View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1457-2-Insertion-27 (Length: 408)

Name: NF1457-2-Insertion-27
Description: NF1457-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1457-2-Insertion-27
NF1457-2-Insertion-27
[»] chr2 (28 HSPs)
chr2 (316-406)||(27745056-27745146)
chr2 (320-391)||(24177687-24177758)
chr2 (316-391)||(29577359-29577434)
chr2 (316-379)||(30949286-30949349)
chr2 (316-383)||(23698823-23698889)
chr2 (316-383)||(36684289-36684356)
chr2 (316-383)||(41653624-41653690)
chr2 (319-375)||(20708298-20708354)
chr2 (319-375)||(32139968-32140024)
chr2 (319-375)||(25043146-25043202)
chr2 (319-375)||(25370391-25370447)
chr2 (319-375)||(29563190-29563246)
chr2 (316-383)||(23614110-23614177)
chr2 (319-375)||(25803828-25803884)
chr2 (316-375)||(28496733-28496792)
chr2 (331-364)||(25144302-25144335)
chr2 (331-364)||(25198430-25198463)
chr2 (319-383)||(21429-21492)
chr2 (316-375)||(20282059-20282117)
chr2 (316-383)||(21344501-21344566)
chr2 (333-375)||(20635674-20635715)
chr2 (334-375)||(11318227-11318267)
chr2 (319-364)||(23798460-23798505)
chr2 (334-379)||(24172008-24172052)
chr2 (321-358)||(24321807-24321844)
chr2 (321-358)||(25337197-25337233)
chr2 (331-364)||(45706219-45706252)
chr2 (334-362)||(33181691-33181719)
[»] chr1 (21 HSPs)
chr1 (316-406)||(19880098-19880188)
chr1 (316-406)||(19875141-19875230)
chr1 (319-391)||(52755361-52755434)
chr1 (319-379)||(41461724-41461784)
chr1 (321-388)||(25726957-25727024)
chr1 (321-388)||(25735365-25735432)
chr1 (319-375)||(19364674-19364730)
chr1 (319-375)||(22411107-22411163)
chr1 (319-375)||(36850391-36850447)
chr1 (319-375)||(49379680-49379736)
chr1 (321-375)||(19788317-19788371)
chr1 (319-375)||(46143577-46143633)
chr1 (319-364)||(8653751-8653796)
chr1 (331-364)||(4028316-4028349)
chr1 (331-364)||(22660102-22660135)
chr1 (331-379)||(8953524-8953571)
chr1 (316-358)||(20412272-20412313)
chr1 (335-364)||(16365346-16365375)
chr1 (334-375)||(18816371-18816411)
chr1 (331-364)||(27911366-27911399)
chr1 (316-375)||(48256319-48256376)
[»] scaffold1092 (1 HSPs)
scaffold1092 (319-408)||(1682-1771)
[»] scaffold1058 (1 HSPs)
scaffold1058 (333-408)||(3059-3134)
[»] chr8 (29 HSPs)
chr8 (316-391)||(21139672-21139746)
chr8 (316-375)||(22284971-22285030)
chr8 (319-389)||(23455580-23455650)
chr8 (319-364)||(29003631-29003676)
chr8 (319-375)||(6570573-6570629)
chr8 (319-375)||(17126820-17126876)
chr8 (316-363)||(42418560-42418607)
chr8 (319-379)||(22818236-22818296)
chr8 (319-375)||(24034667-24034723)
chr8 (319-375)||(43836313-43836369)
chr8 (319-364)||(18230692-18230737)
chr8 (331-364)||(18264437-18264470)
chr8 (331-364)||(18273450-18273483)
chr8 (331-364)||(18399284-18399317)
chr8 (331-364)||(20393330-20393363)
chr8 (331-364)||(23779440-23779473)
chr8 (331-364)||(23879828-23879861)
chr8 (316-375)||(26012987-26013045)
chr8 (334-408)||(17504191-17504263)
chr8 (321-387)||(26854081-26854146)
chr8 (334-364)||(45466706-45466736)
chr8 (331-364)||(13365650-13365683)
chr8 (334-375)||(14821201-14821241)
chr8 (331-364)||(22854027-22854060)
chr8 (331-364)||(33632445-33632478)
chr8 (334-375)||(37652824-37652864)
chr8 (334-379)||(38349947-38349991)
chr8 (334-362)||(1302344-1302372)
chr8 (319-375)||(25396945-25397000)
[»] chr7 (30 HSPs)
chr7 (316-391)||(1613976-1614051)
chr7 (319-390)||(4090707-4090778)
chr7 (316-383)||(39271160-39271227)
chr7 (319-379)||(48801275-48801335)
chr7 (321-383)||(2325860-2325922)
chr7 (319-375)||(3210763-3210819)
chr7 (319-375)||(37100400-37100456)
chr7 (322-375)||(11997371-11997424)
chr7 (323-375)||(12199172-12199224)
chr7 (319-374)||(9258667-9258722)
chr7 (319-374)||(9311531-9311586)
chr7 (316-383)||(16897281-16897347)
chr7 (321-363)||(368115-368157)
chr7 (316-375)||(17206420-17206478)
chr7 (331-364)||(13411286-13411319)
chr7 (331-364)||(15206117-15206150)
chr7 (331-364)||(21506988-21507021)
chr7 (334-364)||(20109029-20109059)
chr7 (334-364)||(23293747-23293777)
chr7 (334-364)||(30257363-30257393)
chr7 (331-364)||(4294608-4294641)
chr7 (331-364)||(4790936-4790969)
chr7 (331-364)||(5397735-5397768)
chr7 (321-358)||(11483906-11483942)
chr7 (334-375)||(22578641-22578681)
chr7 (334-375)||(38388188-38388228)
chr7 (331-364)||(45407841-45407874)
chr7 (331-379)||(538286-538333)
chr7 (331-375)||(14551685-14551728)
chr7 (319-375)||(41722713-41722768)
[»] chr6 (43 HSPs)
chr6 (316-391)||(8603504-8603578)
chr6 (316-391)||(22601361-22601436)
chr6 (319-408)||(25775036-25775124)
chr6 (316-383)||(24545627-24545693)
chr6 (319-383)||(19615216-19615280)
chr6 (319-375)||(20105661-20105717)
chr6 (319-375)||(22737836-22737892)
chr6 (316-375)||(19993601-19993659)
chr6 (316-375)||(25339270-25339328)
chr6 (316-375)||(25923410-25923468)
chr6 (321-375)||(5672110-5672164)
chr6 (321-383)||(20993794-20993856)
chr6 (331-408)||(18732353-18732429)
chr6 (316-383)||(29360322-29360386)
chr6 (331-379)||(18006330-18006377)
chr6 (319-379)||(26473949-26474009)
chr6 (319-375)||(30671316-30671372)
chr6 (331-364)||(12993335-12993368)
chr6 (316-361)||(18627434-18627478)
chr6 (331-364)||(19560951-19560984)
chr6 (331-364)||(21573924-21573957)
chr6 (331-364)||(25606946-25606979)
chr6 (331-364)||(25615284-25615317)
chr6 (331-364)||(25626330-25626363)
chr6 (316-356)||(20218507-20218546)
chr6 (316-356)||(22112532-22112571)
chr6 (319-375)||(25786397-25786453)
chr6 (316-375)||(18233836-18233894)
chr6 (319-358)||(18993203-18993241)
chr6 (316-375)||(25949332-25949390)
chr6 (334-364)||(17119508-17119538)
chr6 (337-379)||(19563870-19563911)
chr6 (334-408)||(19966651-19966723)
chr6 (316-358)||(25963932-25963973)
chr6 (316-358)||(25968579-25968620)
chr6 (331-364)||(11215609-11215642)
chr6 (331-364)||(14077389-14077422)
chr6 (331-364)||(15153690-15153723)
chr6 (331-364)||(23297460-23297493)
chr6 (322-387)||(29253995-29254058)
chr6 (319-375)||(17743525-17743580)
chr6 (321-357)||(18396545-18396580)
chr6 (331-379)||(23603325-23603372)
[»] chr4 (18 HSPs)
chr4 (316-391)||(16953919-16953994)
chr4 (319-406)||(9857205-9857292)
chr4 (319-375)||(39770-39826)
chr4 (319-379)||(7197220-7197280)
chr4 (319-375)||(8091934-8091990)
chr4 (319-375)||(39043524-39043580)
chr4 (316-375)||(12808216-12808275)
chr4 (319-375)||(9944937-9944993)
chr4 (331-375)||(48641695-48641739)
chr4 (331-364)||(16217875-16217908)
chr4 (316-358)||(11902657-11902698)
chr4 (334-364)||(25146256-25146286)
chr4 (331-364)||(7897560-7897593)
chr4 (334-379)||(15866149-15866193)
chr4 (334-375)||(17996148-17996188)
chr4 (331-364)||(40563874-40563907)
chr4 (319-375)||(11888995-11889050)
chr4 (331-379)||(18242205-18242252)
[»] chr5 (32 HSPs)
chr5 (319-391)||(21382284-21382356)
chr5 (316-391)||(34223130-34223206)
chr5 (318-391)||(21389676-21389749)
chr5 (316-391)||(20724860-20724934)
chr5 (320-388)||(12322338-12322406)
chr5 (319-379)||(20245554-20245614)
chr5 (319-375)||(23756753-23756809)
chr5 (319-375)||(23822209-23822265)
chr5 (316-387)||(31758133-31758204)
chr5 (319-375)||(23435322-23435378)
chr5 (319-375)||(23446689-23446745)
chr5 (321-387)||(20738363-20738428)
chr5 (331-379)||(23267701-23267748)
chr5 (321-364)||(2953570-2953612)
chr5 (316-379)||(12410533-12410595)
chr5 (316-359)||(31414623-31414665)
chr5 (331-364)||(6406290-6406323)
chr5 (331-364)||(9728947-9728980)
chr5 (331-364)||(25741696-25741729)
chr5 (331-364)||(29053069-29053102)
chr5 (331-364)||(33701503-33701536)
chr5 (334-364)||(5078253-5078283)
chr5 (316-358)||(22942365-22942406)
chr5 (334-408)||(26745113-26745185)
chr5 (331-364)||(3388035-3388068)
chr5 (331-364)||(18483747-18483780)
chr5 (331-364)||(21401020-21401053)
chr5 (331-364)||(21734653-21734686)
chr5 (331-364)||(22856169-22856202)
chr5 (334-375)||(35307676-35307716)
chr5 (331-364)||(42789871-42789904)
chr5 (331-379)||(20449853-20449900)
[»] chr3 (34 HSPs)
chr3 (323-406)||(3279839-3279921)
chr3 (319-375)||(1993450-1993506)
chr3 (319-375)||(1998609-1998665)
chr3 (319-383)||(14137751-14137815)
chr3 (316-392)||(14348087-14348163)
chr3 (319-379)||(21265111-21265171)
chr3 (318-375)||(17480468-17480525)
chr3 (319-375)||(3212540-3212596)
chr3 (319-375)||(5687680-5687736)
chr3 (319-375)||(17388476-17388532)
chr3 (316-375)||(13418392-13418450)
chr3 (316-375)||(19567030-19567089)
chr3 (319-375)||(2005952-2006008)
chr3 (319-375)||(5666536-5666592)
chr3 (316-375)||(7908528-7908586)
chr3 (316-383)||(17209653-17209719)
chr3 (316-383)||(27407216-27407282)
chr3 (316-361)||(11827451-11827495)
chr3 (322-375)||(20225254-20225306)
chr3 (331-375)||(20156062-20156105)
chr3 (316-375)||(10850753-10850812)
chr3 (331-364)||(2099-2132)
chr3 (331-364)||(13325827-13325860)
chr3 (331-364)||(13665117-13665150)
chr3 (331-364)||(50908938-50908971)
chr3 (319-375)||(14071749-14071805)
chr3 (333-375)||(14457329-14457370)
chr3 (334-364)||(53160585-53160615)
chr3 (334-375)||(13052348-13052388)
chr3 (331-364)||(13691248-13691281)
chr3 (334-375)||(14445282-14445322)
chr3 (331-364)||(20154977-20155010)
chr3 (328-364)||(15425204-15425240)
chr3 (331-379)||(37978339-37978386)
[»] scaffold0231 (1 HSPs)
scaffold0231 (321-390)||(21333-21401)
[»] scaffold0014 (2 HSPs)
scaffold0014 (319-379)||(191178-191238)
scaffold0014 (151-202)||(26205-26256)
[»] scaffold0059 (1 HSPs)
scaffold0059 (318-375)||(13048-13105)
[»] scaffold0097 (1 HSPs)
scaffold0097 (319-375)||(12372-12428)
[»] scaffold0049 (1 HSPs)
