)
chr5 (24-107)||(20590020-20590103)
chr5 (20-107)||(20682616-20682703)
chr5 (20-107)||(43399149-43399236)
chr5 (20-189)||(11845800-11845970)
chr5 (22-167)||(28862785-28862931)
chr5 (38-163)||(30995085-30995211)
chr5 (40-108)||(14974343-14974411)
chr5 (20-104)||(20255393-20255477)
chr5 (20-127)||(21375352-21375459)
chr5 (20-180)||(5079278-5079438)
chr5 (32-180)||(35561829-35561978)
chr5 (20-83)||(27648424-27648487)
chr5 (20-129)||(18045637-18045746)
chr5 (30-180)||(18294493-18294643)
chr5 (20-180)||(4016254-4016415)
chr5 (29-129)||(15034073-15034174)
chr5 (21-172)||(20223011-20223160)
chr5 (20-129)||(38369698-38369807)
chr5 (20-107)||(18262617-18262704)
chr5 (20-164)||(1898964-1899103)
chr5 (20-140)||(21149721-21149842)
chr5 (31-108)||(32874807-32874884)
chr5 (20-108)||(7616940-7617028)
chr5 (20-104)||(24463885-24463969)
chr5 (44-183)||(35813021-35813161)
chr5 (20-75)||(28857002-28857057)
chr5 (70-172)||(35403561-35403664)
chr5 (99-180)||(6767130-6767211)
chr5 (20-180)||(39728334-39728495)
chr5 (20-104)||(7336644-7336727)
chr5 (20-104)||(24653811-24653894)
chr5 (32-104)||(24875369-24875441)
chr5 (104-180)||(28856924-28857000)
chr5 (29-127)||(31890090-31890189)
chr5 (20-75)||(36783296-36783351)
chr5 (70-172)||(38297013-38297116)
chr5 (20-178)||(24498932-24499090)
chr5 (55-183)||(35006769-35006903)
chr5 (20-180)||(17693339-17693493)
chr5 (20-73)||(25950593-25950646)
chr5 (20-183)||(18327714-18327868)
chr5 (21-157)||(21487587-21487721)
chr5 (20-118)||(22655157-22655255)
chr5 (20-150)||(25452903-25453032)
chr5 (32-106)||(35245017-35245091)
chr5 (26-95)||(6764462-6764531)
chr5 (20-89)||(16757417-16757486)
chr5 (48-129)||(28615248-28615329)
chr5 (20-61)||(28857213-28857254)
chr5 (20-108)||(20228737-20228825)
chr5 (21-73)||(40060339-40060391)
[»] chr3 (92 HSPs)
chr3 (20-176)||(29135863-29136020)
chr3 (20-180)||(54261172-54261333)
chr3 (20-180)||(47471778-47471938)
chr3 (20-180)||(29127865-29128026)
chr3 (29-180)||(49198297-49198449)
chr3 (21-182)||(6462356-6462518)
chr3 (20-180)||(25294906-25295067)
chr3 (20-180)||(29762155-29762316)
chr3 (20-180)||(45877400-45877561)
chr3 (20-180)||(48341966-48342127)
chr3 (24-180)||(10040503-10040659)
chr3 (20-172)||(47749105-47749257)
chr3 (20-180)||(7328790-7328950)
chr3 (20-179)||(30767247-30767407)
chr3 (20-179)||(3136694-3136853)
chr3 (20-180)||(13893872-13894033)
chr3 (20-180)||(15320132-15320293)
chr3 (20-147)||(47219123-47219251)
chr3 (21-148)||(53649705-53649833)
chr3 (54-180)||(42412808-42412935)
chr3 (23-180)||(26207804-26207962)
chr3 (20-180)||(33251608-33251769)
chr3 (20-180)||(35315902-35316063)
chr3 (20-179)||(28572211-28572371)
chr3 (20-180)||(7650173-7650334)
chr3 (20-180)||(51060281-51060442)
chr3 (21-179)||(3507534-3507694)
chr3 (22-129)||(8362574-8362682)
chr3 (21-180)||(51682955-51683115)
chr3 (42-180)||(3755516-3755655)
chr3 (49-180)||(39849018-39849149)
chr3 (20-129)||(15795494-15795603)
chr3 (20-126)||(26043812-26043919)
chr3 (20-180)||(7310703-7310864)
chr3 (20-180)||(41630512-41630673)
chr3 (20-128)||(22909782-22909890)
chr3 (20-183)||(31072821-31072985)
chr3 (20-180)||(45450447-45450605)
chr3 (20-163)||(49543482-49543626)
chr3 (54-180)||(10855330-10855457)
chr3 (20-91)||(49021203-49021274)
chr3 (20-180)||(19146909-19147068)
chr3 (20-180)||(30045767-30045928)
chr3 (21-149)||(34662320-34662449)
chr3 (32-108)||(8164572-8164648)
chr3 (25-180)||(35923628-35923784)
chr3 (25-179)||(22405548-22405703)
chr3 (42-180)||(32873571-32873709)
chr3 (20-129)||(928597-928707)
chr3 (20-129)||(23511564-23511674)
chr3 (25-118)||(50405608-50405702)
chr3 (20-106)||(55069679-55069765)
chr3 (80-180)||(37092565-37092666)
chr3 (43-179)||(47303512-47303649)
chr3 (85-172)||(7612991-7613079)
chr3 (20-104)||(54237471-54237555)
chr3 (22-180)||(4638100-4638259)
chr3 (20-123)||(24506648-24506751)
chr3 (25-127)||(40660332-40660435)
chr3 (31-129)||(45402362-45402461)
chr3 (20-172)||(26361967-26362118)
chr3 (20-128)||(35998571-35998679)
chr3 (66-180)||(11687155-11687270)
chr3 (25-108)||(33688970-33689053)
chr3 (20-103)||(43330732-43330815)
chr3 (33-129)||(52364813-52364910)
chr3 (20-108)||(13367443-13367531)
chr3 (20-129)||(19873364-19873479)
chr3 (20-76)||(36043674-36043730)
chr3 (20-179)||(38394175-38394333)
chr3 (48-127)||(3763050-3763129)
chr3 (85-180)||(11025438-11025532)
chr3 (54-180)||(28242224-28242351)
chr3 (20-83)||(44064588-44064651)
chr3 (73-178)||(49082772-49082878)
chr3 (32-180)||(24146340-24146489)
chr3 (40-180)||(40944829-40944969)
chr3 (20-180)||(41219539-41219699)
chr3 (20-81)||(47164152-47164213)
chr3 (20-104)||(15084945-15085029)
chr3 (20-103)||(2668085-2668168)
chr3 (44-107)||(7648760-7648823)
chr3 (20-103)||(34374442-34374525)
chr3 (20-103)||(37319889-37319972)
chr3 (74-180)||(46529924-46530031)
chr3 (21-103)||(2029268-2029350)
chr3 (30-71)||(8683250-8683291)
chr3 (20-83)||(29195319-29195382)
chr3 (20-83)||(50753341-50753404)
chr3 (74-139)||(13167497-13167563)
chr3 (20-89)||(10043720-10043789)
chr3 (21-129)||(25515749-25515857)
[»] chr1 (87 HSPs)
chr1 (20-180)||(5855469-5855630)
chr1 (20-183)||(10172971-10173135)
chr1 (20-180)||(10422735-10422896)
chr1 (20-180)||(49078061-49078222)
chr1 (20-180)||(26325759-26325920)
chr1 (20-180)||(26660085-26660245)
chr1 (20-180)||(41663856-41664017)
chr1 (20-180)||(11397889-11398049)
chr1 (20-179)||(43959821-43959981)
chr1 (20-179)||(9659179-9659338)
chr1 (20-180)||(8763938-8764099)
chr1 (20-180)||(18915814-18915975)
chr1 (20-172)||(30927727-30927880)
chr1 (20-179)||(32819-32979)
chr1 (30-180)||(33418125-33418276)
chr1 (20-140)||(16263532-16263653)
chr1 (20-180)||(17642004-17642165)
chr1 (20-164)||(45361882-45362027)
chr1 (20-175)||(33498839-33498995)
chr1 (53-183)||(47312932-47313062)
chr1 (20-180)||(2980931-2981092)
chr1 (20-180)||(33004015-33004176)
chr1 (20-129)||(37339817-37339928)
chr1 (30-180)||(14254278-14254429)
chr1 (20-127)||(44969665-44969772)
chr1 (29-166)||(10336477-10336615)
chr1 (20-180)||(5503978-5504139)
chr1 (20-179)||(32142846-32143005)
chr1 (20-179)||(32150922-32151082)
chr1 (20-180)||(46929738-46929898)
chr1 (55-180)||(48798105-48798231)
chr1 (20-180)||(15465912-15466073)
chr1 (20-180)||(18649352-18649513)
chr1 (27-180)||(25165349-25165501)
chr1 (20-180)||(34697282-34697443)
chr1 (20-180)||(40288477-40288638)
chr1 (20-180)||(50503361-50503522)
chr1 (20-179)||(892302-892457)
chr1 (20-183)||(2567220-2567384)
chr1 (20-96)||(4581682-4581758)
chr1 (20-180)||(17389719-17389879)
chr1 (20-180)||(12036743-12036905)
chr1 (23-180)||(17092480-17092638)
chr1 (20-118)||(21849205-21849303)
chr1 (20-161)||(34719742-34719884)
chr1 (20-180)||(15238106-15238267)
chr1 (20-180)||(18808212-18808373)
chr1 (20-105)||(35211172-35211257)
chr1 (20-180)||(45726433-45726594)
chr1 (20-180)||(26258643-26258803)
chr1 (20-104)||(50371834-50371918)
chr1 (20-161)||(16956432-16956574)
chr1 (20-180)||(12744523-12744684)
chr1 (20-180)||(12755513-12755674)
chr1 (20-179)||(14357703-14357863)
chr1 (20-163)||(17358471-17358615)
chr1 (20-180)||(42744734-42744880)
chr1 (20-103)||(38791610-38791693)
chr1 (29-96)||(42710147-42710214)
chr1 (64-180)||(34877937-34878054)
chr1 (42-162)||(5063866-5063986)
chr1 (64-175)||(6563393-6563505)
chr1 (80-180)||(8905211-8905311)
chr1 (20-127)||(31576547-31576655)
chr1 (20-129)||(35908755-35908864)
chr1 (30-105)||(10507721-10507796)
chr1 (20-103)||(19195391-19195469)
chr1 (20-107)||(50094925-50095012)
chr1 (20-89)||(6899597-6899666)
chr1 (41-129)||(31152714-31152803)
chr1 (20-73)||(51437512-51437565)
chr1 (55-129)||(28324615-28324690)
chr1 (48-179)||(31734237-31734368)
chr1 (70-180)||(45536656-45536766)
chr1 (20-129)||(13265936-13266041)
chr1 (78-163)||(34334353-34334439)
chr1 (98-180)||(41743220-41743302)
chr1 (20-172)||(9853277-9853430)
chr1 (20-180)||(41696598-41696758)
chr1 (32-105)||(48761199-48761272)
chr1 (24-147)||(13262063-13262187)
chr1 (20-140)||(25178576-25178696)
chr1 (50-109)||(17988690-17988749)
chr1 (20-106)||(5143154-5143239)
chr1 (44-129)||(18708564-18708650)
chr1 (25-118)||(38859121-38859215)
chr1 (20-77)||(3850742-3850799)
[»] chr2 (87 HSPs)
chr2 (20-166)||(41220595-41220742)
chr2 (20-180)||(7747220-7747381)
chr2 (20-180)||(12864170-12864331)
chr2 (20-180)||(38005348-38005509)
chr2 (20-167)||(25540403-25540551)
chr2 (20-180)||(18902529-18902690)
chr2 (20-180)||(44945540-44945700)
chr2 (21-180)||(20612534-20612696)
chr2 (20-180)||(8410077-8410238)
chr2 (20-180)||(22593081-22593240)
chr2 (20-180)||(38962709-38962870)
chr2 (31-180)||(10026626-10026776)
chr2 (20-180)||(2550814-2550975)
chr2 (20-180)||(3643886-3644047)
chr2 (20-180)||(14169608-14169769)
chr2 (20-180)||(44139430-44139591)
chr2 (30-180)||(331447-331598)
chr2 (20-178)||(6358150-6358309)
chr2 (26-180)||(39201513-39201668)
chr2 (20-129)||(10823057-10823167)
chr2 (20-176)||(41031905-41032061)
chr2 (20-180)||(42770650-42770811)
chr2 (20-180)||(35946685-35946845)
chr2 (25-180)||(10669538-10669694)
chr2 (20-118)||(16325603-16325702)
chr2 (22-180)||(34356152-34356311)
chr2 (20-129)||(12455307-12455417)
chr2 (20-180)||(3811690-3811851)
chr2 (20-184)||(37560115-37560280)
chr2 (20-183)||(21286387-21286551)
chr2 (40-128)||(24179568-24179655)
chr2 (20-180)||(29653574-29653729)
chr2 (20-183)||(31596431-31596595)
chr2 (20-176)||(33005702-33005858)
chr2 (20-172)||(34130301-34130452)
chr2 (54-180)||(21180347-21180474)
chr2 (31-180)||(10046487-10046636)
chr2 (20-129)||(11069875-11069985)
chr2 (20-105)||(20116611-20116696)
chr2 (20-172)||(25549682-25549835)
chr2 (20-180)||(29422161-29422322)
chr2 (20-183)||(16034880-16035044)
chr2 (40-183)||(45263686-45263830)
chr2 (25-179)||(7787003-7787158)
chr2 (20-103)||(9360747-9360830)
chr2 (20-118)||(34722688-34722787)
chr2 (20-172)||(2528340-2528493)
chr2 (20-180)||(18649025-18649186)
chr2 (20-172)||(19976806-19976959)
chr2 (20-109)||(29421300-29421389)
chr2 (20-129)||(39806884-39806994)
chr2 (20-180)||(13026410-13026571)
chr2 (20-183)||(3848913-3849077)
chr2 (20-107)||(34346286-34346373)
chr2 (20-184)||(28616378-28616544)
chr2 (20-105)||(27725962-27726047)
chr2 (20-118)||(28525454-28525554)
chr2 (20-180)||(34738332-34738484)
chr2 (44-104)||(13104848-13104908)
chr2 (30-129)||(33634448-33634548)
chr2 (20-180)||(44773211-44773370)
chr2 (20-95)||(26805328-26805403)
chr2 (21-83)||(21641994-21642056)
chr2 (54-183)||(30721888-30722018)
chr2 (70-180)||(2149243-2149355)
chr2 (20-180)||(14853365-14853527)
chr2 (54-180)||(15079429-15079556)
chr2 (66-180)||(37804936-37805051)
chr2 (20-75)||(44023347-44023402)
chr2 (20-180)||(44193425-44193589)
chr2 (20-109)||(16813164-16813253)
chr2 (20-109)||(16852443-16852532)
chr2 (66-127)||(25604594-25604655)
chr2 (54-162)||(41187813-41187922)
chr2 (21-129)||(2784930-2785038)
chr2 (44-183)||(41187652-41187792)
chr2 (73-183)||(29802754-29802864)
chr2 (20-71)||(44548723-44548774)
chr2 (23-180)||(31740763-31740921)
chr2 (20-73)||(792208-792261)
chr2 (20-164)||(18846220-18846365)
chr2 (21-92)||(36480438-36480506)
chr2 (21-77)||(1773644-1773700)
chr2 (29-81)||(35443873-35443925)
chr2 (69-180)||(40968963-40969075)
chr2 (111-183)||(4080408-4080480)
chr2 (20-52)||(29299353-29299385)
[»] scaffold0316 (1 HSPs)
scaffold0316 (20-180)||(1613-1774)
[»] scaffold0170 (1 HSPs)
scaffold0170 (30-180)||(9794-9945)
[»] scaffold0009 (2 HSPs)
scaffold0009 (20-178)||(42831-42990)
scaffold0009 (21-180)||(9385-9551)
[»] scaffold0291 (1 HSPs)
scaffold0291 (20-129)||(6855-6965)
[»] scaffold0016 (1 HSPs)
scaffold0016 (20-129)||(8700-8810)
[»] scaffold0002 (4 HSPs)
scaffold0002 (20-180)||(319372-319532)
scaffold0002 (20-180)||(519-680)
scaffold0002 (86-180)||(412091-412186)
scaffold0002 (74-139)||(139425-139491)
[»] scaffold0209 (1 HSPs)
scaffold0209 (20-180)||(12524-12683)
[»] scaffold0384 (1 HSPs)
scaffold0384 (29-180)||(5922-6073)
[»] scaffold0376 (1 HSPs)
scaffold0376 (20-180)||(12619-12780)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-118)||(155710-155809)
scaffold0010 (21-180)||(25784-25944)
[»] scaffold0004 (2 HSPs)
scaffold0004 (20-129)||(7834-7944)
scaffold0004 (20-177)||(94979-95136)
[»] scaffold0006 (1 HSPs)
scaffold0006 (23-180)||(68466-68621)
[»] scaffold0029 (1 HSPs)
scaffold0029 (20-185)||(40988-41154)
[»] scaffold0086 (1 HSPs)
scaffold0086 (20-180)||(26132-26293)
[»] scaffold0011 (2 HSPs)
scaffold0011 (20-180)||(224266-224427)
scaffold0011 (21-183)||(186464-186626)
[»] scaffold0001 (1 HSPs)
scaffold0001 (20-108)||(65151-65239)
[»] scaffold0079 (1 HSPs)
scaffold0079 (20-129)||(8175-8273)
[»] scaffold0155 (1 HSPs)
scaffold0155 (21-107)||(19278-19364)
[»] scaffold0041 (1 HSPs)
scaffold0041 (20-109)||(25106-25195)
[»] scaffold0341 (1 HSPs)
scaffold0341 (64-175)||(18586-18698)
[»] scaffold0005 (3 HSPs)
scaffold0005 (54-185)||(271107-271239)
scaffold0005 (20-95)||(219404-219479)
scaffold0005 (20-95)||(250024-250099)
[»] scaffold0013 (1 HSPs)
scaffold0013 (20-125)||(51735-51837)
[»] scaffold0050 (1 HSPs)
scaffold0050 (20-158)||(72604-72742)
[»] scaffold0223 (1 HSPs)
scaffold0223 (20-103)||(16906-16989)
[»] scaffold0116 (1 HSPs)
scaffold0116 (29-122)||(17397-17491)
[»] scaffold0045 (1 HSPs)
scaffold0045 (20-79)||(58032-58091)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 4479296 - 4479480
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcccctgggaatcgaatc 4479395  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgattgttgaagattcattttcatctc 205  Q
    |||||||| |||  |||||| ||| ||| |||| |||||||||| |  |||| ||||||||||  |||||||||||||| |||||    
T  4479396 cggtattctacaggtacgtccttgaaaggaacttcttgccactgaaacccaaacaacttgattagtgaagattcattttgatctc 4479480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8141213 - 8141052
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||| ||||||| || |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  8141213 ctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaa 8141114  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| ||||||| | |||||||||||||||| |||| |||||||    
T  8141113 cccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaacttg 8141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 15884556 - 15884715
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||| |    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacc 15884655  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||| ||  |||||| ||||||| | |||||| ||||||||| |||| |||||||    
T  15884656 cggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttg 15884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 1012985 - 1013137
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtatt 127  Q
    |||||| |||||||| ||||||| |||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| ||||||||    
T  1012985 cggttttcgatccactaaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtatt 1013084  T
Q  128 ccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || |  ||||||| |||||| || |||||||||||||||| ||||||||||||    
T  1013085 ccccggatacgtccttggaaaaagctccttgccactggagcccaagcaacttg 1013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 10927717 - 10927556
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  10927717 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 10927618  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||| ||||| ||||||||||||| || ||||||||||||    
T  10927617 cccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaacttg 10927556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 45521279 - 45521119
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||| ||||||||  |||||||| ||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||     
T  45521279 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaac 45521180  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| |   ||| || ||||||  |||||||||||||||||| ||||||||||||    
T  45521179 ccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttg 45521119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 43033012 - 43032853
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| |||||||| |||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  43033012 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 43032913  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaact 178  Q
    |||| |||| | || |||| |  ||||||| |||||||||||||||||| |||| |||||    
T  43032912 tccgatatttcccagatacatttttggaaggaactccttgccactggagcccaaacaact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 2467117 - 2467278
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||||||  ||||||  ||||||||||||| |||||||||| ||||| |||| |||||||||||| |||||| ||||||| |||||||    
T  2467117 ctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaa 2467216  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  2467217 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 2467278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 24837353 - 24837192
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||| ||| ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  24837353 ctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaa 24837254  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||||||||| |   |||||  ||||||| | |||||||||||||||| ||||||||||||    
T  24837253 cacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttg 24837192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 6100583 - 6100422
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||| ||| |||| ||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  6100583 ctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 6100484  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||| ||| | ||||||||||||| || |||| |||||||    
T  6100483 cccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttg 6100422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 14666070 - 14666231
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| ||| |||||||  |||| ||||||||  ||||  |||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  14666070 ctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 14666169  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||  | |||||||||||||||| ||||||||||||    
T  14666170 cccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaacttg 14666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 583923 - 583764
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||  ||||| ||||||||| |||||||| || |||||||||||||||||| ||||||| ||||||||||| |||| |||||||||     
T  583923 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt-ccctaggaatcgaac 583825  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||| | | | |||||| ||||||| | |||||||||||| ||| |||| |||||||    
T  583824 ccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttg 583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 3418512 - 3418673
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || |||| |||||||||||||||||  | |||||||||||| ||||| |||||||||||| |||||||| |||   |||||||    
T  3418512 ctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaa 3418611  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| || ||||||| ||||||| | ||||||||||| ||||||||| |||||||    
T  3418612 cccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaacttg 3418673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 8997543 - 8997704
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||| || |||||||||  |||||||||||| ||||||| | |||||| || ||||||||||| | |||||||||    
T  8997543 ctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaa 8997642  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||||||||| | |||| ||| ||| ||| |  ||||||||||||||||||||||||||||    
T  8997643 cacggtattccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaacttg 8997704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 43027416 - 43027255
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||| ||| ||| ||| ||||||||| |||||||||||||    
T  43027416 ctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaa 43027317  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| |||||||||  ||| ||  | ||| |||||||||||| |||| |||||||    
T  43027316 cccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttg 43027255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 10535403 - 10535563
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||| ||||||||   |||||||||| |||||||||||||||||||||| ||| |||| ||||||| |||||| ||||||||||  ||| |||     
T  10535403 ctttcgcaccagtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactggtcaagcggtgttcccctgaaaattgaac 10535502  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |  ||||||| |  ||||||| ||||||| | ||||||||||||||||||||| |||||||    
T  10535503 catgtattcctcggatacgtccttggaaggagctccttgccactggagtccaaacaacttg 10535563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 9859994 - 9860156
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| ||| |||||||||||||||||| ||||||||||||||  |||||||| |||||||||||  ||||||||||| |||||| |||||||||||||||    
T  9859994 cttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 9860093  T
Q  119 tccggtatt-ccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||| || |  ||||||| ||||||| | ||| |||||||||||  |||| |||||||    
T  9860094 cccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttg 9860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 16894046 - 16893887
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||||| ||||||| | |||||||||||||| |||||| || ||||||||    
T  16894046 ctttcgcaccggtttccga-ccaccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaa 16893949  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  ||||||||||||||| |  |||||||||||  || ||||||||||||    
T  16893948 cccgatattccccggatacgtcattggaaggagttccttgccactatagcccaagcaacttg 16893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 14846686 - 14846526
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||  | |||||||||||||||||| |||||| |||| | ||||||||||| ||||||||     
T  14846686 ctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcccctgagaatcgaac 14846587  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| |   |||||| || |||| | || ||||||| ||||| |||| |||||||    
T  14846586 ccggtattccccgggtacgtccttagaaggagcttcttgccagtggagcccaaacaacttg 14846526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 17981552 - 17981392
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||||||  |||||||| ||| | ||||||||| ||| ||||||||||||||  |||||| |||| |||||| |||||||||||||||    
T  17981552 ctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaa 17981453  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     |||||||| | |   ||| || ||||||| | |||||||||||||||| |||||||||||    
T  17981452 cccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 38922457 - 38922579
Alignment:
Q  64 ggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    ||||| |||||| ||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |   |||||| ||||||| | |||||||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 38922556  T
Q  163 tggagtccaagcaacttgattgt 185  Q
    ||||| |||||||||||| ||||    
T  38922557 tggagcccaagcaacttggttgt 38922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 2964187 - 2964026
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| |||||||| ||| || ||||||||||||||  || ||||||||||||||||| | | |||||||||    
T  2964187 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcgaa 2964088  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||||||||| |   |||||  ||||||| | || ||||||||| ||||||||||||||||    
T  2964087 cacggtattccccgggtacgttcttggaaggagctacttgccactagagtccaagcaacttg 2964026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 18374121 - 18374013
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||| |||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  18374121 cttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaa 18374022  T
Q  119 tccggtatt 127  Q
     | ||||||    
T  18374021 cctggtatt 18374013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 3568005 - 3567856
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattc 128  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||| ||| ||||||| |||| |||||| |||||  || |||||||||||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaagtgttgttcccccttagattcgaatccggtattc 3567906  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||  || ||  ||| |||||||| |||||||||||||  |||||||||||    
T  3567905 --caggtatgtttttgaaagaaacttcttgccactggagctcaagcaacttg 3567856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 33401799 - 33401958
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| ||||||  ||||||| |||||||| |||||||| || ||||||||||||||||||  |||||| |||| |||||| ||||||  |||||||    
T  33401799 ctttcgcatcggtttt-gatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaa 33401897  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     |||||||||| | | |||||| ||| ||| | |||||||||||||||| |||| ||||||    
T  33401898 cccggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 11786021 - 11785867
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggt 124  Q
    |||||||||||||||||| ||||| ||  ||| ||||  ||||||||||||||||||||  ||||| |||| ||||| |||||| |||||||||||||||    
T  11786021 gcaccggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgttgctccccttggaatcgaatccggt 11785922  T
Q  125 attccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||| |   |||||| ||||||  | ||||||| |||||||| ||| ||||||||    
T  11785921 attccccgggtacgtccttggaatgagctccttg-cactggagcccatgcaacttg 11785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 44893277 - 44893438
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| |||||||||||||| ||| ||| ||||  ||| |||| |||||| ||||||||||||||  |||||||||||| ||||| ||||| | ||| |||    
T  44893277 cttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaa 44893376  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||||||| |||| |||||||    
T  44893377 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttg 44893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 34710566 - 34710730
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||| || ||||| ||| ||||||| | |||||||||| | || ||  || ||| ||||||| ||||| |||||| |||||| |||||||||||||||    
T  34710566 ctttcggactggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaa 34710665  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |||||||||   | | |||||| |||||||||||| |||||||| |||| |||| ||||||||||    
T  34710666 tccggtattttccgagtacgtccttggaagaaacttcttgccaccggagcccaaacaacttgatt 34710730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 36662515 - 36662388
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| ||||||||||||||  ||| ||||||||||||| ||| |||| |||||||||||| |||||||| |||  |||||||||||  |||||||     
T  36662515 ctttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattgttcccctgaaaatcgaac 36662416  T
Q  120 ccggtattccacaaatacgtcattggaa 147  Q
    ||| |||||| |  ||||||| ||||||    
T  36662415 ccgatattcctcgtatacgtccttggaa 36662388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 6042904 - 6042822
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattcc 129  Q
    ||||| |||||||| ||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  6042904 ggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattcc 6042822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 11298266 - 11298352
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    ||||||||||||||||||| ||||||||||||  ||| ||||| ||||||||| |||||||||| |||||||| ||| |||||||||    
T  11298266 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactggctaagtgttgttccc 11298352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 7673657 - 7673813
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    |||||||||||||| |||||||| |||| ||| |||  ||| |||||| ||||||||||||||  |||| ||||| |||||||||||    |||||||      
T  7673657 tttcgcaccggttttcgatccactaaagatgggcgaaaaatccggctcgtgcgtagaggcatgcacactagccaaacgttgttcccc--ctaatcgaact 7673754  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||| || ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  7673755 tgatattccccagatacgtccttggaaggagctccttgccactggag-ccaagcaacttg 7673813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 17845841 - 17845683
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||   ||  |||||||||| ||| ||||| |||||| |||||||||||||||||| ||     
T  17845841 ctttcgcaccggtttccgacccaccaa-ggtgggcgattaattaaacttgtgcgtagaggaatgtgcactagccaagtgttgttcccctgggaatc-aaa 17845744  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || ||||||| | | ||| || ||||||| | ||| |||||||||||| |||| |||||||    
T  17845743 ccagtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaacttg 17845683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 26571035 - 26570948
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||| || ||||||||||  || |||||||||||||||||| ||||||||||||||| ||||   ||||||||||||||||||||||    
T  26571035 ctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttcccc 26570948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 30903393 - 30903286
Alignment:
Q  73 gtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
    |||| |||||| ||||||| ||||| ||||| |||||  |||||||||||||||||| | |||||||||||||||||| |||||| | |||||||  |||    
T  30903393 gtagcggcatgcgcactggtcaagcattgtttccctgaaaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgcaa 30903294  T
Q  173 gcaacttg 180  Q
     |||||||    
T  30903293 acaacttg 30903286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 38236016 - 38235854
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||| ||| |||||||| | |||||||  |||| |||||||| | |||| ||| ||||  |||| ||| ||||||||| |||||  | ||||||||||||    
T  38236016 ctttagcatcggtttccaacccaccaacagtgggcgactaatcccgctcgtgcatagaatcatgtgcaatggccaagcattgttttctctgggaatcgaa 38235917  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttga 181  Q
    ||||||| | | ||  |||||| |||||||||  ||||||||||||||| |||||||||||||    
T  38235916 tccggtacttcccaggtacgtccttggaagaagttccttgccactggagcccaagcaacttga 38235854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 68097 - 68261
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||| |||||||||||||| ||| |||||||| |||| |||| |||||| || ||| |||||||   ||||||||| ||||||||| |||| ||||||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaa 68196  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     ||| | |||| | |  ||||| ||||||| | ||||||||||| ||||  ||| ||||||||||    
T  68197 cccgatcttccccgagcacgtccttggaaggagctccttgccaccggagctcaaacaacttgatt 68261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 23895679 - 23895595
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||||| |||||||| ||| ||||||||||||| |||| |  ||| |||||||||| ||| ||||||||||||||||||||    
T  23895679 ctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttc 23895595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 24938568 - 24938644
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||| ||| || ||||| ||||||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtt 24938644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 33935768 - 33935844
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattcc 129  Q
    |||||||| || |||||||||| ||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  33935768 cgactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattcc 33935844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 16291202 - 16291289
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||| ||||||||| ||| ||||||||||||  |||||||| | |||||||| |||||||||| | |||||||||| ||||||||||    
T  16291202 ctttcacaccggttttcgacccaccaaaggtgagcgactaatccagctcatgcatagaggcatgtgtactggccaagtgttgttcccc 16291289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 13357960 - 13358042
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||||||||||||| |||| ||||| ||||||||||| |||||| ||| ||||||||||  || ||||||| |||||||||||    
T  13357960 gcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttcccc 13358042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 18091485 - 18091351
Alignment:
Q  46 aaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattgg 145  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||||||| ||| |||||||   ||| |||| ||||  |||||| |||   | |||| ||||    
T  18091485 aaggtgggcgactaattcgcctcgtgcgtagaggcatgcgcactggtcaaacgttgtttttctgagaattgaatttggtatttcacgggtgcgtccttgg 18091386  T
Q  146 aagaaactccttgccactggagtccaagcaacttg 180  Q
    || || |||||||||||||||| |||| |||||||    
T  18091385 aataagctccttgccactggagcccaaacaacttg 18091351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 22810161 - 22810030
Alignment:
Q  47 aggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattgga 146  Q
    |||| ||||||||||  |||||||||| |||  |||| |||||| |||||||||||||||| |||||||||| ||| | |||  |  ||||||| |||||    
T  22810161 aggtagacgactaatctggctcatgcgaaga--catgcgcactgaccaagcgttgttccccagggaatcgaacccgatgttctccggatacgtccttgga 22810064  T
Q  147 agaaactccttgccactggagtccaagcaacttg 180  Q
    || | |||||||||||| ||| |||| |||||||    
T  22810063 aggagctccttgccactagagcccaaacaacttg 22810030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 22958864 - 22958754
Alignment:
Q  37 gatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattccacaaat 135  Q
    |||| |||||||||||||||||||| |||||||||| ||||| ||||  ||||| |||||| |||||||| |||  |||||||| || |||||||||  |    
T  22958864 gatctaccaaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttccctctgaaaatcgaattcgatattccacaggt 22958765  T
Q  136 acgtcattgga 146  Q
    ||||| |||||    
T  22958764 acgtccttgga 22958754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 3692944 - 3692864
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgtt 100  Q
    |||||| |||||||| ||| | |||||||||| |||| |||||||||||||||||||||| ||| |||||| |||| ||||    
T  3692944 ctttcgtaccggttttcgacctaccaaaggtgaacgattaattcggctcatgcgtagaggtatgcgcactgaccaaacgtt 3692864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 28333114 - 28333039
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattcc 129  Q
    |||||||||| |||||| ||||||| |||| ||||||| |||||||| ||||| ||||||||||||  ||||||||    
T  28333114 cgactaattcagctcatacgtagagacatgcgcactggtcaagcgttattcccttgggaatcgaatttggtattcc 28333039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 29933849 - 29933723
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||| |||||||| ||||||||||||  |||||| |||| ||||||| |||||||||||||| || ||||||  |  |||| |  || |||| | |    
T  29933849 cgactaatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaa-cccgtattctccggatacattcttagaaggagc 29933751  T
Q  153 tccttgccactggagtccaagcaacttg 180  Q
    |||||||||||||||||||| |||||||    
T  29933750 tccttgccactggagtccaaacaacttg 29933723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 34846874 - 34846764
Alignment:
Q  70 tgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagt 168  Q
    ||||||||||||||   |||||||||||||||||| || ||||||||||| |||||||||| |   |||||| ||||||  | ||||||||||||||||     
T  34846874 tgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattcc-cgggtacgtccttggaatgagctccttgccactggagc 34846776  T
Q  169 ccaagcaacttg 180  Q
    |||| |||||||    
T  34846775 ccaaacaacttg 34846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 3379812 - 3379881
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactg 90  Q
    |||||||||| ||||||| |||||||| ||||||||||||| || ||||||| ||||||| || ||||||    
T  3379812 tttcgcaccgatttccgacccaccaaaagtggacgactaatccgactcatgcatagaggcgtgcgcactg 3379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 6940668 - 6940508
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||| || |||||||| | |||||||||||||| |||||||||| |||||| ||| | | ||| ||||| ||||||||||||||| ||||| |||||||    
T  6940668 ctttcacatcggtttcctacccaccaaaggtggatgactaattcgactcatgtgta-aagtatgcgcactagccaagcgttgttccacctggaaatcgaa 6940570  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| ||||   |  |||| || ||||||  | |||||| ||||||||| |||| |||||||    
T  6940569 cccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaacttg 6940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 8586981 - 8587025
Alignment:
Q  63 cggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  8586981 cggctcatgcgtagaggtatgcgcactggccaagcgttgttcccc 8587025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 43349327 - 43349471
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattcca 130  Q
    ||||||| ||| ||| ||||  |||||||| |||||| || ||||||| |||  ||||||| |||||||||| ||||| | ||| ||||||| |||| |     
T  43349327 tttccgacccatcaagggtgagcgactaatccggctcgtgagtagaggtatgaacactggcaaagcgttgttccccctagaaattgaatccgatatttcc 43349426  T
Q  131 caaatacgtcattggaagaaactccttgccactggagtccaagca 175  Q
    |||||||||| ||| ||  | ||||||||||| | ||||||||||    
T  43349427 caaatacgtctttgaaatgagctccttgccaccgaagtccaagca 43349471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 22212514 - 22212600
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactgg-ccaagcgttgttcc 105  Q
    ||||||||||||||| ||| ||||||||||||  |||||||| |||| | |||||||| ||||| | ||||| | ||||||||||||    
