View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1457-2-Insertion-22 (Length: 319)
Name: NF1457-2-Insertion-22
Description: NF1457-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457-2-Insertion-22 |
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Alignment Details
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 8 - 315
Target Start/End: Original strand, 1815507 - 1815814
Alignment:
| Q |
8 |
agaaaatacagcgtcatagccatagccatagcattcttccagtttccgatcaaactgaatgcacagaaaccaataaccaacaaaaccatgttgtggagtc |
107 |
Q |
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| T |
1815507 |
agaaaatacagtgtcatagccatagccatagcatttttccagtttccgatcaaactgaatgcacagaaaccaataaccaacaaaaccatgttgtggagtc |
1815606 |
T |
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| Q |
108 |
tcgccgttgctcggaacaaaaccgtccaacttttccgccacaataacttcactctcctcctccgccaccgcagcttctccaccacaggtctctacggcat |
207 |
Q |
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| T |
1815607 |
tcgccgttgctcggaacaaaaccgtccaacttttccgccacaaaaacctccctctcctcctccgccaccgcagcttctccaccacaggtctctacggcat |
1815706 |
T |
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| Q |
208 |
ccctcatttgaaatccccaaaaggattccaacctttcgtagatgaagccattcaacggtatcaaattcaatccattcttcttcctcttaacagtttctgt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1815707 |
ccctcatttgaaatccccaaaaggattccaacctttcgtagatgaagccattcaacggtatcaaattcaatccattcttcttcctcttaacagtttctgt |
1815806 |
T |
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| Q |
308 |
tctgttct |
315 |
Q |
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|||||||| |
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| T |
1815807 |
tctgttct |
1815814 |
T |
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