scaffold0049 (319-375)||(14648-14704)
[»] scaffold0013 (1 HSPs)
scaffold0013 (319-375)||(232293-232349)
[»] scaffold0773 (1 HSPs)
scaffold0773 (316-383)||(1114-1181)
[»] scaffold0278 (1 HSPs)
scaffold0278 (319-375)||(12576-12632)
[»] scaffold0228 (1 HSPs)
scaffold0228 (319-375)||(19675-19731)
[»] scaffold0009 (3 HSPs)
scaffold0009 (318-379)||(150890-150950)
scaffold0009 (331-364)||(153918-153951)
scaffold0009 (334-364)||(245855-245885)
[»] scaffold0375 (1 HSPs)
scaffold0375 (331-379)||(13237-13284)
[»] scaffold0192 (1 HSPs)
scaffold0192 (331-379)||(4539-4586)
[»] scaffold0016 (1 HSPs)
scaffold0016 (319-364)||(169398-169441)
[»] scaffold0011 (2 HSPs)
scaffold0011 (316-358)||(172743-172784)
scaffold0011 (331-364)||(162489-162522)
[»] scaffold0506 (2 HSPs)
scaffold0506 (331-364)||(1844-1877)
scaffold0506 (331-364)||(9660-9693)
[»] scaffold0452 (1 HSPs)
scaffold0452 (331-364)||(3858-3891)
[»] scaffold0291 (1 HSPs)
scaffold0291 (331-364)||(949-982)
[»] scaffold0111 (1 HSPs)
scaffold0111 (331-364)||(35081-35114)
[»] scaffold0076 (1 HSPs)
scaffold0076 (331-364)||(23162-23195)
[»] scaffold0022 (1 HSPs)
scaffold0022 (331-364)||(110567-110600)
[»] scaffold0020 (1 HSPs)
scaffold0020 (331-364)||(121566-121599)
[»] scaffold0004 (1 HSPs)
scaffold0004 (331-364)||(24357-24390)
[»] scaffold0084 (1 HSPs)
scaffold0084 (316-387)||(31659-31729)
[»] scaffold0170 (1 HSPs)
scaffold0170 (334-364)||(6529-6559)
[»] scaffold0001 (1 HSPs)
scaffold0001 (316-358)||(520755-520796)
[»] scaffold0861 (1 HSPs)
scaffold0861 (334-375)||(1406-1446)
[»] scaffold0674 (1 HSPs)
scaffold0674 (334-375)||(1824-1864)
[»] scaffold0630 (1 HSPs)
scaffold0630 (334-375)||(5452-5492)
[»] scaffold0512 (1 HSPs)
scaffold0512 (331-364)||(5737-5770)
[»] scaffold0317 (1 HSPs)
scaffold0317 (331-364)||(14225-14258)
[»] scaffold0258 (1 HSPs)
scaffold0258 (334-375)||(21701-21741)
[»] scaffold0115 (1 HSPs)
scaffold0115 (331-360)||(17869-17898)
[»] scaffold0072 (1 HSPs)
scaffold0072 (331-364)||(60890-60923)
[»] scaffold0042 (2 HSPs)
scaffold0042 (331-364)||(56732-56765)
scaffold0042 (331-364)||(72212-72245)
[»] scaffold0037 (1 HSPs)
scaffold0037 (334-375)||(84276-84316)
[»] scaffold0032 (1 HSPs)
scaffold0032 (331-364)||(117791-117824)
[»] scaffold0261 (1 HSPs)
scaffold0261 (331-375)||(4858-4901)
[»] scaffold0071 (1 HSPs)
scaffold0071 (328-364)||(36998-37034)
[»] scaffold0031 (1 HSPs)
scaffold0031 (319-375)||(23275-23330)
[»] scaffold0029 (2 HSPs)
scaffold0029 (331-375)||(117772-117815)
scaffold0029 (331-375)||(124016-124059)


Alignment Details
Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 406
Target Start/End: Original strand, 27745056 - 27745146
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttattt 406  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||| |||||||||    
T  27745056 acaattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttctttatttccttgttattt 27745146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 24177758 - 24177687
Alignment:
Q  320 ttcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  24177758 ttcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttcttt 24177687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 29577434 - 29577359
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  29577434 acaattcattttttgttcttggaattcaatcagtgacaattgtctttcttaataaaagttatttctttatttcttt 29577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 30949349 - 30949286
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  30949349 acaattcatcttttgttcttcgaattcaataagtgacaattgtctttctaaataaaagttattt 30949286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 23698889 - 23698823
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||    
T  23698889 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagttctttcttt 23698823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 36684289 - 36684356
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  36684289 acaaatcatcttttcttcttggaattcaataagtgacaattgtctttcttaataaaagttctttcttt 36684356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 41653690 - 41653624
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||    
T  41653690 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagttctttcttt 41653624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 20708354 - 20708298
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  20708354 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 20708298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 32139968 - 32140024
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  32139968 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 32140024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 25043202 - 25043146
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||  |||||||||    
T  25043202 attcatcttttattcttggaatttaataagtgacaattgtctttcttaataaaagtt 25043146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 25370447 - 25370391
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||    
T  25370447 attcatcttttattcttgaaattcaataagtgacaattgtctttcttaataaaagtt 25370391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 29563190 - 29563246
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  29563190 attcatctttcattcttggaattcaataagtgacaattgtctttcttaataaaagtt 29563246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 23614177 - 23614110
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||| ||||||||||| ||||||||||| || |||||||||  ||||||||| |||||||    
T  23614177 acaattcatcttctgttcttggaaatcaataagtgaaaactgtctttcttaataaaagttctttcttt 23614110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 25803884 - 25803828
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||  |||||||||    
T  25803884 attcatctttcattcttggaatttaataagtgacaattgtctttcttaataaaagtt 25803828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 28496792 - 28496733
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||  |||||||||||||||||  |||||||||||||||  |||||||||    
T  28496792 acaattcatctttgattcttggaattcaataatagacaattgtctttcttaataaaagtt 28496733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 25144335 - 25144302
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  25144335 ttcttggaattcaataagtgacaattgtctttct 25144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 25198430 - 25198463
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  25198430 ttcttggaattcaataagtgacaattgtctttct 25198463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 21492 - 21429
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||||||||||||||| ||| |||||||||||||||  |  ||||||||| |||||||    
T  21492 attcatcttttgttcttggaattaaat-agtgacaattgtcttctttaataaaagttctttcttt 21429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 20282059 - 20282117
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  20282059 acaattcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 20282117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 21344566 - 21344501
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||||||||| |||||||| ||| |||||||||||| |||||  || ||||||||||||||    
T  21344566 acaattcatcttttgttattggaattaaat-agtgacaattgt-tttctttattaaagttatttcttt 21344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 20635674 - 20635715
Alignment:
Q  333 cttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  20635674 cttggaattcaataagtgacaattgtcttt-tgaataaaagtt 20635715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 11318267 - 11318227
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  11318267 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 11318227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 23798505 - 23798460
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||  ||||||||||||||||| |||||||| |||||||    
T  23798505 attcatctttcattcttggaattcaataaatgacaattttctttct 23798460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 24172008 - 24172052
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||||||||||||| |||||||| || |||||||||||||    
T  24172008 ttggaattcaataagtgacagttgtcttt-tgaataaaagttattt 24172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 24321807 - 24321844
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  24321807 tcatcttttgttcttggaaattaataagtgacaattgt 24321844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 25337233 - 25337197
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  25337233 tcatcttttgttcttggaattcaat-agtgacaattgt 25337197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 45706219 - 45706252
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||| ||||||||||||    
T  45706219 ttcttggaattcaataagtgataattgtctttct 45706252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 33181691 - 33181719
Alignment:
Q  334 ttggaattcaataagtgacaattgtcttt 362  Q
    |||||||||||||||||||||||||||||    
T  33181691 ttggaattcaataagtgacaattgtcttt 33181719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 406
Target Start/End: Complemental strand, 19880188 - 19880098
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttattt 406  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||||| ||| |||||||||    
T  19880188 acaattcatcttttgttcttggaattcaataagtgacaattctctttcttaataaaagttctttctttatttctttatttccttgttattt 19880098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 316 - 406
