View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14569_low_3 (Length: 327)

Name: NF14569_low_3
Description: NF14569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14569_low_3
NF14569_low_3
[»] chr2 (29 HSPs)
chr2 (18-314)||(13780736-13781029)
chr2 (221-314)||(34817777-34817870)
chr2 (221-327)||(12415448-12415554)
chr2 (221-327)||(12427508-12427614)
chr2 (221-327)||(43114563-43114669)
chr2 (221-327)||(11825642-11825748)
chr2 (221-327)||(34895729-34895835)
chr2 (221-326)||(41281963-41282068)
chr2 (221-321)||(966828-966928)
chr2 (221-321)||(18491711-18491811)
chr2 (221-321)||(16803974-16804074)
chr2 (221-321)||(16843256-16843356)
chr2 (253-327)||(4451938-4452012)
chr2 (221-327)||(4299408-4299514)
chr2 (221-311)||(8896587-8896677)
chr2 (221-314)||(1750420-1750513)
chr2 (221-314)||(30838638-30838731)
chr2 (279-327)||(12531651-12531699)
chr2 (221-314)||(4764727-4764820)
chr2 (221-314)||(12302254-12302347)
chr2 (230-327)||(14285691-14285788)
chr2 (221-314)||(16096753-16096846)
chr2 (221-314)||(19047163-19047256)
chr2 (221-314)||(43335764-43335857)
chr2 (224-294)||(33229310-33229381)
chr2 (221-314)||(43490402-43490495)
chr2 (221-300)||(6518484-6518562)
chr2 (221-311)||(42026773-42026865)
chr2 (257-309)||(42849864-42849916)
[»] chr4 (37 HSPs)
chr4 (221-327)||(17619140-17619246)
chr4 (221-327)||(55272364-55272470)
chr4 (221-321)||(711966-712066)
chr4 (221-314)||(28988479-28988572)
chr4 (221-327)||(32728363-32728469)
chr4 (221-327)||(48435567-48435673)
chr4 (221-320)||(3756242-3756340)
chr4 (253-327)||(35037043-35037117)
chr4 (221-314)||(41327544-41327637)
chr4 (221-314)||(27893843-27893936)
chr4 (221-314)||(41847977-41848070)
chr4 (221-314)||(41878412-41878505)
chr4 (221-309)||(27864570-27864658)
chr4 (255-327)||(38851553-38851625)
chr4 (221-309)||(48463456-48463544)
chr4 (224-314)||(43949802-43949893)
chr4 (229-314)||(27316714-27316799)
chr4 (221-314)||(33703147-33703240)
chr4 (221-314)||(35017739-35017831)
chr4 (253-321)||(19879992-19880060)
chr4 (234-314)||(39631120-39631200)
chr4 (221-321)||(46827700-46827800)
chr4 (221-303)||(1771278-1771360)
chr4 (221-303)||(55966358-55966440)
chr4 (221-321)||(960864-960964)
chr4 (257-327)||(36004104-36004174)
chr4 (225-314)||(25051703-25051792)
chr4 (221-314)||(27550315-27550408)
chr4 (221-314)||(45490314-45490407)
chr4 (221-303)||(43514698-43514780)
chr4 (221-302)||(28982835-28982916)
chr4 (221-314)||(31680908-31681001)
chr4 (221-295)||(49229684-49229758)
chr4 (221-314)||(12496962-12497055)
chr4 (221-314)||(23035986-23036079)
chr4 (221-314)||(23204779-23204872)
chr4 (221-266)||(30189279-30189324)
[»] chr3 (26 HSPs)
chr3 (221-327)||(10457880-10457986)
chr3 (221-327)||(25996274-25996380)
chr3 (221-326)||(9434130-9434235)
chr3 (221-321)||(4190259-4190359)
chr3 (221-320)||(52627972-52628071)
chr3 (221-303)||(42100694-42100776)
chr3 (221-314)||(27748569-27748662)
chr3 (221-314)||(46941059-46941152)
chr3 (230-314)||(51249323-51249407)
chr3 (221-327)||(34791835-34791941)
chr3 (223-321)||(51757601-51757699)
chr3 (221-314)||(40808871-40808964)
chr3 (221-309)||(45126934-45127022)
chr3 (221-315)||(53273684-53273778)
chr3 (221-314)||(54237102-54237195)
chr3 (221-314)||(24688403-24688496)
chr3 (221-314)||(25413687-25413780)
chr3 (221-314)||(36150136-36150229)
chr3 (221-314)||(40480755-40480848)
chr3 (221-314)||(42394420-42394513)
chr3 (221-314)||(47191027-47191119)
chr3 (221-314)||(54246149-54246242)
chr3 (221-314)||(53581859-53581952)
chr3 (221-300)||(29558249-29558328)
chr3 (227-314)||(11064723-11064810)
chr3 (257-314)||(52629870-52629927)
[»] chr1 (22 HSPs)
chr1 (221-327)||(38335924-38336030)
chr1 (221-327)||(48119634-48119740)
chr1 (221-327)||(35003300-35003406)
chr1 (221-327)||(46168389-46168495)
chr1 (221-326)||(44112683-44112788)
chr1 (221-327)||(38113183-38113289)
chr1 (221-327)||(45427733-45427839)
chr1 (221-327)||(45639720-45639826)
chr1 (221-314)||(37814784-37814877)
chr1 (221-314)||(43571087-43571180)
chr1 (253-327)||(26585500-26585574)
chr1 (221-321)||(41065159-41065259)
chr1 (253-327)||(45705863-45705937)
chr1 (221-327)||(35000101-35000207)
chr1 (221-314)||(5489782-5489875)
chr1 (221-309)||(2497568-2497656)
chr1 (224-314)||(4401336-4401427)
chr1 (221-314)||(23989524-23989618)
chr1 (221-314)||(24769500-24769593)
chr1 (221-314)||(48498963-48499056)
chr1 (221-314)||(750306-750399)
chr1 (221-314)||(7447832-7447924)
[»] chr7 (26 HSPs)
chr7 (221-327)||(31513293-31513399)
chr7 (221-327)||(31408621-31408727)
chr7 (221-326)||(40236925-40237030)
chr7 (221-314)||(4638200-4638293)
chr7 (221-314)||(5194232-5194325)
chr7 (221-327)||(33384876-33384983)
chr7 (221-314)||(35069727-35069820)
chr7 (221-314)||(43317449-43317542)
chr7 (221-327)||(27535219-27535325)
chr7 (224-314)||(32029818-32029908)
chr7 (221-314)||(10573755-10573848)
chr7 (221-314)||(24001013-24001106)
chr7 (221-314)||(24280597-24280690)
chr7 (221-314)||(42538432-42538525)
chr7 (221-314)||(45326026-45326119)
chr7 (221-309)||(26898408-26898496)
chr7 (221-309)||(44326184-44326272)
chr7 (221-314)||(5015401-5015494)
chr7 (221-314)||(5810925-5811018)
chr7 (221-314)||(16180358-16180450)
chr7 (221-314)||(43343625-43343718)
chr7 (221-314)||(44416935-44417028)
chr7 (221-303)||(42972858-42972940)
chr7 (221-314)||(41861680-41861775)
chr7 (221-303)||(9216308-9216389)
chr7 (252-314)||(38160580-38160642)
[»] chr6 (18 HSPs)
chr6 (221-327)||(33242409-33242515)
chr6 (221-327)||(27441548-27441654)
chr6 (221-314)||(3213406-3213499)
chr6 (221-327)||(33253919-33254026)
chr6 (221-314)||(13743222-13743315)
chr6 (221-314)||(13748722-13748815)
chr6 (221-314)||(26670010-26670103)
chr6 (221-327)||(31109210-31109316)
chr6 (221-314)||(7292753-7292846)
chr6 (221-314)||(21293678-21293771)
chr6 (221-309)||(7367555-7367643)
chr6 (221-314)||(7273336-7273429)
chr6 (221-314)||(9698334-9698427)
chr6 (221-309)||(24203993-24204081)
chr6 (221-314)||(26466805-26466898)
chr6 (221-314)||(30014349-30014442)
chr6 (221-314)||(30735988-30736081)
chr6 (221-314)||(21279935-21280028)
[»] chr5 (14 HSPs)
chr5 (221-327)||(17208080-17208186)
chr5 (221-327)||(32473382-32473488)
chr5 (221-326)||(30622708-30622812)
chr5 (221-314)||(41334664-41334757)
chr5 (221-314)||(5257001-5257094)
chr5 (221-314)||(7617139-7617232)
chr5 (221-314)||(2614650-2614743)
chr5 (221-314)||(22512311-22512404)
chr5 (221-314)||(38470585-38470678)
chr5 (221-314)||(18033988-18034081)
chr5 (221-314)||(33801475-33801568)
chr5 (223-314)||(39122434-39122524)
chr5 (221-263)||(25915039-25915081)
chr5 (221-267)||(33855091-33855137)
[»] scaffold0003 (1 HSPs)
scaffold0003 (221-327)||(45707-45813)
[»] chr8 (26 HSPs)
chr8 (221-326)||(35181522-35181627)
chr8 (221-327)||(16603614-16603720)
chr8 (221-326)||(34304794-34304899)
chr8 (221-327)||(33629981-33630087)
chr8 (221-314)||(42295201-42295294)
chr8 (228-327)||(16358821-16358920)
chr8 (257-327)||(10678140-10678210)
chr8 (221-327)||(18066706-18066812)
chr8 (221-314)||(29800951-29801044)
chr8 (223-314)||(1375550-1375641)
chr8 (221-314)||(5754909-5755002)
chr8 (221-314)||(11582772-11582865)
chr8 (221-314)||(29705368-29705461)
chr8 (221-314)||(36743484-36743577)
chr8 (224-314)||(40528635-40528726)
chr8 (221-314)||(26125641-26125734)
chr8 (221-314)||(42197436-42197529)
chr8 (221-309)||(20148766-20148854)
chr8 (221-309)||(42699263-42699351)
chr8 (223-314)||(2165964-2166055)
chr8 (264-327)||(19386553-19386616)
chr8 (221-314)||(30660743-30660836)
chr8 (221-302)||(30912575-30912656)
chr8 (223-314)||(31384672-31384763)
chr8 (221-303)||(45397322-45397404)
chr8 (221-314)||(2547002-2547095)
[»] scaffold0100 (1 HSPs)
scaffold0100 (221-327)||(35444-35550)
[»] scaffold0119 (1 HSPs)
scaffold0119 (221-314)||(691-784)
[»] scaffold0385 (1 HSPs)
scaffold0385 (225-314)||(11261-11350)
[»] scaffold0038 (1 HSPs)
scaffold0038 (221-314)||(112661-112754)
[»] scaffold0187 (2 HSPs)
scaffold0187 (221-314)||(14189-14282)
scaffold0187 (221-314)||(24517-24610)
[»] scaffold0157 (1 HSPs)
scaffold0157 (221-314)||(23422-23515)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 8e-92; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 13781029 - 13780736
Alignment:
Q  18 atagattcctcgtcattgtcctatgattaaagtataacaatgatgaaatttctataggtttaatttaccttggtgcttctacttattgtgttgtaatagt 117  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13781029 atagattcctcgacattgtcctatgattaa-gtataacaatgatgaaatttctataggtttaatttaccttggtgcttctacttattgttttgtaatagt 13780931  T
