View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1456_low_31 (Length: 231)
Name: NF1456_low_31
Description: NF1456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1456_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 14741537 - 14741319
Alignment:
| Q |
1 |
ccaacatagtattgatatggtgacccttaaccttgaagctgaggtttgtcatgttacctattgctagtaatgttgtttgctttcatttactaattttgtt |
100 |
Q |
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| T |
14741537 |
ccaacatagtattgatatggtgacccttaaccttgaagctgaggtttgtcatgttacctattgctagtaatgttgtttgctttcatttactaattttgtt |
14741438 |
T |
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| Q |
101 |
atctataaagtttcgattttgtttattttagcaagtcttgatttgatactcgctaattttttaagcgtaattttcagagcgactacacagtatggagatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
14741437 |
atctataaagtttcgattttgtttattttagcaagtcttgattagatactcactaattatttaagcgtaattttcagagcgactacacagtatggagatt |
14741338 |
T |
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| Q |
201 |
gtatatgtgtgttaaaaat |
219 |
Q |
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|||||||| |||||||||| |
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| T |
14741337 |
gtatatgtttgttaaaaat |
14741319 |
T |
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