Target Start/End: Complemental strand, 19875230 - 19875141
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttattt 406  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||| |||||||||    
T  19875230 acaattcatttttt-ttcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttctttatttccttgttattt 19875141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 52755434 - 52755361
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtc-tttctggataaaagttatttctttatttcttt 391  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||| |||||||||||||||    
T  52755434 attcatcttttgttcttggaattcaataagtgacaattgtcttttcttaataaaggttctttctttatttcttt 52755361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 41461724 - 41461784
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  41461724 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttattt 41461784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 25726957 - 25727024
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttc 388  Q
    |||| |||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  25726957 tcattttttattcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttc 25727024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 25735365 - 25735432
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttc 388  Q
    |||| |||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  25735365 tcattttttattcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttc 25735432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 19364674 - 19364730
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  19364674 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 19364730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 22411107 - 22411163
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  22411107 attcatcttttgttcttggaattcaataagagacaattgtctttcttaataaaagtt 22411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 36850447 - 36850391
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  36850447 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 36850391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 49379736 - 49379680
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  49379736 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 49379680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 19788371 - 19788317
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  19788371 tcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 19788317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 46143633 - 46143577
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  46143633 attcattttttattcttggaattcaataagtgacaattgtctttctcaataaaagtt 46143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 8653751 - 8653796
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  8653751 attcatcttttattcttggaattcaacaagtgacaattgtctttct 8653796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 4028316 - 4028349
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  4028316 ttcttggaattcaataagtgacaattgtctttct 4028349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 22660135 - 22660102
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  22660135 ttcttggaattcaataagtgacaattgtctttct 22660102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 8953571 - 8953524
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||    
T  8953571 ttcttggaattcaataagtgacaattatctttct-aataaaagttattt 8953524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 20412272 - 20412313
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  20412272 acaattcatcttttgttcttggaaat-aataagtgacaattgt 20412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 364
Target Start/End: Complemental strand, 16365375 - 16365346
Alignment:
Q  335 tggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||    
T  16365375 tggaattcaataagtgacaattgtctttct 16365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 18816371 - 18816411
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  18816371 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 18816411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 27911399 - 27911366
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  27911399 ttcttggaattcaatatgtgacaattgtctttct 27911366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 48256319 - 48256376
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||  ||||||| |||||||| | | || |||||||||    
T  48256319 acaattcatcttttgttcttggaat--aataagtaacaattgtttctttgaataaaagtt 48256376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 319 - 408
Target Start/End: Complemental strand, 1771 - 1682
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||    
T  1771 attcgtcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttctttatttctttgttatttac 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 3134 - 3059
Alignment:
Q  333 cttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||    
T  3134 cttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttctttatttctttgttatttac 3059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 21139672 - 21139746
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  21139672 acaattcatcttttgttcttggaattcaata-gtgacaattgtctttcttaataaaagttatttctttatttcttt 21139746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 22284971 - 22285030
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  22284971 acaattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 22285030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 23455580 - 23455650
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttct 389  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||  ||||||||| |||||||||||||    
T  23455580 attcatcttttattcttggaattcaataagtgacaattctttttcttaataaaagttctttctttatttct 23455650  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 29003631 - 29003676
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29003631 attcatcttttgttcttggaattcaataagtgacaattgtctttct 29003676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 6570629 - 6570573
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  6570629 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 6570573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 17126820 - 17126876
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  17126820 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 17126876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 42418607 - 42418560
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttc 363  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  42418607 acaattcatcttttattcttggaattcaataagtgacaattgtctttc 42418560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 22818236 - 22818296
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  22818236 attcattttttattcttggaattcaataagtgacaattgtctttcttaataatagttattt 22818296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 24034667 - 24034723
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||    
T  24034667 attcatcttttattctttgaattcaataagtgacaattgtctttcttaataaaagtt 24034723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 43836369 - 43836313
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| || |||||||||||||||||||||||||||||||  |||||||||    
T  43836369 attcatcttttattattggaattcaataagtgacaattgtctttcttaataaaagtt 43836313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 18230737 - 18230692
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||| || | |||||||||||||||||||||||||||||    
T  18230737 attcatcttttattataggaattcaataagtgacaattgtctttct 18230692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 18264470 - 18264437
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  18264470 ttcttggaattcaataagtgacaattgtctttct 18264437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 18273483 - 18273450
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  18273483 ttcttggaattcaataagtgacaattgtctttct 18273450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 18399284 - 18399317
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  18399284 ttcttggaattcaataagtgacaattgtctttct 18399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 20393330 - 20393363
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  20393330 ttcttggaattcaataagtgacaattgtctttct 20393363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 23779440 - 23779473
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  23779440 ttcttggaattcaataagtgacaattgtctttct 23779473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 23879828 - 23879861
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  23879828 ttcttggaattcaataagtgacaattgtctttct 23879861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 26012987 - 26013045
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  26012987 acaattcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 26013045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 17504263 - 17504191
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||| | | |||||||| ||  |||||||||||    
T  17504263 ttggaattcaataagtgacaattgtcttt-tgaataaaagttcttt-tctttttctttactttcttgttatttac 17504191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 26854081 - 26854146
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttattt 387  Q
    ||||||||||||||||||||||||| |||||||||||| ||  |  ||||||||| ||| |||||||    
