View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14570_low_2 (Length: 434)

Name: NF14570_low_2
Description: NF14570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14570_low_2
NF14570_low_2
[»] chr2 (58 HSPs)
chr2 (19-420)||(30717444-30717839)
chr2 (28-140)||(37419767-37419879)
chr2 (34-128)||(26769547-26769641)
chr2 (36-140)||(15657888-15657992)
chr2 (22-136)||(35056896-35057010)
chr2 (34-138)||(11223793-11223896)
chr2 (34-140)||(32749754-32749860)
chr2 (36-105)||(2438661-2438730)
chr2 (36-185)||(36756275-36756423)
chr2 (34-140)||(34784911-34785017)
chr2 (34-140)||(36096304-36096410)
chr2 (35-136)||(4882626-4882727)
chr2 (35-140)||(27286222-27286327)
chr2 (34-105)||(18840953-18841024)
chr2 (34-105)||(24009343-24009414)
chr2 (47-105)||(12224271-12224329)
chr2 (35-105)||(28596517-28596587)
chr2 (35-137)||(44860347-44860449)
chr2 (34-138)||(12668352-12668456)
chr2 (31-118)||(27084304-27084391)
chr2 (31-98)||(42511319-42511386)
chr2 (46-179)||(14996171-14996297)
chr2 (34-203)||(37558939-37559096)
chr2 (36-104)||(19942314-19942382)
chr2 (204-268)||(30728484-30728548)
chr2 (34-98)||(34993922-34993986)
chr2 (34-98)||(38117099-38117163)
chr2 (42-140)||(28524450-28524548)
chr2 (105-167)||(19536397-19536459)
chr2 (45-105)||(5040782-5040842)
chr2 (53-105)||(5367240-5367292)
chr2 (29-140)||(18889514-18889626)
chr2 (34-105)||(15972921-15972992)
chr2 (33-140)||(18420362-18420469)
chr2 (105-185)||(20473302-20473381)
chr2 (36-82)||(42832234-42832280)
chr2 (99-140)||(33153448-33153489)
chr2 (48-105)||(37411198-37411255)
chr2 (34-70)||(19536361-19536397)
chr2 (100-140)||(23058437-23058477)
chr2 (34-93)||(15907851-15907910)
chr2 (35-70)||(18255945-18255980)
chr2 (105-140)||(18421987-18422022)
chr2 (30-109)||(19980719-19980798)
chr2 (47-94)||(29176446-29176493)
chr2 (102-140)||(974771-974809)
chr2 (35-77)||(3444827-3444869)
chr2 (37-139)||(17776612-17776714)
chr2 (34-136)||(24975255-24975356)
chr2 (111-140)||(2438725-2438754)
chr2 (39-76)||(27460111-27460148)
chr2 (111-140)||(30404856-30404885)
chr2 (76-125)||(34337152-34337201)
chr2 (32-92)||(3414926-3414986)
chr2 (34-82)||(18631351-18631399)
chr2 (105-137)||(21624294-21624326)
chr2 (57-97)||(30404813-30404853)
chr2 (84-140)||(44635522-44635573)
[»] chr6 (54 HSPs)
chr6 (29-179)||(8365443-8365592)
chr6 (33-185)||(16766677-16766828)
chr6 (35-140)||(31384944-31385048)
chr6 (34-140)||(10339054-10339161)
chr6 (29-140)||(18367860-18367971)
chr6 (34-140)||(5970037-5970143)
chr6 (34-140)||(8714004-8714110)
chr6 (34-140)||(9107299-9107405)
chr6 (34-140)||(9522915-9523021)
chr6 (37-105)||(32978842-32978910)
chr6 (34-140)||(9629407-9629513)
chr6 (34-140)||(16488519-16488625)
chr6 (34-105)||(4877991-4878061)
chr6 (32-138)||(17435225-17435331)
chr6 (34-98)||(17327590-17327654)
chr6 (35-203)||(17841530-17841686)
chr6 (76-140)||(26562713-26562777)
chr6 (34-202)||(28152062-28152217)
chr6 (32-185)||(10770605-10770753)
chr6 (36-138)||(12696350-12696446)
chr6 (34-105)||(34595182-34595253)
chr6 (34-140)||(7248382-7248488)
chr6 (32-203)||(17302518-17302689)
chr6 (34-167)||(3209379-3209518)
chr6 (101-140)||(9911524-9911563)
chr6 (34-137)||(10294134-10294237)
chr6 (34-105)||(28715343-28715414)
chr6 (34-77)||(34446647-34446690)