Q  118 agtgttgttgtgatcctcgatggtctttctacaattcttagcaaaaatattaatcaagnnnnnnnngagtgttatgtctcttaatcctttnnnnnnnnnn 217  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||         |||||||||||||||||||||||              
T  13780930 agtgttgttgtgatcctcgatggtctttctacaaatcttagc--aaatattaatcaagtttttttttagtgttatgtctcttaatcctttaaaaaatgga 13780833  T
Q  218 nnntgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
       |||||||| ||||| ||||||||||||||||||||||||||||||| || || |||||||||| ||||||||||||||||||| ||||||||||    
T  13780832 aaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 34817870 - 34817777
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  34817870 tgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 12415554 - 12415448
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||||||||||||||||||||||||    
T  12415554 tgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttcatct 12415455  T
Q  321 catctcc 327  Q
    | |||||    
T  12415454 cctctcc 12415448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 12427614 - 12427508
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||||||||||||||||||||||||||    
T  12427614 tgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttcatct 12427515  T
Q  321 catctcc 327  Q
    | |||||    
T  12427514 cctctcc 12427508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 43114563 - 43114669
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  43114563 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttcatct 43114662  T
Q  321 catctcc 327  Q
    | |||||    
T  43114663 cctctcc 43114669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 11825748 - 11825642
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| || ||| |||||||||| |||||||||||| |||||||||||||||||||    
T  11825748 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctttcatct 11825649  T
Q  321 catctcc 327  Q
    | |||||    
T  11825648 cctctcc 11825642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 34895835 - 34895729
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| |||||||||  ||||||||||||||||| || ||| || |||||||||||||||||||| |||||||| ||||||||||    
T  34895835 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 34895736  T
Q  321 catctcc 327  Q
    | |||||    
T  34895735 cctctcc 34895729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 41282068 - 41281963
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| || ||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  41282068 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctttcatct 41281969  T
Q  321 catctc 326  Q
    | ||||    
T  41281968 cctctc 41281963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 966928 - 966828
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| |||| |  |||||||||||||||||||||| |||||||||||||||||||    
T  966928 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctttcatct 966829  T
Q  321 c 321  Q
    |    
T  966828 c 966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 18491711 - 18491811
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||||||| |||||| |||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  18491711 tgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctttcatct 18491810  T
Q  321 c 321  Q
    |    
T  18491811 c 18491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 16803974 - 16804074
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||||| |||||||| || ||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  16803974 tgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttcatct 16804073  T
Q  321 c 321  Q
    |    
T  16804074 c 16804074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 16843256 - 16843356
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||||| |||||||| || ||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  16843256 tgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttcatct 16843355  T
Q  321 c 321  Q
    |    
T  16843356 c 16843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 4452012 - 4451938
Alignment:
Q  253 attgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4452012 attgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctcctctcc 4451938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 4299514 - 4299408
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||| ||||||||| |||| ||| |||||  ||||||||| ||||||| ||| || ||||||||||||||||||||||| ||||||| |||||| ||||    
T  4299514 tgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatacttactctttaatct 4299415  T
Q  321 catctcc 327  Q
    | |||||    
T  4299414 cctctcc 4299408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 311
Target Start/End: Complemental strand, 8896677 - 8896587
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttct 311  Q
    ||||||||||||||| ||||||||||||   |||||||||||| || || || | ||||||||||||||||||||||||| || |||||||    
T  8896677 tgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacactttct 8896587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 1750420 - 1750513
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||| |||||||||||| ||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  1750420 tgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 30838638 - 30838731
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||| || ||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  30838638 tgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 12531699 - 12531651
Alignment:
Q  279 ttttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12531699 ttttggtaaattcatctcacaaccatactttctctttcatctcctctcc 12531651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 4764820 - 4764727
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||  |||||  ||||||||||||||| | ||   |||||||||||||||||||||||||||| ||||| ||||    
T  4764820 tgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 12302347 - 12302254
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||||| |||||||||||| ||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  12302347 tgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 14285691 - 14285788
Alignment:
Q  230 aacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    |||||| |||| ||| |||||  ||||||||||| ||  | ||| ||||||||||||||||||||||| |  |||||||||||||||||||| |||||    
T  14285691 aacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctcagagtcatactttctctttcatctcctctcc 14285788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 16096753 - 16096846
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||| |||| ||||||||||| | || |||||||||||| | || |||||||||||| ||||| ||||    
T  16096753 tgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 19047163 - 19047256
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  |||   |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  19047163 tgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 19047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 43335857 - 43335764
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||| ||||||| | |||||||  ||||||||||||||| |||||| | || |||||||||||||| ||||||||||||| | ||||| ||||    
T  43335857 tgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatctt 43335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 33229310 - 33229381
Alignment:
Q  224 tacatgaacacc-ttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatc 294  Q
    |||||||||||| ||||||||  |||||||||||||||||||||| | || |||||||||||||| ||||||    
T  33229310 tacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 43490495 - 43490402
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||| | ||| | || |||||||||||||| ||||||||| ||||| ||||| ||||    
T  43490495 tgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatctt 43490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 6518562 - 6518484
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaa 300  Q
    |||||||||||||||||| || || ||||   ||||||||||||||||| || ||| |||||||||| ||||||||||||    
T  6518562 tgttacatgaacacctttaat-catacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 42026773 - 42026865
Alignment:
Q  221 tgttacatgaacacct--tttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttct 311  Q
    |||||||||||||||   |||||||| |||   ||||||||| |||  ||| || ||||||||||| |||||||||||||||| | |||||||    
T  42026773 tgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactttct 42026865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 42849916 - 42849864