T  26854081 tcatcttttgttcttggaattcaat-agtgacaattgttttctttaataaaagttctttttttattt 26854146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 45466706 - 45466736
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  45466706 ttggaattcaataagtgacaattgtctttct 45466736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 13365683 - 13365650
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||| |||||||||||||||||||||||||||||    
T  13365683 ttctgggaattcaataagtgacaattgtctttct 13365650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 14821201 - 14821241
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  14821201 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 14821241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 22854027 - 22854060
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  22854027 ttcttggaattcaatatgtgacaattgtctttct 22854060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 33632445 - 33632478
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  33632445 ttcttggaattcaatatgtgacaattgtctttct 33632478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 37652824 - 37652864
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  37652824 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 37652864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 38349991 - 38349947
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||    
T  38349991 ttggaattcaataagtggcaattgtctttct-aataaaagttattt 38349947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 1302372 - 1302344
Alignment:
Q  334 ttggaattcaataagtgacaattgtcttt 362  Q
    |||||||||||||||||||||||||||||    
T  1302372 ttggaattcaataagtgacaattgtcttt 1302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 25396945 - 25397000
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  25396945 attcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 25397000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 1613976 - 1614051
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  1613976 acaaatcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttcttt 1614051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 390
Target Start/End: Original strand, 4090707 - 4090778
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctt 390  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  4090707 attcatctattgttcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttctt 4090778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 39271160 - 39271227
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  39271160 acaattgatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttctttcttt 39271227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 48801335 - 48801275
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  48801335 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttattt 48801275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 2325922 - 2325860
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||||    
T  2325922 tcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaaattctttcttt 2325860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 3210819 - 3210763
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  3210819 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 3210763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 37100456 - 37100400
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  37100456 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 37100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 375
Target Start/End: Complemental strand, 11997424 - 11997371
Alignment:
Q  322 catcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  11997424 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 11997371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 12199172 - 12199224
Alignment:
Q  323 atcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  12199172 atcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 12199224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 374
Target Start/End: Complemental strand, 9258722 - 9258667
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagt 374  Q
    ||||||||||| || |||||||||||||||||||||||||||||||  ||||||||    
T  9258722 attcatcttttatttttggaattcaataagtgacaattgtctttcttaataaaagt 9258667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 9311531 - 9311586
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagt 374  Q
    ||||||||||| || |||||||||||||||||||||||||||||||  ||||||||    
T  9311531 attcatcttttatttttggaattcaataagtgacaattgtctttcttaataaaagt 9311586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 16897347 - 16897281
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  |  ||||||||| |||||||    
T  16897347 acaattcatcttttgttcttggaattcaat-agtgacaattgtcttctttaataaaagttctttcttt 16897281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 368115 - 368157
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttc 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  368115 tcatcttttgttcttggaatacaataagtgacaattgtctttc 368157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 17206478 - 17206420
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||| | |||||||||||||||||| | || |||||||||    
T  17206478 acaattcatcttttgttcttggaaat-aataagtgacaattgtctctttgaataaaagtt 17206420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 13411286 - 13411319
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  13411286 ttcttggaattcaataagtgacaattgtctttct 13411319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 15206150 - 15206117
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  15206150 ttcttggaattcaataagtgacaattgtctttct 15206117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 21506988 - 21507021
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  21506988 ttcttggaattcaataagtgacaattgtctttct 21507021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 20109029 - 20109059
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  20109029 ttggaattcaataagtgacaattgtctttct 20109059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 23293777 - 23293747
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  23293777 ttggaattcaataagtgacaattgtctttct 23293747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 30257363 - 30257393
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  30257363 ttggaattcaataagtgacaattgtctttct 30257393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 4294608 - 4294641
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||| |||||||||||||||||||||||||||    
T  4294608 ttcttgaaattcaataagtgacaattgtctttct 4294641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 4790969 - 4790936
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||| |||||    
T  4790969 ttcttggaattcaataagtgacaattgtttttct 4790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 5397735 - 5397768
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  5397735 ttcttggaattcaatatgtgacaattgtctttct 5397768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 11483942 - 11483906
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  11483942 tcatcttttgttcttggaattcaataa-tgacaattgt 11483906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 22578641 - 22578681
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  22578641 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 22578681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 38388228 - 38388188
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  38388228 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 38388188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 45407874 - 45407841
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  45407874 ttcttggaattcaatatgtgacaattgtctttct 45407841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 538333 - 538286
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  538333 ttcttggaatgcaatatgtgacaattgtctttct-aataaaagttattt 538286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 14551685 - 14551728
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||    
T  14551685 ttcttggaatacaatatgtgacaattgtctttct-gataaaagtt 14551728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 41722713 - 41722768
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  41722713 attcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 41722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 8603504 - 8603578
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  8603504 acaattcatcttttgttcttggaattcaataagtgacaattgtctttct-aataaaagttctttctttatttcttt 8603578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 22601436 - 22601361
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||| |||||||||||||||    
T  22601436 acaattcatcttttgttcttgggattcaaaaagtgacaattgtctttcttaataaaagttctttctttatttcttt 22601361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 25775036 - 25775124
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| | | |||||||| ||  |||||||||||    
T  25775036 attcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttcttt-tctttttctttattttcttgttatttac 25775124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 24545693 - 24545627
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||    
T  24545693 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagttctttcttt 24545627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 19615280 - 19615216
