View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1456_high_6 (Length: 311)
Name: NF1456_high_6
Description: NF1456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1456_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 31132949 - 31133086
Alignment:
| Q |
7 |
agagatgttagaaagggagaccacttgttcctcttttctttt-gcttagctgaggaagttcttagttattaaggtctaaacaagcttgtggagatggacc |
105 |
Q |
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| T |
31132949 |
agagatgttagaaagggagaccccttgttcctcttttctttttgcttagctgaggaagttcttagttattaaggtctaaacaagcttgtggagatggacc |
31133048 |
T |
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| Q |
106 |
agttgaagctcataagagaaaccaaatcaaatgaaatc |
143 |
Q |
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| T |
31133049 |
agttgaagctcataagagaaaccaaatcaaatgaaatc |
31133086 |
T |
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