Alignment:
Q  257 tacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    ||||||||||| | || |||||||||| ||| ||||||||||||||| |||||    
T  42849916 tacaccccatgtattagggatattttgataagttcatctcacaaccacacttt 42849864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 17619246 - 17619140
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    |||||||||||||||||||| ||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17619246 tgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 17619147  T
Q  321 catctcc 327  Q
    | |||||    
T  17619146 cctctcc 17619140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 55272470 - 55272364
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||| | |||| ||| ||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272470 tgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 55272371  T
Q  321 catctcc 327  Q
    | |||||    
T  55272370 cctctcc 55272364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 711966 - 712066
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  711966 tgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctttcatct 712065  T
Q  321 c 321  Q
    |    
T  712066 c 712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 28988479 - 28988572
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||||||| ||||| ||||||||||    
T  28988479 tgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 32728363 - 32728469
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||| | |||| ||| |||||  ||||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  32728363 tgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctttcatct 32728462  T
Q  321 catctcc 327  Q
    | |||||    
T  32728463 cctctcc 32728469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 48435673 - 48435567
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| |||||||||  ||||||||||||||||| || ||| || |||||||||||||||||||| |||||||| ||||||||||    
T  48435673 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 48435574  T
Q  321 catctcc 327  Q
    | |||||    
T  48435573 cctctcc 48435567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 320
Target Start/End: Complemental strand, 3756340 - 3756242
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||| ||||||||||    
T  3756340 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctttcatct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 35037043 - 35037117
Alignment:
Q  253 attgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||    
T  35037043 attgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctttcttctcctctcc 35037117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 41327637 - 41327544
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||  ||||| |||||||||||||| |||||||||||  |||||||| ||| |||||||||||||||||||||| ||| ||||||||||    
T  41327637 tgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 27893936 - 27893843
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| ||| | |||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  27893936 tgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 27893843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 41847977 - 41848070
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||| ||||| | ||| ||||||||||||||||||||||||||||| ||  || ||||||| ||||||||| |||||||| ||||||||||    
T  41847977 tgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 41878412 - 41878505
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  |||||||| |||||||||||||||||| || || || |||||||||| ||| ||||||||||||||| || |||||||    
T  41878412 tgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctctt 41878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 27864570 - 27864658
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||| |||||| |||||||| ||| | |||||||||||||||| | || |||||||||||||| ||||||||||||||| |||||    
T  27864570 tgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 27864658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 38851553 - 38851625
Alignment:
Q  255 tgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||| ||||||| || ||| |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  38851553 tgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttcatctcctctcc 38851625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 48463544 - 48463456
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||| |||||| |||||||| |||  |||||||||| |||||| | || |||||||||||||| |||||||||||||||||||||    
T  48463544 tgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatacttt 48463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 43949893 - 43949802
Alignment:
Q  224 tacatgaacacc-ttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||| ||||||||   ||||||||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  43949893 tacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 27316799 - 27316714
Alignment:
Q  229 gaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||| |||||||  |||||||||| ||||||||||| | ||||||||||||||||| ||||||||| ||||| ||||| ||||    
T  27316799 gaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 33703147 - 33703240
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||| || ||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  33703147 tgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 35017739 - 35017831
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  | | |||||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  35017739 tgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcacaaccacactttatctt 35017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 19879992 - 19880060
Alignment:
Q  253 attgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 321  Q
    ||||||||||||||  | || ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19879992 attgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctc 19880060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 39631120 - 39631200
Alignment:
Q  234 ccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||  ||||||||||||||||| |||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  39631120 ccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 39631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 46827800 - 46827700
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||||   ||||||||||| ||||| |||| |  |||||||||||| ||||||||| |||| ||||||||||||||    
T  46827800 tgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctttcatct 46827701  T
Q  321 c 321  Q
    |    
T  46827700 c 46827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 1771360 - 1771278
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||||| | ||  ||||||||| ||| |||||||||||||||    
T  1771360 tgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaacca 1771278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 55966440 - 55966358
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    |||||||| |||||| |||||||| ||| | ||||||||| |||||| | || |||||||||||||| |||||||||||||||    
T  55966440 tgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 55966358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 960964 - 960864
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||||   ||||||||||| || || || ||| |||||||||||||||||| | || | |||||||||||||||||    
T  960964 tgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtactttctctttcatct 960865  T
Q  321 c 321  Q
    |    
T  960864 c 960864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 36004174 - 36004104
Alignment:
Q  257 tacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||||  | || ||| |||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  36004174 tacaccccatatattagggacattttgataaatttatctcacaaccatactttctctttcatctcctctcc 36004104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 25051703 - 25051792
Alignment:
Q  225 acatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||  |||||||  ||||| |||||||||||| ||| | || |||||||||||||| |||||||||||| || ||||| ||||    
T  25051703 acatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatctt 25051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 27550315 - 27550408
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||||  ||||||||||| |||| | || |||||||||||||| ||||||| ||||||| ||||| ||||    
T  27550315 tgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 45490407 - 45490314