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||  |||||||||||||||||    
T  19615280 attcatcttttattcttggaattcaagaagtgacaaatgtctttcttaataaaagttatttcttt 19615216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 20105717 - 20105661
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  20105717 attcatcttttgttcttggaattcaataagtgacaattgtcttacttaataaaagtt 20105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 22737836 - 22737892
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  22737836 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 22737892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 19993601 - 19993659
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  19993601 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttcataaaagtt 19993659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 25339328 - 25339270
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  25339328 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagtt 25339270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 25923468 - 25923410
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  25923468 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagtt 25923410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 5672164 - 5672110
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  5672164 tcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 5672110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 20993856 - 20993794
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||| | |||||||||||||||||||||||| |||||||||  ||||||||| |||||||    
T  20993856 tcatcttgtattcttggaattcaataagtgacaactgtctttcttaataaaagttttttcttt 20993794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 18732353 - 18732429
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| || ||||| ||  |||||||||||    
T  18732353 ttcttggaattcaataagtgacaattgtctttct-aataaaagttcttttttttttcctttactttcttgttatttac 18732429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 29360322 - 29360386
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||  ||||||||| |||||||    
T  29360322 acaattcatcttttgttcttggaattcaataa---tcaattgtctttcttaataaaagttctttcttt 29360386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 18006330 - 18006377
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  18006330 ttcttggaattcaataagtgacaattgtctttct-aataaaagttattt 18006377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 26473949 - 26474009
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |  || ||||||||||    
T  26473949 attcatcttttatttttggaattcaataagtgacaattgtcttttttaattaaagttattt 26474009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 30671372 - 30671316
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||  | |||||||||||||||||||||||||||||||  |||||||||    
T  30671372 attcatcttttaattttggaattcaataagtgacaattgtctttcttaataaaagtt 30671316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 12993368 - 12993335
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  12993368 ttcttggaattcaataagtgacaattgtctttct 12993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 18627434 - 18627478
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctt 361  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||    
T  18627434 acaattcatcttttgttattggaattcaat-agtgacaattgtctt 18627478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 19560984 - 19560951
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  19560984 ttcttggaattcaataagtgacaattgtctttct 19560951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 21573957 - 21573924
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  21573957 ttcttggaattcaataagtgacaattgtctttct 21573924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 25606946 - 25606979
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  25606946 ttcttggaattcaataagtgacaattgtctttct 25606979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 25615284 - 25615317
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  25615284 ttcttggaattcaataagtgacaattgtctttct 25615317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 25626330 - 25626363
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  25626330 ttcttggaattcaataagtgacaattgtctttct 25626363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 20218546 - 20218507
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaatt 356  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  20218546 acaattcatcttttgttcttggaattcaat-agtgacaatt 20218507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 22112571 - 22112532
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaatt 356  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  22112571 acaattcatcttttgttcttggaattcaat-agtgacaatt 22112532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 25786453 - 25786397
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||| |||| |||||||||| ||||||||||||||| |||||||  |||||||||    
T  25786453 attcatattttattcttggaatccaataagtgacaattctctttcttaataaaagtt 25786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 18233894 - 18233836
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  18233894 acaattcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 18233836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 358
Target Start/End: Original strand, 18993203 - 18993241
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  18993203 attcatcttttgttcttggaattcaat-agtgacaattgt 18993241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 25949332 - 25949390
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  25949332 acaattcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 25949390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 17119508 - 17119538
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  17119508 ttggaattcaataagtgacaattgtctttct 17119538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 19563911 - 19563870
Alignment:
Q  337 gaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  19563911 gaattcaataagtgacaattgtctttct-aataaaagttattt 19563870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 19966723 - 19966651
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||| | | |||||||| ||  |||||||||||    
T  19966723 ttggaattcaataagtgacaattgtcttt-tgaataaaagttcttt-tctttttctttactttgttgttatttac 19966651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 25963932 - 25963973
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  25963932 acaattcatcttttgttcttggaaat-aataagtgacaattgt 25963973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 25968579 - 25968620
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  25968579 acaattcatcttttgttcttggaaat-aataagtgacaattgt 25968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 11215609 - 11215642
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||| |||||    
T  11215609 ttcttggaattcaataagtgacaattgtttttct 11215642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 14077422 - 14077389
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  14077422 ttcttggaattcaatatgtgacaattgtctttct 14077389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 15153690 - 15153723
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||| ||||||    
T  15153690 ttcttggaattcaataagtgacaattgcctttct 15153723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 23297493 - 23297460
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  23297493 ttcttggaattcaatatgtgacaattgtctttct 23297460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 29253995 - 29254058
Alignment:
Q  322 catcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttattt 387  Q
    |||||||||||||| ||||||||| |||||||||||| |||||  ||||||||| || ||||||||    
T  29253995 catcttttgttcttagaattcaat-agtgacaattgt-tttcttaataaaagttcttcctttattt 29254058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 17743525 - 17743580
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  17743525 attcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 17743580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 18396580 - 18396545
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattg 357  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18396580 tcatcttttgttcttggaattcaat-agtgacaattg 18396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 23603372 - 23603325
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||| |||||||||| |||||||||||||||||  |||||||||||||    
T  23603372 ttcttcgaattcaatatgtgacaattgtctttct-aataaaagttattt 23603325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 16953994 - 16953919
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  16953994 acaattcatcttttgttattggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttcttt 16953919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 406
Target Start/End: Original strand, 9857205 - 9857292
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttattt 406  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||  || |||||| |||||||||||||||| ||| |||||||||    
T  9857205 attcatcttttattctcggaattcaataagtgacaattgtctttcttaattaaagttctttctttatttctttatttccttgttattt 9857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 39826 - 39770