T  22212514 ctttcgcaccggttttcgaaccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcgtactggtcaaagcgttgttcc 22212600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 4772054 - 4772091
Alignment:
Q  24 cgcaccggtttccgatccaccaaaggtggacgactaat 61  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4772054 cgcaccggtttccgacccaccaaaggtggacgactaat 4772091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 27976002 - 27975885
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| ||||| | || |||| |||||||| ||| |||| ||||||| |||||||||||||  |||||  |||| ||||||||  ||||||||||||    
T  27976002 ctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaa 27975903  T
Q  119 tccggtattccacaaata 136  Q
     ||  |||||| ||||||    
T  27975902 cccaatattcctcaaata 27975885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 28033271 - 28033154
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| ||||| | || |||| |||||||| ||| |||| ||||||| |||||||||||||  |||||  |||| ||||||||  ||||||||||||    
T  28033271 ctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaa 28033172  T
Q  119 tccggtattccacaaata 136  Q
     ||  |||||| ||||||    
T  28033171 cccaatattcctcaaata 28033154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 993299 - 993236
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    ||||||||||| |||| || |||||||||||||||||||||| |  ||||| ||||||| ||||    
T  993299 ctttcgcaccgatttctgaaccaccaaaggtggacgactaatccaactcatacgtagagacatg 993236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 34613820 - 34613930
Alignment:
Q  63 cggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgcca 161  Q
    |||||||||  |||||||||| | ||||||||  ||||||||| ||||||||||||| ||| |||||| |  |||||   ||||||| | ||| ||||||    
T  34613820 cggctcatgtatagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgcca 34613919  T
Q  162 ctggagtccaa 172  Q
    |||||| ||||    
T  34613920 ctggagcccaa 34613930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 42123341 - 42123411
Alignment:
Q  113 atcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |||||||| |||||||  |  |||||||||| |||| |||||| || ||||||||||||| ||||||||||    
T  42123341 atcgaatctggtattcaccggatacgtcatttgaaggaactccatgtcactggagtccaaacaacttgatt 42123411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 25848276 - 25848211
Alignment:
Q  31 gtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaag 96  Q
    |||| ||| ||| |||||||||||||||| | || ||||||||||||| |||| |||||| |||||    
T  25848276 gttttcgacccagcaaaggtggacgactagtccgactcatgcgtagagacatgtgcactgaccaag 25848211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 39969914 - 39969983
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcact 89  Q
    |||||||| |||||||||||||| ||| | ||| ||||||||  | |||||| ||||||||||| |||||    
T  39969914 ctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatgtgtagaggcatgcgcact 39969983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 9395910 - 9395978
Alignment:
Q  112 aatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||| |||||| || |||| || ||| ||  | ||| |||||||||||||||||||||||||    
T  9395910 aatcgaatccgatattccccagatacatccttgaaatgagctcattgccactggagtccaagcaacttg 9395978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 21174215 - 21174167
Alignment:
Q  56 actaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||| ||||| |||||||||| |||| |||||| |||||||||||||    
T  21174215 actaatccggctgatgcgtagagccatgcgcactgaccaagcgttgttc 21174167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 8e-51; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 48804793 - 48804632
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  48804793 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaa 48804694  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  48804693 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 48804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 10047875 - 10048036
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| || |||||||||||| |||||| |||||||||||||||    
T  10047875 ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaa 10047974  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  10047975 cccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttg 10048036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 17748381 - 17748542
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||| |||||||||||||||||| |||||| | |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  17748381 ctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 17748480  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| ||||||||| || ||||||||| ||| |||| |||||||    
T  17748481 cccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaacttg 17748542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 1797570 - 1797406
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| |||||||||| ||||||| ||||| |||||||||| | |||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  1797570 cttttgcaccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaa 1797471  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| |||||||||||||||    
T  1797470 cccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaagcaacttgatt 1797406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 43861971 - 43862132
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  43861971 ctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaa 43862070  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| || ||||||| ||||||  | ||||||||| || ||| |||| |||||||    
T  43862071 cccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttg 43862132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 27875088 - 27875247
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaat 119  Q
    |||||||||||||| ||| |||| ||||||||||||||||| || |||||||||||||||||| |||||||||||| ||| || ||||||||||||||||    
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaat 27875187  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| || ||||||| ||||||| | || ||||||||||||| |||| |||||||    
T  27875188 ccggtattccccagatacgtc-ttggaaggagctacttgccactggagcccaaacaacttg 27875247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 38578866 - 38578976
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 38578965  T
Q  119 tccggtattcc 129  Q
     ||| ||||||    
T  38578966 cccgatattcc 38578976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 1606051 - 1605890
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  1606051 ctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaa 1605952  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||  |   |||||| ||||||| | ||||||| || |||||||||| |||||||    
T  1605951 ccaggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaaacaacttg 1605890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 13095968 - 13095807
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| |||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||    
T  13095968 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaa 13095869  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||| ||| | ||||||||||| |||| ||||||||||||    
T  13095868 cccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttg 13095807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 22993366 - 22993527
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||  |||||||| ||| || ||||||||||||||  |||||||||||||||||||| ||| |||||||||    
T  22993366 ctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 22993465  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |   |||||| ||||||| | |||||||||||||||||||||||||||||    
T  22993466 cccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttg 22993527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 21530858 - 21530697
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||| |||||||||||| ||||||||||||  ||| ||||||||||| |||||||||||||| |||||| ||||| |||||| |||||||||||| ||    
T  21530858 ctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaa 21530759  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| ||  |||||| ||||||| | |||||||||||||||| | ||||||||||    
T  21530758 cccagtattccccaggtacgtccttggaaggagctccttgccactggagccgaagcaacttg 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 43346778 - 43346939
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||| ||||||||| ||||||||| ||  |||||||| |||||| | |||||||||||| |||| ||||||| |||||||||| || |||| |||    
T  43346778 ctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaa 43346877  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| || ||||||| ||||||| | ||||||||||||||||||||| |||||||    
T  43346878 cccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttg 43346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 36619273 - 36619417
Alignment:
Q  40 ccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacg 138  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  |||||| |||| |||||| ||||||||||||||| |||||||||| ||||||||    
T  36619273 ccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacg 36619372  T
Q  139 tcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    || ||| ||| |  ||||||||||| ||||||||  |||||||||    
T  36619373 tccttgcaaggagttccttgccactagagtccaaataacttgatt 36619417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 18785777 - 18785618
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatc 120  Q
    ||||||||||||||||| |||||| ||||| ||||||||| | | ||||||||||||||||| |||||||||||| |||||| ||||| ||||||||| |    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||| |   |||||| ||||||| | || ||||||||||||| ||| ||||||||    
T  18785677 cggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaacttg 18785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 4195201 - 4195362
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||| | ||||||| |||||||| ||||| ||||||||||||||||||||| ||||| |||||  |||||||| ||||| |||||||    
T  4195201 ctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaa 4195300  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||||||||| |  ||||||| |||| || | |||||||||||||||| ||||||||||||    
T  4195301 ctcggtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaacttg 4195362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 22974077 - 22973916
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||| |||||||| || ||||||||||||||||||||||  |||||||||||||| |||||  |||||||||||||||||| |||||| ||||||||    
T  22974077 ctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaa 22973978  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | | |||||| ||||||| | ||||| |||| | ||| |||| |||||||    
T  22973977 cccggtattccccgagtacgtccttggaaggagctcctcgccattagagcccaaacaacttg 22973916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 42210261 - 42210422
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||| |||||  || |||| |||||| |||||||||||||| ||||||||||| ||||| || | ||||||||||||    
T  42210261 ctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaa 42210360  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||  | |||||||||||||||||| ||||||||||    
T  42210361 gccggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaacttg 42210422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 43925622 - 43925461
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||| || ||||||| |||||| |||||||  || |||||| | ||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  43925622 ctttcacatcggtttctgatccatcaaaggtaaacaactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 43925523  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||||||| ||||||||||||    
T  43925522 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 43925461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 47341986 - 47341825
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||| ||||||| ||||||| |||| ||||| ||| | |||| |||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  47341986 ctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 47341887  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||||||||| |   |||||| ||||||  | |||||||||||||||| ||||||||||||    
T  47341886 ctcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttg 47341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 5039422 - 5039578
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccgg 123  Q
    |||||||||| ||||||||||||||||  |||||||| ||||||||||||||||| ||| |||||| ||||| |||||||| ||| |||||||||  |||    
T  5039422 gcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcgg 5039521  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||| | ||||| ||  |||||| | |||||||||||||||| |||| |||||||    
T  5039522 tattccccgaatacatctatggaaggagctccttgccactggagcccaaacaacttg 5039578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 5069814 - 5069978
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||||||||| |||||||| |||||  ||||||||||||||  |||| || |||||||||||| ||||| |||||||    
T  5069814 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaa 5069913  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||| | |   |||||| || |||||| |||||||||||||||| |||| ||||||||||    
T  5069914 cccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttgatt 5069978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 26423288 - 26423447
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaat 119  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||     
T  26423288 tttcgcaccggtttccga-ccaccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||     |||||| ||||||| |  | ||||||||||||| |||| |||||||    
T  26423387 ccggtattccttgggtacgtccttggaaggagtttcttgccactggagcccaaacaacttg 26423447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 27028389 - 27028228
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||  |||||||| | ||||||| ||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 27028290  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||| | ||  |||||  ||||||  | ||||||||||| ||||||||| |||||||    
T  27028289 cctggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaacaacttg 27028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 34659336 - 34659175
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||| |||  |||||| ||||| |||||||| |||||| |||||||||||||| ||||||| ||||||||||||||| || ||||||||    
T  34659336 ctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaa 34659237  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   ||| ||  |||||| | |||||||||||||||| |||| |||||||    
T  34659236 cccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaacttg 34659175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 3353534 - 3353378
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||||||| |||||||||||  |||||| ||||| |||||||      
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccctgagaatcgatc 3353435  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaa 176  Q
    ||| ||||||  | ||||||| ||  ||  | ||||||||||||| || ||||||||    
T  3353434 ccgatattccctagatacgtccttataatgagctccttgccactgcaggccaagcaa 3353378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 19914726 - 19914862
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcatt 143  Q
    ||||||||| ||| ||||  |||||||||||||||||||| ||| |||||||||||||||||  ||||||||||| || |||||||  |  |||||| ||    
T  19914726 caaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcctttgggaatcgaacccagtattccttaggtacgtcctt 19914825  T
Q  144 ggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||| | |||||||||||||||| ||||||||||||    
T  19914826 ggaaggagctccttgccactggagcccaagcaacttg 19914862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 42032206 - 42032046
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||| ||| |||||||||| ||| ||||||||||| |||||||||||||||||||||| | ||| ||||||||||| ||||||||||| |||||||||||    
T  42032206 ctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaa 42032107  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     | |||||||| |   |||||| ||||||| | || ||||| ||||||| |||| ||||||    
T  42032106 ccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 39475050 - 39474888
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||| ||||| ||| |||| ||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||| | |||||||||    
T  39475050 ctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaa 39474951  T
Q  119 tccggtat-tccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||  || |  ||||||| ||||||  | |||||| ||||| |||||||| |||||||    
T  39474950 cccggtatacccccggatacgtctttggaaagagctccttaccactagagtccaaacaacttg 39474888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 39420947 - 39420787
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||| |||||||||||||  ||| ||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||  ||||| |||||    
T  39420947 cttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccctttgggattcgaa 39420848  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   ||| || ||| ||| | |||||||||||| ||| ||||||||||||    
T  39420847 -ccggtattccccgggtacctccttgaaaggagctccttgccactagagcccaagcaacttg 39420787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 48551967 - 48551883
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||| ||| ||||||| ||||||||    
T  48551967 ctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttc 48551883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 16802233 - 16802066
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||| ||||| |||| ||| ||||||| ||||  |||||||| |||||| |||||||||||||  ||||||||||| ||||||||| |||  ||||||||    
T  16802233 cttttgcaccagttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaa 16802134  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgattgtt 186  Q
    ||||||||||| |   |||||| ||||||| | ||| |||||||||||| ||| |||||||| |||||    
T  16802133 tccggtattccccgggtacgtccttggaaggagctcattgccactggagcccaggcaacttggttgtt 16802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 29805439 - 29805598
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||| |||||||||  ||| |||||| ||||| ||||| ||||||||||||||| |||| |||||| |||| |||||||||| |  ||||||||     
T  29805439 ctttcgcactggtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgttcccatatgaatcgaac 29805538  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     ||||||||  | |||||||| ||| ||| | |||||| |||||||||||||| ||||||    
T  29805539 tcggtattctccgaatacgtccttgaaaggatctccttaccactggagtccaaacaactt 29805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 41945583 - 41945497
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    ||||||||||| |||||||  ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccc 41945497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 14650427 - 14650266
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| | | ||||||||||||  |||||||  ||||||||||||||||||||  ||||||| ||||| ||||||| ||||| |||||||    
T  14650427 ctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaa 14650328  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||  |   |||||| ||||||| | |||||||||||| |||||||| |||||||    
T  14650327 cccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttg 14650266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 22573922 - 22573762
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||| | | ||| ||| | ||||||| |||| ||||||||||||| ||||||| ||||||| |||  ||||||||||||  |||||||     
T  22573922 ctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcgaac 22573823  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| |||||| | ||||  || ||||||||| || ||||| ||||||| ||||||||||||    
T  22573822 ccgatattcccccaatatatctttggaagaagcttcttgctactggagcccaagcaacttg 22573762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 4228759 - 4228911
Alignment:
Q  26 caccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggta 125  Q
    ||||| ||| ||| ||| ||| ||||| |||||||| |||||||||||||| |||||| ||||||||||| |||||||  ||||| ||||||| | ||||    
T  4228759 caccgattttcgacccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt--cctggaaatcgaacctggta 4228856  T
Q  126 ttccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||| |  ||||||| ||||||| | ||||||||| |||||| |||| |||||||    
T  4228857 ttcctcggatacgtccttggaaggagctccttgccgctggagcccaaacaacttg 4228911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 45697189 - 45697298
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||| || ||||||||| |||||||||||||||||||||  |  |||||||||||||||||| ||||||  |||| |||||||||||| |||||||||    
T  45697189 ctttcgtactggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgagaatcgaat 45697288  T
Q  120 ccggtattcc 129  Q
    | | ||||||    
T  45697289 ctgatattcc 45697298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 48244355 - 48244476
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||   ||||||  ||||| ||||||||| | | ||| |||    
T  48244355 ctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaa 48244454  T
Q  119 tccggtattccacaaatacgtc 140  Q
     |||||||||| ||||||||||    
T  48244455 cccggtattccccaaatacgtc 48244476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 45960007 - 45960162
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccgg 123  Q
    |||||||||||||||||| ||||||||  |||||||| ||||| ||||||||||||||| |||||| ||||| |||||| ||| |||||||| ||  |||    
T  45960007 gcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcgg 45960106  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||| |  ||||||| ||||||  | |||||||| |||||||  ||| |||||||    
T  45960107 tattcc-ccgatacgtccttggaaagagctccttgctactggagctcaaacaacttg 45960162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 8734685 - 8734772
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  ||||| ||||| |||||||| |||||| |||||| |||||||||    
T  8734685 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccc 8734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 10317745 - 10317854
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||||||||||||||||  ||||||| || ||| |||| |||||||||  |||||| ||||| ||| || |||||||||||||||    
T  10317745 ctttcgcaccggtttccgatccaccaaaggtgagcgactaa-tctgcttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaa 10317843  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  10317844 cccggtattcc 10317854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 11607187 - 11607077
Alignment:
Q  73 gtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
    |||||| |||| |||||||  ||| |||||||||| | |||||||||||| |||||| | |||||||| ||||||| |  ||||||||||||||| ||||    
T  11607187 gtagagtcatgtgcactggttaagtgttgttccccagagaatcgaatccgatattccccgaatacgtccttggaaggagttccttgccactggagcccaa 11607088  T
Q  173 gcaacttgatt 183  Q
    |||||||||||    
T  11607087 gcaacttgatt 11607077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 49142668 - 49142778
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||  ||| ||| ||| ||||||||| | |||||| |||||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||    
T  49142668 ctttcgcaccaattttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaa 49142767  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  49142768 cccggtattcc 49142778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 4973130 - 4973270
Alignment:
Q  41 caccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgt 139  Q
    |||||||| |||||||||||| |||||| | |||||||||||| ||| ||| |||| ||| |||||| | ||||||||| ||| |||||| | |||| ||    
T  4973130 caccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagt 4973229  T
Q  140 cattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | ||||||||| ||||||| || ||||| |||| |||||||    
T  4973230 ccttggaagaagctccttgtcagtggagcccaaacaacttg 4973270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 24969325 - 24969484
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||| ||||| ||  ||| |||| || ||  | |||||||||| | |||||||||||| ||||||||| ||| |||||||     
T  24969325 ctttcgcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgttccc-tggaaatcgaac 24969423  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||   || ||||||| ||| || || |||||||||||||||| |||| |||||||    
T  24969424 ccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 28396166 - 28396246
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||| ||||  || ||||||||||||||    
T  28396166 accggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttcccc 28396246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 22268040 - 22268189
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||||||||||||||||  ||||||||    ||        ||| |||| |||||||||||  |||||||||| |||||||||||    
T  22268040 ctttcgcaccggtttccgatccaccaaaggtgagcgactaat----ct--------gagtcatgcgcactggccaaatgttgttccccctgggaatcgaa 22268127  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| ||| |||||| ||||||  | |||||||||||||||| |||| |||||||    
T  22268128 cccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaacttg 22268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 23658289 - 23658202
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||| |||| |||||| || ||||||||| |||||||||||| |||||| || |||||||||||  ||||||||||||||||||||||    
T  23658289 cttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttcccc 23658202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 28744272 - 28744185
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||| |  ||||||| ||| | ||||||||||| |||||||||    
T  28744272 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttcccc 28744185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29152050 - 29151889
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||| ||| ||| ||||| |||| ||| || || ||||||||||| ||||||| ||| ||||||||  |||||||||||||    
T  29152050 ctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaa 29151951  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| ||  ||||||  || ||| ||||| ||| |||| ||| |||| |||||||    
T  29151950 cccggtattcctcaggtacgtccatgaaaggaactcattgtcactagagcccaaacaacttg 29151889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 32769047 - 32768984
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    ||||| |||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||||    
T  32769047 ctttcacaccggtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatg 32768984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 4705983 - 4706141
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||| || |||||| ||||| |||||||||||||||||||| | |||| |||||||| ||||| | | |||| || ||||||| |||||   |||||||    
T  4705983 ctttcacatcggttttcgatctaccaaaggtggacgactaatccagctcgtgcgtagaagcatgcgtaatggctaaacgttgttccccctaaaaatcgaa 4706082  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaac 177  Q
     |  ||||| |  | ||||||||||||||| | ||||||||||| ||||||||| ||||    
T  4706083 ccatgtatttcctagatacgtcattggaaggagctccttgccaccggagtccaaacaac 4706141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 21190779 - 21190889
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| ||| ||||||  | ||| ||||||||  | ||| |||||||||||||| ||||| ||||||||||| ||| ||| |||||||||    
T  21190779 ctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaa 21190878  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  21190879 cccggtattcc 21190889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 24983417 - 24983487
Alignment:
Q  20 ctttcgcaccggtttcc-gatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcact 89  Q
    |||||||| |||||||| || ||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  24983417 ctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 365250 - 365089
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||| ||| ||||||  |||||   ||||||  |||||||||||||||||||| ||||||   |||||||||||| |||| ||||||||    
T  365250 ctttcgcatcggttttcgacccaccactggtgggtcactaatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaa 365151  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||  ||||||| | ||| || ||||| ||| ||||| ||||||    
T  365150 cccggtattcctcggatacgtttttggaaggagctctttaccactagagcccaaggaacttg 365089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 3603467 - 3603397
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactg 90  Q
    ||||||||||| ||||||| |||||||| ||| |||| |||| |||||| |||||||||||||| ||||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactg 3603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 30827378 - 30827292
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattcc 129  Q
    ||||||| |||||||||| |||||| |||||||||||||| | |||||||||| ||||||| |||||  ||||||| | ||||||||    
T  30827378 caaaggtagacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattcc 30827292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 37515031 - 37514945
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    ||||| ||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| |||| |||||| |||| ||||||||||    
T  37515031 ctttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttccc 37514945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 180
Target Start/End: Complemental strand, 45448072 - 45447919
Alignment:
Q  28 ccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtat 126  Q
    ||||||||||| |||| ||||||||  |||||||  | ||  || ||||||| ||| ||||| |||||||||||||| |||||| ||||||| | |||||    
T  45448072 ccggtttccgacccactaaaggtgggtgactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtat 45447973  T
Q  127 tccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | | |   |||||| ||||||| | |||||||||||| ||  ||||||||||||    
T  45447972 ttctcgggtacgtccttggaaggagctccttgccactagaacccaagcaacttg 45447919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 32823353 - 32823254
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| |||||||| ||| ||| |||   |||||||| |||||| |||||||||||||   ||| ||||||| |||||| |||||||||||||||    
T  32823353 ctttcgcacccgtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcgaa 32823254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 9685832 - 9685778
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagagg 79  Q
    |||||||||||| ||||| ||| |||||| ||||||| |||||||||||||||||    
T  9685832 gcaccggtttcctatccatcaatggtggatgactaatccggctcatgcgtagagg 9685778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 9814077 - 9813967
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggt 124  Q
    ||||||||||||||| || ||||| ||| |||||||| | |||| ||| |||  |||||  |||||||||  ||||||||| |||||||||||| || ||    
T  9814077 gcaccggtttccgattcatcaaag-tgggcgactaatccagctcgtgcatag--gcatgcacactggccatacgttgttccactgggaatcgaacccagt 9813981  T
Q  125 attccacaaatacg 138  Q
    ||||| ||||||||    
T  9813980 attccccaaatacg 9813967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14535398 - 14535317
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||| ||||| || ||| ||| ||||| |||||||| | |||| ||||||||||||||  ||||||||||| |||||||    
T  14535398 tcgcaccagtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttc 14535317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 20247197 - 20247329
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattgga 146  Q
    |||||||||||||| || | | | ||||||| |||| | |||| |||||||||||||||| || |||||||| | |||||||| ||| ||| || |||||    
T  20247197 ggtggacgactaatccgacccgtacgtagagacatgtgtactgcccaagcgttgttccccatgagaatcgaacctggtattcc-caagtacatccttgga 20247295  T
Q  147 agaaactccttgccactggagtccaagcaacttg 180  Q
    || | || ||||||||| || ||||| |||||||    
T  20247296 aggagcttcttgccactagattccaaacaacttg 20247329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 38989006 - 38988934
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaag 96  Q
    ||||||||||||| || ||||||||| ||  |||||||| ||| ||||||||||||||||| |||||| |||||    
T  38989006 tcgcaccggtttc-gacccaccaaagatgagcgactaatccggttcatgcgtagaggcatgtgcactgaccaag 38988934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 23060787 - 23060731
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtag 76  Q
    |||||||||||||||   |||||||||||||| ||||||||| || |||||||||||    
T  23060787 ctttcgcaccggttttttatccaccaaaggtgaacgactaatccgactcatgcgtag 23060731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 39230602 - 39230546
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||||||| |||||||||||  |||||| |||||| |||||||||| ||||||||||    
T  39230602 accggttttcgatccaccaatagtggacaactaatccggctcatgcatagaggcatg 39230546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 34127644 - 34127698
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgt 74  Q
    |||||||||||||||  || ||||||||||||| |||||||| |||||| |||||    
T  34127644 ctttcgcaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgt 34127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 41267932 - 41267986
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||||||||| ||| ||||||||||||||||||    ||||||||||||||||||    
T  41267932 cggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatg 41267986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 46414743 - 46414625
Alignment:
Q  62 tcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgcc 160  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||  |||| ||||||||   ||||||||||   |||||| ||  ||| | |||||||||    
T  46414743 tcggctcgtgcgtagaggcatgcgcattggccaagcgttattcatcctgagaatcgaacttggtattccacgggtacgtccttaaaaggagctccttgcc 46414644  T
Q  161 actggagtccaagcaactt 179  Q
    || |||| |||| ||||||    
T  46414643 acgggagcccaaacaactt 46414625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 12422155 - 12422126
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaagg 49  Q
    ||||||||||||||||||||||||||||||    
T  12422155 ctttcgcaccggtttccgatccaccaaagg 12422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 34127695 - 34127780
Alignment:
Q  96 gcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| ||| ||||||||| |||||||||| |   |||||| ||||||| |  ||||||||| ||||| ||||||||||||    
T  34127695 gcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttg 34127780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 48224730 - 48224890
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||  ||||| ||| ||||||||| || | |||||||| | ||||| ||||||  |||| ||||||  |||||||||||||| ||| ||| |||     
T  48224730 ctttcgcattggttttcgacccaccaaagatgaaggactaatttgactcatacgtagatacatgcgcactgatcaagcgttgttcccatggaaattgaac 48224829  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||    ||||||| ||||||  |||||||| ||||   |||||||| ||||||    
T  48224830 tcgatattccctggatacgtccttggaaagaactccttcccacataagtccaagtaacttg 48224890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 8e-51; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 21898759 - 21898598
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  21898759 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 21898660  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  21898659 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 21898598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 5253222 - 5253383
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  5253222 ctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 5253321  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||| ||||| ||||||||||||    
T  5253322 cccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttg 5253383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 6606096 - 6606257
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||  ||||||||||| |||||| |||||| ||||||||    
T  6606096 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaa 6606195  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||  | ||||||||||||    
T  6606196 cccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttg 6606257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 13036003 - 13036164
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||  |||||||||||||  |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||    
T  13036003 ctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaa 13036102  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| | |||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  13036103 cccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 14107357 - 14107518
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||   ||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  14107357 ctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaa 14107456  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| ||||||| | |||||||||||||||| |||| |||||||    
T  14107457 cccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttg 14107518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 3601195 - 3601031
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| || ||| ||||||| ||||||||||||||||||| |||||| ||||||||    
T  3601195 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaa 3601096  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||| | |||||||  ||||||  | ||| |||||||| ||| |||||||||||||||    
T  3601095 accggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagcaacttgatt 3601031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 3587944 - 3588104