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||| ||||||| | ||| |  |||||||||| |||| | || ||||| ||| |||||||||||||||||||| ||||| ||||    
T  45490407 tgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatctt 45490314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 43514780 - 43514698
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    ||||||||||||||| |||||||  ||||  ||||||||||  |||| | || || ||||||||||| |||||||||||||||    
T  43514780 tgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaacca 43514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 28982916 - 28982835
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacc 302  Q
    ||||||||||||||| ||||||   |||||  |||||||| |||||  | || |||||||||||||| ||||||||||||||    
T  28982916 tgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaacc 28982835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 31680908 - 31681001
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||| | |||||| |||||||| |||   ||||||||||||| |  | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  31680908 tgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatctt 31681001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 49229758 - 49229684
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatct 295  Q
    ||||| ||||||| | |||| ||| |||||  |||||||||  |||||| |||||||||| ||||||||||||||    
T  49229758 tgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 12496962 - 12497055
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||| ||||||||| |||||||  ||||  ||||||||| |||||| | ||  ||||||||||||| ||||||| |||| || ||||| ||||    
T  12496962 tgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 23035986 - 23036079
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||  | |||||||  |||||  ||||||||||| ||  | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  23035986 tgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 23204872 - 23204779
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  |||||||  ||| | ||||||||| || ||| | || ||||||||| |||| ||||| ||||||||| ||||| ||||    
T  23204872 tgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatctt 23204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 30189279 - 30189324
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccat 266  Q
    ||||||||||||||| |||||||||||||  ||| |||||||||||    
T  30189279 tgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 10457986 - 10457880
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    |||||||||||||||||||| ||| |||||  ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10457986 tgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttcatct 10457887  T
Q  321 catctcc 327  Q
    | |||||    
T  10457886 cctctcc 10457880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 25996274 - 25996380
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||| || ||||||||||||||  | |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  25996274 tgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaaccatattttctctttcatct 25996373  T
Q  321 catctcc 327  Q
    | |||||    
T  25996374 cctctcc 25996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 9434130 - 9434235
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||||   ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  9434130 tgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttcatct 9434229  T
Q  321 catctc 326  Q
    | ||||    
T  9434230 cctctc 9434235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 4190359 - 4190259
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||  ||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  4190359 tgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctttcatct 4190260  T
Q  321 c 321  Q
    |    
T  4190259 c 4190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 320
Target Start/End: Complemental strand, 52628071 - 52627972
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    |||||| |||||||| |||| ||| ||| |  |||||||||| |||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  52628071 tgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctttcatct 52627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 42100694 - 42100776
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||| | || |||||||||||||| |||||||||||||||    
T  42100694 tgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 42100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 27748569 - 27748662
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||||| |||||||||| ||||||  ||| | || |||||||||||||| ||||||||||||| ||||||| ||||    
T  27748569 tgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatctt 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 46941059 - 46941152
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  46941059 tgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 51249323 - 51249407
Alignment:
Q  230 aacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||| ||||||||| || | |||| |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  51249323 aacaccctttattcacccaacccattatacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 34791835 - 34791941
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||| ||| |||||| || ||| |||||  ||| ||||||||||||||||||||||||||||||||    
T  34791835 tgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctttcatct 34791934  T
Q  321 catctcc 327  Q
    | |||||    
T  34791935 cctctcc 34791941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 51757601 - 51757699
Alignment:
Q  223 ttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 321  Q
    |||||| |||||| |||| ||| |||||  |||||||||| |||||| || ||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  51757601 ttacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctttcatctc 51757699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 40808871 - 40808964
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||  ||||| |||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  40808871 tgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40808964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 45127022 - 45126934
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||| |||||| |||||||| ||| | |||||||||||||||| | || |||||||||||||| ||||||||||||||| |||||    
T  45127022 tgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 45126934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 315
Target Start/End: Complemental strand, 53273778 - 53273684
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctcttt 315  Q
    ||||| ||||||| | |||||||  | ||||||||||||| |||||| | || |||||||||||||| ||||||||||||||||||||| |||||    
T  53273778 tgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 54237102 - 54237195
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  54237102 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 54237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 24688496 - 24688403
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||||  |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  24688496 tgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 25413687 - 25413780
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||| |||||||||||  ||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  25413687 tgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 36150136 - 36150229
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||| ||| |||||||| ||||| |||| ||||||| ||| |  | |||||||||||||| ||||||||||||||| ||||| ||||    
T  36150136 tgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 40480755 - 40480848
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| |  || ||||||||| || ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  40480755 tgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 42394513 - 42394420
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  |||   |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  42394513 tgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 47191119 - 47191027
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||||||||||||| |||||| | ||  ||||||||| ||| ||||||||||||||| ||||| ||||    
T  47191119 tgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcacaaccacactttatctt 47191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 54246242 - 54246149
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||| |||||||||||| ||| | ||  |||||||| |||| ||||||||||||||| ||||| ||||    