chr6 (32-70)||(5732472-5732510)
chr6 (31-105)||(7977767-7977841)
chr6 (46-92)||(21044826-21044872)
chr6 (34-83)||(13360313-13360362)
chr6 (89-138)||(21395292-21395341)
chr6 (30-82)||(9027238-9027290)
chr6 (34-70)||(10649371-10649407)
chr6 (46-82)||(21068084-21068120)
chr6 (35-93)||(9658939-9658998)
chr6 (34-137)||(34073278-34073379)
chr6 (32-82)||(7938171-7938221)
chr6 (64-138)||(8931561-8931635)
chr6 (107-140)||(1191702-1191735)
chr6 (36-109)||(5000557-5000630)
chr6 (36-105)||(7265535-7265604)
chr6 (105-138)||(7977830-7977863)
chr6 (37-82)||(9025448-9025493)
chr6 (56-105)||(12627539-12627588)
chr6 (27-105)||(12868609-12868691)
chr6 (73-138)||(25038039-25038104)
chr6 (34-82)||(7625187-7625235)
chr6 (32-68)||(7723197-7723233)
chr6 (37-89)||(7996325-7996377)
chr6 (37-89)||(8022424-8022476)
chr6 (34-70)||(9911482-9911518)
chr6 (34-82)||(34290024-34290072)
[»] chr1 (76 HSPs)
chr1 (34-140)||(47989521-47989627)
chr1 (34-140)||(5944307-5944413)
chr1 (46-138)||(6612112-6612204)
chr1 (33-140)||(32461392-32461498)
chr1 (34-140)||(31694639-31694745)
chr1 (34-134)||(40917779-40917879)
chr1 (34-202)||(6427425-6427594)
chr1 (34-140)||(9828068-9828174)
chr1 (34-198)||(18556385-18556548)
chr1 (39-136)||(9629834-9629931)
chr1 (34-140)||(25934640-25934746)
chr1 (36-140)||(1486646-1486744)
chr1 (34-138)||(30173691-30173795)
chr1 (34-105)||(37598879-37598950)
chr1 (34-105)||(22515827-22515898)
chr1 (35-105)||(40258874-40258944)
chr1 (32-105)||(18337377-18337450)
chr1 (33-140)||(25361910-25362013)
chr1 (35-125)||(21032245-21032335)
chr1 (36-130)||(17778580-17778670)
chr1 (83-140)||(44482254-44482311)
chr1 (34-82)||(1704935-1704983)
chr1 (34-202)||(46348323-46348479)
chr1 (34-105)||(1815305-1815376)
chr1 (34-105)||(51410073-51410144)
chr1 (88-138)||(5376483-5376533)
chr1 (34-79)||(6574051-6574096)
chr1 (34-140)||(17831462-17831566)
chr1 (32-77)||(27965938-27965983)
chr1 (36-105)||(42359391-42359460)
chr1 (35-95)||(10577676-10577736)
chr1 (63-139)||(27471524-27471600)
chr1 (84-136)||(28273067-28273119)
chr1 (30-78)||(36878541-36878589)
chr1 (101-140)||(24577182-24577221)
chr1 (34-105)||(38078601-38078672)
chr1 (38-105)||(39130711-39130778)
chr1 (34-104)||(2896061-2896131)
chr1 (30-140)||(15449166-15449267)
chr1 (36-98)||(16297223-16297285)
chr1 (78-140)||(34371737-34371799)
chr1 (34-88)||(34712323-34712377)
chr1 (34-140)||(36906021-36906126)
chr1 (99-140)||(113323-113364)
chr1 (64-105)||(21530737-21530778)
chr1 (33-98)||(41597409-41597474)
chr1 (34-82)||(113364-113412)
chr1 (101-179)||(1704988-1705065)
chr1 (34-82)||(2218299-2218347)
chr1 (34-82)||(15765829-15765877)
chr1 (106-138)||(18190109-18190141)
chr1 (50-98)||(31015092-31015140)
chr1 (45-132)||(38503352-38503437)
chr1 (35-70)||(48415667-48415702)
chr1 (101-139)||(2218264-2218302)
chr1 (102-140)||(6332694-6332732)
chr1 (34-80)||(21365992-21366038)
chr1 (34-72)||(35702542-35702580)
chr1 (48-98)||(40181926-40181976)
chr1 (32-82)||(48040412-48040462)
chr1 (35-140)||(6414932-6415036)
chr1 (47-140)||(16164257-16164350)
chr1 (105-138)||(19058856-19058889)
chr1 (111-140)||(31015067-31015096)
chr1 (34-98)||(34741901-34741965)
chr1 (111-140)||(40258939-40258968)
chr1 (56-105)||(43492456-43492505)
chr1 (45-89)||(351029-351073)
