View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1456_high_21 (Length: 236)
Name: NF1456_high_21
Description: NF1456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1456_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 8270192 - 8270395
Alignment:
| Q |
16 |
atgaaggtagttaaaacgggtaggtagacactagacaagcttaaatcagggacataaaattggaagttcaaagtattggtgagggtgaggacgtgtatgt |
115 |
Q |
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| T |
8270192 |
atgaaggtagttaaaacgggtaggtagacactagacaagcttaaatcagggacataaaattggaagttcaaagtattggtgagggtgaggacgtgtatgt |
8270291 |
T |
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| Q |
116 |
gttgtgtgataagaggaattgtgtgactatgatatgagatgtcatcactcatcaatgtgaggagtaaattgtttatggaccaatgaacttcttgtcctat |
215 |
Q |
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| T |
8270292 |
gttgtgtgataagaggaattgtgtgactatgatatgagatgtcatcactcatcaatgtgaggagtaaattgtttatggaccaatgaacttcttgtcctat |
8270391 |
T |
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| Q |
216 |
tact |
219 |
Q |
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|||| |
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| T |
8270392 |
tact |
8270395 |
T |
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