T  54246242 tgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 53581952 - 53581859
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  |||||||| ||||  ||||||||| || ||| | || |||||||||| ||| ||||||||||||||| ||||| ||||    
T  53581952 tgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatctt 53581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 29558328 - 29558249
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaa 300  Q
    ||||| ||||||||| |||||||| ||| |||||||||||||| ||  | || | |||| ||||||||||||||||||||    
T  29558328 tgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaa 29558249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 11064810 - 11064723
Alignment:
Q  227 atgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||| | |||||||| |||||||||||||||||| ||||  ||  ||||||||| | ||||||||||| || || |||| |||||    
T  11064810 atgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatctcataatcacacttactctt 11064723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 52629870 - 52629927
Alignment:
Q  257 tacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||| ||| | |||||||||||| |||| ||||||||||||||| ||||| ||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatctt 52629927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 38335924 - 38336030
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38335924 tgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 38336023  T
Q  321 catctcc 327  Q
    | |||||    
T  38336024 cctctcc 38336030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 48119634 - 48119740
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48119634 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 48119733  T
Q  321 catctcc 327  Q
    | |||||    
T  48119734 cctctcc 48119740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 35003300 - 35003406
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35003300 tgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 35003399  T
Q  321 catctcc 327  Q
    | |||||    
T  35003400 cctctcc 35003406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 46168389 - 46168495
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| | | |  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46168389 tgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 46168488  T
Q  321 catctcc 327  Q
    | |||||    
T  46168489 cctctcc 46168495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 44112683 - 44112788
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  44112683 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttcatct 44112782  T
Q  321 catctc 326  Q
    | ||||    
T  44112783 cctctc 44112788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 38113289 - 38113183
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||| ||||||||| |||| ||| |||||  ||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  38113289 tgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatacttactctttcatct 38113190  T
Q  321 catctcc 327  Q
    | |||||    
T  38113189 cctctcc 38113183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 45427839 - 45427733
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||| |||||||| ||| |||||  ||||||||| ||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  45427839 tgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctttcatct 45427740  T
Q  321 catctcc 327  Q
    | |||||    
T  45427739 cctctcc 45427733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 45639826 - 45639720
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||  |||| ||| ||| |  |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45639826 tgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctttcatct 45639727  T
Q  321 catctcc 327  Q
    | |||||    
T  45639726 cctctcc 45639720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 37814784 - 37814877
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||| ||||    
T  37814784 tgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 43571180 - 43571087
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  43571180 tgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 26585500 - 26585574
Alignment:
Q  253 attgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||    
T  26585500 attgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctttcatctcctctcc 26585574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 41065159 - 41065259
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||   |||||||||||||||| || ||  |||||||||| |||||||||||||||||||||||||||| |||    
T  41065159 tgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctttcctct 41065258  T
Q  321 c 321  Q
    |    
T  41065259 c 41065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 45705863 - 45705937
Alignment:
Q  253 attgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||| ||||||| || ||| |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  45705863 attgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttcatctcctctcc 45705937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 35000207 - 35000101
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    |||||||||||||||||||| ||| ||||   |||||| ||  |||| | || ||| |||||| |||||| |||||||||||||||||||||||||||||    
T  35000207 tgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctttcatct 35000108  T
Q  321 catctcc 327  Q
    | |||||    
T  35000107 cctctcc 35000101  T

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Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 5489782 - 5489875
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  5489782 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 2497656 - 2497568
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||| |||||| |||||||| |||   |||||||||||||||  | ||||||||||||||||| ||||||||||||||| |||||    
T  2497656 tgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacacttt 2497568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 4401336 - 4401427
Alignment:
Q  224 tacatgaacac-cttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||| | ||  ||||||||||||| ||||||||||||||| ||||| ||||    
T  4401336 tacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatctt 4401427  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 23989618 - 23989524
Alignment:
Q  221 tgttacatgaacacc-ttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||||| ||||   |||||| |||| ||| | || ||||||||||||||||| |||||||||||| ||||| ||||    
T  23989618 tgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatctt 23989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 24769593 - 24769500
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||| |||||||||||||||||   ||||  |||||||||||||||| | || |||||||||||||| ||| | ||||||||| ||||| ||||    
T  24769593 tgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatctt 24769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 48499056 - 48498963
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  ||||||   ||||  ||||||||||| |||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  48499056 tgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 750399 - 750306
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||| |||||||| ||  |||  ||||| |||||||||||||||| |  | |||||||||| ||||||||||||| ||||| ||||| ||||    
T  750399 tgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 7447832 - 7447924
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||| | |||||||  ||| | |||||||||||| ||| | ||  ||||||||| ||| ||||||||||||||| ||||| ||||    
T  7447832 tgttacatgaacatcctttattcctacatcccattgtacaccc-atgtattacagatattttgataagttcatctcacaaccacactttatctt 7447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 31513293 - 31513399
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||  |||| ||| |||||  |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31513293 tgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 31513392  T
Q  321 catctcc 327  Q
    | |||||    
T  31513393 cctctcc 31513399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 31408727 - 31408621
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||||   |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31408727 tgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctttcatct 31408628  T
Q  321 catctcc 327  Q
    | |||||    
T  31408627 cctctcc 31408621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 40236925 - 40237030