chr1 (113-178)||(13011223-13011288)
chr1 (49-105)||(19637816-19637872)
chr1 (34-70)||(22947813-22947849)
chr1 (105-137)||(24334705-24334737)
chr1 (34-82)||(29144320-29144368)
chr1 (100-140)||(35919271-35919311)
chr1 (34-82)||(46940748-46940796)
chr1 (48-136)||(48147980-48148068)
[»] chr7 (63 HSPs)
chr7 (29-140)||(24339666-24339777)
chr7 (34-140)||(2334274-2334379)
chr7 (34-140)||(7438730-7438836)
chr7 (34-140)||(5409771-5409871)
chr7 (34-140)||(9778524-9778624)
chr7 (35-203)||(32308082-32308249)
chr7 (34-134)||(25822685-25822785)
chr7 (36-140)||(26033392-26033496)
chr7 (37-135)||(7058455-7058551)
chr7 (34-164)||(32093954-32094079)
chr7 (33-140)||(43027403-43027504)
chr7 (34-105)||(21880200-21880271)
chr7 (36-180)||(9408265-9408408)
chr7 (38-140)||(27229244-27229346)
chr7 (35-140)||(11665370-11665475)
chr7 (32-129)||(41414911-41415008)
chr7 (33-105)||(598256-598328)
chr7 (39-138)||(13770717-13770810)
chr7 (35-105)||(20549839-20549909)
chr7 (34-136)||(21930656-21930758)
chr7 (88-136)||(11272569-11272617)
chr7 (33-105)||(21864856-21864928)
chr7 (47-180)||(6630854-6630986)
chr7 (34-105)||(15680857-15680928)
chr7 (57-140)||(21560527-21560610)
chr7 (34-105)||(33994260-33994331)
chr7 (57-138)||(6028651-6028732)
chr7 (54-98)||(8234201-8234245)
chr7 (100-140)||(18039023-18039063)
chr7 (32-92)||(29763127-29763187)
chr7 (35-138)||(4794915-4795018)
chr7 (28-98)||(1433514-1433584)
chr7 (34-136)||(11831460-11831562)
chr7 (58-140)||(15902846-15902928)
chr7 (38-88)||(40287306-40287356)
chr7 (34-83)||(5307326-5307375)
chr7 (37-78)||(8842282-8842323)
chr7 (46-95)||(10043002-10043051)
chr7 (61-138)||(22801697-22801774)
chr7 (101-138)||(27945067-27945104)
chr7 (34-105)||(7133212-7133284)
chr7 (33-105)||(18212972-18213044)
chr7 (30-82)||(40131935-40131987)
chr7 (34-85)||(1401091-1401142)
chr7 (35-98)||(20545185-20545248)
chr7 (46-105)||(26733352-26733411)
chr7 (104-168)||(3991321-3991384)
chr7 (170-204)||(21139057-21139091)
chr7 (77-139)||(26329354-26329416)
chr7 (33-74)||(3991392-3991433)
chr7 (149-206)||(7197340-7197397)
chr7 (49-98)||(15836439-15836488)
chr7 (33-70)||(28155637-28155674)
chr7 (39-138)||(43250019-43250118)
chr7 (65-98)||(48246773-48246806)
chr7 (73-109)||(9933328-9933364)
chr7 (100-140)||(22602705-22602745)
chr7 (36-92)||(22868108-22868164)
chr7 (31-71)||(29812595-29812635)
chr7 (32-68)||(30813882-30813918)
chr7 (34-70)||(35862034-35862070)
chr7 (102-138)||(43243103-43243139)
chr7 (39-87)||(45056874-45056922)
[»] chr3 (64 HSPs)
chr3 (34-185)||(41961579-41961729)
chr3 (36-194)||(4987222-4987380)
chr3 (34-140)||(34185052-34185158)
chr3 (34-200)||(14209079-14209243)
chr3 (46-203)||(28812477-28812633)
chr3 (36-140)||(28918025-28918120)
chr3 (34-105)||(40993275-40993346)
chr3 (35-136)||(14216920-14217021)
chr3 (35-136)||(14223049-14223150)
chr3 (32-136)||(15796221-15796325)
chr3 (34-140)||(49651716-49651821)
chr3 (33-140)||(27505270-27505371)
chr3 (36-202)||(29508407-29508567)
chr3 (34-136)||(8039764-8039866)
chr3 (58-140)||(14832123-14832205)
chr3 (32-105)||(55401123-55401196)
chr3 (34-202)||(20503429-20503584)
chr3 (34-136)||(16789040-16789141)
chr3 (33-105)||(10955000-10955075)
chr3 (35-185)||(15999951-16000095)
chr3 (34-98)||(7171556-7171620)
chr3 (29-105)||(13845460-13845536)