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||||| | |||||||||||| ||||||| |||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  3587944 ctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaa 3588043  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     |||||||||  |  ||||||| |||||| ||||||||||||||| ||| |||| ||||||    
T  3588044 cccggtattctccggatacgtctttggaataaactccttgccacttgagcccaaacaactt 3588104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 29333138 - 29333298
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||     
T  29333138 ctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgttcccctggaaatcgaac 29333237  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||     |||||| ||||||| | ||| |||||||| ||| |||| |||||||    
T  29333238 ccggtattccctgggtacgtccttggaaggagctcattgccactagagcccaaacaacttg 29333298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 8611973 - 8612134
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| |||||||| ||| ||||||||||| |||||  |||||| ||||||||||||| ||| |||||||||    
T  8611973 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 8612072  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | ||||||||||||||||||||| |||||||    
T  8612073 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttg 8612134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8932772 - 8932611
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||| |||||||||  || |||| ||||||||||||||||||||| ||||| |||||| |||||| |||||||||||||||    
T  8932772 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8932673  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  |||| || ||||||| ||||||||||||||||||| ||| |||||||    
T  8932672 cccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttg 8932611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8944238 - 8944077
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||| |||||||||  || |||| ||||||||||||||||||||| ||||| |||||| |||||| |||||||||||||||    
T  8944238 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8944139  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  |||| || ||||||| ||||||||||||||||||| ||| |||||||    
T  8944138 cccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttg 8944077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 2271307 - 2271461
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggt 124  Q
    |||| |||||| || ||| |||||||||||||||||| |||||| ||||||||| |||| |||||||| |||||||||| | ||| |||||||| |||||    
T  2271307 gcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt-ctctgagaatcgaacccggt 2271405  T
Q  125 attccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||| | |||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  2271406 attccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 2271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8938822 - 8938661
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| || || ||||||| |||| |||||||| |||||||||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaa 8938723  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |  ||||||| |  ||| ||| ||||||| | ||||||| |||||||| |||| |||||||    
T  8938722 ccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttg 8938661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 19089609 - 19089448
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||  ||||||||||| |||||| |||||||||||| ||    
T  19089609 ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaa 19089510  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| |  ||||||| ||| ||  | |||||||| ||||||| ||||||||||||    
T  19089509 cctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttg 19089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 30788852 - 30789010
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||| ||| |||||||||| ||||||||||| ||||||| || || ||||| ||     
T  30788852 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt-ccatgagaatcaaac 30788950  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    ||| |||||| |  |||| || ||||||| | |||||||||||||| |||||||||||||    
T  30788951 ccgatattccccggatacatccttggaaggagctccttgccactggggtccaagcaactt 30789010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 29444764 - 29444925
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||  |||||||| ||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||    
T  29444764 ctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaa 29444863  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||| || |   |||||| ||||||| | |||||||||||| ||| ||||| ||||||    
T  29444864 cccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaagtaacttg 29444925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 9179735 - 9179896
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||| |||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||   ||||| |||| |||||| |||||||||||||||    
T  9179735 ctttcggaccgatttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaa 9179834  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||||     |||||| ||||||  | |||||||||||||||| |||| |||||||    
T  9179835 cccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttg 9179896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 9633624 - 9633708
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  9633624 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 34954618 - 34954760
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||  |||||||||||||||| ||| ||||||||||| ||||||| |||||| ||||||||    
T  34954618 ctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaa 34954717  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgcca 161  Q
     | |||||||| ||  |||||| ||||||| | ||||||||||    
T  34954718 cctggtattccccaggtacgtccttggaaggagctccttgcca 34954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 13469044 - 13468883
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||| | ||||||| ||||| ||||||||  ||||| |||||||||||||| |||||| |||| ||||||| ||||| ||||| |||    
T  13469044 ctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaa 13468945  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| |  ||||||| ||||||| | |||||||||||  ||| ||||||||||||    
T  13468944 cctggtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaacttg 13468883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 24671865 - 24672026
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||| ||||| ||||||| ||| |||||| |||| |||||| |||||  ||||||||||||||  |||||| |||| ||||||||| |||||||| |||    
T  24671865 ctttcacaccgatttccgaaccatcaaaggcggactactaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaa 24671964  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||  || ||||||| ||| ||| | |||||||||||||||| ||||||||||||    
T  24671965 cccggtattctccagatacgtccttgaaaggagctccttgccactggagcccaagcaacttg 24672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 12606541 - 12606431
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||||    |||||||||||| |||||||| |||||| |||||||||||||| ||||||||||| ||||||| ||||||| |||||||    
T  12606541 ctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 12606442  T
Q  119 tccggtattcc 129  Q
    || ||||||||    
T  12606441 tctggtattcc 12606431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 12635925 - 12635796
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||  |||| |||||||| |||||  |||||||||||||| ||||| ||||||||||| |||||||||||||| ||    
T  12635925 ctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaa 12635826  T
Q  119 tccggtattccacaaatacgtcattggaag 148  Q
     | |||||||| |  ||||||| |||||||    
T  12635825 cctggtattccccggatacgtccttggaag 12635796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 8149797 - 8149905
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||   |||||| ||| ||||||||| |    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatattgttctcctaggaatcgaacc 8149896  T
Q  121 cggtattcc 129  Q
    || ||||||    
T  8149897 cgatattcc 8149905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 19230578 - 19230717
Alignment:
Q  40 ccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgt 139  Q
    ||||||| | || ||||||||| |||||| ||||||||||||||   |||| ||||||||||||||| ||  |||||||||||||||||| | | |||||    
T  19230578 ccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttcccttgaaaatcgaatccggtattcc-cgagtacgt 19230676  T
Q  140 cattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | ||||||| | |||||||||||||||| |||| |||||||    
T  19230677 ccttggaaggagctccttgccactggagcccaaacaacttg 19230717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 15643840 - 15643988
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtat 126  Q
    |||||||| ||| |||| |||||||| |||||||| || |||||||||||    ||| ||| ||||| || |||||||||||| |||||||| ||| |||    
T  15643840 accggttttcgacccactaaaggtgggcgactaatccgactcatgcgtag----atgcgcattggcctagtgttgttcccctgtgaatcgaacccgttat 15643935  T
Q  127 tccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| || ||||||| ||||||  | |||||||||||||||| ||||||||||||    
T  15643936 tcc-cagatacgtccttggaatgagctccttgccactggagcccaagcaacttg 15643988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 176
Target Start/End: Original strand, 17114901 - 17115053
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccgg 123  Q
    |||||| ||||||| | | ||||||||| |||||||| |||||||||||||||||||||  || |||||||||||||||||  || |||||||||| |      
T  17114901 gcaccgatttccgacctatcaaaggtgggcgactaatccggctcatgcgtagaggcatgtccattggccaagcgttgttccttctaggaatcgaattcaa 17115000  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaa 176  Q
    |||||  ||  |||||| ||||||| | || ||||||||||||| ||||||||    
T  17115001 tattctccatgtacgtccttggaaggagcttcttgccactggagcccaagcaa 17115053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 9147379 - 9147248
Alignment:
Q  53 acgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaa 151  Q
    ||||||||| ||||| ||||||||||||||| ||||||| |||| || ||||||| ||||||||||| ||| |||||| ||  |||||| ||||||  |     
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgag 9147280  T
Q  152 ctccttgccactggagtccaagcaacttgatt 183  Q
    |||||| ||||||||| |||| ||||||||||    
T  9147279 ctccttcccactggagcccaaacaacttgatt 9147248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 14783419 - 14783482
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  14783419 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatg 14783482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 31129288 - 31129201
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||||||||||||||||||  ||||||||||| || ||||||  |||||||||||||||||||| ||||| ||||||||||| |||||    
T  31129288 ctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctcccc 31129201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 10311468 - 10311626
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||||||| |||| ||| ||||||| ||||  ||||||||    ||| ||||||||| |||| ||||||||||||||||||||||| || | ||||||    
T  10311468 ctttcgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaa 10311567  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaac 177  Q
     |||||||||| |  ||||||  ||||||| | |||||||| ||||||| |||||||||    
T  10311568 cccggtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaac 10311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 13584445 - 13584612
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggct----catgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaat 114  Q
    ||||||| ||||||||||| ||||||||||||||||| |||| |||||    ||||| |||||||||| ||||||||||| ||||||||  | | |||||    
T  13584445 ctttcgcgccggtttccgacccaccaaaggtggacgattaatccggctcatgcatgcatagaggcatgcgcactggccaaacgttgttcatcttaggaat 13584544  T
Q  115 cgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |||| | |||||||| | | |||||| ||||||| |  | ||||||||| |||  ||||||||||||||    
T  13584545 cgaacctggtattcctcgagtacgtccttggaag-agtttcttgccactagagcacaagcaacttgatt 13584612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 8888983 - 8888905
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    ||||| ||||||| |||||||||||||||||| || |||||||||||||| ||| ||||||||||| ||||||| ||||    
T  8888983 ggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtttccct 8888905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 32157167 - 32157252
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    |||| |||||||||| |||||||||||| |||| |||||||  |||||||||||||||| ||| ||||||| |||| |||||||||    
T  32157167 tttcacaccggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttccc 32157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 13391397 - 13391289
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| |||||||||| ||| |||  |||  ||| |||||||| |||||| |||||||||||||| ||||||||||| | |||||||||||  ||||||||    
T  13391397 cttttgcaccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcccctgaaaatcgaat 13391298  T
Q  120 ccggtattc 128  Q
    ||| |||||    
T  13391297 ccgatattc 13391289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 5029928 - 5029829
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||||||||| |||||||| ||| ||||| ||| |||||||| |  |||||||||||||||||| |||||| |||| |||||||| ||||| ||||||||    
T  5029928 ctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcgaa 5029829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 9366445 - 9366579
Alignment:
Q  42 accaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtc 140  Q
    ||||||||||| || ||||| |||||| |||||||||||||| |||||||||||||||| || |||||   ||||||| | | |||||| ||| ||| ||    
T  9366445 accaaaggtgg-cgtctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatc 9366543  T
Q  141 attggaagaaactccttgccactggagtccaagcaa 176  Q
     ||||||| | ||||||| |||||||| ||||||||    
T  9366544 cttggaaggagctccttgtcactggagcccaagcaa 9366579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 11142713 - 11142606
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaat 119  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||  | |||||||||||||||||| ||||||| ||| ||||| |||| ||| ||||||||     
T  11142713 tttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaac 11142614  T
Q  120 ccggtatt 127  Q
     |||||||    
T  11142613 tcggtatt 11142606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 30410556 - 30410457
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||||| ||  ||| |||| | ||||||||||||||||||| |||||||  ||| |||||||| |||| ||||||||    
T  30410556 ctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggttaagtgttgttcctcctgagaatcgaa 30410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 3030693 - 3030778
Alignment:
Q  96 gcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||||| ||||||||||| ||| ||||||  ||||||||| ||||||  | |||||||||||||||| |||| |||||||    
T  3030693 gcgttgttccccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttg 3030778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 14326108 - 14326045
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||| |||||| ||||||| ||||||||| ||  |||||||| |||||||||||||||||||||    
T  14326108 cttttgcaccgttttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatg 14326045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 14419118 - 14419055
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||| |||||| ||||||| ||||||||| ||  |||||||| |||||||||||||||||||||    
T  14419118 cttttgcaccgttttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatg 14419055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 21016799 - 21016911
Alignment:
Q  69 atgcgtagaggcatgggcactggccaagcgttgttcccctg-ggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
    |||| ||||||||||  ||||| | ||| ||||||| |||  ||||||||| |||||||||| |   ||||||  |||||| | ||||||||||||||||    
T  21016799 atgcatagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggag 21016898  T
Q  168 tccaagcaacttg 180  Q
     ||||||||||||    
T  21016899 cccaagcaacttg 21016911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 21945370 - 21945239
Alignment:
Q  50 tggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaag 148  Q
    ||||||| || | |||||||||| |||||||||  | ||||||||||||||||||||| | | |||  |||  | |||||  | |||||||  |||||||    
T  21945370 tggacgattattccggctcatgcatagaggcatacgaactggccaagcgttgttccccttagaaataaaatatgatattctccgaatacgttcttggaag 21945271  T
Q  149 aaactccttgccactggagtccaagcaacttg 180  Q
     | || ||||||| ||||||||||||||||||    
T  21945270 gagctgcttgccattggagtccaagcaacttg 21945239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 180
Target Start/End: Complemental strand, 33940098 - 33939961
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtcat 142  Q
    ||||| |||||||||||| |||||| || ||||||||||| ||| |||  |||  ||||||| |||| ||||| || || ||||||| |  ||||||| |    
T  33940098 caaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaatcaaacccagtattcctcggatacgtcct 33939999  T
Q  143 tggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||| | |||||| ||| ||||| | ||||||||||    
T  33939998 tagaagtagctcctttccattggagccaaagcaacttg 33939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 32048506 - 32048402
Alignment:
Q  76 gaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagc 174  Q
    ||||||||  ||||| |||| |||||||| |||||  ||||||||| | |||||| | | ||| || ||||||| | |||||| |||||||||||||| |    
T  32048506 gaggcatgcacactgaccaaacgttgttctccctgaaaatcgaatctgatattcctcgagtacatccttggaaggagctccttaccactggagtccaaac 32048407  T
Q  175 aactt 179  Q
    |||||    
T  32048406 aactt 32048402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 8e-51; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29895899 - 29895738
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29895800  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  29895799 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 29895738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 38075545 - 38075384
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  38075545 ctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaa 38075446  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||  | |||||||| ||||||| ||||||||||| |||||| |||| |||||||    
T  38075445 cccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaacttg 38075384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 2559419 - 2559258
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||  |||||||||||||| ||||||||||||||||||||| ||| | |||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaa 2559320  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||| ||  |||||| ||||||| | ||| |||||||||||| |||| |||||||    
T  2559319 tccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttg 2559258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 6779323 - 6779162
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| ||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||| |||||||||| | |||||| |||||||||||||||    
T  6779323 ctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaa 6779224  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||  ||  |||||| ||||||||| |||||||||||||||| |||| |||||||    
T  6779223 cccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaacttg 6779162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 43458725 - 43458564
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| ||||||||||  || |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||| |||| |||||||||||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaa 43458626  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| ||||||| |||||||||| ||||||  | || ||||||||||||| ||||||||||||    
T  43458625 tccagtattccccaaatacgtccttggaatgagcttcttgccactggagcccaagcaacttg 43458564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 53599172 - 53599011
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  53599172 ctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaa 53599073  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||| ||||| |||| |||||||    
T  53599072 cccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttg 53599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 40780861 - 40781024
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaat 119  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||     
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    ||| ||||   | |||||||| ||  ||||| |||||||||||||||| |||  ||||||||||    
T  40780961 ccgatattttccgaatacgtccttaaaagaagctccttgccactggagcccagacaacttgatt 40781024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 47078570 - 47078403
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||| ||||||||| ||||||| ||||  |||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  47078570 ctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 47078471  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgattgtt 186  Q
     |||||||||| |   |||||| ||||||| | |||||||||||||||  |||||||||||| |||||    
T  47078470 cccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttggttgtt 47078403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 1446910 - 1446777
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattgga 146  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||| |  ||||||| |||||    
T  1446910 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttgga 1446811  T
Q  147 agaaactccttgccactggagtccaagcaacttg 180  Q
    || | |||||||||||||||| ||||||||||||    
T  1446810 aggagctccttgccactggagcccaagcaacttg 1446777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 38166139 - 38165978
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| ||    
T  38166139 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaa 38166040  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| |  ||||||| ||||||| | |||||||||| ||||| |||| |||||||    
T  38166039 cccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttg 38165978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 24166562 - 24166401
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||||||| |||||||||  |||||||  ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||    
T  24166562 ctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaa 24166463  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| | | |||||| ||||||| | |||||||||||||||| |||| |||||||    
T  24166462 cccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttg 24166401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 52950194 - 52950033
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||||||||||||||||||  || ||||| |||||| |||| ||||||||||||||||||| |||||||||||||||    
T  52950194 ctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaa 52950095  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| ||  |||||| ||||||| | |||||||||||| ||| |||| |||||||    
T  52950094 cccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaacttg 52950033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 55921146 - 55920985
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||  ||| |||| |||||||| |||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  55921146 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 55921047  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   | |||| ||||||| | |||||||||||||||| ||||||||||||    
T  55921046 cccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttg 55920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 33647832 - 33647672
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaat 119  Q
    |||||||||||||||||||||||||||| || |||||||||  || || |||||||||| ||| ||||||| |||||||||||| |||||| |||||||     
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaac 33647733  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| || ||||||| ||| ||| | |||||||||||| ||| ||||||||||||    
T  33647732 ccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttg 33647672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 7246645 - 7246755
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaa 7246744  T
Q  119 tccggtattcc 129  Q
     || |||||||    
T  7246745 cccagtattcc 7246755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 36145214 - 36145362
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||||| |||||||||||||||||    
T  36145214 ctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaa 36145313  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
     |||||||||| |   |||||| ||||||  | ||||||||||| ||||    
T  36145314 cccggtattccccgggtacgtccttggaatgagctccttgccaccggag 36145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 8889128 - 8888973
Alignment:
Q  26 caccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggt 124  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||| |||||| ||||| ||||||||| |||||    
T  8889128 caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggt 8889029  T
Q  125 attccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||| |  ||||||| || |||| | ||||||||| || ||| |||| |||||||    
T  8889028 attccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttg 8888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 16450412 - 16450313
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  16450412 ctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 16450313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 42722576 - 42722726
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| ||| |||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtc 169  Q
     |||||||| | |   |||||| ||||||| | |||||  |||||||||||    
T  42722676 cccggtatttcccgggtacgtccttggaaggagctcctaaccactggagtc 42722726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 49260664 - 49260825
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||| |||||| ||||||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||    
T  49260664 cttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaa 49260763  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | | ||||||| |  |||| || ||||||| |  ||||||||| || | |||||||||||||    
T  49260764 ttcagtattccccggatacatccttggaaggagttccttgccattgaaatccaagcaacttg 49260825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 5472847 - 5473007
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||||| |||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| ||    
T  5472847 ctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaa 5472946  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     | |||||||| |  ||||||| ||| ||  | |||||||||||||||| |||| ||||||    
T  5472947 cctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaactt 5473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 4738730 - 4738631
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||||||| ||||| |||||||    
T  4738730 ctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcctcctggaaatcgaa 4738631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 6032643 - 6032803
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||| ||||||| |||||||    | ||||  ||| ||| |    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaagcgt--acctcctgaaaattgaacc 6032740  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    ||||||||| |   |||||| ||||||| | |||||||||||||||| |||||||||||||||    
T  6032741 cggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgatt 6032803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 295534 - 295695
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatcc 121  Q
    ||||||||||||||  | ||||||| ||||||||||||||  || || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||     
T  295534 ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcctctgggaatcgaatct 295633  T
Q  122 ggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |||||||| |  ||||||| || ||||    ||||||||||||||| |||| ||| ||||||    
T  295634 ggtattccccggatacgtccttagaaggtgttccttgccactggagcccaaacaatttgatt 295695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 41162893 - 41163042
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattcca 130  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||| |||||  ||||||||||| ||||||||| |||| |||||||  ||||||| |     
T  41162893 tttccgatccatcaaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcc 41162992  T
Q  131 caaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |  ||||||| ||||||| | ||||||| |||||||| ||||||||||||    
T  41162993 cggatacgtccttggaaggagctccttgtcactggagcccaagcaacttg 41163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 20128421 - 20128273
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||| ||||||||||||||   |||| |||||| ||||||| ||||||||||||| ||||| |||||| ||||||||    
T  20128421 ctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaa 20128322  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
     || ||||||| |  ||||||| ||||||| ||||||||||| ||||||    
T  20128321 cccagtattccccggatacgtccttggaaggaactccttgccgctggag 20128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 15839934 - 15840081
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||| ||||||| | | | |||||  || |||||||| ||||||||||||||||||||| ||||||||||| |||| |||  || |||||||||     
T  15839934 ctttcgcactggtttccaacctatcaaagaagggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattcttctaggaatcgaac 15840033  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
    |||||||||| ||| |||||| ||||||| | ||||||||||||||||    
T  15840034 ccggtattccccaagtacgtccttggaaggagctccttgccactggag 15840081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 17080155 - 17080068
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||| ||||||| ||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  17080155 ctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccc 17080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 36262766 - 36262912
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||  |||||| || ||||||||||||| |||||||| || ||| |||||||||||||| ||||||||||||||||||| ||||||||||||||     
T  36262766 ctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt-ccctgggaatcgaac 36262864  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
    |||||||||  |   |||||| ||||||| | || |||||||||||||    
T  36262865 ccggtattctccgggtacgtccttggaaggagcttcttgccactggag 36262912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 3574447 - 3574606
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    ||||| |||||||||||||  |||| ||||||  |||||||| || ||| |||||||||||||| |||||||||||| ||||||| |||||||||| |||    
T  3574447 ctttctcaccggtttccga--cacctaaggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaa 3574544  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      |||||||||  |  |||||| ||||||| | |||||||||||||||| ||||||||||||    
T  3574545 ctcggtattccctaggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 3574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 27248538 - 27248379
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||| |||| ||||| || | ||||||||||| ||||||||  ||||| |||||||||||||| ||  ||||||||||||||||| ||||||| |||||    
T  27248538 ctttcacaccagtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaa 27248441  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | ||| |||||||||||| ||||||||||||    
T  27248440 cccggtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaacttg 27248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 38168368 - 38168227
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||| | |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| | | |||||||||    
T  38168368 ctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcat-ggcactggccaagcgttgttcctcttaggaatcgaa 38168270  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgcca 161  Q
     | |||||||| |   |||||| ||||||| | ||||||||||    
T  38168269 cctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 43468459 - 43468349
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||| ||||| ||||||  ||||| |||||||| ||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaa 43468360  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  43468359 cccggtattcc 43468349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 48015072 - 48015182
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||||||||||||||||| ||||  ||| | |||||| |||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  48015072 ctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaa 48015171  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  48015172 cccggtattcc 48015182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 3507371 - 3507274
Alignment:
Q  31 gtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattc 128  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||| | ||||| |||||||||||||||| ||||||||||| ||| |||||    
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttcccttgggaatcgaacccgatattc 3507274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 14124128 - 14123967
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||| | ||||||| ||||  |||||||| |||||| || ||||||||||| |||||||||||  |||||| |||||||||||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa 14124029  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| ||| |||||  ||||||| | || ||||||| ||||| |||| |||||||    
T  14124028 cctggtattcctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaacttg 14123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 15732447 - 15732608
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||||||||||||| ||  ||||||||   || | |||||||||||||| |||||||||||| |||||||||| |  ||||||||    
T  15732447 ctttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaa 15732546  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||  |  ||||||| |||||||||  | ||||||||||||| |||| |||||||    
T  15732547 cccggtattctccggatacgtccttggaagaattttcttgccactggagcccaaacaacttg 15732608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 20532420 - 20532517
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattc 128  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||  ||||||||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattc 20532517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 30317345 - 30317200
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||  | |||||||||||||||||||| ||| ||||||||    
T  30317345 ctttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaa 30317246  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
     | | |||||| | | |||||| ||  ||| |||||||||||||||    
T  30317245 cctgatattccccgagtacgtccttaaaaggaactccttgccactg 30317200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 1940779 - 1940934
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatcc 121  Q
    |||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||   |||||||||||| ||||||||||||||| ||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 1940875  T
Q  122 ggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||| | |   |||||| ||||||| | |||||||||||| ||| |||| |||||||    
T  1940876 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttg 1940934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 13073649 - 13073489
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaat 119  Q
    |||||||||||||||||| |||||||||||  |||||||||  || ||||||||||||| ||| ||||||||||| | ||||||||| |||||||||||     
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaac 13073550  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||  ||  |||||| ||||||| | ||| |||||||| ||| |||| |||||||    
T  13073549 tcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaacttg 13073489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 20421885 - 20421722
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||| || ||||||||| ||| ||| | ||||||| ||||  |||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  20421885 ctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 20421786  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     || ||||||| || ||||||| ||| ||| | ||||||||||||| || |||||||||| ||||    
T  20421785 -ccagtattccccagatacgtctttgaaaggagctccttgccactgaagcccaagcaactagatt 20421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 7742036 - 7741879
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaat 119  Q
    ||||||||| |||| |||| |||||||| ||||||||||||  || || |||||||||||||| ||||||||||||||||||| |||||| || | |||     
T  7742036 tttcgcaccagttttcgattcaccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaac 7741937  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaac 177  Q
    ||| |||||| | |||||||  ||| ||| | |||||||||||| ||| |||||||||    
T  7741936 ccgatattcctcgaatacgtacttgaaaggagctccttgccactagagcccaagcaac 7741879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29588848 - 29588687
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||| || ||||||| ||||||| ||||||  |||||| |||||| |||||||||||||| ||||| ||||||| ||| |||||||||||||||||    
T  29588848 ctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaa 29588749  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||| | |    ||||| ||||||  | |||||||||||||||| |||| |||||||    
T  29588748 cccggtatttcccgggcacgtctttggaatgagctccttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 42722378 - 42722537
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||| ||| ||| ||||||  |||||||||||||| || ||||||| |||||| ||| ||||||| |||| |||||||||||||||||| ||     