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||| |  ||||||||||||||||| || ||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  40236925 tgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctttcatct 40237024  T
Q  321 catctc 326  Q
    | ||||    
T  40237025 cctctc 40237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 4638293 - 4638200
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||||| ||||   ||||||||||||||  | || |||||||||||||| ||||||||||||||||||||| ||||    
T  4638293 tgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 5194325 - 5194232
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| |||||||||||||||||| |||   ||||||||||||| |||||||||||||||| || |||| |||||    
T  5194325 tgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactctt 5194232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 33384876 - 33384983
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctc-attgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatc 319  Q
    ||||||||||||| | |||| ||| ||||| | |||||| || ||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  33384876 tgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctctttcatc 33384975  T
Q  320 tcatctcc 327  Q
    || |||||    
T  33384976 tcctctcc 33384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 35069727 - 35069820
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  |||||||  ||||||||||||||||| |||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  35069727 tgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 43317449 - 43317542
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| ||||||||||||||| || ||||  || |||||||||| |||||||||||||||| || |||| |||||    
T  43317449 tgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactctt 43317542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 27535325 - 27535219
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||||   ||||||||| |||||   ||| || |||||||||| ||||||||||||| ||||||||||||||||||    
T  27535325 tgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctttcatct 27535226  T
Q  321 catctcc 327  Q
    | |||||    
T  27535225 cctctcc 27535219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 32029908 - 32029818
Alignment:
Q  224 tacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||| ||||| ||||||||  ||||| |||||||||||||||| | || |||||||||||||||||||||| ||||||| ||||| ||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatctt 32029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 10573755 - 10573848
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| ||| |  ||||||||||||||| | || | |||||||||||||||||||||||||||| ||||| ||||    
T  10573755 tgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatctt 10573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 24001106 - 24001013
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  24001106 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 24280690 - 24280597
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||| |||||||| |||||||| |||||  ||| |||| |||||||||||   ||||||||||||||||||||||||| || ||||||||||    
T  24280690 tgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 42538525 - 42538432
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  42538525 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 45326026 - 45326119
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| ||||||||||||||| ||| | |||||||||||||||  | || |||||||||||||| |||||||||||| || ||||| ||||    
T  45326026 tgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 26898496 - 26898408
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||||||||||||||||||| |||||  ||||||||  ||||| | || |||||||||||||| ||||||| ||||||| |||||    
T  26898496 tgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacacttt 26898408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 44326184 - 44326272
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||| |||||| |||||||| ||| | ||||||||||| |||  | || |||||||||||||| ||||||||||||||| |||||    
T  44326184 tgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttt 44326272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 5015401 - 5015494
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  ||||||   ||||  ||||||||||| |||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  5015401 tgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 5811018 - 5810925
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||| |||| |||||||  ||||| |||||||||||| ||  | || |||||||||| ||| ||||||||||||||| ||||| ||||    
T  5811018 tgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 16180450 - 16180358
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||  ||||| |||||||||||||| | | ||   |||||||||||||||||||||||||||| ||||| ||||    
T  16180450 tgttacatcaacaccatttattcctacacc-cattgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatctt 16180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 43343718 - 43343625
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||| | ||||||   |||||  ||||||||||||||| | || |||||||||| ||| ||||||||||||||| ||||| ||||    
T  43343718 tgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 43343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 44417028 - 44416935
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||| | ||||||   |||||  ||||||||||||||| | || |||||||||| ||| ||||||||||||||| ||||| ||||    
T  44417028 tgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 44416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 42972858 - 42972940
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    |||||| |||||| | |||||||  ||||  ||||||||||| |||| | || |||||||||||||| |||||||||||||||    
T  42972858 tgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 42972940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 41861680 - 41861775
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcacta-ag-gatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| |||||  ||| ||||||| ||| | || || ||||||||||||| || |||||||||||| ||||| ||||    
T  41861680 tgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatctt 41861775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 9216308 - 9216389
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    ||||||||||||||| |||||||  | | |  ||||||||||| ||||| ||  ||||||||||||| |||||||||||||||    
T  9216308 tgttacatgaacaccctttattcctatatcctattgtacaccc-atgcattagagatattttggtaagttcatctcacaacca 9216389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 38160642 - 38160580
Alignment:
Q  252 cattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||| | || ||||||||| |||| ||||||||||||| | ||||| ||||    
T  38160642 cattgtacaccccatgtattagggatattttagtaacttcatctcacaactacactttatctt 38160580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 33242409 - 33242515
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33242409 tgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctttcatct 33242508  T
Q  321 catctcc 327  Q
    | |||||    
T  33242509 cctctcc 33242515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 27441548 - 27441654
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27441548 tgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 27441647  T
Q  321 catctcc 327  Q
    | |||||    
T  27441648 cctctcc 27441654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 3213406 - 3213499
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||    
T  3213406 tgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 33253919 - 33254026
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctc-tttcatc 319  Q
    ||||||||||||||| |||| |||||||||  ||||||||||||||||| || ||| || |||||||||||||||||||| |||||||| || |||||||    
T  33253919 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatcttttcatc 33254018  T
Q  320 tcatctcc 327  Q
    || |||||    
T  33254019 tcctctcc 33254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 13743315 - 13743222
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  13743315 tgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 13748815 - 13748722
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  13748815 tgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 26670103 - 26670010
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||||||||||||||| |||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  26670103 tgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 31109316 - 31109210