chr3 (38-185)||(14829670-14829816)
chr3 (84-203)||(34910279-34910397)
chr3 (34-140)||(55212987-55213092)
chr3 (45-98)||(3631739-3631792)
chr3 (35-105)||(8789489-8789561)
chr3 (29-130)||(13806270-13806370)
chr3 (35-138)||(37077384-37077488)
chr3 (77-140)||(750590-750653)
chr3 (83-138)||(16192728-16192783)
chr3 (34-88)||(5407199-5407253)
chr3 (34-104)||(8842378-8842448)
chr3 (38-140)||(11665968-11666070)
chr3 (32-82)||(16789583-16789633)
chr3 (33-82)||(25074866-25074915)
chr3 (35-96)||(32804485-32804546)
chr3 (34-82)||(3163971-3164019)
chr3 (30-82)||(8039289-8039341)
chr3 (35-98)||(15864887-15864950)
chr3 (111-185)||(35994744-35994816)
chr3 (34-82)||(40052383-40052431)
chr3 (35-82)||(1389909-1389956)
chr3 (89-140)||(1509563-1509614)
chr3 (31-70)||(4990909-4990948)
chr3 (105-140)||(25775533-25775568)
chr3 (54-109)||(34307735-34307790)
chr3 (34-136)||(17005548-17005650)
chr3 (79-179)||(21479104-21479198)
chr3 (33-78)||(2408589-2408634)
chr3 (99-140)||(3164019-3164060)
chr3 (34-71)||(3730108-3730145)
chr3 (34-98)||(5440967-5441032)
chr3 (101-179)||(14747547-14747625)
chr3 (111-140)||(26508134-26508163)
chr3 (34-82)||(4466540-4466588)
chr3 (102-138)||(4990964-4991000)
chr3 (34-138)||(9800066-9800170)
chr3 (34-82)||(10455867-10455915)
chr3 (34-82)||(11610580-11610628)
chr3 (34-82)||(21211365-21211413)
chr3 (100-140)||(25948882-25948922)
chr3 (34-98)||(26492145-26492209)
chr3 (73-105)||(45451601-45451633)
[»] chr5 (62 HSPs)
chr5 (35-138)||(21542056-21542159)
chr5 (32-138)||(21522776-21522882)
chr5 (32-138)||(21533342-21533448)
chr5 (34-140)||(39698565-39698671)
chr5 (33-140)||(7677729-7677836)
chr5 (34-179)||(31084309-31084447)
chr5 (35-140)||(6401522-6401627)
chr5 (47-140)||(19579725-19579818)
chr5 (33-140)||(21576684-21576780)
chr5 (46-136)||(15382507-15382592)
chr5 (34-140)||(21814285-21814391)
chr5 (36-105)||(30502330-30502399)
chr5 (36-105)||(30542673-30542742)
chr5 (58-180)||(30183534-30183655)
chr5 (34-140)||(37328775-37328879)
chr5 (35-140)||(3966527-3966632)
chr5 (37-105)||(39268541-39268609)
chr5 (111-204)||(14674230-14674322)
chr5 (45-140)||(17088309-17088399)
chr5 (34-104)||(17123097-17123166)
chr5 (36-105)||(21190998-21191067)
chr5 (89-179)||(21351889-21351978)
chr5 (36-140)||(23015926-23016024)
chr5 (34-105)||(28588614-28588685)
chr5 (36-203)||(43001762-43001922)
chr5 (34-105)||(43564929-43565000)
chr5 (34-140)||(30098350-30098456)
chr5 (34-140)||(40131645-40131751)
chr5 (37-126)||(19452998-19453087)
chr5 (33-94)||(21194062-21194123)
chr5 (34-98)||(14873577-14873641)
chr5 (58-138)||(36642716-36642795)
chr5 (32-140)||(41091184-41091292)
chr5 (38-105)||(30098982-30099049)
chr5 (34-105)||(42893408-42893479)
chr5 (34-98)||(19820328-19820389)
chr5 (36-94)||(24238603-24238661)
chr5 (87-136)||(21319927-21319976)
chr5 (29-86)||(38464308-38464365)
chr5 (33-98)||(39205940-39206005)
chr5 (88-140)||(13287383-13287434)
chr5 (34-140)||(19552476-19552578)
chr5 (34-98)||(32630675-32630739)
chr5 (148-203)||(6035445-6035500)
chr5 (105-140)||(6247646-6247681)
chr5 (34-137)||(11685966-11686068)
chr5 (105-140)||(15884012-15884047)
chr5 (46-140)||(6418056-6418150)
chr5 (34-96)||(16304366-16304428)
chr5 (111-179)||(21191062-21191129)
chr5 (46-84)||(39342511-39342549)
