View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14569_high_4 (Length: 314)
Name: NF14569_high_4
Description: NF14569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14569_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 304
Target Start/End: Original strand, 34964720 - 34965008
Alignment:
| Q |
16 |
catgaaagaacccacggagaaagcattatgaaagaacatgaaaaggtttattggcattgaatgtaacttgtatgagtactatgaatgtgacgtattagtg |
115 |
Q |
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| T |
34964720 |
catgaaagaacccacggagaaagcattatgaaagagcatgaaaaggtttattggcattgaatgtaacttgtgtgagtactatgaatgtgacgtattagtg |
34964819 |
T |
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| Q |
116 |
ttagggacgcaagcaaagcaatcaagcattgattaaatcaatatatgaatatggttaaagccagaaattgtggcactgggtaacccactgacttgatcca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34964820 |
ttagggacgcaagcaaagcaatcaagcattgattaaatcaatatatgaatatggttaaagccagaaattgtggcactgggtaacccactgacttgatcca |
34964919 |
T |
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| Q |
216 |
ctcctgacctcttccattgccaaatgaaaaagcaatatatggcacagccatagagaatgtactatagtaatgcttttcttcttcttttc |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34964920 |
ctcctgacctcttccattgccaaatgaaaaagcaatatatggcacagccatagagaatgtactatagtaatgcttttcttcttcttttc |
34965008 |
T |
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