View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1457-2-Insertion-5 (Length: 355)
Name: NF1457-2-Insertion-5
Description: NF1457-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457-2-Insertion-5 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 8 - 308
Target Start/End: Complemental strand, 6309986 - 6309686
Alignment:
| Q |
8 |
agtagcagtaaatgaagaaggaaagttgcatgttacaattgccaagccataaaagtatacatccaaaattaacacataattaactgtgttaaccctaagg |
107 |
Q |
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| T |
6309986 |
agtagcagtaaatgaagaaggaaagttgaatgttacaattgccaagccaaaaaagtatacatccaaaattaacatataattaactgtgttaaccccaagg |
6309887 |
T |
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| Q |
108 |
gaggtaggtgtttagttgaaaaccagaggatgtttttgttatgcagtgatacatcagggaggttagtgtattttttccaaattaaattccaaaaaatact |
207 |
Q |
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| T |
6309886 |
gaggtaggtgtttagttgaaaactagaggagatttttgttatgcagtgaaacattaaggaggttagtgtaatttctccaaatcaaattccaaaaaatact |
6309787 |
T |
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| Q |
208 |
ttaaaattaaaacgaactataatatcatttatggtttaatttagcatttacaacttgattcaaaatgtctaaattcaaattaacaaccggtgactaaagt |
307 |
Q |
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| T |
6309786 |
ttaaaattaaaacgaactataatatcatttatgctttaatttagcatttacaacttgattcaaaatgtttaaattcaaattaacaacccgtggctaaagt |
6309687 |
T |
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| Q |
308 |
t |
308 |
Q |
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| T |
6309686 |
t |
6309686 |
T |
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