chr5 (111-140)||(7218273-7218302)
chr5 (101-167)||(30135311-30135377)
chr5 (34-71)||(35017125-35017162)
chr5 (33-98)||(42029807-42029872)
chr5 (45-109)||(43554570-43554634)
chr5 (38-74)||(4105338-4105374)
chr5 (34-98)||(6770596-6770655)
chr5 (34-70)||(10298633-10298669)
chr5 (34-70)||(22423764-22423800)
chr5 (34-98)||(27932290-27932354)
chr5 (34-82)||(39695951-39695998)
[»] scaffold0136 (1 HSPs)
scaffold0136 (34-140)||(3778-3884)
[»] chr8 (68 HSPs)
chr8 (32-179)||(22651962-22652108)
chr8 (32-179)||(15816056-15816202)
chr8 (34-179)||(29510233-29510377)
chr8 (32-140)||(28745522-28745630)
chr8 (35-140)||(29447040-29447145)
chr8 (34-134)||(4673354-4673454)
chr8 (33-140)||(6065585-6065692)
chr8 (34-140)||(34450961-34451072)
chr8 (34-140)||(11803283-11803389)
chr8 (32-136)||(21465440-21465544)
chr8 (65-140)||(2572016-2572091)
chr8 (32-203)||(36450692-36450851)
chr8 (34-140)||(8343340-8343446)
chr8 (34-140)||(26902104-26902210)
chr8 (34-98)||(31557051-31557115)
chr8 (34-105)||(18407767-18407838)
chr8 (34-140)||(22197671-22197777)
chr8 (31-105)||(3951473-3951547)
chr8 (33-105)||(33405323-33405395)
chr8 (38-105)||(5813640-5813707)
chr8 (36-98)||(3025606-3025668)
chr8 (34-140)||(11927015-11927121)
chr8 (34-140)||(11944689-11944795)
chr8 (35-105)||(43737752-43737822)
chr8 (46-94)||(22943301-22943349)
chr8 (77-140)||(24362173-24362237)
chr8 (57-139)||(12570461-12570542)
chr8 (34-84)||(13397620-13397670)
chr8 (49-91)||(14639745-14639787)
chr8 (102-140)||(25566865-25566903)
chr8 (34-127)||(27067231-27067322)
chr8 (36-105)||(15023199-15023268)
chr8 (36-105)||(20679337-20679406)
chr8 (34-82)||(8798793-8798841)
chr8 (34-78)||(13436910-13436954)
chr8 (34-105)||(17751703-17751775)
chr8 (34-105)||(17760690-17760762)
chr8 (34-82)||(22204714-22204762)
chr8 (33-140)||(24858036-24858136)
chr8 (34-82)||(30067968-30068016)
chr8 (30-70)||(34127168-34127208)
chr8 (45-105)||(40332239-40332299)
chr8 (33-140)||(41831874-41831975)
chr8 (36-138)||(44067542-44067644)
chr8 (105-140)||(4948676-4948711)
chr8 (31-70)||(9383049-9383088)
chr8 (35-82)||(13009423-13009469)
chr8 (25-92)||(14134760-14134827)
chr8 (105-136)||(15023257-15023288)
chr8 (32-98)||(39820483-39820549)
chr8 (50-105)||(44462151-44462206)
chr8 (50-105)||(44469684-44469739)
chr8 (34-84)||(13403175-13403225)
chr8 (33-140)||(18964201-18964310)
chr8 (35-105)||(24205749-24205819)
chr8 (39-77)||(31109463-31109501)
chr8 (45-98)||(126298-126351)
chr8 (105-138)||(24669459-24669492)
chr8 (49-137)||(28384937-28385026)
chr8 (111-140)||(40332215-40332244)
chr8 (34-98)||(7253627-7253691)
chr8 (104-140)||(8342996-8343032)
chr8 (34-82)||(8343038-8343086)
chr8 (34-98)||(16641909-16641973)
chr8 (61-109)||(26915202-26915250)
chr8 (112-140)||(30077394-30077422)
chr8 (33-69)||(31514938-31514974)
chr8 (34-82)||(33389295-33389343)
[»] chr4 (66 HSPs)
chr4 (34-185)||(19482648-19482798)
chr4 (35-140)||(30982808-30982913)
chr4 (34-98)||(28964188-28964252)
chr4 (34-140)||(24613630-24613736)
chr4 (34-105)||(16073442-16073513)
chr4 (34-105)||(23292926-23292997)
chr4 (34-140)||(715545-715642)
chr4 (34-140)||(752871-752968)
chr4 (34-140)||(5414101-5414207)
chr4 (61-138)||(37496730-37496807)
chr4 (36-140)||(19312359-19312463)
chr4 (34-94)||(29205527-29205587)