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  39826 attcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagtt 39770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 7197220 - 7197280
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7197220 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttattt 7197280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 8091990 - 8091934
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  8091990 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 8091934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 39043580 - 39043524
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  39043580 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 39043524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 12808275 - 12808216
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  12808275 acaaatcatcttttgttcttggaattcaataagtgagaattgtctttctcaataaaagtt 12808216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 9944937 - 9944993
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||  |||||||||    
T  9944937 attcatcttttattcttggaattcaataagtgacaattttcattcttaataaaagtt 9944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 48641695 - 48641739
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  48641695 ttcttggaattcaataagtgacaattgtctttcttaataaaagtt 48641739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 16217908 - 16217875
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  16217908 ttcttggaattcaataagtgacaattgtctttct 16217875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 11902698 - 11902657
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  11902698 acaattcatcttttgttcttggaaat-aataagtgacaattgt 11902657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 25146256 - 25146286
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  25146256 ttggaattcaataagtgacaattgtctttct 25146286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 7897593 - 7897560
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  7897593 ttcttggaattcaatatgtgacaattgtctttct 7897560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 15866149 - 15866193
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||    
T  15866149 ttggaattcaataagtgacaattgtcttt-tgaataaaatttattt 15866193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 17996148 - 17996188
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  17996148 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 17996188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 40563907 - 40563874
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  40563907 ttcttggaattcaatatgtgacaattgtctttct 40563874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 11889050 - 11888995
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  11889050 attcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 11888995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 18242205 - 18242252
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  18242205 ttcttgaaattcaataagtgacaattatctttct-aataaaagttattt 18242252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 21382284 - 21382356
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  21382284 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttcttt 21382356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 34223206 - 34223130
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggat-aaaagttatttctttatttcttt 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||    
T  34223206 acaattcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaaagttatttctttattccttt 34223130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 21389676 - 21389749
Alignment:
Q  318 aattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  21389676 aattcatcttttattctttgaattcaataactgacaattgtctttcttaataaaagttatttctttatttcttt 21389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 20724934 - 20724860
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttt 391  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||    
T  20724934 acaattaatcttttgttcttggaattcaata-gtgacaattgtctttcttaataaaagttctttctttatttcttt 20724860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 12322338 - 12322406
Alignment:
Q  320 ttcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttc 388  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  12322338 ttcatcttttattcttagaattcaataagtgacaattgtctttcttaataaaagttctttctttatttc 12322406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 20245554 - 20245614
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  20245554 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaaattattt 20245614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 23756753 - 23756809
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  23756753 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 23756809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 23822209 - 23822265
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  23822209 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 23822265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 387
Target Start/End: Complemental strand, 31758204 - 31758133
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggat-aaaagttatttctttattt 387  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  || ||||||| |||||||||||    
T  31758204 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaaagttctttctttattt 31758133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 23435322 - 23435378
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||| || ||||||||||||||||||||||||||||||||||  |||||||||    
T  23435322 attcatctcttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 23435378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 23446689 - 23446745
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||| || ||||||||||||||||||||||||||||||||||  |||||||||    
T  23446689 attcatctcttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 23446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 20738363 - 20738428
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttattt 387  Q
    ||||||||||||||||||||||||| |||| |||||||||||||  ||||||||| || ||||||||    
T  20738363 tcatcttttgttcttggaattcaat-agtggcaattgtctttcttaataaaagttcttcctttattt 20738428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 23267701 - 23267748
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  23267701 ttcttggaattcaataagtgacaattgtctttct-aataaaagttattt 23267748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 2953612 - 2953570
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  2953612 tcatcttttgttcttggaattcaat-agtgacaattgtctttct 2953570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 12410533 - 12410595
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||  |  |||||||||||||    
T  12410533 acaattcatcttttgttcttggaattcaataa-tgacaattgttttctttaataaaagttattt 12410595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 359
Target Start/End: Original strand, 31414623 - 31414665
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtc 359  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  31414623 acaattcatcttttgttcttggaattcaat-agtgacaattgtc 31414665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 6406290 - 6406323
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  6406290 ttcttggaattcaataagtgacaattgtctttct 6406323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 9728980 - 9728947
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  9728980 ttcttggaattcaataagtgacaattgtctttct 9728947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 25741696 - 25741729
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  25741696 ttcttggaattcaataagtgacaattgtctttct 25741729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 29053102 - 29053069
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  29053102 ttcttggaattcaataagtgacaattgtctttct 29053069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 33701503 - 33701536
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  33701503 ttcttggaattcaataagtgacaattgtctttct 33701536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 5078283 - 5078253
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  5078283 ttggaattcaataagtgacaattgtctttct 5078253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 22942365 - 22942406
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  22942365 acaattcatcttttgttcttggaaat-aataagtgacaattgt 22942406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 26745113 - 26745185
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttatttac 408  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||| | | |||||||| ||  |||||||||||    
T  26745113 ttggaattcaataagtgacaattgtcttt-tgaataaaagttcttt-tctttttctttactttcttgttatttac 26745185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 3388035 - 3388068
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  3388035 ttcttggaattcaatatgtgacaattgtctttct 3388068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 18483780 - 18483747
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  18483780 ttcttggaattcaatatgtgacaattgtctttct 18483747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 21401053 - 21401020
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||| ||||||    