T  42722378 ctttcgcaccgattttcgacccaccattggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcccctgggaatcaaac 42722477  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||||||||| |   ||| || ||| ||| | |||||  |||||||||||||| ||||||    
T  42722478 ccggtattccccgggtacatctttgaaaggagctcctctccactggagtccaaacaactt 42722537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 47682381 - 47682476
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatc 115  Q
    ||||||||||||||||||| ||||||||||||| |||||||  |||||| ||||||||| |||| ||||||||||| |||| |||||||| |||||    
T  47682381 ctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttattcccctgagaatc 47682476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 54525019 - 54524877
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattccacaaatacgtcat 142  Q
    |||||||||||||| |||| || ||||| || ||||||||  ||||||  ||||||||||||| |||||||||||||| |||||||   |||||||||||    
T  54525019 caaaggtggacgacaaattaggatcatgtgt-gaggcatgtacactggtaaagcgttgttccctctgggaatcgaatctggtattctctaaatacgtcat 54524921  T
Q  143 tggaagaaactccttgccactggagtccaagcaacttgattgtt 186  Q
    |||||| | ||| |||||||| ||| | ||||||||||||||||    
T  54524920 tggaaggagctctttgccactagagcctaagcaacttgattgtt 54524877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 10541127 - 10541018
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||  ||||| ||||||||||||||  |||||||||||||||| ||||||||| |||||||    
T  10541127 ctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaa 10541029  T
Q  119 tccggtattcc 129  Q
     ||| ||||||    
T  10541028 cccgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 3159468 - 3159577
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| |||||||||||||| ||||||| ||||  ||||||||  ||||| |||||||||||||| ||||||||||||||||||| ||||||| | |||||    
T  3159468 cttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaa 3159567  T
Q  119 tccggtattc 128  Q
     |||||||||    
T  3159568 cccggtattc 3159577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 15829811 - 15829650
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||||||||||| |||||||||| |||||| ||||||| |||||||||| |||| ||||| |||||||||||| |||| ||||||||  |||| ||    
T  15829811 ctttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatcaaa 15829712  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
       | |||||  |  ||||||| ||| ||||| ||||||| |||||||| |||| |||||||    
T  15829711 ctggatattctccggatacgtccttgaaagaagctccttgtcactggagcccaaacaacttg 15829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 178
Target Start/End: Original strand, 40272340 - 40272489
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattc 128  Q
    ||||||||| ||||||| |||| ||||| ||| || || ||||||||||||||| ||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  40272340 ggtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattc 40272439  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaact 178  Q
    | |  |||| |||||||||  | |||||| |||| |||| |||| |||||    
T  40272440 cccggatacatcattggaaagagctccttaccaccggagcccaaacaact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 24850626 - 24850770
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| ||||||||||||||  || |||||| || |||| | ||||||||||||||||||| ||||||| |||| ||||||||||||  ||| ||||    
T  24850626 ctttcgcatcggtttccgatccaataatggtggatgaataatccagctcatgcgtagaggcatgcgcactggtcaagtgttgttcccctgataattgaat 24850725  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
    | |||||| | |  ||||||| ||||||  | |||||||||||||    
T  24850726 ctggtatttcccggatacgtccttggaatgagctccttgccactg 24850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 26479957 - 26480109
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtatt 127  Q
    ||||||||||| || ||| | ||||||| |||||||||||||||||||||||||| | |||||||||| ||| |||||| |  ||||||||  |||||||    
T  26479957 cggtttccgattcatcaatgatggacgattaattcggctcatgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtatt 26480056  T
Q  128 ccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || ||  |||||  ||||||| | |||||||||| ||||| |||| |||||||    
T  26480057 ccccatgtacgtacttggaaggagctccttgccagtggagcccaaacaacttg 26480109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 31588798 - 31588635
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggcca--agcgttg-ttcccctgggaatcg 116  Q
    |||||||| ||||||||||||||||||| |||  |||||||| |||||||||||||||| |||| ||||||||||  ||||||| |||| |||||||||     
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatca 31588699  T
Q  117 aatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || ||  |||||| | |||||||| || |||  | ||||||| ||||| || |||| |||||||    
T  31588698 aacccaatattccccgaatacgtccttagaacgagctccttgacactgaagcccaaacaacttg 31588635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 48317279 - 48317435
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccgg 123  Q
    |||| ||||||| | ||| ||| ||||| |||||||| |||||| |||||||||||||   ||||| |||||||||||||| ||||  |||||||||| |    
T  48317279 gcactggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccag 48317378  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||   | |||||||||||||||  | ||| |||||||||||| ||||||||||||    
T  48317379 tatttttcgaatacgtcattggaatgagctctttgccactggagcccaagcaacttg 48317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 48834699 - 48834807
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||||||||||| | |||||||| || ||||||  |||||||||| ||||||||| ||  || ||||||||| |||||||     
T  48834699 ctttcgcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcctagtattattcccctggaaatcgaac 48834798  T
Q  120 ccggtattc 128  Q
    |||||||||    
T  48834799 ccggtattc 48834807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 16645230 - 16645120
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||| |||||| ||||||||  | |||||| |||||||||||  |||||||||||||||||||  ||||  |||||||    
T  16645230 ctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaa 16645131  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  16645130 cccggtattcc 16645120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 12703544 - 12703705
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||| || |||||||||||||   |||| ||| |||||||| ||||| |||||||||| |||   |||||| |||||||||||||| |||| |||||||    
T  12703544 ctttcacatcggtttccgatcctttaaagatgggcgactaatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaa 12703643  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      | ||||||| | | |||||| || |||| | |||||||||||||||| ||||||||||||    
T  12703644 ctcagtattcctcgagtacgtcctttgaaggatctccttgccactggagcccaagcaacttg 12703705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 21429411 - 21429326
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||| |||||||||||||||||||| |  | ||| |||||||||||||| |||||||| || |||||||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttcccc 21429326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 41339395 - 41339555
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||||||||||||  ||||  |||| ||||| |||||||| || ||| |||||||||||||   |||||||||||||||||||||| ||||| |||||    
T  41339395 ctttcgcaccggtttt-gatctgccaatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaa 41339493  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||  |   |||||| ||||||| | |||||||||||| ||| |||| |||||||    
T  41339494 cccggtattctccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttg 41339555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 2686454 - 2686598
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||||||| |||||| |||  | | ||| |||| |||| ||||||||  |||||||    
T  2686454 ctttcgcaccggtttccaacccacaaaaggtggacgactaattcggctcatgtgtagagacatatgtagtggtcaagtgttgtttcccctgaaaatcgaa 2686553  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccact 163  Q
    || | |||||  | | |||||| |||||| || ||||||||||||    
T  2686554 tctgatattctccgagtacgtctttggaaaaagctccttgccact 2686598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 21192752 - 21192625
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||| |||  ||||||| |||| ||| |||| || ||| |||||||||||||| ||||||||| | ||||||||| | || | |||||     
T  21192752 ctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgttcctc-ggaactcgaac 21192654  T
Q  120 ccggtattccacaaatacgtcattggaag 148  Q
    |||||||| | ||||||||||||||||||    
T  21192653 ccggtatttcccaaatacgtcattggaag 21192625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 27531717 - 27531817
Alignment:
Q  80 catgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||| ||| ||||||||| |||||||| ||||||||||| ||||||||||     |||||| ||||||| | ||||||||||||||||||||||||||||    
T  27531717 catgcgcattggccaagcattgttcccatgggaatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaactt 27531816  T
Q  180 g 180  Q
    |    
T  27531817 g 27531817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 8064825 - 8064906
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattc 128  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| ||||||||||| || ||||||    
T  8064825 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattc 8064906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 46108794 - 46108713
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgg 110  Q
    |||||||||| ||| |||| |||||||||||||  |||||||||||||||||||| ||||| |||||  |||||||||||||    
T  46108794 cggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgttcccctgg 46108713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 7000631 - 7000475
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| | ||||||||||| ||  ||||||||  ||||| ||||||||||||    || ||||||||||||||||  |||||||||||||    
T  7000631 ctttcgcaccggttttcaatccaccaaag-tgagcgactaatctggctcgtgcgtagaggca----cattggccaagcgttgttcttcctgggaatcgaa 7000537  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      ||||||||| | | |||||| ||||||| | || |||||||||| || |||| |||||||    
T  7000536 ctcggtattccccgagtacgtccttggaaggagcttcttgccactgtagcccaaacaacttg 7000475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 20354720 - 20354596
Alignment:
Q  49 gtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaa 147  Q
    ||||||||||||| || |||||||||||||||||| ||||| |||||||||||||| |||||| |||| ||  |||||||   | | | |||| ||||||    
T  20354720 gtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatttttcgagttcgtccttggaa 20354621  T
Q  148 gaaactccttgccactggagtccaa 172  Q
    | |  ||||||||||||||||||||    
T  20354620 ggagatccttgccactggagtccaa 20354596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 14567351 - 14567276
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    ||||||||||| ||||||| |||||||||| |  |||||||| |||||| |||||||||||||| |||||||||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 14567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 14597899 - 14597974
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    |||| |||||||||| ||||||| |||||||||||||||||| | | || |||||||||||||| |||||||||||    
T  14597899 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaa 14597974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 18531631 - 18531544
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||||| |||| |||||||||||| ||||  || || ||| | |||||||| |||||| ||||| ||||||||||    
T  18531631 ctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttcccc 18531544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 4736708 - 4736599
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||| ||||||| ||||||| ||||| ||||||||||||||  | ||||||||||||  || ||||||| ||||| |||| ||| |||| |||    
T  4736708 ctttcgcaccg-tttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcacattggccaaacgttgtttccactgagaattgaa 4736610  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  4736609 cccggtattcc 4736599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 6862335 - 6862227
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| | ||||||||||   |||||||||| ||  ||||||||| |||| |||||| |||||  || |||| | ||||||||||     
T  6862335 ctttcgcaccggtttccgaccaaccaaaggtgagtgactaattcgact-ttgcgtagagacatgcgcactgaccaagtattattccacagggaatcgaac 6862237  T
Q  120 ccggtattcc 129  Q
    ||||||||||    
T  6862236 ccggtattcc 6862227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 55005355 - 55005448
Alignment:
Q  70 tgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||| ||||||| | || ||||||| ||||||| | ||| |||||||    
T  55005355 tgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtatttcccagatacgtctttggaaggagctcattgccac 55005448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 14858822 - 14858714
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||||||||| || ||| ||||||||||||| ||||  | ||| | ||||||| |||| ||||||| ||||| |  | |||||||||| ||||     
T  14858822 ctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagcttgatccccctgggaaccgaac 14858723  T
Q  120 ccggtattc 128  Q
    |||||||||    
T  14858722 ccggtattc 14858714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 49952144 - 49952228
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtgga-cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    ||||||||||||||||| | ||| ||||||||   |||||||| |||||||||||||||||| || |||||| |||| |||||||    
T  49952144 ctttcgcaccggtttccaacccatcaaaggtgacgcgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtt 49952228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 50486055 - 50485971
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||| ||| |||||||||| |||| || ||||| |||||||| |||||| |||||||||||||| |  |||||||| ||||||||    
T  50486055 cttttgcatcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttc 50485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 35359848 - 35359761
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||||| ||||| |  |||| |||||||| |  || |||||| |||||||| ||||||| ||| |||||||||||    
T  35359848 ctttcgcaccggtttccgacccacctatagtgggcgactaatccaacttatgcgttgaggcatgcgcactggtcaaacgttgttcccc 35359761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 37369041 - 37369148
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctg-ggaatcgaa 118  Q
    |||||||| ||||||||||| ||||||  |||| ||||| || || ||| ||||||||||||||  |||||| ||| |||||||||| ||  ||||||||    
T  37369041 ctttcgcatcggtttccgattcaccaatagtgggcgacttatccgactcgtgcgtagaggcatgcacactggacaaacgttgttcccttgaagaatcgaa 37369140  T
Q  119 tccggtat 126  Q
    ||| ||||    
T  37369141 tccagtat 37369148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 54946353 - 54946298
Alignment:
Q  28 ccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    ||||||||||| ||||||| | ||| |||||||| |||||||||||||||||||||    
T  54946353 ccggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatg 54946298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 13552209 - 13552155
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagagg 79  Q
    |||||||||||| ||||| ||| |||||| ||||||| |||||||||||||||||    
T  13552209 gcaccggtttcctatccatcaatggtggatgactaatccggctcatgcgtagagg 13552155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 38841367 - 38841509
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||| || ||||||| | ||||||| |||||||||||| || ||||||||||||| |||  ||||| | ||||||||| || ||||   |||||||    
T  38841367 ctttcgcatcgatttccgaactaccaaagatggacgactaatccgactcatgcgtagagacat--gcactagacaagcgttgttttccctaaaaatcgaa 38841464  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
     | |||||||| | | |||||| ||||||||| ||| |||||||||    
T  38841465 cctggtattcc-cgagtacgtccttggaagaagctcattgccactg 38841509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 13436916 - 13436814
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||| ||||||||||| ||  || ||||||||||||||||||| ||||||||||        ||  ||||| ||||||||||||||| ||||||||||||    
T  13436916 cttttgcaccggtttctgacacatcaaaggtggacgactaattgggctcatgcg--------tgatcactgaccaagcgttgttccctctgggaatcgaa 13436825  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  13436824 cccggtattcc 13436814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 17946601 - 17946492
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| |||||| |||  ||||||| |||||| ||||||  | |||||| ||||| ||||| ||||||| ||||  |||||||||||  ||||||||    
T  17946601 ctttcgcaacggttttcgactcaccaaaagtggacaactaatctgactcatgtgtagaagcatgcgcactggtcaagaattgttcccctgaaaatcgaat 17946502  T
Q  120 ccggtattcc 129  Q
    | | ||||||    
T  17946501 ctgctattcc 17946492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 8424666 - 8424582
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||| || ||| ||| ||||||||| ||  ||| ||||| ||||| ||| |||||||||| ||||||||||| ||||||||    
T  8424666 ctttcgcatcgattttcgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 48656331 - 48656247
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||| |||||| ||||||| ||| |||| || |||||| | ||||||||  ||||||||| |||| || ||||||||||||    
T  48656331 ctttcgcatcggttttcgatccatcaatggtgaacaactaatccagctcatgcagagaggcatgtgcacaggtcaagcgttgttc 48656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 24478983 - 24479066
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||| || ||||||||||||||||| ||||| ||| |||| |||||| || |||||||| || | | ||| |||||||||||    
T  24478983 ctttcgtactggtttccgatccaccaacggtgggcgattaatccggctcgtgtgtagaggcgtgtgtaatggtcaagcgttgtt 24479066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 37194915 - 37194848
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggcca 94  Q
    |||||||||||| ||| ||| |  || | |||||| ||||||||||||||||||||| ||||||||||    
T  37194915 accggtttccgacccatcaatgacgggcaactaatccggctcatgcgtagaggcatgtgcactggcca 37194848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 45721198 - 45721123
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    ||||||||||||||||| | |||  ||||||||||||||||| || ||  |||||||||||| | ||| |||||||    
T  45721198 ctttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaa 45721123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 48352509 - 48352592
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||| ||| |||||  || ||||| |||||||||||| |||||| || |  |||||||| ||||||||||| ||||||||    
T  48352509 tttcgcactggtctccgactcatcaaagatggacgactaatccggctcgtgtgaggaggcatgtgcactggccaaacgttgttc 48352592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 25406562 - 25406620
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagag 78  Q
    ||||||||||||||||||| ||| |||||||| |||||||||  |  ||||||||||||    
T  25406562 ctttcgcaccggtttccgacccatcaaaggtgaacgactaatctgattcatgcgtagag 25406620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 27531669 - 27531722
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcg 73  Q
    ||||| |||||| |||||| |||||||||||||||||||| | || ||||||||    
T  27531669 ctttcacaccggcttccgacccaccaaaggtggacgactattccgactcatgcg 27531722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 1123863 - 1123951
Alignment:
Q  93 caagcgttgttccc-ctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||||||| ||| |||||||||||| |||||  ||||||| |||||| ||| | |||||| ||||| ||| | || |||||||    
T  1123863 caagcgttgttccctctgagaatcgaatccgatattctccaaatacatcattgaaaggagctccttaccacttgagccaaaacaacttg 1123951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 28945043 - 28944956
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    |||||| | |||||| |||| ||  |||| |||||||||||| || ||||||||||||| |||| ||||||| ||| ||||||| ||||    
T  28945043 ctttcgaatcggttttcgattcattaaagatggacgactaatccgactcatgcgtagagacatgtgcactggtcaa-cgttgtttccct 28944956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 42086435 - 42086274
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  42086435 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaa 42086336  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | ||||||||||| |||| ||||||||||||    
T  42086335 cccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttg 42086274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 1538539 - 1538378
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  1538539 ctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 1538440  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| | ||||| | |||||||||||||||| |||| |||||||    
T  1538439 cccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttg 1538378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 38897718 - 38897878
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||| ||||||||||||||||||||||| | |||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||     
T  38897718 ctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaac 38897817  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| || ||||||| ||| ||  | |||||||||||| |||| |||||||||||    
T  38897818 ccggtattccccatatacgtccttgtaaagagctccttgccacttgagttcaagcaacttg 38897878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 37263347 - 37263188
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| |    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaacc 37263248  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || |||||| |   |||||| || |||| |||||||||||||||||| ||||||||||||    
T  37263247 cgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaacttg 37263188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 5731919 - 5732080
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||||||| |||||||||  ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  5731919 ctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5732018  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||||||| ||||||||||||    
T  5732019 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 5732080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8513627 - 8513466
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||| ||| ||||||| |||||||||    
T  8513627 ctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaa 8513528  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||| ||||||||||||||||    
T  8513527 cccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttg 8513466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 20525945 - 20525785
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaat 119  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||     
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaac 20525846  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| |||||| |  |||| || ||| ||| | |||||||||||||||| ||||||||||||    
T  20525845 ccgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaacttg 20525785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 19572832 - 19572671
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||| ||||||| | ||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||    
T  19572832 ctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaa 19572733  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  19572732 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 19572671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 41163459 - 41163619
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||| |||||||| |||| ||||||||||||||||| | |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||     
T  41163459 ctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcccctgggaatcgaac 41163558  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| |   |||||  ||||||| | |||||||||||||||| |||| |||||||    
T  41163559 ccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttg 41163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 9805112 - 9805003
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9805112 ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 9805013  T
Q  119 tccggtattc 128  Q
     |||||||||    
T  9805012 cccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 9812980 - 9812819
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| |||||||| ||| ||||||||||| |||||  |||||||||||||||||||| ||| |||||||||    
T  9812980 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaa 9812881  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | ||||||||||||||||||||| |||||||    
T  9812880 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttg 9812819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 7866689 - 7866528
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||| ||||||  | ||||||||||||| |||||||| ||| || ||||||||||||||  |||||||||||||||||||| ||| |||||||||    
T  7866689 ctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 7866590  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||||||||||||||||||||    
T  7866589 cccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttg 7866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 12705122 - 12704961
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| |||||||| ||| ||||||||||| |||||  |||||| ||||||||||||| ||| |||||||||    
T  12705122 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 12705023  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | ||||||||||||||||||||| |||||||    
T  12705022 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttg 12704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 30349687 - 30349526
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||  ||||| |||||||||||||||||| |||||||| |||||||||| ||||||||||| | ||||| ||||| | |||| ||    
T  30349687 ctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaa 30349588  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| |||||||||||||||||| |||| |||||||    
T  30349587 cccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaacttg 30349526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 42291505 - 42291613
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaat 119  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||     
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaac 42291604  T
Q  120 ccggtattc 128  Q
    |||||||||    
T  42291605 ccggtattc 42291613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 23383765 - 23383655
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  23383765 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 23383666  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  23383665 cccggtattcc 23383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 7308370 - 7308527
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggta 125  Q
    ||||||||  |||||| ||||||||  |||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||| ||    
T  7308370 accggtttttgatccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgata 7308469  T
Q  126 ttccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |||| |||||||||| ||||||  | |||||||||||| ||  |||| ||||||||||    
T  7308470 ttcctcaaatacgtccttggaatgagctccttgccactagaacccaaacaacttgatt 7308527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 25417182 - 25417335
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||| |||  | ||||||| |||||| | |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 25417281  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     |||||||||| | | |||||| ||||||| | |||||||||||||||| ||||    
T  25417282 cccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 40117523 - 40117402
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  40117523 ctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T
Q  119 tccggtattccacaaatacgtc 140  Q
    | || |||||| | ||||||||    
T  40117423 ttcgatattccccgaatacgtc 40117402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 12766239 - 12766078
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| ||||||||  || |||||||||||||||||  |||||||||||| ||||||| |||  ||||||||    
T  12766239 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaa 12766140  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||| |||||||| |||||||    
T  12766139 cccggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttg 12766078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 14588616 - 14588761
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| ||   ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||| ||||  |||||||    
T  14588616 ctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaa 14588715  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
     ||| |||||| || ||||||| ||| ||||| |||||||||||||    
T  14588716 cccgatattccccagatacgtccttgaaagaagctccttgccactg 14588761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 9168252 - 9168411
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| |||||| ||| ||| |||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||       
T  9168252 cttttgcaccgattttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcctctgggaatcgttc 9168351  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||| |  ||||||| |||||||  | |||||||||||||||  |||||||||||    
T  9168352 tcggtattccccggatacgtctttggaag-gagtccttgccactggagctcaagcaacttg 9168411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 18136275 - 18136440
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaatt----cggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaat 114  Q
    |||| |||||||||||||| ||||||| |||||||||||||||    ||||||||| |||||||||||  ||||| ||||| |||||||||| |||||||    
T  18136275 cttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaat 18136374  T
Q  115 cgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||| |||||||||  |  ||||||| ||||||| | |||||||||||||||| |||| |||||||    
T  18136375 cgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttg 18136440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 13664368 - 13664225
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||||||  |||||||||||  ||| ||||  |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||    
T  13664368 ctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaa 13664269  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    |||||||||||  | ||||||| ||||||| | |||||||||||    
T  13664268 tccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 42861217 - 42861370
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctggg-aatcgaa 118  Q
    ||||||||||||| ||||| ||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||| ||||||| ||| |||    
T  42861217 ctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaa 42861316  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     ||| |||||| |  ||| ||| ||||||  | |||||||||||||||| ||||    
T  42861317 cccgatattccccggatatgtccttggaatgagctccttgccactggagcccaa 42861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 2485304 - 2485144
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| |||||||||| ||| ||||||||  |||||||| || ||||| |||||||||||| |||| |||| || ||||||||||| |||||||||     
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgttcccctaggaatcgaac 2485205  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || |||||||   |||||||| ||||||  | |||||||||| |||||||||| |||||||    
T  2485204 ccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttg 2485144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 39099778 - 39099865
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  39099778 cttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttcccc 39099865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 12082016 - 12081906
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||| ||||| |||||||  |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||| ||||||||    
T  12082016 ctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaa 12081917  T
Q  119 tccggtattcc 129  Q
     || |||||||    
T  12081916 cccagtattcc 12081906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 28857193 - 28857075
Alignment:
Q  63 cggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgcca 161  Q
    ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||| |   | |||| ||||||| | ||||||||||    
T  28857193 cggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgcca 28857094  T
Q  162 ctggagtccaagcaacttg 180  Q
    |||||| ||||||||||||    
T  28857093 ctggagcccaagcaacttg 28857075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 3653913 - 3654020
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| |||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||| ||||||| ||||||||||| | || |||||||||     
T  3653913 cttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt-ctctaggaatcgaac 3654011  T
Q  120 ccggtattc 128  Q
    |||||||||    
T  3654012 ccggtattc 3654020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 20693041 - 20692877
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  |  ||||||  ||||||||| | ||||||||||||||| |||| || |||||| ||    
T  20693041 ctttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaa 20692942  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||| |   |||||| ||||||||| ||| |||||||| ||| |||| ||||||||||    
T  20692941 cccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaacaacttgatt 20692877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 41801085 - 41800925
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||| ||||| ||||||| ||| ||||| || ||||||||| |||||| ||||||||| |||| ||| ||| ||||||||||||||| || ||||||||    
T  41801085 ctttcacaccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaa 41800986  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     ||| |||||| || ||||||||||| ||| || ||||| |||| ||||||||| ||||||    
T  41800985 cccgatattccccagatacgtcattgaaaggaattccttaccacgggagtccaaacaactt 41800925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 14728191 - 14728029
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgt--tcccctgggaatcga 117  Q
    ||||||||||||||||||| ||| ||||||||  | |||||| ||||||||||||||||||||| |||||| |||||||||||   ||||||  ||||||    
T  14728191 ctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtccccccctgaaaatcga 14728092  T
Q  118 atccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| | |||| | | | ||||||  | ||| |||||||||||| |||| |||||||    
T  14728091 atccggtatttcccaaaaatgaccttggaatgagctcattgccactggagcccaaacaacttg 14728029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 23247351 - 23247511
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||  ||||| ||||||||||||||   ||||  ||||||||||||| |||||||||||||    
T  23247351 ctttcgcaccggttttcga-ccatcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaa 23247449  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| ||  |||||| ||||||  | |||||||| |||| ||||||| |||||||    
T  23247450 cccgatattccccaggtacgtccttggaatgagctccttgctactgaagtccaaacaacttg 23247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 26077205 - 26077088
Alignment:
Q  64 ggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||| |  ||||||| |||||||||| ||||||  | |||||| ||||    
T  26077205 ggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccac 26077106  T
Q  163 tggagtccaagcaacttg 180  Q
    ||||| |||| |||||||    
T  26077105 tggagcccaaacaacttg 26077088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 14152158 - 14152010
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||  ||||| ||||||| ||| ||||||||| |||| |||||||||  |||| |||||  |||||||||||||||||||||  || ||||||||    
T  14152158 ctttcgcataggttttcgatccatcaatggtggacgattaatccggctcatggatagaagcatgcacactggccaagcgttgttccctatgagaatcgaa 14152059  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
     |||||||||| ||  ||| |||||||||| | ||||||||||||||||    
T  14152058 cccggtattccccaggtacatcattggaaggagctccttgccactggag 14152010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 20590103 - 20590020
Alignment:
Q  24 cgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||||||||||||||||| ||||  |||||| |||||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  20590103 cgcaccggtttccgatcctccaatagtggacaactaatacggctcatgcgtagagtcatgcgcactggccaagcgttgttcccc 20590020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 20682616 - 20682703
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||| | |||| |||||||| ||| |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  20682616 ctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccc 20682703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 43399236 - 43399149
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||||| | |||||| ||||||||||||| | |||| |||||||||||||| |||||||||||||||| ||||||    
T  43399236 ctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattcccc 43399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 11845800 - 11845970
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||| ||||||||||| | ||| ||||||||| ||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||| | | |||||||    
T  11845800 ctttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaa 11845899  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgattgttgaa 189  Q
     ||| |||| | |   |||||| ||||||| | |||||||||||| || || |||||| ||| ||| ||||    
T  11845900 cccgatatttctcgggtacgtccttggaaggagctccttgccactagaatcaaagcaaattggttgatgaa 11845970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 28862931 - 28862785
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatc 120  Q
    ||||||||||||||||| | || || ||||  | |||||||| | || |||||||||||||| ||| ||||||||||||||||| |||| |||||||| |    