chr4 (35-138)||(847977-848080)
chr4 (35-137)||(3947702-3947798)
chr4 (34-140)||(22234819-22234925)
chr4 (34-140)||(47264010-47264116)
chr4 (37-140)||(28084546-28084640)
chr4 (34-105)||(49431074-49431145)
chr4 (34-140)||(903946-904052)
chr4 (34-92)||(3064868-3064926)
chr4 (34-140)||(46083920-46084026)
chr4 (36-105)||(4157484-4157553)
chr4 (103-201)||(30298910-30299008)
chr4 (103-201)||(30327778-30327876)
chr4 (39-136)||(30838238-30838335)
chr4 (47-140)||(38148667-38148760)
chr4 (34-140)||(11931304-11931410)
chr4 (24-139)||(19500777-19500892)
chr4 (38-105)||(21945551-21945618)
chr4 (57-140)||(27706129-27706212)
chr4 (90-136)||(12708175-12708221)
chr4 (33-105)||(12895213-12895285)
chr4 (35-98)||(14465006-14465069)
chr4 (34-109)||(16184875-16184950)
chr4 (34-105)||(34306744-34306815)
chr4 (34-105)||(35157925-35157996)
chr4 (34-104)||(8423658-8423728)
chr4 (90-140)||(11596337-11596387)
chr4 (36-82)||(22440559-22440605)
chr4 (34-140)||(36635348-36635449)
chr4 (36-105)||(4157197-4157266)
chr4 (34-95)||(18966567-18966628)
chr4 (84-140)||(4383391-4383447)
chr4 (34-138)||(5225542-5225646)
chr4 (36-68)||(7424742-7424774)
chr4 (30-109)||(20521781-20521861)
chr4 (34-109)||(24343556-24343632)
chr4 (35-82)||(5922532-5922579)
chr4 (105-140)||(12797338-12797373)
chr4 (33-140)||(12895054-12895151)
chr4 (111-203)||(29205408-29205497)
chr4 (34-97)||(32273461-32273524)
chr4 (34-97)||(35161092-35161155)
chr4 (105-140)||(42640553-42640588)
chr4 (47-140)||(21873315-21873406)
chr4 (47-140)||(21929176-21929267)
chr4 (84-138)||(51701284-51701338)
chr4 (34-71)||(5775304-5775341)
chr4 (32-69)||(7970584-7970621)
chr4 (64-105)||(29205492-29205533)
chr4 (34-82)||(11596297-11596345)
chr4 (100-140)||(13134474-13134514)
chr4 (34-82)||(17876237-17876285)
chr4 (34-82)||(18513175-18513223)
chr4 (112-140)||(28964255-28964283)
chr4 (73-125)||(53490732-53490784)
[»] scaffold0003 (1 HSPs)
scaffold0003 (34-179)||(241580-241724)
[»] scaffold0450 (1 HSPs)
scaffold0450 (34-178)||(8564-8707)
[»] scaffold0019 (1 HSPs)
scaffold0019 (34-140)||(71749-71855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (45-140)||(53204-53299)
[»] scaffold0306 (1 HSPs)
scaffold0306 (36-179)||(13386-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (36-179)||(21804-21941)
[»] scaffold0086 (1 HSPs)
scaffold0086 (33-140)||(2952-3059)
[»] scaffold0793 (1 HSPs)
scaffold0793 (34-140)||(4821-4918)
[»] scaffold0008 (1 HSPs)
scaffold0008 (36-139)||(263303-263406)
[»] scaffold0380 (1 HSPs)
scaffold0380 (34-92)||(8662-8720)
[»] scaffold0171 (2 HSPs)
scaffold0171 (34-140)||(23535-23641)
scaffold0171 (100-140)||(23444-23484)
[»] scaffold0004 (2 HSPs)
scaffold0004 (35-138)||(92833-92940)
scaffold0004 (106-140)||(123652-123686)
[»] scaffold0623 (1 HSPs)
scaffold0623 (35-140)||(5926-6031)
[»] scaffold0036 (1 HSPs)
scaffold0036 (36-140)||(9678-9782)
[»] scaffold0652 (1 HSPs)
scaffold0652 (35-105)||(403-473)
[»] scaffold0512 (1 HSPs)
scaffold0512 (31-105)||(4973-5047)
[»] scaffold0123 (1 HSPs)
scaffold0123 (66-140)||(44486-44560)
[»] scaffold0361 (1 HSPs)
scaffold0361 (34-98)||(14582-14646)
[»] scaffold0053 (1 HSPs)
scaffold0053 (34-105)||(8846-8917)
[»] scaffold0057 (1 HSPs)
scaffold0057 (34-137)||(24052-24155)
[»] scaffold0122 (1 HSPs)