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| ||| | |||| |||||||||||||||| |||||||||| |||||||| || || |||| | ||||||||||||||    
T  31109316 tgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctttcatct 31109217  T
Q  321 catctcc 327  Q
    | |||||    
T  31109216 cctctcc 31109210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 7292753 - 7292846
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  7292753 tgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 21293771 - 21293678
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| |||  ||| ||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||| ||||    
T  21293771 tgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 7367555 - 7367643
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    ||||| ||||||| | |||||||| ||||||||||||||| |||||| | || |||||||||||||| ||||||||||||||| |||||    
T  7367555 tgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacacttt 7367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 7273429 - 7273336
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  |||||| ||||||||||||||| | ||  ||||||||||||| |||||||||||| || ||||| ||||    
T  7273429 tgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatctt 7273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 9698427 - 9698334
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  9698427 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 24204081 - 24203993
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    ||||||||||||||| |||||||  |||||  ||||||||| ||||| | || |||||||||||||| ||||||||||||||| |||||    
T  24204081 tgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacacttt 24203993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 26466805 - 26466898
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||  ||||| |||||||||| ||||| | || || ||||||||||| ||||||||||||||| ||||| ||||    
T  26466805 tgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 30014349 - 30014442
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||| |||| |||||| | || | |||||||||||| ||||||||||||||||||||| ||||    
T  30014349 tgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 30735988 - 30736081
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||| ||||||||  ||||| ||||||||||| |||| | ||  ||||||||||||| |||||||||||| || ||||| ||||    
T  30735988 tgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatctt 30736081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 21279935 - 21280028
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   |||   ||||| ||| |||||| | || |||||||||||||||||||||||||||||| ||||| ||||    
T  21279935 tgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 17208080 - 17208186
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    |||||| |||||||| |||| ||| |||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17208080 tgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctttcatct 17208179  T
Q  321 catctcc 327  Q
    | |||||    
T  17208180 cctctcc 17208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 32473488 - 32473382
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||| |||||||||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32473488 tgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctttcatct 32473389  T
Q  321 catctcc 327  Q
    | |||||    
T  32473388 cctctcc 32473382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 30622812 - 30622708
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||| | |||| ||| |||||  |||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30622812 tgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttcatct 30622714  T
Q  321 catctc 326  Q
    | ||||    
T  30622713 cctctc 30622708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 41334757 - 41334664
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| |||||||||| ||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  41334757 tgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 5257001 - 5257094
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| ||| | |||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  5257001 tgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 5257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 7617139 - 7617232
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||| ||||  |||| ||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  7617139 tgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 2614743 - 2614650
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  2614743 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 22512311 - 22512404
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||  |||||||||| ||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  22512311 tgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 38470585 - 38470678
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| |||   |||||||||||||||| | ||||||||||||||||||||||| |||||| || ||||| ||||    
T  38470585 tgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatctt 38470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 18033988 - 18034081
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||  |||||||||||| ||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  18033988 tgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 18034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 33801475 - 33801568
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||| | ||||||   ||||| |||||||||| ||||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  33801475 tgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 39122524 - 39122434
Alignment:
Q  223 ttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||| ||| || |||  |||||| ||| | || | |||||||||||||||||||||||||| | ||||| ||||    
T  39122524 ttacatgaacaccttttattcatacatctaattagacaccc-atgtattaggaatattttggtaaattcatctcacaactacactttatctt 39122434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 25915081 - 25915039
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccc 263  Q
    ||||||||||||||| |||||||  ||||||||||||||||||    
T  25915081 tgttacatgaacaccctttattcctacacctcattgtacaccc 25915039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 33855137 - 33855091
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatg 267  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||||||    
T  33855137 tgttacatgaacaccctttattcctacaccccattgtacaccccatg 33855091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 45813 - 45707
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45813 tgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 45714  T
Q  321 catctcc 327  Q
    | |||||    
T  45713 cctctcc 45707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 35181522 - 35181627
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||||  ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  35181522 tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttcatct 35181621  T
Q  321 catctc 326  Q
    | ||||    
T  35181622 cctctc 35181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 16603720 - 16603614
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||| ||||| |||| ||| |||||| ||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  16603720 tgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctttcatct 16603621  T
Q  321 catctcc 327  Q
    | |||||    
T  16603620 cctctcc 16603614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 34304794 - 34304899
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||| | |||| ||| |||||  ||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  34304794 tgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttcatct 34304893  T
Q  321 catctc 326  Q
    | ||||    
T  34304894 cctctc 34304899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 33630087 - 33629981
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||| ||||||| |||| ||| |||||||||||||||||| ||||| || ||| ||||| |||| ||||||||||||| ||||||||||||||||||    
T  33630087 tgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctttcatct 33629988  T
Q  321 catctcc 327  Q
    | |||||    
T  33629987 cctctcc 33629981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 42295201 - 42295294
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  |||||||||||||||| ||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  42295201 tgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 16358920 - 16358821