T  28862931 ttcgcaccggtttccgacctactaatggtgagcaactaattcaggtcgtgcgtagaggcatgtgcattggccaagcgttgttccgcctgagaatcgaacc 28862832  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
     | |||||| | |||||||| ||||||| | ||||||||||||||||    
T  28862831 tgatattccccgaatacgtctttggaaggagctccttgccactggag 28862785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 163
Target Start/End: Complemental strand, 30995211 - 30995085
Alignment:
Q  38 atccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaata 136  Q
    ||||||||||| ||  |||||||| |||||| |||||||||||||| || ||||||||| |||||| ||||||||||||||| | |||||||| ||  ||    
T  30995211 atccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgta 30995112  T
Q  137 cgtcattggaagaaactccttgccact 163  Q
    |||| ||||||| | ||||||||||||    
T  30995111 cgtccttggaaggagctccttgccact 30995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 14974343 - 14974411
Alignment:
Q  40 ccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccct 14974411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 20255477 - 20255393
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||||| ||||||||  ||||||||||||||||||||| || |||||||||||||||||| ||||||| |||| |||||||    
T  20255477 ctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttc 20255393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 21375459 - 21375352
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||| ||||||||||||| ||||| |||||||||||| || |||||||||||| ||||| ||||||| |||  ||||||||| ||||| |||||     
T  21375459 ctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttcccttgggagtcgaac 21375360  T
Q  120 ccggtatt 127  Q
    ||| ||||    
T  21375359 ccgatatt 21375352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 5079438 - 5079278
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||| ||||| ||| || ||||||| |||| ||||||| |||| |     
T  5079438 ctttcgcaccggttttcga-ccaccaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaac 5079340  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||||||  ||||||  ||||||| | ||| ||||||| |||  |||| |||||||    
T  5079339 cccggtattccacggatacgtgcttggaaggagctctttgccaccggaacccaaacaacttg 5079278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 35561829 - 35561978
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattcca 130  Q
    ||||||| | ||||| ||||  ||||||||  |||||||| ||||||||||| ||||||| || | ||||||||| |||| | |||||  || ||||||     
T  35561829 tttccgacctaccaacggtgagcgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccc 35561928  T
Q  131 caaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |  ||||||||||||||| | ||| |||||||||||||||||||||||||    
T  35561929 cggatacgtcattggaaggagctctttgccactggagtccaagcaacttg 35561978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 27648424 - 27648487
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  27648424 ctttcgcatcggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcatg 27648487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 18045746 - 18045637
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| ||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||| | ||   ||||| |||||| |||||||||||||||    
T  18045746 ctttcgcatcggtttccgatccactaaaggtggacgattaa-tcggctcatgtgtagaggcatgcgtaccaaccaagggttgttccccctgggaatcgaa 18045648  T
Q  119 tccggtattcc 129  Q
     || |||||||    
T  18045647 cccagtattcc 18045637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 18294493 - 18294643
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattcc 129  Q
    ||||||||| ||||||||| ||| ||| |||| ||| ||||| ||||||| ||| |||||| |||||||||||||||||||  || ||| |||||||||     
T  18294493 ggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcccctggatattgaacccggtattct 18294592  T
Q  130 acaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | | || ||| ||||||| |  |||||| ||||| ||||||| |||||||    
T  18294593 ccgagtatgtccttggaaggagttccttgtcactgaagtccaaacaacttg 18294643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 4016254 - 4016415
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||| ||||||||| ||||||| ||||  | |||||| |||||| || ||||||||||| |||||||||||| |||||| ||||||  |||||||    
T  4016254 ctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaa 4016353  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||| | ||  |||||| ||||||  | || ||||||||||||| |||  |||||||    
T  4016354 cccgatatttctcaggtacgtccttggaatgagcttcttgccactggagcccatacaacttg 4016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 15034174 - 15034073
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatccggtatt 127  Q
    |||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||  ||||| ||||| |||| ||||| ||| ||| ||| ||||||||    
T  15034174 cggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtatt 15034075  T
Q  128 cc 129  Q
    ||    
T  15034074 cc 15034073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 20223160 - 20223011
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt--cccctgggaatcgaa 118  Q
    |||||||  ||||||||| | || |||||||||||||||||| | ||||||| ||||||||||  ||||||||||    ||||  |||| ||||||||||    
T  20223160 tttcgcaatggtttccgacctactaaaggtggacgactaatttgactcatgcctagaggcatgttcactggccaa----tgttccccccagggaatcgaa 20223065  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     ||| |||||| || ||||||| ||||||| | ||||||||||||  |||||||    
T  20223064 cccgatattccccagatacgtctttggaaggagctccttgccactacagtccaa 20223011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 38369807 - 38369698
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||| ||||  | ||| |||||||||   |||||| || ||| |||||||||||||| |||||||||||| |||||||||||| ||||||||     
T  38369807 ctttcgcaccgatttctaacccatcaaaggtgggttactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttcccctgagaatcgaac 38369708  T
Q  120 ccggtattcc 129  Q
    ||| ||||||    
T  38369707 ccgatattcc 38369698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18262617 - 18262704
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||| ||| ||||||| || |||||| |||||||| |||||| || ||||||| ||| ||||||| |||||||||||||||    
T  18262617 ctttcgcaccgattttcgatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttcccc 18262704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 1899103 - 1898964
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| |||||||||||  | |||| ||||||||  |||||||||||||| ||||      |||| ||||||||||||||||||| |||||||||||||||    
T  1899103 cttttgcaccggtttctaacccacaaaaggtgggtgactaattcggctcgtgcg------catgcgcactggccaagcgttgttccccctgggaatcgaa 1899010  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
     |||||||||| |   ||| || ||||||| | |||||||||||||    
T  1899009 cccggtattccccgggtacatccttggaaggagctccttgccactg 1898964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 21149842 - 21149721
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||| | ||||||||| ||||| |||||||| |  ||| ||||||||| |||| ||||||| ||| ||||||| ||||||  |||||||    
T  21149842 ctttcgcatcggttttctatccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaaacgttgttccccctgaaaatcgaa 21149743  T
Q  119 tccggtattccacaaatacgtc 140  Q
     | |||||||| ||||||||||    
T  21149742 cctggtattcctcaaatacgtc 21149721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 32874884 - 32874807
Alignment:
Q  31 gtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    |||||||| ||||||| ||||||||| ||||||||||| |||||| ||| ||| ||||| | ||||||||||||||||    
T  32874884 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactagtcaagcgttgttcccct 32874807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 7617028 - 7616940
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    |||||||||| ||||||||||||||||   ||||||||||||  | ||||||||||||||||||   ||||| ||| ||||||||||||    
T  7617028 ctttcgcaccagtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcatgcatactggtcaaacgttgttcccct 7616940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 24463885 - 24463969
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||| |||||||||| ||| |||  |||||||| |||||||| |||||| ||| |||||||||| ||||||||||| ||||||||    
T  24463885 cttttgcaccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttc 24463969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 35813021 - 35813161
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgtt-gttcccctgggaatcgaatccggtattccacaaatacgtcat 142  Q
    |||||||||||||||||| || |||||| |||||| |||| ||||||| ||||| ||  ||||||| ||||||||| |||||||||| |   |||||| |    
T  35813021 caaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctcgggtacgtcct 35813120  T
Q  143 tggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |||||  | || |||||||| | || |||| ||||||||||    
T  35813121 tggaatgagcttcttgccaccgcagcccaaacaacttgatt 35813161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 28857057 - 28857002
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgta 75  Q
    ||||||||||||||||||| ||||||||||||  |||||||| |||||||||||||    
T  28857057 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgta 28857002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 35403561 - 35403664
Alignment:
Q  70 tgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagt 168  Q
    ||||||||| |||| ||| ||||||||||||||| |||||  |||||||| |||||||| | | | |||||| ||||||| | ||||||||||||||||     
T  35403561 tgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagc 35403660  T
Q  169 ccaa 172  Q
    ||||    
T  35403661 ccaa 35403664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 6767130 - 6767211
Alignment:
Q  99 ttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||  |||||||| |||||||||| |   |||||| ||||||| | |||||||||||||||| ||||||||||||    
T  6767130 ttgttcccctatgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 6767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 39728495 - 39728334
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||| ||||||||||||||   | ||||||||  ||||||||||| |||  |||||||||||||  ||||||||||| |||| |||| |||  |||||||    
T  39728495 cttttgcaccggtttccgacgtatcaaaggtgagcgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaa 39728396  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| |   |||||  ||||||  | |||||||||||||||| |||| |||||||    
T  39728395 cctggtattccccgggtacgttcttggaaagagctccttgccactggagcccaaacaacttg 39728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 7336727 - 7336644
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||||||||||   ||||||||||||| ||||| |||| |||||| |||||||||||||| ||||||   |||||||||||    
T  7336727 ctttcgcaccggttttt-atccaccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttc 7336644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 24653811 - 24653894
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    |||||||| |||||| ||| ||||||| ||||||||| |||| ||||| ||||||||||| ||| |||||| ||||| |||||||    
T  24653811 ctttcgcatcggttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactgaccaagtgttgttc 24653894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 24875441 - 24875369
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||| ||| ||||||||||||| |||| |||||| ||||||||| |||| ||||||| ||| ||||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttc 24875369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 28857000 - 28856924
Alignment:
Q  104 cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||||||| |||||||||| |   | |||| ||||||| | |||||||||||||||| ||||||||||||    
T  28857000 cccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttg 28856924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 31890189 - 31890090
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtatt 127  Q
    |||||| |||||||  ||||||||||||||||||| |||  ||  |||||||||| ||||||| ||| ||||||||| ||| | |||||||| |||||||    
T  31890189 cggttttcgatccattaaaggtggacgactaattcagcttgtgtatagaggcatgtgcactggtcaaacgttgttcctcctagaaatcgaattcggtatt 31890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 36783351 - 36783296
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgta 75  Q
    |||| |||||||||||| | ||||||| |||||||||||||| |||||||||||||    
T  36783351 cttttgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcgta 36783296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 38297013 - 38297116
Alignment:
Q  70 tgcgtagaggcatgggcactggccaagcgttgttcccct-gggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagt 168  Q
    |||||||| | ||| |||||| |||| |||||||||||| |||||| ||| |||||||||| ||| ||| || || |||| | ||||||||||||||||     
T  38297013 tgcgtagaagaatgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagc 38297112  T
Q  169 ccaa 172  Q
    ||||    
T  38297113 ccaa 38297116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 24499090 - 24498932
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||  ||||| | ||||||||| ||||| | |||| |||||| | |||||||||||| ||||||  |||||||| ||  | | | |||||||     
T  24499090 ctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagcgttattttcttagaaatcgaac 24498991  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaact 178  Q
    ||| |||||  || ||||||| ||||||| | |||||||| ||| ||| |||| |||||    
T  24498990 ccgatattctccagatacgtccttggaaggagctccttgctactagagcccaaacaact 24498932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 35006769 - 35006903
Alignment:
Q  55 gactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattcca-----caaatacgtcattggaag 148  Q
    |||||||  ||||| ||||||||||||||  ||||| ||||||||||||||| || ||||| ||| ||||||||| |     || ||| ||||||||||     
T  35006769 gactaatctggctcgtgcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtattctattctccagatatgtcattggaaa 35006868  T
Q  149 aaactccttgccactggagtccaagcaacttgatt 183  Q
     ||||  || |||||||||||||| ||||||||||    
T  35006869 gaactttttaccactggagtccaaacaacttgatt 35006903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 17693339 - 17693493
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggt-ggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcga 117  Q
    ||||||||||||||||| | |||||||| |  |||||||||||  |||||||||||||||||||        || |||||||||||| ||||||||| ||    
T  17693339 ctttcgcaccggtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcat--------gcgaagcgttgttcctcctgggaattga 17693430  T
Q  118 atccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||||| ||| | | |||||| |||||||   |||||||||||| ||  | ||||||||||    
T  17693431 acccggtactccccgagtacgtccttggaaggggctccttgccactagaaactaagcaacttg 17693493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 25950593 - 25950646
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcg 73  Q
    |||||||| || ||| ||| |||||||||||||||||||||| |||||||||||    
T  25950593 ctttcgcatcgattttcgacccaccaaaggtggacgactaatccggctcatgcg 25950646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 18327868 - 18327714
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| ||| |||||||||| |||| |||| | | ||||| ||  |||||||||| |||||||||  ||||||||||||||         || |||||||     
T  18327868 cttttgcatcggtttccgacccactaaagattggcgactgatctggctcatgcgcagaggcatgcacactggccaagcgt---------ggaaatcgaac 18327778  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    || ||||| |   |||||||| ||||||| | |||||||||||||||||||||  |||||||||    
T  18327777 ccagtatttcctgaatacgtccttggaaggagctccttgccactggagtccaaaaaacttgatt 18327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 21487721 - 21487587
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaat 119  Q
    |||||||||||||| ||| |||  |||||||| |||||||| |||||| ||   ||||||||| ||||| ||||| ||||||||| ||||  |||||||     
T  21487721 tttcgcaccggttttcgacccattaaaggtgggcgactaatccggctcgtg---agaggcatgcgcactagccaaacgttgttcctcctgaaaatcgaac 21487625  T
Q  120 ccggtattccacaaatacgtcattggaagaaactcctt 157  Q
     || |||||| | | ||| |||||||||| | ||||||    
T  21487624 tcgatattcctcgagtacatcattggaaggagctcctt 21487587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 22655157 - 22655255
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||| ||||| ||| |||| |||||||||||||||||  | || |||||||||||||||  |||||  ||| | ||| |||||||||||||||||    
T  22655157 ctttcgcactggttttcgacccac-aaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaaacattgtttcccctgggaatcgaa 22655255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 25453032 - 25452903
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| |||||||||| ||| | || |||| ||| |||||||| |||||| ||||||||||||||  |||||| ||| | |||||||||||  |||  ||     
T  25453032 cttttgcaccggttttcgaccgactaaagttgg-cgactaatccggctcgtgcgtagaggcatgcacactggtcaaacattgttcccctgaaaattaaac 25452934  T
Q  120 ccggtattccacaaatacgtcattggaagaa 150  Q
     ||||||| | || |||||| ||||||||||    
T  25452933 tcggtatttctcagatacgtaattggaagaa 25452903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 35245017 - 35245091
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    ||||||| ||| ||||||||| | ||||||  |||||||||||||| |||||  |||||| ||| ||||||||||    
T  35245017 tttccgaaccatcaaaggtgggcaactaatcaggctcatgcgtagaagcatgcacactggtcaaacgttgttccc 35245091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 6764462 - 6764531
Alignment:
Q  26 caccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    |||| |||||||| ||| ||||| | | |||||||| |||||| |||||||||||||| ||||| |||||    
T  6764462 caccagtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcactagccaa 6764531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 16757486 - 16757417
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcact 89  Q
    |||||||| ||||||| || |||| |||| ||||||| ||||||  || ||||||||||||||| |||||    
T  16757486 ctttcgcatcggtttctgacccactaaagatggacgattaattcaacttatgcgtagaggcatgcgcact 16757417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 28615329 - 28615248
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattcc 129  Q
    ||||||||||||||||||||| |||||||| || || ||| ||  |||||||||||  |||| ||||| || ||| ||||||    
T  28615329 ggtggacgactaattcggctcgtgcgtagatgcgtgcgcaatgatcaagcgttgttttcctgagaatcaaacccgatattcc 28615248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 28857254 - 28857213
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaat 61  Q
    ||||||||||||||||||| ||||||||||||  ||||||||    
T  28857254 ctttcgcaccggtttccgacccaccaaaggtgagcgactaat 28857213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 20228825 - 20228737
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    ||||| || ||||||| |||||||||||| ||| ||||||||  | ||| || ||||||||||  ||||| ||||||| ||||| ||||    
T  20228825 ctttcacatcggtttctgatccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcactagccaagcattgtttccct 20228737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 40060391 - 40060339
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcg 73  Q
    |||||||||||||||| | ||| ||| ||||||||| |||| |||||||||||    
T  40060391 tttcgcaccggtttccaacccatcaatggtggacgattaatccggctcatgcg 40060339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 29136020 - 29135863
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||| |||||||||| | ||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  29136020 ctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29135921  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaa 176  Q
    ||||||||||| |  ||||||| ||||||||| |||||||||||||||| ||||||||    
T  29135920 tccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaa 29135863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 54261333 - 54261172
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| ||  |||||| ||||||| | |||||||||||||||| |||| |||||||    
T  54261233 cccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttg 54261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 47471938 - 47471778
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||     
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcccctgggaatcgaac 47471839  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||  |  |||||| ||||||| | ||| |||||||| ||| ||||||||||||    
T  47471838 ccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttg 47471778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29128026 - 29127865
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |||||| |||||||    
T  29128026 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaa 29127927  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| || ||||||| ||||||| | |||||||||||||||| |||| |||||||    
T  29127926 cccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttg 29127865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 49198449 - 49198297
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtatt 127  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||||| ||||||||    
T  49198449 cggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 49198350  T
Q  128 ccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || |  ||| ||| ||||||||||||||||| |||||||| |||| |||||||    
T  49198349 ccccggatatgtccttggaagaaactccttgtcactggagcccaaacaacttg 49198297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 6462518 - 6462356
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaat 119  Q
    |||||||||||||||| | |||| ||   ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||     
T  6462518 tttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaac 6462419  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgat 182  Q
    |||||||||| || ||||||| ||||||| | |||||||||||| ||| ||||||||||||||    
T  6462418 ccggtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaacttgat 6462356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 25295067 - 25294906
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||| | ||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||| |||| |||||| | ||||| ||    
T  25295067 ctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaa 25294968  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  25294967 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 25294906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 29762155 - 29762316
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | |||||||| |||||||||| |||||||||||| |||||| |||||| |||||| |    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcgga 29762254  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| | ||||| || ||||||| | |||||||||||||||| ||||||||||||    
T  29762255 cccgatattccccgaatacatccttggaaggagctccttgccactggagcccaagcaacttg 29762316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 45877561 - 45877400
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||| ||| |||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaa 45877462  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| |||||||   |||||||||||||||| |||| |||||||    
T  45877461 cccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaacttg 45877400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 48342127 - 48341966
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| |||||||||||||||||| ||||||||||||  || ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| |||    
T  48342127 ctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaa 48342028  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| ||  |||||| ||||||| | |||||||||||||||| |||| |||||||    
T  48342027 cccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttg 48341966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 10040659 - 10040503
Alignment:
Q  24 cgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccgg 123  Q
    ||||||||||||| | |||||||||||||||||| | | |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| |||     
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctgagaatcgaacccga 10040560  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||| |   |||||| || |||| | |||||||||||||||| ||||||||||||    
T  10040559 tattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaacttg 10040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 47749105 - 47749257
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| |||||||||| | ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| |||||||||     
T  47749105 ctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcccctaggaatcgaac 47749204  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
    ||||||||||    ||||||| ||||||||| ||| || ||||||||| ||||    
T  47749205 ccggtattccctggatacgtccttggaagaagctcattaccactggagcccaa 47749257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 7328950 - 7328790
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||||    
T  7328950 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaa 7328852  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||| | |   |||||| ||||||| |||||||||||||| |||  |||||||||||    
T  7328851 cccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaacttg 7328790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 30767247 - 30767407
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||  |||||||| ||||||||||||| |||||||| |||||| ||||||||||||||  ||||||||||| |||||| ||||||| |||||||    
T  30767247 ctttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaa 30767346  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     ||| |||||| ||  ||| || ||||||| |||||||||||||||||| |||||||||||    
T  30767347 cccgatattccccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 3136694 - 3136853
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| | |||||||||||||||||||| || |||||||||||||||||| |||||| ||||| ||||||||||||  ||||||||    
T  3136694 ctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcccctgaaaatcgaat 3136793  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||||||||| |   |||||| ||| ||| | || |||||||| |||| |||| ||||||    
T  3136794 ccggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaactt 3136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 13894033 - 13893872
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| ||| || |||||||||||| ||||||| |||| ||    
T  13894033 ctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaa 13893934  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  | ||||| ||||||| | |||||||||||||||| |||| |||||||    
T  13893933 cccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttg 13893872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 15320293 - 15320132
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||||||||||||| |||||||| |||||| ||||||||||||||  |||||||||| | ||||||| ||| | |||||||    
T  15320293 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaa 15320194  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | ||||||||||||||||||||| |||||||    
T  15320193 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttg 15320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 47219251 - 47219123
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||    
T  47219251 ctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaa 47219152  T
Q  119 tccggtattccacaaatacgtcattggaa 147  Q
     | |||||||| |  ||||||| ||||||    
T  47219151 cctggtattccccggatacgtccttggaa 47219123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 53649833 - 53649705
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaat 119  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| || | |||||||||||| ||||||| ||||| ||||||||     
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaac 53649734  T
Q  120 ccggtattccacaaatacgtcattggaag 148  Q
    |||||||||| | |||||||| |||||||    
T  53649733 ccggtattccccgaatacgtccttggaag 53649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 42412808 - 42412935
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||| |  ||||||| ||||||| | |    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagc 42412907  T
Q  153 tccttgccactggagtccaagcaacttg 180  Q
    ||||||||| ||||| ||||||||||||    
T  42412908 tccttgccattggagcccaagcaacttg 42412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 26207804 - 26207962
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatcc 121  Q
    |||||||||||||||| |||| ||   ||| |||||||| |||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||| ||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaaccc 26207903  T
Q  122 ggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||| |   ||| || ||||||| | |||||||||||||||| ||||||||||||    
T  26207904 ggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttg 26207962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 33251769 - 33251608
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||||||||  |||| ||| ||| |||| ||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||| | ||||||||||    
T  33251769 ctttcgcactcgttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaa 33251670  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| ||||||| | ||| ||||||| |||| |||| |||||||    
T  33251669 cccggtattcccctaatacgtccttggaaggagctcattgccaccggagcccaaacaacttg 33251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 35316063 - 35315902
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||||| |||||||| |||| |||||||| | ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 35315964  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||  |   |||||| ||||||| | ||| |||||||||||| |||| |||||||    
T  35315963 cccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaacttg 35315902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 28572211 - 28572371
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  28572211 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaa 28572310  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     || ||||||| |   | |||  ||| ||| | ||||||||||||||||  ||||||||||    
T  28572311 cccagtattccccgggtgcgttcttgaaaggagctccttgccactggagcacaagcaactt 28572371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 7650334 - 7650173
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||| | ||||||||||||| |||||||| |||||| ||||||||| |||  | |||||||||| |||||| ||||||| |||||||    
T  7650334 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaa 7650235  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||||  || ||| || ||| ||| |||||||||||||||||  |||| |||||||    
T  7650234 cccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttg 7650173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 51060281 - 51060442
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | | ||||||||||||||||| |||||| ||||| |||||| |||||| ||||||||    
T  51060281 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaa 51060380  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  |||  || ||||||| | ||  ||||||||||||||||| |||||||    
T  51060381 cccgatattccccggatagatccttggaaggagctatttgccactggagtccaaacaacttg 51060442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 3507534 - 3507694
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaat 119  Q
    |||||||||||||||||| ||||||||||||  |||||||| |||||| |||||||||||||| |||||||||||| ||||||||| || |||||| ||     
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaac 3507633  T
Q  120 ccggtattccacaaatacgt-cattggaagaaactccttgccactggagtccaagcaactt 179  Q
    ||||||||||     ||||| | || |||| | |||||||||||| |||||||||||||||    
T  3507634 ccggtattccctgtgtacgtccttttgaaggagctccttgccactagagtccaagcaactt 3507694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 8362682 - 8362574
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatc 120  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||| |||| |||||||| ||| |    
T  8362682 ttcgcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacc 8362583  T
Q  121 cggtattcc 129  Q
    |||||||||    
T  8362582 cggtattcc 8362574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 51682955 - 51683115
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaat 119  Q
    |||||||| ||||||||| ||||||  ||||| |||||||| |||||| || | ||||||||| ||||||| ||||||||||| |||||||||||||||     
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaac 51683054  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||||||| |  ||||||| ||||||| | ||||| |||||||||| |||| |||||||    
T  51683055 ctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaacaacttg 51683115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 3755655 - 3755516
Alignment:
Q  42 accaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtc 140  Q
    ||||||||| |||||||||| |||||||||||||||| |||| ||||||| ||| ||||||||| |||||||||||||  ||||||||| |  |||||||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtc 3755556  T
Q  141 attggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| ||  | ||| |||||||||||||||||||||||||    
T  3755555 cttgaaaagagctctttgccactggagtccaagcaacttg 3755516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 39849149 - 39849018
Alignment:
Q  49 gtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaag 148  Q
    |||| |||||||| |||||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||  |||||   | |||||| |||||||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcctctgggaatcgaacccgaaattccctgagtacgtccttggaag 39849050  T
Q  149 aaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||||||||||| |||||| |||||    
T  39849049 gagctccttgccactggagcccaagcgacttg 39849018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 15795494 - 15795603
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| |||||||||| ||| ||||||  ||||| |||||||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||     
T  15795494 cttttgcaccggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcccctgggaatcgaac 15795593  T
Q  120 ccggtattcc 129  Q
     |||||||||    
T  15795594 tcggtattcc 15795603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 26043919 - 26043812
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    ||||||| |||||||| ||  |||||||||||  |||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  26043919 ctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaa 26043820  T
Q  119 tccggtat 126  Q
     |||||||    
T  26043819 cccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 7310703 - 7310864
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||||| ||  |||||||| |||||| ||||||||||||||  ||| || |||| ||||||||| ||||||||||||    
T  7310703 ctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaa 7310802  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| ||  |||||  ||||||| | ||| ||||||| |||| |||| |||||||    
T  7310803 cccggtattcctcaggtacgttcttggaaggagctcattgccaccggagcccaatcaacttg 7310864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 41630512 - 41630673
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||| |||| |||||||| | ||||||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| |||    
T  41630512 ctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaa 41630611  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||   |   ||||||  |||||| | ||||||| |||||||| |||| |||||||    
T  41630612 cccggtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaacttg 41630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 22909890 - 22909782
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||| | ||| ||||| ||| ||||||||||| ||| ||||||||     
T  22909890 ctttcgcactggtttccgacccatcaaaggtgcacgactaattcggctcatgcgtagaagtatgcgcactagcctagcgttgttcctctgagaatcgaac 22909791  T
Q  120 ccggtattc 128  Q
    ||| |||||    
T  22909790 ccgatattc 22909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 31072985 - 31072821
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||| | | ||||||||||||||| ||||  || || |||||||||||||| |||||| |||||||||||| ||||||| |||||||    
T  31072985 ctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 31072886  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     | |||||||  |   |||||| ||| ||| | |||||||||| ||||| |||| ||||||||||    
T  31072885 cctggtattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaacttgatt 31072821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 45450447 - 45450605
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||| |  || ||||||||||||||||||   ||| ||||||||||||||| ||||||| ||||| |||||||||||| |||| ||     
T  45450447 ctttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttcccctggaaatcaaac 45450546  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || |||||| ||  ||||||| ||||||  | || ||||||||||||| ||||||||||||    
T  45450547 ccagtattctacggatacgtc-ttggaatgagct-cttgccactggagcccaagcaacttg 45450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 49543626 - 49543482
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||| ||| |||||||| |||| |||||||| ||||||||||||||| ||||||||||||||  ||||| |||| ||||||||||| || ||||||||    
T  49543626 ctttcgtaccagtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaa 49543527  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccact 163  Q
     ||| ||||||    ||||||| ||||||| | ||||||||||||    
T  49543526 cccgatattcccgggatacgtccttggaaggagctccttgccact 49543482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 10855457 - 10855330
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||||||| || |||||||||||||| | ||||||||||||||||| ||||||| |||| || |||||||| | ||| ||| || ||||||| | |    
T  10855457 cgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagc 10855358  T
Q  153 tccttgccactggagtccaagcaacttg 180  Q