T  21401053 ttcttggaattcaataagtgacaattgcctttct 21401020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 21734686 - 21734653
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  21734686 ttcttggaattcaatatgtgacaattgtctttct 21734653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 22856169 - 22856202
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||| |||||    
T  22856169 ttcttggaattcaataagtgacaattgtttttct 22856202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 35307716 - 35307676
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  35307716 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 35307676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 42789904 - 42789871
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  42789904 ttcttggaattcaatatgtgacaattgtctttct 42789871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 20449900 - 20449853
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  20449900 ttcttggaatacaatatgtgacaattgtctttct-aataaaagttattt 20449853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 406
Target Start/End: Original strand, 3279839 - 3279921
Alignment:
Q  323 atcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctttagttctttgttattt 406  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||| ||| |||||||||    
T  3279839 atcttttattcttggaattcaataagtggcaattgtctttcttcataaaagttctttctttatttcttta-ttccttgttattt 3279921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 1993450 - 1993506
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  1993450 attcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagtt 1993506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 1998609 - 1998665
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  1998609 attcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagtt 1998665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 14137815 - 14137751
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||    
T  14137815 attcatcttttgttcttggaattcaataagtgtcaattgtctttctcattaaaagttatttcttt 14137751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 14348163 - 14348087
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttcttta 392  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||||  ||||||||| |||||||| |||||||    
T  14348163 acaaatcatcttttattcttgaaattcaataagtgacaattgtctttcttaataaaagttctttctttacttcttta 14348087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 21265171 - 21265111
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  21265171 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttattt 21265111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 17480468 - 17480525
Alignment:
Q  318 aattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  17480468 aattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 17480525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 3212540 - 3212596
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  3212540 attcatcttttattcttggaattcactaagtgacaattgtctttctgaataaaagtt 3212596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 5687680 - 5687736
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  5687680 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 5687736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 17388476 - 17388532
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  17388476 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 17388532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 13418392 - 13418450
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  13418392 acaattcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagtt 13418450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 19567089 - 19567030
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||    
T  19567089 acaattcatcttttattcttgaaattcaataagtgacaattgtctttcttaataaaagtt 19567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 2005952 - 2006008
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  2005952 attcatctttcattcttggaattcaataagtgacaattgtctttcttaataaaagtt 2006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 5666536 - 5666592
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  5666536 attcatattttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 5666592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 7908528 - 7908586
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  7908528 acaaatcatcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagtt 7908586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 17209653 - 17209719
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||||||||  ||||||||| |||||||    
T  17209653 acaattcatcttttgtttttgaaattcaata-gtgacaattgtctttcttaataaaagttttttcttt 17209719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 27407216 - 27407282
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    |||||||||||||||||| | ||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  27407216 acaattcatcttttgttcctagaaatcaataagtgacaattgtc-ttcttaataaaagttatttcttt 27407282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 11827495 - 11827451
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctt 361  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  11827495 acaattcatcttttgttcttggaattcaat-agtgacaattgtctt 11827451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 375
Target Start/End: Complemental strand, 20225306 - 20225254
Alignment:
Q  322 catcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  20225306 catcttttgttcttggaattcaat-agtgacaattgtctttcttaataaaagtt 20225254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 20156105 - 20156062
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  20156105 ttcttggaattcaataagtgacaattgtctttct-gataaaagtt 20156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 10850812 - 10850753
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||| |||||||||||||||| ||||||||||| || ||||||||||||  |||||||||    
T  10850812 acaaatcatcttttgttcttgaaattcaataagagaaaattgtctttcttaataaaagtt 10850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 2132 - 2099
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  2132 ttcttggaattcaataagtgacaattgtctttct 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 13325827 - 13325860
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  13325827 ttcttggaattcaataagtgacaattgtctttct 13325860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 13665117 - 13665150
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  13665117 ttcttggaattcaataagtgacaattgtctttct 13665150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 50908971 - 50908938
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  50908971 ttcttggaattcaataagtgacaattgtctttct 50908938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 14071805 - 14071749
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||| | |||||||||||||||||||| |  |||||||||    
T  14071805 attcatcttttattcttggaaattaataagtgacaattgtctttattaataaaagtt 14071749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 14457370 - 14457329
Alignment:
Q  333 cttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  14457370 cttggaattcaataagtgacaattgtcttt-tgaataaaagtt 14457329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 53160615 - 53160585
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  53160615 ttggaattcaataagtgacaattgtctttct 53160585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 13052348 - 13052388
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  13052348 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 13052388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 13691248 - 13691281
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||| ||||||||||||||||||||||||||||    
T  13691248 ttcttagaattcaataagtgacaattgtctttct 13691281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 14445322 - 14445282
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  14445322 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 14445282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 20154977 - 20155010
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  20154977 ttcttggaattcaatatgtgacaattgtctttct 20155010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 15425240 - 15425204
Alignment:
Q  328 ttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  15425240 ttgttcttggaatgcaatatgtgacaattgtctttct 15425204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 37978386 - 37978339
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||||    
T  37978386 ttcttggaatccaataagtgacagttgtctttct-aataaaagttattt 37978339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 21333 - 21401
Alignment:
Q  321 tcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttatttctt 390  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||    
T  21333 tcatcttttgttcttggaattcaataa-tgacaattgtctttcttaataaaagttctttctttatttctt 21401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 191238 - 191178
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  191238 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttattt 191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 26205 - 26256
Alignment:
Q  151 ttctattgtgagctatttctatttaagaatagctattatagaaaagaaccat 202  Q
    ||||||||| |||||| ||||||| ||||| || ||||||||||||||||||    
T  26205 ttctattgttagctatatctatttgagaatcgcaattatagaaaagaaccat 26256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 13048 - 13105