Alignment:
Q  228 tgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    |||| ||| |||| ||| |||||  |||||||| |||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  16358920 tgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttctttttcatctcctctcc 16358821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 10678210 - 10678140
Alignment:
Q  257 tacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    ||||||||||  | |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10678210 tacaccccatatattaaggacattttggtaaattcatctcacaaccatactttctctttcatctcctctcc 10678140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 18066812 - 18066706
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    ||||||||||||||| |||| ||| |||    |||||||| |||||| | || ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  18066812 tgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctttcatct 18066713  T
Q  321 catctcc 327  Q
    | |||||    
T  18066712 cctctcc 18066706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 29801044 - 29800951
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| ||| | |||||||||||||||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  29801044 tgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 29800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 1375550 - 1375641
Alignment:
Q  223 ttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||| |||||  ||||||||||||||  | || ||||||||||||||||| |||||||||| | ||||| ||||    
T  1375550 ttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatctt 1375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 5754909 - 5755002
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||||||||||||||  ||| | ||||||||| |||||  | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  5754909 tgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 11582772 - 11582865
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  11582772 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 29705368 - 29705461
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||||| |||||||||||||||| | || |||||||||| ||| ||||||||||||||| ||||| ||||    
T  29705368 tgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 36743577 - 36743484
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||| | |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  36743577 tgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 40528726 - 40528635
Alignment:
Q  224 tacatgaacacc-ttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||  | || ||| |||||| |||||| |||||||||||| ||||||||||    
T  40528726 tacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctctt 40528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 26125641 - 26125734
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    |||||||| |||||| |||||||| |||   |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  26125641 tgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 42197529 - 42197436
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||| ||||| |||| | ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  42197529 tgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 20148766 - 20148854
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    |||||||| |||||| |||||||| ||| | ||||||||||| |||  | || |||||||||||||| ||||||||||||||| |||||    
T  20148766 tgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttt 20148854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 42699263 - 42699351
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatacttt 309  Q
    ||||||||||||||| |||||||  ||||| |||||||||||  ||| | || ||||||||| |||| ||||||||||||||| |||||    
T  42699263 tgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacacttt 42699351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 2166055 - 2165964
Alignment:
Q  223 ttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||| |||||||  ||||| ||||||| |||||||| | ||  ||||||||||||| ||||||||| ||||| ||||| ||||    
T  2166055 ttacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 19386616 - 19386553
Alignment:
Q  264 catgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatctcatctcc 327  Q
    |||||| |||| || ||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  19386616 catgcattaagaatgttttgataaattcatctcacaactatactttctctttcatctcctctcc 19386553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 30660836 - 30660743
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||| | |||||||||||| ||| | || |||||||||||||| ||||||| ||||||| ||||| ||||    
T  30660836 tgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 30912656 - 30912575
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacc 302  Q
    ||||||||||||||| |||||||  ||||| ||||||||||  |||| | || || ||||||||||| ||||||||||||||    
T  30912656 tgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaacc 30912575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 31384672 - 31384763
Alignment:
Q  223 ttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||| |||||||  |||    ||||||||||||||| | || | |||||||||||| ||||||||||||||| ||||| ||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatctt 31384763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 45397322 - 45397404
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaacca 303  Q
    |||||| |||||||| |||||||  ||||| |||| ||||||| ||| | || ||||||||| |||| |||||||||||||||    
T  45397322 tgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaacca 45397404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 2547002 - 2547095
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||  ||||||   ||||  ||||||||||| |||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  2547002 tgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatctt 2547095  T

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Target: scaffold0100 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 35550 - 35444
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctttcatct 320  Q
    |||||||| |||||| |||| ||| |||||  ||||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||||    
T  35550 tgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctttcatct 35451  T
Q  321 catctcc 327  Q
    | |||||    
T  35450 cctctcc 35444  T

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Target: scaffold0119 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 691 - 784
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  ||||||||||||||||| |||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  691 tgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T

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Target: scaffold0385 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 11261 - 11350
Alignment:
Q  225 acatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||  |||||||| ||||| |||||||||||||||  | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  11261 acatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T

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Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 112661 - 112754
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| |||||||  |||   |||||||||||| ||| | || |||||||||||||| ||||||||||||||| ||||| ||||    
T  112661 tgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 112754  T

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Target: scaffold0187 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 14282 - 14189
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||||| ||||||||| || ||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  14282 tgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T

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Target: scaffold0187; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 24610 - 24517
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||||||||||||| ||||||   ||||| ||||||||| || ||| | || ||||||||| |||| ||||||||||||||| ||||| ||||    
T  24610 tgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 23515 - 23422
Alignment:
Q  221 tgttacatgaacaccttttattcacacacctcattgtacaccccatgcactaaggatattttggtaaattcatctcacaaccatactttctctt 314  Q
    ||||| ||||||||| |||||||  ||||  ||||||||| |||||| | ||  ||||||||||||| ||||||| |||| || ||||| ||||    
T  23515 tgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T

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