    ||||||||||||||| |||| |||||||    
T  10855357 tccttgccactggagcccaaacaacttg 10855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 49021203 - 49021274
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactgg 91  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  49021203 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 19147068 - 19146909
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||| ||| |||||| ||   |||||||||||||||||||| ||||  |||||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctgaaaatcgaa 19146969  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || | | |||| | ||||||| |||||||| | |||  || |||||||||| || |||||||    
T  19146968 tctgatcttccccgaatacgttattggaaggagctc--tgtcactggagtctaaacaacttg 19146909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 30045928 - 30045767
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||  |||| ||| ||| ||||||||||||||||||  | ||| ||||||||| |||| ||||||||||||||||||| ||||| |||||||||    
T  30045928 ctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaa 30045829  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| ||  |||||  ||  ||| | ||| |||||||| ||| ||||||||||||    
T  30045828 cccggtattccccatgtacgttcttaaaaggagctcattgccacttgagcccaagcaacttg 30045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 34662320 - 34662449
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaat 119  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||| |||| | |||| |||| |||| |||| ||||  |||||||     
T  34662320 tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaac 34662419  T
Q  120 ccggtattccacaaatacgtcattggaaga 149  Q
    ||| |||||| ||| |||||| ||||||||    
T  34662420 ccgatattccccaagtacgtccttggaaga 34662449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 8164648 - 8164572
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    ||||||||||||||||||||| |||||||| || ||| |||||| ||||||| ||||||||||||||||||||||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttcccct 8164572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 35923628 - 35923784
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccgg 123  Q
    |||||||||| ||||||| ||||| ||||||||||||||| ||| ||| |||||||||| ||||||||||| ||||||| |||||  |||||||| | ||    
T  35923628 gcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctgg 35923727  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||  ||  |||||| ||||||  | ||| |||||||| ||| |||| |||||||    
T  35923728 tattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaacttg 35923784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 22405548 - 22405703
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccgg 123  Q
    |||| |||||||||  |||||||| ||||||| |||| |||||| ||| || ||||||  ||| |||  |||||||||||| |||| |||| ||||||||    
T  22405548 gcactggtttccgacgcaccaaagatggacgattaatccggctcgtgcataaaggcattcgcattggttaagcgttgttcctcctgagaatagaatccgg 22405647  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||| |||  |||||||||||| || | |||||||||||||||| |||| ||||||    
T  22405648 tatttcacggatacgtcattggtaggagctccttgccactggagcccaaacaactt 22405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 32873571 - 32873709
Alignment:
Q  42 accaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtc 140  Q
    ||||||||||| ||||||||  ||||||| |||||||||||| ||||||| |||||||||||| |||| ||||||||| | |||||||| |   ||||||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcc-cgggtacgtc 32873669  T
Q  141 attggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||  | |||||||||||||||| |||| |||||||    
T  32873670 cttggaatgagctccttgccactggagcccaaacaacttg 32873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 928707 - 928597
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||| ||| |||  ||||||||||||| ||||||| |||||| ||||||| |||||| ||||||| |||| |||||| |||||| ||||||||    
T  928707 ctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaa 928608  T
Q  119 tccggtattcc 129  Q
    || ||||||||    
T  928607 tctggtattcc 928597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 23511674 - 23511564
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||| ||| ||| ||||||||||||| |||| || |||||||||||||||||| ||||||| ||| ||||| ||||| || ||||||||    
T  23511674 ctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcgaa 23511575  T
Q  119 tccggtattcc 129  Q
     ||| ||||||    
T  23511574 cccgatattcc 23511564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 50405608 - 50405702
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||||||||| ||||||| ||||| |||||||| || ||| |||||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaa 50405702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 55069679 - 55069765
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    |||| |||||||||||||| ||||||||||||  ||| |||| |||||| |||||||||||||| ||||||||||| ||||||||||    
T  55069679 cttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccc 55069765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 37092565 - 37092666
Alignment:
Q  80 catgggcactggccaagcgttgttcccctgggaa-tcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaact 178  Q
    |||| ||||||||||| |||||||||||| |||| || |||||| ||||||||   |||||| ||||||||| |||||||||||||||| ||||||||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaagcaact 37092664  T
Q  179 tg 180  Q
    ||    
T  37092665 tg 37092666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 47303512 - 47303649
Alignment:
Q  43 ccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtca 141  Q
    |||||||| |||||||||| ||||||||| ||||||||||| |||||| ||||| |||||||| |||||||||| || ||| ||||   |  |||||||     
T  47303512 ccaaaggttgacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattttccggatacgtcc 47303611  T
Q  142 ttggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||||| || |||||| |||| |||| |||||||||||    
T  47303612 ttggaaaaagctccttaccaccggagcccaagcaactt 47303649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 7612991 - 7613079
Alignment:
Q  85 gcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||| | ||||||||||||| |||||||    
T  7612991 gcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgaagtccaa 7613079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 54237555 - 54237471
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||||||||||||||| |||| || ||||||||||| || |||||||||||||||| |||| |||||| ||||| |||||||    
T  54237555 ctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttc 54237471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 4638259 - 4638100
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatc 120  Q
    |||||| |||||||||| |||  |||||||| | |||||| |||||| |||||||||| ||| ||||||| ||||||||| ||| ||||||||||||| |    
T  4638259 ttcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
       |||| |  | ||||||| ||  ||| ||||||||||||||| ||||||| |||||||    
T  4638159 tattatttccaagatacgtccttaaaaggaactccttgccactgaagtccaaacaacttg 4638100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 24506648 - 24506751
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| |||||||||||||| ||||||| ||||  ||||||||  | |||||||||||||||||| ||||||| ||||||||||| |||||  |||||||     
T  24506648 cttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttccctgaaaatcgaac 24506747  T
Q  120 ccgg 123  Q
    ||||    
T  24506748 ccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 40660332 - 40660435
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccgg 123  Q
    |||||||||| ||| |||||||||||| | || |||| ||| ||||||||||||||||| |||||| ||||  |||||||| ||| ||||||||||||||    
T  40660332 gcaccggttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccgg 40660431  T
Q  124 tatt 127  Q
    ||||    
T  40660432 tatt 40660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 45402362 - 45402461
Alignment:
Q  31 gtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattcc 129  Q
    |||||||| |||| ||||||| ||||||||| ||||||||||||||||||||| |||| |||| || ||||||||| || ||||||||| ||| ||||||    
T  45402362 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattcc 45402461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 26361967 - 26362118
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||| ||||||||||||| ||| ||||||||  |||||||| |||||| ||||||||||||||  ||||| |||| ||||||||||| |||||||| ||    
T  26361967 ctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaa 26362066  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     | | |||||| | |  ||||| ||||||| | ||| ||| |||||||||||||    
T  26362067 cctgatattcctcga--acgtccttggaaggagctcattgtcactggagtccaa 26362118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 35998571 - 35998679
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||||||||| || |||| |||||||||||| |||| |  ||| |||||||||||||| ||||||  ||||||||||| |||| | |||| ||     
T  35998571 ctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtttccctcgaaatcaaac 35998670  T
Q  120 ccggtattc 128  Q
    |||||||||    
T  35998671 ccggtattc 35998679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 11687155 - 11687270
Alignment:
Q  66 ctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
    ||||| |||||||||||| ||||||||||||| ||||| |||||| ||||| || |||||||||  ||  |||||| ||||||| | || ||||||||||    
T  11687155 ctcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactg 11687254  T
Q  165 gagtccaagcaacttg 180  Q
    ||| |||| |||||||    
T  11687255 gagcccaaacaacttg 11687270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 33689053 - 33688970
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    |||||||||||| | ||||||| |||||| ||||||   |||||||||||||||||||| |||||||||||| ||| |||||||    
T  33689053 gcaccggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattcccct 33688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 43330732 - 43330815
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||| ||||||||  || ||||||||||||| |||||||| |||||| |||||||||||||| ||||||| |||| ||||||    
T  43330732 ctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 52364813 - 52364910
Alignment:
Q  33 ttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattcc 129  Q
    |||||| ||| ||||||| ||||| |||| | |||| |||||||||||||| ||||||| |||||||||||||  ||||||||||||  |||||||||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattcc 52364910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 13367531 - 13367443
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    ||||||||||||||||| | ||| ||| ||| |  ||||||| ||||||||||||| |||||||  ||||| |||||||||||||||||    
T  13367531 ctttcgcaccggtttcctacccaacaacggtaggtgactaatccggctcatgcgtaaaggcatgcacactgaccaagcgttgttcccct 13367443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 19873479 - 19873364
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagagg------catgggcactggccaagcgttgttcccctgggaa 113  Q
    |||| ||||| |||||||| |||| |||| |||||||||||| |||||| ||||||||||      |||| ||||||||||||| ||||||| |||||||    
T  19873479 cttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagaggtagaggcatgcgcactggccaagcattgttcctctgggaa 19873380  T
Q  114 tcgaatccggtattcc 129  Q
    || || | ||||||||    
T  19873379 tcaaacctggtattcc 19873364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 36043674 - 36043730
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtag 76  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  36043674 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 38394175 - 38394333
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||| ||||||| || || ||||||  |||||  ||||||| |||||||||||||||  |||  ||||| ||| ||||||| |||||||| ||||||||    
T  38394175 ctttcacaccggtctctgacccaccactggtgggtgactaatccggctcatgcgtagaaacatacgcact-gccgagcgttgtttcccctgagaatcgaa 38394273  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     |||||||||  || ||||||| ||||||||| |||||||| || | ||||||| ||||||    
T  38394274 -ccggtattcttcagatacgtccttggaagaagctccttgctaccgaagtccaaacaactt 38394333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 3763129 - 3763050
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtatt 127  Q
    |||||||||||||| | | || ||||||||| ||||  ||||| |||||||||||||| ||| |||||||||||||||||    
T  3763129 ggtggacgactaatccagttcgtgcgtagagacatgcacactgaccaagcgttgttcctctgtgaatcgaatccggtatt 3763050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 11025438 - 11025532
Alignment:
Q  85 gcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||||| ||||| ||||| ||||||||| | |||||||| || ||||||| |||||||   |||||| ||||||||| ||||||||||||    
T  11025438 gcactggccaagtgttgtccccctcggaatcgaacctggtattccccagatacgtccttggaag-ggctccttaccactggagcccaagcaacttg 11025532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 28242351 - 28242224
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||| || ||||||| |||||||||| ||||||||||| | ||||||| ||||| |||| || |||||||||  |  ||||||||||||||| | |    
T  28242351 cgactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaaggagc 28242252  T
Q  153 tccttgccactggagtccaagcaacttg 180  Q
    || || |||| ||||  |||||||||||    
T  28242251 tctttaccaccggagctcaagcaacttg 28242224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 44064651 - 44064588
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||| |||||||||||||| ||||||||||||  |||||||| ||| |||||||||||||||||    
T  44064651 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatg 44064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 49082878 - 49082772
Alignment:
Q  73 gtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtcca 171  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||||  ||||||||| |  ||||||| || |||| | |||| ||||||||||| |||    
T  49082878 gtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactggagccca 49082779  T
Q  172 agcaact 178  Q
    | |||||    
T  49082778 aacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 24146340 - 24146489
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattcca 130  Q
    ||||||| ||| ||| ||||||||||||||||||||||||  |||||||||| | | || ||||| ||||||  || || ||||| || ||| ||||||     
T  24146340 tttccgacccatcaatggtggacgactaattcggctcatgtctagaggcatgcgtattgaccaagtgttgttatccttgagaatcaaacccgatattccc 24146439  T
Q  131 caaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || ||| ||| ||||||| | ||||||| ||||| | ||||| |||||||    
T  24146440 cagatatgtccttggaaggagctccttgtcactgaaatccaaacaacttg 24146489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 40944969 - 40944829
Alignment:
Q  40 ccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacg 138  Q
    ||||||||||||  |||||||| || ||||||||||||||||||   |||||  ||| |||||||||| |||||||||||  ||||||||     |||||    
T  40944969 ccaccaaaggtgagcgactaatccg-ctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacg 40944871  T
Q  139 tcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || ||||||| | || |||||||| |||| ||||||||||||    
T  40944870 tccttggaaggagcttcttgccaccggagcccaagcaacttg 40944829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 41219699 - 41219539
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||| ||||| ||||||||||||||||   || |||| | |||| |||| ||||||||  ||||||||||| ||||||||| |||| ||||||||    
T  41219699 ctttcgcactggtttacgatccaccaaaggtgagtgattaatccagctcgtgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaa 41219600  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
       |||||||| |  ||||||| || |||| | ||| |||| || |||| ||||||||||||    
T  41219599 cttggtattcc-cgtatacgtccttagaaggagctcattgcaacgggagcccaagcaacttg 41219539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 47164213 - 47164152
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggca 81  Q
    ||||| ||||||||||||||||||||||| ||  |||||||| |||||| ||||||||||||    
T  47164213 ctttcacaccggtttccgatccaccaaagatgagcgactaatccggctcgtgcgtagaggca 47164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 15084945 - 15085029
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||| ||||||||||||||||||||||| | ||||||||||   |||| | |||||||| |||  |||||||||| ||||||||    
T  15084945 ctttcacaccggtttccgatccaccaaagatagacgactaatctagctcgtacgtagaggtatgcacactggccaaccgttgttc 15085029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 2668168 - 2668085
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    ||||||||| | ||||| | |||| |||||||  |||||||| | |||| |||||||||||||| |||||||||||| ||||||    
T  2668168 ctttcgcactgatttccaacccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcactggccaagtgttgtt 2668085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 7648823 - 7648760
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||| |||||||| |||||| |||||||||| ||| ||||||| ||| |||||||||||    
T  7648823 caaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttcccc 7648760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 34374442 - 34374525
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    ||||| ||||||||||||| |||||||||  || |||||||| || || |||||| |||||||| |||||| ||||| ||||||    
T  34374442 ctttcacaccggtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcactgaccaagtgttgtt 34374525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 37319889 - 37319972
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||||||| |||||| | ||| ||| ||||||||| |||||| |||| ||||||||||||||  |||| | |||||||||||    
T  37319889 ctttcgcaccagtttccaacccatcaacggtggacgattaattcagctcgtgcgtagaggcatgcacacttgtcaagcgttgtt 37319972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 46529924 - 46530031
Alignment:
Q  74 tagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
    ||||||||||  ||||||| |||| ||||| || ||| |||||||| |||||||||| ||  |||||| ||| ||| | |||||||||||||||| ||||    
T  46529924 tagaggcatgcacactggcgaagcattgtttcctctgagaatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaa 46530023  T
Q  173 gcaacttg 180  Q
     |||||||    
T  46530024 acaacttg 46530031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 2029268 - 2029350
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||||| ||||| ||| ||| ||| ||||| |||||||| | ||||||||||||||||||| | |||  ||||||||||||    
T  2029268 tttcgcactggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtt 2029350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 8683250 - 8683291
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatg 71  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  8683250 ggtttccgacccaccaaaggtggacgactaatccggctcatg 8683291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 29195319 - 29195382
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||||| |||||||||| | |||| |||||||||||||||||  || ||||| |||||||||||    
T  29195319 ctttcgtaccggtttccaacccactaaaggtggacgactaatctggttcatgtgtagaggcatg 29195382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 50753341 - 50753404
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||| |||||||||||||| ||||||| | || ||||||||| || ||| ||||||||||||||    
T  50753341 cttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatg 50753404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 13167497 - 13167563
Alignment:
Q  74 tagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgt 139  Q
    |||||||||| |||||||||||||||||||||   ||||||||||| ||| |||||| || ||||||    
T  13167497 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatacgt 13167563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 10043789 - 10043720
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcact 89  Q
    ||||||||||||||||||| ||||||| ||||  ||| ||||  | ||| |||||||||||||| |||||    
T  10043789 ctttcgcaccggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcatgtgcact 10043720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 25515749 - 25515857
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    ||||||| | ||||||||||||| || ||||  |||||||| |  ||||| |||||| |||||  |||| ||||| | |||||||||| | ||| ||| |    
T  25515749 tttcgcatcagtttccgatccactaatggtgagcgactaatccaactcatacgtagaagcatgtacactagccaaacattgttcccctagtaatagaacc 25515848  T
Q  121 cggtattcc 129  Q
    |||||||||    
T  25515849 cggtattcc 25515857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 5855630 - 5855469
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||||| |||| ||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  5855630 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5855531  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| ||||||| | |||||||||||||||| |||| |||||||    
T  5855530 cccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaacttg 5855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 10172971 - 10173135
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    ||||||| |||    
T  10172971 ctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaa 10173070  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    ||||||||||| || ||||||| ||||||| | | |||||||||||||| |||| ||||||||||    
T  10173071 tccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttgatt 10173135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 10422896 - 10422735
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||| | |||||||    
T  10422896 ctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaa 10422797  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||||||||||| | ||||||||||||| || |||| |||||||    
T  10422796 cccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaacttg 10422735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 49078222 - 49078061
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| | ||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  49078222 ctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 49078123  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| || |||| | |||||||||||||||| ||||||||||||    
T  49078122 cccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaacttg 49078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 26325920 - 26325759
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||    
T  26325920 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaa 26325821  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  ||||||| ||| ||| | |||||||||||||||| || |||||||||    
T  26325820 cccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttg 26325759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 26660245 - 26660085
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| | ||||  |||  |||||||||| ||| |||||||    
T  26660245 ctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaa 26660147  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | ||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  26660146 cccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaagcaacttg 26660085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 41663856 - 41664017
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||||| |||||| ||||| |||||| |||||||||||||||    
T  41663856 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 41663955  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| || |||| | |||||||||||||||| |||| |||||||    
T  41663956 cccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttg 41664017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 11397889 - 11398049
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||| ||||||| |||||||||||||||||||||| || |||||||||||||||||  ||| ||||||| |||||||||||| |||||||||     
T  11397889 ctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcggaatcgaac 11397988  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||  |  |||| || ||||||| | |||||||||||||||| ||||||||||||    
T  11397989 ccggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttg 11398049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 43959821 - 43959981
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||    
T  43959821 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaa 43959920  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     ||| |||||| |   |||||||||||||| | | |||||||||||||| |||| ||||||    
T  43959921 cccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaactt 43959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 9659179 - 9659338
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||     
T  9659179 ctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaatcgaac 9659278  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||||||||| | | |||||| || |||  | |||||||||||||||| | |||||||||    
T  9659279 ccggtattccccgagtacgtccttagaatgagctccttgccactggagcctaagcaactt 9659338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8764099 - 8763938
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||| |||||| |||||||||| ||||    
T  8764099 ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaa 8764000  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |   |||||| ||||||| | ||||||||||| |||| ||||||||||||    
T  8763999 cccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttg 8763938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 18915975 - 18915814
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||| | ||||||| ||||  |||||||| |||||| ||||||||||||||  ||||||||||| |||||| |||||||||||||||    
T  18915975 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 18915876  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||||| ||||||||||||| || |||| |||||||    
T  18915875 cccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttg 18915814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 30927727 - 30927880
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||| ||||||||||| || |||||||| ||||||||||||| |||||||||||||||||||||  || |||||||||||||||||| |||| |||||||    
T  30927727 cttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaa 30927826  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     ||| |||| | ||  |||||| ||||||| | |||||||||||||||||||||    
T  30927827 cccgatatttcccaggtacgtccttggaaggagctccttgccactggagtccaa 30927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 32979 - 32819
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |    
T  32979 ctttcgtatcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcgga 32880  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     ||| |||||| |   |||||| ||||||| | ||| |||||||||||| |||| ||||||    
T  32879 cccgatattcccccggtacgtccttggaaggagctcattgccactggagcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 33418125 - 33418276
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgt-tcccctgggaatcgaatccggtattc 128  Q
    ||||||||| | |||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattc 33418224  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      |   |||||| ||||||| | |||||||||||||||| |||| |||||||    
T  33418225 tccgggtacgtctttggaaggagctccttgccactggagcccaaacaacttg 33418276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 16263653 - 16263532
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||||||| |||| ||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaa 16263554  T
Q  119 tccggtattccacaaatacgtc 140  Q
     | |||||||| || |||||||    
T  16263553 cctggtattccccagatacgtc 16263532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 17642004 - 17642165
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||| |||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  17642004 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 17642103  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||| |     ||||||  |||||| | ||||||| |||||||| |||| |||||||    
T  17642104 cccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttg 17642165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 45361882 - 45362027
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||||| |||||||| |||||| ||||||||||||||||||||| |||| ||||||||    
T  45361882 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaa 45361981  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
     ||||||||||     |||||| ||||||| | |||||||||||||    
T  45361982 cccggtattcccagggtacgtccttggaaggagctccttgccactg 45362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 33498839 - 33498995
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||| |||| ||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||    
T  33498839 ctttcgtaccgctttacgatccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaa 33498938  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagca 175  Q
     ||||||||   ||  ||| || ||  ||| |||||||||||||||||| |||||||    
T  33498939 cccggtattttccaggtacatccttaaaaggaactccttgccactggagcccaagca 33498995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 47312932 - 47313062
Alignment:
Q  53 acgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||||  |||||||||||||||||||  ||||||||||| |||||||||||| |||||| || |||||||||| || ||||||| ||||||| | |    
T  47312932 acgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcccctaggaatcaaacccggtattccccagatacgtccttggaaggatc 47313031  T
Q  153 tccttgccactggagtccaagcaacttgatt 183  Q
    || |||||||||||| |||| ||||||||||    
T  47313032 tcgttgccactggagcccaaacaacttgatt 47313062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 2980931 - 2981092
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||||| ||||||| |||| |||  |||||||||||| || ||| ||||||||||||||  ||||||||||| ||||||||| ||||||||||||    
T  2980931 ctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaa 2981030  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| |  |||||||  |||||| | |||||||||||| ||| ||||||||||||    
T  2981031 cccagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaacttg 2981092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 33004015 - 33004176
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||| ||| ||||||  |||||  ||||||| |||||| |||||||||||||| ||||||||||||| ||| ||||||||| |||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaa 33004114  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||| |||||| |  ||||||| ||||||| | |||||   |||||||| ||||||||||||    
T  33004115 tccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaagcaacttg 33004176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 37339928 - 37339817
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgt--tcccctgggaatcga 117  Q
    ||||||||||||||||| | ||||||||||||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||   ||||||||||||||    
T  37339928 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcga 37339829  T
Q  118 atccggtattcc 129  Q
    | ||||||||||    
T  37339828 acccggtattcc 37339817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 14254278 - 14254429
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattc 128  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||||| ||||||  |||||||  ||||||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattc 14254377  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | | |||||||| ||||||  |  |||||||| |||||| | ||||||||||    
T  14254378 cccgaatacgtccttggaatgagttccttgcccctggaggctaagcaacttg 14254429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 44969772 - 44969665
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||  ||||||||||||||||||| |||| ||||||||     
T  44969772 ctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgttctcctgagaatcgaac 44969673  T
Q  120 ccggtatt 127  Q
    | ||||||    
T  44969672 ctggtatt 44969665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 10336615 - 10336477
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtatt 127  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||  ||||||| ||| ||||    
T  10336615 cggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatatt 10336516  T
Q  128 ccacaaatacgtcattggaagaaactccttgccactgga 166  Q
    |  |  ||||||| ||||||| | |||||||||||||||    
T  10336515 ctccggatacgtctttggaaggagctccttgccactgga 10336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 5504139 - 5503978
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| |||||   ||||||||| || ||||| ||||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaa 5504040  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | | |||||| || ||||||  | ||||| | |||||||||||||||  |||| |||||||    
T  5504039 cctgatattccccagatacgttctcggaaggagctccttgccactggaacccaaacaacttg 5503978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 32142846 - 32143005
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||| ||||||||  |||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||  |||||||    
T  32142846 ctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaa 32142945  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     |||||||||||    |||||| ||||||  | ||| ||||||||| ||||||| ||||||    
T  32142946 cccggtattcca-gggtacgtccttggaatgagctctttgccactgaagtccaaacaactt 32143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 32150922 - 32151082
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||| ||| ||| ||||||||  |||||||||||||||||||||| ||||||| |||||| ||||  |||||| ||||||| |||||||    
T  32150922 ctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaa 32151021  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     | | |||||| | || ||||| ||||||| | |||||||||||||||| |||| ||||||    
T  32151022 cctgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 46929738 - 46929898
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| |||||| ||||||| |||| ||||||||||||| ||||||||| || |||||||| ||| ||||||||||||||||   ||| |||||||     
T  46929738 ctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgttcttttggaaatcgaac 46929837  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || |||||  || ||||||| ||||||| | || ||||||||| ||| ||||||||||||    
T  46929838 tcgatattctccagatacgtctttggaaggagcttcttgccactagagcccaagcaacttg 46929898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 48798105 - 48798231
Alignment:
Q  55 gactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaact 153  Q
    ||||||| ||||||||||||||||||||| ||||| | ||||||||||| ||||||| ||||||| ||| |||||| |  ||||||||||||||| | ||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagct 48798204  T
Q  154 ccttgccactggagtccaagcaacttg 180  Q
    |||||||||||||| || | |||||||    
T  48798205 ccttgccactggagccccaacaacttg 48798231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 15466073 - 15465912
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||| | |||||||||| ||||||||||||  |||| |||  | ||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||    
T  15466073 ctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 15465974  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| |||||||||| ||||||| | | | ||| |||||||| |||| |||||||    
T  15465973 cctggtattccccaaatacgtccttggaaggagccctttgtcactggagcccaaacaacttg 15465912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 18649352 - 18649513
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||| |||||| |||||||| ||| ||||  ||||| | |||||||||||| ||||||| ||||||||||| ||||||  |||||||    
T  18649352 ctttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaa 18649451  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||  || ||||||| ||||||| | ||| || ||||| |||| |||||||||||    
T  18649452 cccgatattctccagatacgtccttggaaggagctcattaccactagagttcaagcaacttg 18649513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 25165501 - 25165349
Alignment:
Q  27 accggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtat 126  Q
    ||||||| |||| ||||||||||||   ||||||| |||||  ||| |||||||||| ||||||||  || ||||||||||||  |||||||||||||||    
T  25165501 accggttaccgacccaccaaaggtgagtgactaatccggcttgtgcctagaggcatgcgcactggcagagtgttgttcccctgataatcgaatccggtat 25165402  T
Q  127 tccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| ||  |||||| ||||||| | |||||||||||| ||| ||||||||||||    
T  25165401 tccccaggtacgtc-ttggaaggagctccttgccactagagcccaagcaacttg 25165349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 34697443 - 34697282
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||| | ||| |||| |||| |||||||| |||||||||||||||||||||  |||| |||||| |||||| |||||  ||||||||    
T  34697443 ctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaa 34697344  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| | |||||||  ||||||| | |||||||||||   |||||||||||||||    
T  34697343 cctggtattccccgaatacgtttttggaaggagctccttgccaccaaagtccaagcaacttg 34697282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 40288477 - 40288638
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||| |||| ||||||||| ||||||| | ||  |||||||| |||||| || |||||||||||   ||||||||| ||||||||||| ||| |||||||    
T  40288477 cttttgcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaa 40288576  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | |||||||| ||||||  | |||||||||||| ||| ||||||||||||    
T  40288577 cccggtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttg 40288638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 50503361 - 50503522
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||  ||||| |||| ||| |||||| |||||||||||||| ||||||| |||| |||||| |||||||||||||||    
T  50503361 ctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaa 50503460  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  ||||||| ||| ||| | ||||| |||||| |||||||  |||||||    