Alignment:
Q  318 aattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  13048 aattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 13105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 12428 - 12372
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  12428 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 12372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 14704 - 14648
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  14704 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 14648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 232349 - 232293
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  232349 attcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 232293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 1114 - 1181
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttcttt 383  Q
    ||||||||||||||||||||| |||||||||||| | | ||||||||||  |||||||||||||||||    
T  1114 acaattcatcttttgttcttgtaattcaataagtaaaatttgtctttcttaataaaagttatttcttt 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 12632 - 12576
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  12632 attcatttttttttcttggaattcaataagtgacaattgtctttcttaataaaagtt 12576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 19675 - 19731
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||    
T  19675 attcatcttttattcttggaattcgataagtgacaattgtctttcttaataaaagtt 19731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 150950 - 150890
Alignment:
Q  318 aattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||  |||||||||||||    
T  150950 aattcatcttttattaatggaattcaataagtgacaattgtctttct-aataaaagttattt 150890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 153951 - 153918
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  153951 ttcttggaattcaataagtgacaattgtctttct 153918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 245885 - 245855
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  245885 ttggaattcaataagtgacaattgtctttct 245855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 13237 - 13284
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13237 ttcttggaattcaataagtgacaattgtctttct-aataaaagttattt 13284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 4539 - 4586
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagttattt 379  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4539 ttcttggaattcaataagtgacaattgtctttct-aataaaagttattt 4586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 169441 - 169398
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||  |||||||||||||||||||||||||||||||||    
T  169441 attcatctttt--tcttggaattcaataagtgacaattgtctttct 169398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 172743 - 172784
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  172743 acaattcatcttttgttcttggaattcaat-agtgacaattgt 172784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 162489 - 162522
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||| |||||||||||||||||||||||||||    
T  162489 ttcttgaaattcaataagtgacaattgtctttct 162522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 1877 - 1844
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  1877 ttcttggaattcaataagtgacaattgtctttct 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 9693 - 9660
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||| ||||||||||||||||||||||||||||    
T  9693 ttcttagaattcaataagtgacaattgtctttct 9660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 3858 - 3891
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  3858 ttcttggaattcaataagtgacaattgtctttct 3891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 982 - 949
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  982 ttcttggaattcaataagtgacaattgtctttct 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 35114 - 35081
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  35114 ttcttggaattcaataagtgacaattgtctttct 35081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 23162 - 23195
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  23162 ttcttggaattcaataagtgacaattgtctttct 23195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 110567 - 110600
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  110567 ttcttggaattcaataagtgacaattgtctttct 110600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 121566 - 121599
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  121566 ttcttggaattcaataagtgacaattgtctttct 121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 24390 - 24357
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||||||||||||||||||||||||    
T  24390 ttcttggaattcaataagtgacaattgtctttct 24357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 387
Target Start/End: Original strand, 31659 - 31729
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagttatttctttattt 387  Q
    |||||| ||||||||||||||||||| ||  ||| |||||||||||| |  ||||||||| |||||||||||    
T  31659 acaattaatcttttgttcttggaatt-aagtagtaacaattgtcttttttaataaaagttctttctttattt 31729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 6559 - 6529
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||||||    
T  6559 ttggaattcaataagtgacaattgtctttct 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 520755 - 520796
Alignment:
Q  316 acaattcatcttttgttcttggaattcaataagtgacaattgt 358  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  520755 acaattcatcttttgttattggaattcaat-agtgacaattgt 520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 1406 - 1446
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  1406 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 1864 - 1824
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  1864 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 1824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 5452 - 5492
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  5452 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 5492  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 5737 - 5770
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||||| |||||    
T  5737 ttcttggaattcaataagtgacaattgtttttct 5770  T

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Target: scaffold0317 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 14258 - 14225
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||| ||||||||||||||||||||||||||||    
T  14258 ttctttgaattcaataagtgacaattgtctttct 14225  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 21741 - 21701
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  21741 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 21701  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 17898 - 17869
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtct 360  Q
    ||||||||||||||||||||||||||||||    
T  17898 ttcttggaattcaataagtgacaattgtct 17869  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 60923 - 60890
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||| ||||||||||||||||||||||    
T  60923 ttcttggaatttaataagtgacaattgtctttct 60890  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 56765 - 56732
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||||||||||||| |||||||    
T  56765 ttcttggaattcaataagtgacaattatctttct 56732  T

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Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 72245 - 72212
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||| ||||||||||||||||||||||||||    
T  72245 ttcttgggattcaataagtgacaattgtctttct 72212  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 84316 - 84276
Alignment:
Q  334 ttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  84316 ttggaattcaataagtgacaattgtcttt-tgaataaaagtt 84276  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 117791 - 117824
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttct 364  Q
    |||||||||||||||| |||||||||||||||||    
T  117791 ttcttggaattcaatatgtgacaattgtctttct 117824  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 4858 - 4901
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||| |||||||||||||||||||||||||| || |||||||||    
T  4858 ttcttagaattcaataagtgacaattgtcttt-tgaataaaagtt 4901  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 36998 - 37034
Alignment:
Q  328 ttgttcttggaattcaataagtgacaattgtctttct 364  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  36998 ttgttcttggaatgcaatatgtgacaattgtctttct 37034  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 23275 - 23330
Alignment:
Q  319 attcatcttttgttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    ||||||||||||||||||||| | |||||||||||||||| | | || |||||||||    
T  23275 attcatcttttgttcttggaaat-aataagtgacaattgtttctttgaataaaagtt 23330  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 117772 - 117815
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||    
T  117772 ttcttggaatacaatatgtgacaattgtctttct-gataaaagtt 117815  T

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Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 124016 - 124059
Alignment:
Q  331 ttcttggaattcaataagtgacaattgtctttctggataaaagtt 375  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||    
T  124016 ttcttggaatacaatatgtgacaattgtctttct-gataaaagtt 124059  T

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