T  50503461 cccgatattccccggatacgtccttgaaaggagctcctcgccactagagtccatacaacttg 50503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 892302 - 892457
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||     ||||||  || |||| ||| |||||| ||||| |||||||||    
T  892302 ctttcgcaccgatttccgatccaccaaaggtgggcgactaatccggctcatgc-----ggcatgcacattggctaagtgttgttccccctaggaatcgaa 892396  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     |||||||||| | |||||||| ||| ||| | ||||||||||||| || |||| ||||||    
T  892397 cccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaactt 892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 2567384 - 2567220
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||| |||||||||||| ||||||||| |||||| |||||  | ||| || ||||||||||| ||||||||||||||||| || ||| |  |||||||    
T  2567384 ctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaa 2567285  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||  | |||||||| ||||||| | |||||||||| || || |||| ||||||||||    
T  2567284 cccggtattctccgaatacgtccttggaaggagctccttgccagtgaagcccaaacaacttgatt 2567220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 4581682 - 4581758
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaag 96  Q
    ||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||    
T  4581682 ctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 17389879 - 17389719
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||| ||    |||||||||||| | |||||||||| |||||||| ||||||| ||| | ||||||||| |  ||||||||    
T  17389879 ctttcgcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaaacattgttcccccgaaaatcgaat 17389780  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| |||| | |  | ||||||||| ||| | ||||||||||||||||||||||| |||||    
T  17389779 ccgatatttcccggaaacgtcattgaaaggagctccttgccactggagtccaagctacttg 17389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 12036743 - 12036905
Alignment:
Q  20 ctttcgcaccggttt-ccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcga 117  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||  ||||| |||||||||||||| ||||||||||||| ||||| ||||| |||||| |    
T  12036743 ctttcgcactggttttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaa 12036842  T
Q  118 atccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | || ||||||   |  |||||| ||||||| | || |||||||| |||| |||| |||||||    
T  12036843 acccagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaacaacttg 12036905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 17092480 - 17092638
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatcc 121  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||   |||||||||| ||||| ||||||||  |||||||  |    
T  17092480 tcgcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactc 17092579  T
Q  122 ggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||| | | ||||||||  || ||| | || ||||||||| |||| |||||||||||    
T  17092580 gatatttcccgaatacgtccatgaaaggagcttcttgccactagagttcaagcaacttg 17092638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 21849205 - 21849303
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaa 118  Q
    |||||| |||||||| ||| |||||||  |||  |||||||| |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  21849205 ctttcgtaccggttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccctgggaatcgaa 21849303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 34719884 - 34719742
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||||||||| |||||||| ||||||||||||  ||||||||  | ||| |||||||||||||| ||||||| |||||||| |||||  |||||||||||    
T  34719884 ctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaa 34719785  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgcca 161  Q
     || ||||||| ||  |||||| ||||||| | ||||||||||    
T  34719784 cccagtattccccaggtacgtccttggaaggagctccttgcca 34719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 15238106 - 15238267
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||| |||||||||| | ||||||||||||  ||||||||  |  || ||||||||||||||  || ||||||||||||| ||||| |||||||||||    
T  15238106 ctttcgaaccggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaa 15238205  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| ||||||  |  |||||| ||||||| | |||||||||| ||||| ||||||||||||    
T  15238206 cccgatattccctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttg 15238267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 18808373 - 18808212
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||||||||||||| |||  |||| | | ||| |||| |||||||| | || ||||||| ||||||| |||||||||||||| ||| |||| |||    
T  18808373 ctttcgcaccggtttccgacccaataaagttagtcgaataatccggctcatacataaaggcatgcgcactggtcaagcgttgttccctctgagaattgaa 18808274  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | | ||||||  | ||||||| ||||||||||||| |||||||||||| |||| |||||||    
T  18808273 cctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaacaacttg 18808212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 35211172 - 35211257
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc 105  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | | |||| |||| |||||||    
T  35211172 ctttcacaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgcgtattggctaagcattgttcc 35211257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 45726433 - 45726594
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||| |||  |||||||||||  ||| |||| |||| ||||||||    
T  45726433 ctttcgcaccagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaa 45726532  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| |   |||||| ||||| | |  || |||| ||||||| ||||||||||||    
T  45726533 ccaggtattcctcgggtacgtccttggagggaggtctttgcaactggagcccaagcaacttg 45726594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 26258803 - 26258643
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||| ||||| |||||| | |||| |||||||||||| |||| || |||||||||| ||||||| |||||| |||||||||||   |||| |||||||||    
T  26258803 cttttgcaccagtttccaacccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttgtcttcctgagaatcgaat 26258704  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||| |   |||||| ||||||| | |||||| | ||| || ||||| |||||||    
T  26258703 ccggtattccccgggtacgtctttggaaggagctccttactacttgaatccaaacaacttg 26258643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 50371834 - 50371918
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||  |||||||| ||||| | ||||||||||||||||||    
T  50371834 ctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttc 50371918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 16956574 - 16956432
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||| ||||||||| ||||||||||||   ||||||| |||||| |||||||||||||| ||||||| ||| ||||||| |||||| ||| ||||    
T  16956574 ctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaa 16956475  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgcca 161  Q
      ||||||||| |   |||||| ||||||| | ||||||||||    
T  16956474 cacggtattccccgggtacgtccttggaaggagctccttgcca 16956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 12744523 - 12744684
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| | ||||| || |||||||  |||  ||||||||||||||||||||||||| |||| ||||| | ||||||||||| ||||||  |||||||    
T  12744523 ctttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaa 12744622  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || | |||||| || ||||||| ||||||| |  ||  || ||||||||||||| |||||||    
T  12744623 tctgatattcctcagatacgtccttggaaggagttcaatgtcactggagtccaaacaacttg 12744684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 12755513 - 12755674
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| | ||||| || |||||||  |||  ||||||||||||||||||||||||| |||| ||||| | ||||||||||| ||||||  |||||||    
T  12755513 ctttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaa 12755612  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || | |||||| || ||||||| ||||||| |  ||  || ||||||||||||| |||||||    
T  12755613 tctgatattcctcagatacgtccttggaaggagttcaatgtcactggagtccaaacaacttg 12755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 14357863 - 14357703
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||| ||| |||  |||| |||| ||| || |||||||||||||| ||||||| ||| ||||| |||   ||| |||||||    
T  14357863 ctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaa 14357764  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
     | | ||||   || ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  14357763 cctgatattttccagatacgtccttggaagaaactccttgccactggagctcaagcaactt 14357703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 17358471 - 17358615
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||||| | ||||||| || |||| |||| || || ||||||  |||||||||||| ||||||| ||| ||| |||||||||||| ||||| ||||||||    
T  17358471 ctttcgtagcggtttctgacccactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaa 17358570  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccact 163  Q
     |||||||||| |||||||||| ||| ||  | ||||||||||||    
T  17358571 cccggtattccccaaatacgtccttgaaatgagctccttgccact 17358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 42744880 - 42744734
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||||||||||||||||| |||||||| ||||      ||||| ||||||||||||||  ||||||||||||||||||||        |||||     
T  42744880 ctttcgcaccggtttccgatccactaaaggtgggcgac------ggctcgtgcgtagaggcatgctcactggccaagcgttgttcc--------tcgaac 42744795  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||     |||||| ||||||| | ||| |||||||||||||||||||||||||    
T  42744794 ccggtattccctgggtacgtccttggaaggagctcattgccactggagtccaagcaacttg 42744734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 38791610 - 38791693
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||| | ||||||  |||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  38791610 ctttcgtatcggtttttgatccatcaaagatggacgactaattcggctcatgcgtagaggcatgcgcacttgccaatcgttgtt 38791693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 42710147 - 42710214
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaag 96  Q
    |||||||||||| ||||| |||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  42710147 cggtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaag 42710214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 34878054 - 34877937
Alignment:
Q  64 ggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    ||||| || ||||||||||| |||||||||||| |||||||| ||| ||||||||| | |||||||| | |||||||| |||||||   |||||||||||    
T  34878054 ggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccac 34877955  T
Q  163 tggagtccaagcaacttg 180  Q
    || || |||| |||||||    
T  34877954 tgaagcccaaacaacttg 34877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 5063866 - 5063986
Alignment:
Q  42 accaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtca 141  Q
    ||||||||||| |||||||| | |||| ||| ||||| |||  |||||||||||||||||| |||||  |||||||||||  |||||| || |||||||     
T  5063866 accaaaggtgggcgactaatccagctcgtgcatagagacatacgcactggccaagcgttgtgcccctaagaatcgaatccaatattccccagatacgtcc 5063965  T
Q  142 ttggaagaaactccttgccac 162  Q
    ||||||| | || ||||||||    
T  5063966 ttggaaggagcttcttgccac 5063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 6563505 - 6563393
Alignment:
Q  64 ggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||| ||||||||| ||||| |||  |   ||| || ||||||| | |||||||||||    
T  6563505 ggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccac 6563406  T
Q  163 tggagtccaagca 175  Q
    |||||||||||||    
T  6563405 tggagtccaagca 6563393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 8905211 - 8905311
Alignment:
Q  80 catgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||| |||||||||||||||||||||||| | ||||| | ||| |||||  |  ||||||||||||||| | |||||||||||| |||||||| ||||||    
T  8905211 catgcgcactggccaagcgttgttccccttgaaatcgtacccgatattctccggatacgtcattggaaggagctccttgccactagagtccaaacaactt 8905310  T
Q  180 g 180  Q
    |    
T  8905311 g 8905311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 31576547 - 31576655
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||| ||||||||||||||  || ||||| |||||||||||  |||||||||||||||||||   ||| ||||||||| ||| |||||||| ||||||||    
T  31576547 cttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaa 31576646  T
Q  119 tccggtatt 127  Q
     ||||||||    
T  31576647 cccggtatt 31576655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 35908864 - 35908755
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggcc-aagcgttgtt-cccctgggaatcga 117  Q
    |||| |||||||||||||| ||||  | |||||||||||||| ||||||||||||||||||||| |||||| || ||| |||||| |||||   ||||||    
T  35908864 cttttgcaccggtttccgacccac--atggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcga 35908767  T
Q  118 atccggtattcc 129  Q
    ||||||||||||    
T  35908766 atccggtattcc 35908755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 10507796 - 10507721
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc 105  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||||||| |||  |||||||||| |||||||||    
T  10507796 ggtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgttcc 10507721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 19195469 - 19195391
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||||||||||||||||  || |||||||||||||     |||||||||||||||||||||| ||||||||||| |||||||    
T  19195469 ctttcgcaccggtttccgactcatcaaaggtggacga-----tcggctcatgcgtagaggcatgcgcactggccaaacgttgtt 19195391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 50095012 - 50094925
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    |||| |||||||||||||| |||| || |||||||||||||| || |||||||||||| ||||| | ||||| ||| |||||||||||    
T  50095012 cttttgcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgttcccc 50094925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 6899666 - 6899597
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcact 89  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||  |||||| ||||||| |||||    
T  6899666 ctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 31152803 - 31152714
Alignment:
Q  41 caccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctggg-aatcgaatccggtattcc 129  Q
    |||||||||||||||||||||| | ||| || ||||||||| | |||||| ||||||||| |||||| ||| ||||||| ||||||||||    
T  31152803 caccaaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattcc 31152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 51437565 - 51437512
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcg 73  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  51437565 ctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctcatgcg 51437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 28324615 - 28324690
Alignment:
Q  55 gactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatccggtattcc 129  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| |||| |||||| |||||||||| ||| ||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattcc 28324690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 31734368 - 31734237
Alignment:
Q  48 ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaa 147  Q
    ||||||||| ||||| ||||| | |||||||||||| ||||||||||| ||||||| |||   ||||||||||| ||||||| |   ||| || ||||||    
T  31734368 ggtggacgattaatttggctcgtacgtagaggcatgcgcactggccaatcgttgtttcccctagaatcgaatccagtattcctcgggtacatccttggaa 31734269  T
Q  148 gaaactccttgccactggagtccaagcaactt 179  Q
    |   |||||||| |||| || |||||||||||    
T  31734268 ggtgctccttgctactgaagcccaagcaactt 31734237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 45536766 - 45536656
Alignment:
Q  70 tgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagt 168  Q
    |||||||||||||| ||||||||||||||||||||||| | | ||||||| |||||||||  |   |||||||||||||| |  |||| |||||| |||     
T  45536766 tgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaag-agttcctcgccactagagc 45536668  T
Q  169 ccaagcaacttg 180  Q
    ||||||||||||    
T  45536667 ccaagcaacttg 45536656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 13266041 - 13265936
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||||| |     |||||||||||||  ||||||||||||||||||||| |||||||| |  ||||| || |||| |||||||||    
T  13266041 ctttcgcaccggtttccgatcta-----ggtggacgactaacccggctcatgcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaa 13265947  T
Q  119 tccggtattcc 129  Q
     | ||||||||    
T  13265946 ccaggtattcc 13265936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 34334353 - 34334439
Alignment:
Q  78 ggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccact 163  Q
    |||||| |||||||||||| |||||||||| ||||||||||| |||||||||| |  ||||||| ||||||  | ||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 41743302 - 41743220
Alignment:
Q  98 gttgttcccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||| | |||||||||||| |||||||||| |  ||||||| ||||||| | ||||||||||| |||| ||||||||||||    
T  41743302 gttgtttctctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttg 41743220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 9853277 - 9853430
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||| |||||| |||| || ||||||||||||||||| ||||  || || || ||||||||||| |||||||  || ||||| ||||||| |||||||||    
T  9853277 cttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaa 9853376  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     ||||||||   |   ||| || ||||||| | |||||||||||||||| ||||    
T  9853377 cccggtattttccgggtacatccttggaaggagctccttgccactggagcccaa 9853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 41696598 - 41696758
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgtt-gttcccctgggaatcgaa 118  Q
    |||||||| | |||||||||||| ||||||||  ||||||||  |  || |||||||||||||   |||||| |||| |||  | ||||||| |||||||    
T  41696598 ctttcgcatcagtttccgatccatcaaaggtgagcgactaatctgattcgtgcgtagaggcatacacactggtcaagtgttaatccccctggaaatcgaa 41696697  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| || ||||||| ||||||| | ||| |||||||| ||||| ||||||||||    
T  41696698 -cccgtattcctcagatacgtccttggaaggagctcattgccactagagtctaagcaacttg 41696758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 48761272 - 48761199
Alignment:
Q  32 tttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc 105  Q
    ||||||| | |||||||||||||||||||| | |||| ||||||||||||||  ||||| |||| |||||||||    
T  48761272 tttccgaccgaccaaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgttcc 48761199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 13262187 - 13262063
Alignment:
Q  24 cgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccg 122  Q
    |||| |||||| ||||||  ||| |||||||||||||| || ||| ||||||||| |||| | | || |||| |||||||| |||||| ||||||| |||    
T  13262187 cgcatcggttttcgatccttcaatggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccg 13262088  T
Q  123 gtattccacaaatacgtcattggaa 147  Q
    ||||||| || |||| || ||||||    
T  13262087 gtattccccatatacatccttggaa 13262063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 25178576 - 25178696
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||| | |||||| ||| |||| ||||||| ||||||||| |||||  |  ||||||| ||| |||||||||||||||| ||||| | ||||| |||     
T  25178576 ctttcgtatcggttttcgacccactaaaggtgaacgactaatccggcttgtctgtagaggtatgcgcactggccaagcgttattcccttaggaatagaac 25178675  T
Q  120 ccggtattccacaaatacgtc 140  Q
     ||||||| | ||||||||||    
T  25178676 tcggtatttcccaaatacgtc 25178696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 17988690 - 17988749
Alignment:
Q  50 tggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctg 109  Q
    |||||||||||| ||| ||||||||||||| ||| ||||||||||||| ||||| |||||    
T  17988690 tggacgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtttccctg 17988749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 5143154 - 5143239
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc 106  Q
    ||||| ||||||||| ||||||| ||||||||  |||||||| || ||  |||||||||||||| | |||| |||||||||||||||    
T  5143154 ctttcacaccggttttcgatccatcaaaggtgagcgactaatccgtctg-tgcgtagaggcatgcgtactgaccaagcgttgttccc 5143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 18708564 - 18708650
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatccggtattcc 129  Q
    ||||||||  ||||||||  |||||||| ||||||||||| ||||| ||||||| ||| ||||||||| ||||||| || |||||||    
T  18708564 caaaggtgagcgactaatctggctcatgtgtagaggcatgcgcactagccaagcattgcttcccctggaaatcgaacccagtattcc 18708650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 38859121 - 38859215
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| ||| ||| ||||||||| ||| ||||  | ||| |||||||||||||| ||| || |||| | ||||| |||||||||||||||    
T  38859121 gcaccggttttcgacccatcaaaggtgggcgattaatctgactcgtgcgtagaggcatgtgcattgaccaaacattgttacccctgggaatcgaa 38859215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 3850742 - 3850799
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtaga 77  Q
    ||||||||||||||||||| |||  |||||||| |||||||| || ||| ||||||||    
T  3850742 ctttcgcaccggtttccgacccattaaaggtgggcgactaatccgcctcgtgcgtaga 3850799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 41220742 - 41220595
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  41220742 ctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 41220643  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactgga 166  Q
     |||||||||| |   |||||| ||||||| | |||||||||||||||    
T  41220642 cccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 7747381 - 7747220
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||  |||||||||| ||||||||| ||| |||||||||    
T  7747381 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaa 7747282  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  7747281 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 7747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 12864331 - 12864170
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  |||||||||| ||||||||| |||||| ||||| |||||| ||||||| |||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaa 12864232  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||||| | |||||||||||||||| | ||||||| |||||||| |||| |||||||    
T  12864231 tccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttg 12864170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 38005509 - 38005348
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  38005509 ctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaa 38005410  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| |   |||||| ||||||| | |||||||||||||||| |||| |||||||    
T  38005409 cccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttg 38005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 25540403 - 25540551
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  25540403 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaa 25540502  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
     || ||||||| || ||||||| ||||||  | ||||||||||||||||    
T  25540503 cccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 18902529 - 18902690
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  ||||| ||||||||| || | ||||||| ||||||||||||||| |||||||||||    
T  18902529 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaa 18902628  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| | | |||||| ||||||| | |||||||||||||||| ||||||||||||    
T  18902629 cccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttg 18902690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 44945700 - 44945540
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||| |||||  |||||||||||||| ||||||||| ||     
T  44945700 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcctctgggaatcaaac 44945601  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    || ||||||  | | |||||| ||||||| | |||||||||||| ||| ||||||||||||    
T  44945600 ccagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaacttg 44945540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 20612534 - 20612696
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattc-ggctcatgcgtagaggcatgggcactggccaagcgttgttccc--ctgggaatcga 117  Q
    |||||||||||||||||| ||||||| |||||||||||||| | ||||||||| |||||||||| |||||||||||| |||||||||  ||| |||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcga 20612633  T
Q  118 atccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||||||||| | |||||  | ||||||| | |||||||||||||||| ||||||||||||    
T  20612634 acccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaacttg 20612696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 8410238 - 8410077
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| || ||||| |||| |||||||| |||||| |||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  8410238 ctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 8410139  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||  |   |||||| ||||||| | |||||||||||||||| ||||||||||||    
T  8410138 cccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 8410077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 22593240 - 22593081
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  22593240 ctttcgcaccggtt-ccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaa 22593143  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
      | ||||||| |   |||||| ||||||| | ||||||||||||||||  |||||||||||    
T  22593142 ctcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaagcaacttg 22593081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 38962870 - 38962709
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||| ||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||  |||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaa 38962771  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||| ||  | |||||| |||||||||||||| |||||||    
T  38962770 cccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaacaacttg 38962709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 10026626 - 10026776
Alignment:
Q  31 gtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattcc 129  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||| ||||||||      
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatttt 10026725  T
Q  130 acaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | | |||||| ||||||| | |||||||||| ||||| ||||||||||||    
T  10026726 ccgagtacgtccttggaaggagctccttgccattggagcccaagcaacttg 10026776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 2550975 - 2550814
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||| | | |||||||| |||| |||||||| |||||||||||||||| |||| |||||||| ||| |||||||| |||||||||||||    
T  2550975 ctttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaa 2550876  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| |  ||||||| ||| ||| | |||||||||||||||| ||||||||||||    
T  2550875 cccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaacttg 2550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 3643886 - 3644047
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||||  |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| | | | |||| ||    
T  3643886 ctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaa 3643985  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||  | |||||| ||||||||| ||||||||||||    
T  3643986 cccggtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaacttg 3644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 14169608 - 14169769
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgg-gaatcgaa 118  Q
    ||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| |||| ||||||| |||| |||||||||| || ||||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaa 14169707  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| | |||||||| ||||||  | ||||||| |||||||| |||| |||||||    
T  14169708 cccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttg 14169769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 44139591 - 44139430
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||  ||||| |||||||| |||||| |||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  44139591 ctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaa 44139492  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| || || | || ||||||| |  ||||  ||||||||| ||||||||||||    
T  44139491 cccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttg 44139430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 331598 - 331447
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattc 128  Q
    ||||||| | ||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||| |||||||||    
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 331499  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |   |||||| ||||||  | ||| |||||||||||| ||||||||||||    
T  331498 cccgggtacgtccttggaaagagctcattgccactggagcccaagcaacttg 331447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 6358150 - 6358309
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  6358150 ctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 6358249  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaact 178  Q
    || |||||||| |  ||||||| || |||  | || ||||||||||||| |||| |||||    
T  6358250 tctggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaact 6358309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 39201513 - 39201668
Alignment:
Q  26 caccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggt 124  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||  |||||||||| | ||||| |||||| ||||||||| ||||    
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggt 39201612  T
Q  125 attccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||| | | |||||| ||||||| | ||||||||||||  || |||| |||||||    
T  39201613 attcctcgagtacgtccttggaaggagctccttgccactatagcccaatcaacttg 39201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 10823167 - 10823057
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    ||||||||||||||||||| |||| |||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||    
T  10823167 ctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaa 10823068  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  10823067 cccggtattcc 10823057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 41031905 - 41032061
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||| ||||||||| |||||||||||||  ||||||| |||||| ||||||||||||||  ||||||||||| |||||| |||||||||||||||    
T  41031905 ctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 41032004  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaa 176  Q
     ||||| |||| |   |||||| ||||||| | |||||||||||||||| ||||||||    
T  41032005 cccggtgttcc-ctggtacgtccttggaaggagctccttgccactggagcccaagcaa 41032061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 42770650 - 42770811
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||| ||| |||||| ||| ||||||||||||||||| |||| |||||| |||| ||||||||| ||||||||||||||||||| |||||| |||| |||    
T  42770650 cttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaa 42770749  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||| | |  ||||||| ||||||| | ||| |||||||||||| ||||||||||||    
T  42770750 cccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaagcaacttg 42770811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 35946845 - 35946685
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||||| |||||||| ||||||| |||||||||||||| |||||| ||||||||||||||  || |||||||||||||||||||| |||||||||     
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcccctaggaatcgaac 35946746  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||||||||| |  ||||||| || |||  | |||||| |||| | || ||||||||||||    
T  35946745 tcggtattccccggatacgtccttagaatgagctccttaccacggaagcccaagcaacttg 35946685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 10669694 - 10669538
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccgg 123  Q
    |||||||||||||| |||||||||||| |||| |||| || ||| ||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccgg 10669595  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||  || ||  |||||| ||||||| |  ||||| || |||||||||||||||||||    
T  10669594 tagcccccaggtacgtccttggaaggagatccttacccctggagtccaagcaacttg 10669538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 16325702 - 16325603
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||  ||||||||||| |||||| |||||||||||||||    
T  16325702 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 16325603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 34356311 - 34356152
Alignment:
Q  22 ttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatc 120  Q
    |||||||  |||||||| ||| ||| |||| |||| |||| |||||||||| |||||||||| |||||| ||||| |||||||||| ||| ||||||| |    
T  34356311 ttcgcactcgtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacc 34356212  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||| || ||||||| ||||||  | |||||||||||||||| |||| |||||||    
T  34356211 cggtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaacttg 34356152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 12455417 - 12455307
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||| ||||  |||||||| |||||| |||||||||||||| |||||||| |||||||| ||||||||| |||||||    
T  12455417 ctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaa 12455318  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  12455317 cccggtattcc 12455307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 3811690 - 3811851
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    |||||||| ||||||| || ||||||||||||| ||| |||| ||||||||||||||||||||| ||| || ||||| ||||||||| ||||||||||||    
T  3811690 ctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaa 3811789  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||| | | |||||| ||||||| |  ||||||||| || || |||| |||||||    
T  3811790 cccgatattcctcgagtacgtccttggaaggagttccttgccattgaagaccaaacaacttg 3811851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 37560280 - 37560115
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||| ||||||||| ||| ||| ||||||||||||| |||| |||||| |||||||||||||| |||||| |||| ||||||||||| || ||||||||    
T  37560280 ctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaa 37560181  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgattg 184  Q
     | |||||||| |   |||||| ||||||| | || ||| ||||||||| |||| |||||||||||    
T  37560180 cctggtattcctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaacttgattg 37560115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 21286551 - 21286387
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||| |||||||||||| | ||||||| | ||   ||||||| | |||| |||||||||||||| ||||||| ||||||||||| | |||||||||||||    
T  21286551 cttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaa 21286452  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||| |  ||||||| ||||||| | ||||||||||||||||  ||| ||||||||||    
T  21286451 cccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaacttgatt 21286387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 24179655 - 24179568
Alignment:
Q  40 ccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattc 128  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  24179655 ccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcccctgagaatcgaa-ccggtattc 24179568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29653729 - 29653574
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||||||||||||    |||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||||| || |||||| |||||||    
T  29653729 ctttcgcaccggtttcc----caccaaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaa 29653635  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||| |   | |||||| |||||||||  || |||||||||||| |||| |||||||    
T  29653634 tccggtatttccggagtacgtccttggaagaagttcattgccactggag-ccaaacaacttg 29653574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 31596431 - 31596595
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    ||||||||||||||||| || || ||||||| ||||| |||||| ||||||||||||| | ||| ||||||||||| | ||||||||| ||  ||| |||    
T  31596431 ctttcgcaccggtttccaattcatcaaaggtagacgattaattcagctcatgcgtagaagtatgtgcactggccaaacattgttccccctgaaaatagaa 31596530  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     | | ||||| ||  ||||||| ||||||| | ||||||||||||||| ||||||||||||||||    
T  31596531 cctgatattctacggatacgtctttggaaggagctccttgccactggaatccaagcaacttgatt 31596595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 33005858 - 33005702
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    |||||||| |||||||||| |||| |||||||  ||| ||||  | |||||||||||||||||| |||||||||||| ||||||||||||||||  |||     
T  33005858 ctttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttgttcccctgggaacagaac 33005759  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaa 176  Q
    ||||||||||||   |||||| | | ||  | |||||||||||||||| ||||||||    
T  33005758 ccggtattccacgggtacgtcctagaaatgagctccttgccactggagcccaagcaa 33005702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 34130301 - 34130452
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||| ||||||||| ||||| ||| ||||||||||  ||||||||||||||| |||| ||| ||| ||| |||||||| ||||  |||||||     
T  34130301 ctttcgcaccgatttccgatctaccaatggtagacgactaatctggctcatgcgtagagacatgtgcaatggtcaaacgttgttctcctgaaaatcgaac 34130400  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
    | | |||| | | |||||||| |||||||||||||||||||||||||| ||||    
T  34130401 ctgatatttccctaatacgtc-ttggaagaaactccttgccactggaggccaa 34130452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 21180347 - 21180474
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||||||| || |||||||||||||||||||||  |   |||||| ||||||| | |    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagc 21180446  T
Q  153 tccttgccactggagtccaagcaacttg 180  Q
    ||||||||||||||| |||| |||||||    
T  21180447 tccttgccactggagcccaaacaacttg 21180474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 10046487 - 10046636
Alignment:
Q  31 gtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaatccggtattcc 129  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||| | ||| ||||| ||||| || |||||||| |||||||||     
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  130 acaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |  ||||||  ||||||| | |||||||||| ||||| ||||||||||||    
T  10046586 ccggatacgttcttggaaggagctccttgccattggagcccaagcaacttg 10046636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 11069985 - 11069875
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||| |||||||||| ||||||| |||||||||||||||| |||| |||||||||| ||| ||||||||||| ||||||| ||||| |||||||||    
T  11069985 ctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaa 11069886  T
Q  119 tccggtattcc 129  Q
     | ||||||||    
T  11069885 cctggtattcc 11069875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 20116611 - 20116696
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc 105  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||| ||| |||||| ||||||||||    
T  20116611 ctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcc 20116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 25549835 - 25549682
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||| |||||| ||| ||||||| ||||| |||||||||||| |||||| |||||||||||||| ||||| |||||  |||| || ||||  ||||||||    
T  25549835 cttttgcaccgatttacgatccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaa 25549736  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     || ||||||| |||||||||  ||||||| | |||||||||||||||| ||||    
T  25549735 cccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaa 25549682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 29422322 - 29422161
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||| |||||| ||| |||  || |||||||| ||||||||| |||| |||||||    
T  29422322 ctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaa 29422223  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| |   |||||| ||| ||| | |||||||| ||||||| |||| |||||||    
T  29422222 cccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttg 29422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 16035044 - 16034880
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||||||  || ||| ||||  |||||||| |||||| | |||| |||||||  |||||| ||||||||||||| ||||  |||||||    
T  16035044 ctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaa 16034945  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||| |  ||||||| ||||||| |  ||||| |||||| ||||||||||||||||||    
T  16034944 cccggtattcctcggatacgtccttggaaggagttccttaccactgaagtccaagcaacttgatt 16034880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 45263686 - 45263830
Alignment:
Q  40 ccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaatccggtattccacaaatacg 138  Q
    ||||||||| ||  ||| |||| |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |  |||      
T  45263686 ccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaa 45263785  T
Q  139 tcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    |  ||| ||| | |||||||||||||||| |||| ||||||||||    
T  45263786 tttttgaaaggagctccttgccactggagcccaaacaacttgatt 45263830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 7787158 - 7787003
Alignment:
Q  25 gcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccgg 123  Q
    |||||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||||| | ||||||||||  ||||| ||||||| ||||||| ||||    
T  7787158 gcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccgg 7787059  T
Q  124 tattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaactt 179  Q
    |||||| |   |||||| | | ||| |  ||||||||||||||| |||| ||||||    
T  7787058 tattccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 9360747 - 9360830
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 9360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 34722787 - 34722688
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    |||||||||||||||| |||||| ||||||||| |||||||| |||||| ||||||||| |||| |||||| ||||||||||||| ||||| ||||||||    
T  34722787 ctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaa 34722688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 2528340 - 2528493
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| ||||||||  ||| |||| ||  |||||||| ||||| ||| |||||||||||  ||||| |||||||||||| |||||||||||||||    
T  2528340 ctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaa 2528439  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     ||||| |||| | | |||||| ||||||| | ||| |||||||||||| ||||    
T  2528440 cccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaa 2528493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 18649025 - 18649186
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||| |||||||| | |||||||| |||  |||||||| || |||||||||||||||||| |||||| ||||   ||||||| |||| ||||||||    
T  18649025 ctttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaa 18649124  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||||||   ||| | || ||||||| | || ||||||||||||| |||| |||||||    
T  18649125 tccggtattccctgaatgcatccttggaagcagcttcttgccactggagcccaaacaacttg 18649186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 19976806 - 19976959
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||| |||||||| || ||||||||| ||||||||||| || |||||||||| |||| |||||| |||| |||| || ||||||  |||||||    
T  19976806 ctttcgcaccgatttccgattcatcaaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaa 19976905  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaa 172  Q
     |||||||||| |  ||||||| ||||||  | || ||||||||||||| ||||    
T  19976906 cccggtattccccggatacgtccttggaaagagctacttgccactggagcccaa 19976959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 29421389 - 29421300
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctg 109  Q
    ||||||||| ||||||||||| |||||| || |||||||| |||| ||||||||||||||||||  ||||| ||||||||||||||||||    
T  29421389 ctttcgcactggtttccgatctaccaaatgtagacgactacttcgactcatgcgtagaggcatgctcactgcccaagcgttgttcccctg 29421300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 39806884 - 39806994
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    |||||||||||||||  || |||||||||||||| ||||||| || ||| || ||||||||||| ||||||||||| ||||| ||| | |||||||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaa 39806983  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  39806984 cccggtattcc 39806994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 13026410 - 13026571
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||| ||| ||||||| || | |||||| ||||  ||||||| ||||||||||||||||||||| ||||||||||| | ||||||| ||||  |||||||    
T  13026410 cttttgcatcggtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaa 13026509  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| ||||||    ||||||| ||||||| |  |||||||||||||||| ||| |||||||    
T  13026510 cccgatattccctggatacgtccttggaaggagttccttgccactggagttcaatcaacttg 13026571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 3848913 - 3849077
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||  ||| ||| ||| |||||||| ||||||||| || ||| ||||||||| |||| || |||||||| ||||||| ||||||  |||||||    
T  3848913 ctttcgcaccaattttcgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaa 3849012  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
     |||||||||  || ||||||| ||| ||  ||||||||  ||||||||  ||||||||||||||    
T  3849013 cccggtattctccagatacgtccttgaaatgaactccttatcactggagctcaagcaacttgatt 3849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 34346286 - 34346373
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||||| ||||||||||||  ||| ||||  | ||||||||||||||||||  ||||||||||| ||||||||||    
T  34346286 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttcccc 34346373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 28616378 - 28616544
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||||||| || |||| |||| ||| ||||||||  ||||| |||||||||||||| |||||| ||||| ||| || ||||||  |||||||    
T  28616378 ctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaa 28616477  T
Q  119 tccggtattccacaaatacgtcattggaagaaactcc-ttgccactggagtccaagcaacttgattg 184  Q
     ||| |||||| |  ||| ||| ||||||| |  ||| ||| ||||||||||||| |||||||||||    
T  28616478 cccgatattccgcggatatgtccttggaaggagttcctttgtcactggagtccaaacaacttgattg 28616544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 27726047 - 27725962
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc 105  Q
    ||||| ||||||||||||| ||||||  ||||| |||||||| |||||  |||||||||||||| ||||||||||||| |||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcc 27725962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 28525454 - 28525554
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt--cccctgggaatcga 117  Q
    ||||| |||| |||||||| |||  ||||||||| ||||||| |||||| |||||||||||||| |||||||||||| ||||||  ||||||| ||||||    
T  28525454 ctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccctggaaatcga 28525553  T
Q  118 a 118  Q
    |    
T  28525554 a 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 34738332 - 34738484
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||| |||||||||||||| | ||||  |||||||||||||| || ||| |||||||||||||         ||||||||||||| || |||||||||||    
T  34738332 cttttgcaccggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat---------ccaagcgttgttctccatgggaatcgaa 34738422  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| ||||||| |  ||||||| ||||||| ||||||| ||||||||||  |||| ||||||    
T  34738423 tccagtattcctcggatacgtccttggaaggaactcctcgccactggagctcaagtaacttg 34738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 13104848 - 13104908
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc 104  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  13104848 caaaggtagacgactaatttagctcatgcgtagaggcatgcgcactggccaagcgttgttc 13104908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 33634448 - 33634548
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgtt-gttcccctgggaatcgaatccggtattc 128  Q
    ||||| ||||||||||||||| || |||||||||||||| |||| || |||||| |||||||| || ||||  |||| |||||||||||| |||||||||    
T  33634448 ggttttcgatccaccaaaggtagatgactaattcggctcgtgcgcagcggcatgcgcactggctaaacgttatttcctctgggaatcgaacccggtattc 33634547  T
Q  129 c 129  Q
    |    
T  33634548 c 33634548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 44773370 - 44773211
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| ||| ||||||||  |||||||| ||||||| ||  |||||||||  |||||||||| |||||||  ||   ||||||||     
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgttttccctagaatcgaa- 44773272  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||   ||||| | |||||||| ||| ||| | | |||||||||| ||||||||||||||||    
T  44773271 cctagattccccgaatacgtccttgaaaggagcgccttgccactagagtccaagcaacttg 44773211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 26805403 - 26805328
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    |||| ||| |||||| ||| ||||||||||||| |||||||| || |||||||||||||||||| |||||||||||    
T  26805403 cttttgcatcggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaa 26805328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 21642056 - 21641994
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatg 83  Q
    |||||||||||||| ||| |||||||||| || ||| ||||||||||||||||||||||||||    
T  21642056 tttcgcaccggttttcgacccaccaaaggcgggcgattaattcggctcatgcgtagaggcatg 21641994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 183
Target Start/End: Original strand, 30721888 - 30722018
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgg-gaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||| || ||||| ||||||| |||| |||||| ||||| ||||||||||  | ||||| |||||| |||||  ||  |||||| ||| || ||||    
T  30721888 cgactaatccgactcatacgtagagacatgcgcactgaccaagtgttgttcccccagtgaatcaaatccgatattcaccatgtacgtccttgaaataaac 30721987  T
Q  153 tccttgccactggagtccaagcaacttgatt 183  Q
    |||||| || |||||||||||||||||||||    
T  30721988 tccttgtcattggagtccaagcaacttgatt 30722018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 2149243 - 2149355
Alignment:
Q  70 tgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa-tccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
    |||||||||||||| ||||||||||| |||| || |||| | |||||||| ||||||||||| || |||| || ||| |||||  |||||||||||||||    
T  2149243 tgcgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactggag 2149342  T
Q  168 tccaagcaacttg 180  Q
     |||| |||||||    
T  2149343 cccaaacaacttg 2149355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 14853365 - 14853527
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgt--agaggcatgggcactggccaagcgttgtt-cccctgggaatcg 116  Q
    ||||||||||| |||| ||||||| |||| |||||||||||| || |||||| ||  ||||||||  |||||||||||  |||||| ||||||  |||||    
T  14853365 ctttcgcaccgatttc-gatccactaaagatggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcg 14853463  T
Q  117 aatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||| |||||||| |  |||| || ||| ||| |  ||||||||||||||| |||| |||||||    
T  14853464 aatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaacaacttg 14853527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 15079556 - 15079429
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    ||||||||| ||||| ||||||||| ||||  |||||| ||||||||||| ||||||| ||||||| || ||||||| |   |||||| |||||||        
T  15079556 cgactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgt 15079457  T
Q  153 tccttgccactggagtccaagcaacttg 180  Q
    |||||||||| |||| ||||||||||||    
T  15079456 tccttgccaccggagcccaagcaacttg 15079429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 37804936 - 37805051
Alignment:
Q  66 ctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
    ||||||||||| |||||| ||||| |||||||||| || |||||| ||||||||||||||||| | |   |||||| |||| || |  ||||||||||||    
T  37804936 ctcatgcgtagcggcatgcgcactagccaagcgttattccccctgtgaatcgaatccggtatttctcgggtacgtccttgggaggagttccttgccactg 37805035  T
Q  165 gagtccaagcaacttg 180  Q
     || ||||||||||||    
T  37805036 tagcccaagcaacttg 37805051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 44023402 - 44023347
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgta 75  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||||    
T  44023402 ctttcgcaccggtttccaacccaccaaagatggacgactaattcgactcatgcgta 44023347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 44193589 - 44193425
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagagg---catgggcactggccaagcgttgttcccc-tgggaatc 115  Q
    |||||||||||||||| || ||||||| ||||| |||||||| | |||| |  |||||||   |||   ||| || ||||||||||||||| |   ||||    
T  44193589 ctttcgcaccggtttctgacccaccaatggtgggcgactaatccagctcgtatgtagaggagacattcacacgggtcaagcgttgttccccctaaaaatc 44193490  T
Q  116 gaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||| | |||||||| |  ||||||||||||||  | ||| |||||||||||||||||||||||||    
T  44193489 gaacctggtattcctcggatacgtcattggaaagagctcattgccactggagtccaagcaacttg 44193425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16813164 - 16813253
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctg 109  Q
    ||||||||| | ||||| | | ||||||| |||||||||||| |||||| ||| |||||||||| | ||||| ||| |||||||||||||    
T  16813164 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccctg 16813253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16852443 - 16852532
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctg 109  Q
    ||||||||| | ||||| | | ||||||| |||||||||||| |||||| ||| |||||||||| | ||||| ||| |||||||||||||    
T  16852443 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccctg 16852532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 25604655 - 25604594
Alignment:
Q  66 ctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtatt 127  Q
    ||||||||||||||||||   ||||| ||| |||||||||||||| ||||||||||||||||    
T  25604655 ctcatgcgtagaggcatgcatactggtcaaacgttgttcccctggaaatcgaatccggtatt 25604594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 41187922 - 41187813
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||| || |||||||||||||||||| ||||||| |||||||||||   |||  |||| |||| ||||||||| |  ||||||| ||||||| | |    
T  41187922 cgactaatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggagc 41187823  T
Q  153 tccttgccac 162  Q
    ||||||||||    
T  41187822 tccttgccac 41187813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 2785038 - 2784930
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    ||||||||||||||||||  || ||| | ||||||||||||  | |||||||||||||||||| |||||| ||||   ||||| |||||  |||||||      
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttccctgaaaatcgaact 2784939  T
Q  121 cggtattcc 129  Q
    |||||||||    
T  2784938 cggtattcc 2784930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 41187792 - 41187652
Alignment:
Q  44 caaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcat 142  Q
    |||| |||| ||||||||  | ||||||||||||||||||| |||||| |||| |||||| |||||   ||||||| |||||||||  || ||||||| |    
T  41187792 caaacgtgggcgactaatatgtctcatgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtcct 41187693  T
Q  143 tggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    | |||| | |||||||| ||| | |  ||||||||||||||    
T  41187692 tagaaggagctccttgctacttgcgcgcaagcaacttgatt 41187652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 29802864 - 29802754
Alignment:
Q  73 gtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtcca 171  Q
    ||||||||||| ||||||||||| ||||||| | | ||||||| ||||||| |||||  |  ||||||| ||||||  | ||| ||||||| ||||||||    
T  29802864 gtagaggcatgtgcactggccaaacgttgtttctcatgggaattgaatccgatattct-cggatacgtctttggaaagagctcattgccaccggagtcca 29802766  T
Q  172 agcaacttgatt 183  Q
    ||||||||||||    
T  29802765 agcaacttgatt 29802754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 44548723 - 44548774
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatg 71  Q
    |||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  44548723 ctttcgcaccagtttccgatccatcaaaggtggacgactaatctggctcatg 44548774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 31740763 - 31740921
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgt-tcccctgggaatcgaatcc 121  Q
    ||||||| |||| |||||||||||||||||||||||| |  | ||| ||| |||| ||||  |||||| |||||||||||   |||||  |||||||||     
T  31740763 tcgcaccagttttcgatccaccaaaggtggacgactagtctgactcgtgcctagaagcattcgcactgaccaagcgttgtaatccctgataatcgaatct 31740862  T
Q  122 ggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||||||  || |||||  ||||||  | |||||| |||| | ||| |||||||||||    
T  31740863 ggtattccttaagtacgttcttggaatgagctccttaccaccgaagttcaagcaacttg 31740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 792261 - 792208
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcg 73  Q
    |||| |||||||||||||| ||||||||| ||| |||||||| |||||||||||    
T  792261 cttttgcaccggtttccgacccaccaaagatgggcgactaatccggctcatgcg 792208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 18846220 - 18846365
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttg-ttcccctgggaatcgaa 118  Q
    ||||||||||||||| ||||||| ||| | ||  ||| ||||  ||||| | |||| ||||||| |||||| |||||||||| ||||||||  ||| |||    
T  18846220 ctttcgcaccggttttcgatccatcaatgatgagcgattaatctggctcgtacgtaaaggcatgcgcactgcccaagcgttgtttcccctgaaaattgaa 18846319  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactg 164  Q
    || | |||||| ||| |||||| ||| ||  |||||||| ||||||    
T  18846320 tcagatattcctcaagtacgtccttgaaatgaactccttaccactg 18846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 36480438 - 36480506
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggc 92  Q
    |||||||||| ||| ||| ||| |||||||||||||||    ||||||||||||||||||||| ||||||||    
T  36480438 tttcgcaccgattttcgacccatcaaaggtggacgactc---cggctcatgcgtagaggcatgcgcactggc 36480506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 1773644 - 1773700
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtaga 77  Q
    |||||||||||||| ||| ||||||| |||||||||||||| |  ||||||||||||    
T  1773644 tttcgcaccggttttcgacccaccaatggtggacgactaatccaactcatgcgtaga 1773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 35443873 - 35443925
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggca 81  Q
    |||||||||||||| |||   |||||||||||| |||||||||||||||||||    
T  35443873 cggtttccgatccatcaataatggacgactaatccggctcatgcgtagaggca 35443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 40968963 - 40969075
Alignment:
Q  69 atgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggag 167  Q
    ||||||||||||||  |||||| |||| |||||||  |||||| ||||||| ||||||||||   |  ||||| ||||||  ||||| |||||||| |||    
T  40968963 atgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccctgagaacgtccttggaatgaactcattgccactagag 40969062  T
Q  168 tccaagcaacttg 180  Q
     ||||||||||||    
T  40969063 cccaagcaacttg 40969075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 4080408 - 4080480
Alignment:
Q  111 gaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    ||||||||||| ||||| | |  ||||||||||||||| | || || | ||||||||||||| ||||||||||    
T  4080408 gaatcgaatccagtatttcccggatacgtcattggaaggagcttctcgtcactggagtccaaacaacttgatt 4080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 29299385 - 29299353
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtgg 52  Q
    ||||||||||||||||||| |||||||||||||    
T  29299385 ctttcgcaccggtttccgacccaccaaaggtgg 29299353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 1613 - 1774
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||| || ||||||| ||||||| |||||||    
T  1613 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaa 1712  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     | |||||||| ||   ||||||||||||| | |||||||||||| ||||||||||||||||    
T  1713 cctggtattccccaggcacgtcattggaaggagctccttgccacttgagtccaagcaacttg 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 9945 - 9794
Alignment:
Q  30 ggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattc 128  Q
    |||||| || |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | || |||| || ||||||| | ||||||| |||||||||| || |||||||    
T  9845 ctcagatacatccttggaaggagctccttgtcactggagtcaaaacaacttg 9794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 42831 - 42990
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| |||||| |||||| |||||| |||| |||||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaa 42930  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaact 178  Q
     ||| |||||| ||  ||| |  ||||||| | ||| |||||||||||||||||||||||    
T  42931 cccgatattccccaggtacattcttggaagtagctcgttgccactggagtccaagcaact 42990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 9551 - 9385
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcg-------tagaggcatgggcactggccaagcgttgtt-cccctggga 112  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||||       |||||||||    ||||||||||||||||| |||||||||    
T  9551 tttcgcaccggtttctgacccaccaaaggtggacgactaatttggctcatgcgtagaacttagaggcat-cttactggccaagcgttgttccccctggga 9453  T
Q  113 atcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||| |||||||||| ||| |||||| ||| ||| | |||||||  || |||| ||||||||||||    
T  9452 atcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttg 9385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 6965 - 6855
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  6965 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 6866  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  6865 cccggtattcc 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 8700 - 8810
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  8700 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 8799  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  8800 cccggtattcc 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 4e-34; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 319532 - 319372
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||  |||||||||||||||||||||| | |||||||| |||||| ||| ||||||||||||||||||| ||||| | |||| ||    
T  319532 ctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaa 319433  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |  ||||||| ||||||| | |||||||||||||||| || |||||||||    
T  319432 cccggtattccccggatacgtccttggaaggagctccttgccactggag-cctagcaacttg 319372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 680 - 519
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||||||  ||||||||  ||||||| ||||||||||||  |||||  |||| |||||| |||||| ||||||||    
T  680 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaa 581  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |   |||||| ||||||| | |||||||||||| ||| ||||||||||||    
T  580 cccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 412091 - 412186
Alignment:
Q  86 cactggccaagcgttgttcccc-tgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    ||||| |||||||||||||||| || ||||||||  ||||||||| |  ||||||| ||||||| | ||| | ||||||| || ||||||||||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaacttg 412186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 139491 - 139425
Alignment:
Q  74 tagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaatccggtattccacaaatacgt 139  Q
    |||||||||| |||||||||||||||||||||   ||||||||||| ||| |||||| || ||||||    
T  139491 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatacgt 139425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 12683 - 12524
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||  ||||| ||||||||| |||||||| || |||||||||||||||||| ||||||| ||||||||||| |||| |||||||||     
T  12683 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt-ccctaggaatcgaac 12585  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |||||||| | | | |||||| ||||||| | |||||||||||| ||| |||| |||||||    
T  12584 ccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttg 12524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 6073 - 5922
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatccggtattc 128  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||| || ||||||    
T  6073 cggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttgtccccctggaaatcgaacccagtattc 5974  T
Q  129 cacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |   |||| | ||| ||| | |||||||||||| ||  ||||||||||||    
T  5973 cccgggtacgcccttgaaaggagctccttgccactagaacccaagcaacttg 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 12780 - 12619
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcc-cctgggaatcgaa 118  Q
    |||||||||||||||| || ||| ||||||||| |||||||| ||| || ||||||||||||||  |||||||||||||||||||| |||  ||||||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaa 12681  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     |||||||||| |    ||||| ||||||| | || ||||||||| ||||||||||||||||    
T  12680 cccggtattccccgggcacgtccttggaaggagcttcttgccactagagtccaagcaacttg 12619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 155710 - 155809
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    |||||||||||| |||||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  155710 ctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 25784 - 25944
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaat 119  Q
    ||||||||||||||| || |||  ||||||||  |||||||  || ||| |||||||| |||| |||||||||||||||||||| |||| |||||||||     
T  25784 tttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaac 25883  T
Q  120 ccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    |  ||||||| | | |||||  ||||||| | ||| |||| ||||||| |||| |||||||    
T  25884 cttgtattccccgagtacgtacttggaaggagctctttgctactggagcccaaacaacttg 25944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 7834 - 7944
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||| |||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| |||||||||||| ||| |||||| |||||||| ||    
T  7834 ctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaa 7933  T
Q  119 tccggtattcc 129  Q
     ||||||||||    
T  7934 cccggtattcc 7944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 94979 - 95136
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaa-ggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaa 118  Q
    |||| |||||| ||||||| |||||||| ||||| |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||  ||| | |||||||    
T  94979 cttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtt-tcctagaaatcgaa 95077  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaac 177  Q
     | |||||||| |  |||| |  ||||||| | |||||||||| ||||| |||||||||    
T  95078 cctggtattccccggatactttcttggaaggagctccttgccattggagcccaagcaac 95136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 68621 - 68466
Alignment:
Q  23 tcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatcc 121  Q
    |||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||   |||||||||||| ||||||||||||||| ||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 68525  T
Q  122 ggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
    | |||| | |   |||||| ||||||| | |||||||||||| ||| |||| |||||||    
T  68524 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttg 68466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 41154 - 40988
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||| ||||||||||||  |||||||| ||| |||||||| |||||| ||||||||||||||  ||||| ||||| |||||||||| || ||||||||    
T  41154 ctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaa 41055  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgattgt 185  Q
     ||| ||||||   | ||||||  |||||| | |||||||||||||||| |||| ||||||| ||||    
T  41054 cccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttggttgt 40988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 26293 - 26132
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaa 118  Q
    ||||||||| |||||||||  || |||  ||||||||||||| |||||| ||||||||||||||  |||||||||||||||||| ||||||| |||||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 26194  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     || ||||||| ||  || ||| || |||| |  | ||||||||| ||||||||||||||||    
T  26193 cccagtattccccaggtatgtccttagaaggagtttcttgccactagagtccaagcaacttg 26132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 224427 - 224266
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttc-ccctgggaatcgaa 118  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||| ||| ||||||  ||| |||| ||| ||||| || |||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaa 224328  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttg 180  Q
     ||| |||||  | |||||||| || |||||  |||||||||||| |||  |||||||||||    
T  224327 cccgatattctccgaatacgtccttagaagatgctccttgccactagagctcaagcaacttg 224266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 186626 - 186464
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaatc 120  Q
    |||| ||||||||||||| |||| |||| || ||||||||| |||||| |||||||||||||| |||||| |||| | || ||| ||  | ||||||| |    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattctccctgaaatcgaacc 186527  T
Q  121 cggtattccacaaatacgtcattggaagaaactccttgccactggagtccaagcaacttgatt 183  Q
    || |||||  ||||||| || || ||||   |||||||||||| |||  ||| ||||||||||    
T  186526 cgatattctccaaatacatccttagaaggtgctccttgccactagagctcaaccaacttgatt 186464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 65151 - 65239
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccct 108  Q
    ||||||||||||||||||||| | |||| |||  |||||||| | |||||||||||||| |||| ||||||||||||||||||||||||    
T  65151 ctttcgcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgttcccct 65239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 8273 - 8175
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctgggaatcgaat 119  Q
    ||||||||||||||||||| | ||||||||||||||||||||           ||||||||||| |||||||||||||||||||||| |||||||||||     
T  8273 ctttcgcaccggtttccgacctaccaaaggtggacgactaat-----------gtagaggcatgcgcactggccaagcgttgttcccttgggaatcgaac 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 19364 - 19278
Alignment:
Q  21 tttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc 107  Q
    ||||||||||||||||||||||| ||   ||| |||||||| |||||||||||||||||  || ||||| |||||||||||||||||    
T  19364 tttcgcaccggtttccgatccactaataatggccgactaatccggctcatgcgtagaggtctgcgcactagccaagcgttgttcccc 19278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 25195 - 25106
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccctg 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |  |||||||||||  |||| |||||| ||||  ||||||||||||    
T  25195 ctttcgcaccggtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactgtccaaatgttgttcccctg 25106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 18698 - 18586
Alignment:
Q  64 ggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaactccttgccac 162  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||| ||||||||| ||||| |||  |   ||| || ||||||| | |||||||||||    
T  18698 ggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccac 18599  T
Q  163 tggagtccaagca 175  Q
    |||||||||||||    
T  18598 tggagtccaagca 18586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 271107 - 271239
Alignment:
Q  54 cgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccggtattccacaaatacgtcattggaagaaac 152  Q
    |||||||  |||||| ||||||||| |||| |||||| |||||||||||| ||||||||||||||| ||| |||||  |   |||||| ||||||| | |    
T  271107 cgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagc 271206  T
Q  153 tccttgccactggagtccaagcaacttgattgt 185  Q
    ||||||||||  ||| |||||||||||| ||||    
T  271207 tccttgccaccagagcccaagcaacttggttgt 271239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 219479 - 219404
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    |||| |||||||||| ||||||| |||||||||||||||||| | | || |||||||||||||| |||||||||||    
T  219479 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaa 219404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 250024 - 250099
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaa 95  Q
    ||||||||||| ||||||| |||||||||| |  |||||||| |||||| |||||||||||||| |||||||||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 250099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 51837 - 51735
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttccc-ctgggaatcgaa 118  Q
    ||||| |||||||||| |||||| ||||||||| ||||| || |||||| |||    || |||| |||||||||||||||||||||| ||||||||||||    
T  51837 ctttcacaccggtttcagatccatcaaaggtgggcgactgatccggctcgtgc----agacatgcgcactggccaagcgttgttccctctgggaatcgaa 51742  T
Q  119 tccggta 125  Q
     ||||||    
T  51741 cccggta 51735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 72742 - 72604
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgttcccc-tgggaatcgaa 118  Q
    |||||| ||||||||| ||||||||   | | | |||||||| ||||| |||| | |||||||| ||||||| ||||||||||||||| ||| |||||||    
T  72742 ctttcgtaccggtttcagatccacccttgataggcgactaatccggcttatgctttgaggcatgcgcactggtcaagcgttgttccccttggaaatcgaa 72643  T
Q  119 tccggtattccacaaatacgtcattggaagaaactccttg 158  Q
     |||||||||| |  ||||||| ||||||| | |||||||    
T  72642 cccggtattcc-ctgatacgtccttggaaggagctccttg 72604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 16989 - 16906
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt 103  Q
    |||||||| |||||||| | ||||||||||||  ||||||||  ||||| ||||||||| |||  |||||| ||||||||||||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtt 16906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 17491 - 17397
Alignment:
Q  29 cggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagaggcatgggcactggccaagcgttgtt-cccctgggaatcgaatccg 122  Q
    |||||||||| ||| ||| ||||| |||||||| |||||| || ||||| ||||| ||||||| ||||| || || |||||| ||||||||||||    
T  17491 cggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagcattttttcccctgagaatcgaatccg 17397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 58032 - 58091
Alignment:
Q  20 ctttcgcaccggtttccgatccaccaaaggtggacgactaattcggctcatgcgtagagg 79  Q
    ||||||||||||| ||||||||||||||| | | |||||||| |  ||||||||||||||    
T  58032 ctttcgcaccggtatccgatccaccaaagataggcgactaatccaactcatgcgtagagg 58091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University