scaffold0122 (35-140)||(8690-8795)
[»] scaffold0475 (1 HSPs)
scaffold0475 (34-98)||(3363-3427)
[»] scaffold0154 (1 HSPs)
scaffold0154 (33-124)||(13453-13544)
[»] scaffold0025 (1 HSPs)
scaffold0025 (102-140)||(23794-23832)
[»] scaffold0697 (1 HSPs)
scaffold0697 (64-105)||(1692-1733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (32-105)||(70326-70399)
[»] scaffold0223 (1 HSPs)
scaffold0223 (100-140)||(20196-20236)
[»] scaffold0279 (1 HSPs)
scaffold0279 (65-128)||(17840-17903)
[»] scaffold0103 (1 HSPs)
scaffold0103 (35-82)||(51894-51941)
[»] scaffold0083 (2 HSPs)
scaffold0083 (34-105)||(45470-45541)
scaffold0083 (105-138)||(45530-45563)
[»] scaffold0021 (2 HSPs)
scaffold0021 (34-93)||(2978-3037)
scaffold0021 (111-140)||(130506-130535)
[»] scaffold0007 (1 HSPs)
scaffold0007 (31-138)||(225194-225301)


Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-159; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 19 - 420
Target Start/End: Original strand, 30717444 - 30717839
Alignment:
Q  19 gatgttacctacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacactt 118  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  30717444 gatgttacctataagctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacactt 30717543  T
Q  119 gtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatagcctgcaagtaattgt 218  Q
    ||||||||||||||||||||||       ||||||||||| | ||||||||||||||||||  ||||       | ||||||||||||||||||||||||    
T  30717544 gtaattacactgaattatgtgatttttt-caaattattagctttgtcggtttgtcagtgtccgtgtc-------gcgcttcatagcctgcaagtaattgt 30717635  T
Q  219 ctacatat--ggtgacagtatttttggccaaaagataggtttgtatattagtgctggcaagtttgtgaatattttgtattttctacaagaagatgtaact 316  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30717636 ctacatatatggtgacaatatttttggccaaaagataggtttgtatattagtgctggcaagtttgtgaatattttgtattttctacaagaagatgtaact 30717735  T
Q  317 acgtttgcctatgtattgggcaatcgatatatatgtttaattaccctaaaattgatggtattttatatttgattacgtttacgtttgaagttattttacc 416  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30717736 acgtttgcctatgtactggacaatcaatatatatgtttaattaccctaaaattgatggtattttatatttgattacgtttacgtttgaagttattttacc 30717835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 37419879 - 37419767
Alignment:
Q  28 tacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattaca 127  Q
    ||||| |||||||||| |||||||||| |||||||||||||||| |||||||||| |  |||||||||||| |||||||||| || ||||||||||||||    
T  37419879 tacaacctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattaca 37419780  T
Q  128 ctgaattatgtga 140  Q
    ||||||| |||||    
T  37419779 ctgaattttgtga 37419767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 26769641 - 26769547
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacac 128  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacac 26769547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 15657992 - 15657888
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||||||||||||||||| ||| |||||||||||| | |||||||| |||||| |||||||| | |||||||| ||||| |||||||||||||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  136 tgtga 140  Q
    |||||    
T  15657892 tgtga 15657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 35057010 - 35056896
Alignment:
Q  22 gttacctacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgta 121  Q
    ||||| || ||||||||||||| ||||||||||  ||||||||||||  | |||||||||| ||||||||||||||| |||||||||| |||||| | ||    
T  35057010 gttacttataagctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatata 35056911  T
Q  122 attacactgaattat 136  Q
    |||||||||||||||    
T  35056910 attacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 11223793 - 11223896
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||  ||||||||||||||| ||||| |||| ||||||||||||||| | ||| |||| |||||||||||||||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaat 11223891  T
Q  134 tatgt 138  Q
    |||||    
T  11223892 tatgt 11223896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 32749754 - 32749860
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||||||||  ||||  |||||||| ||||||||||  ||||||| | ||||||||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaat 32749853  T
Q  134 tatgtga 140  Q
    |||||||    
T  32749854 tatgtga 32749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 36756275 - 36756423
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||||||  ||||||||| |||||||||||||  | ||||||||||||||| |||| |||||   |||||||| |||||||| ||||||||||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatta 36756374  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    ||| |       |||||||||||||||||||   ||||||||||| ||||    
T  36756375 tgtta-tttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtc 36756423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 34784911 - 34785017
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  ||||||||| | || ||||||||||| ||||| |||| ||||||||||||| | |||||||||| |||||| | |||||||||| |||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaat 34785010  T
Q  134 tatgtga 140  Q
    |||||||    
T  34785011 tatgtga 34785017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 36096304 - 36096410
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||| |||| | ||||||||||| ||||| |||| ||||||||||||||| |||||||||| |||||  | ||||||||||| ||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcat 36096403  T
Q  134 tatgtga 140  Q
    | |||||    
T  36096404 tttgtga 36096410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 4882626 - 4882727
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    |||||||||| || |||||| | |||||| |||| |  ||| | ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  4882626 tatgaagcatagatactcctcgaattaggtgtgttcaggtgcccgacatgtatcgtgtctgacaccgacacgacatcgacacttgtaattacactgaatt 4882725  T
Q  135 at 136  Q
    ||    
T  4882726 at 4882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 27286222 - 27286327
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    |||||||||  ||||||| || ||||||   |||||| |||||||||||||||||||||||||| ||||| ||||| ||||| | |||||||||| ||||    
T  27286222 tatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatt 27286321  T
Q  135 atgtga 140  Q
    ||||||    
T  27286322 atgtga 27286327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 18840953 - 18841024
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||| |||| ||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||| ||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 12224329 - 12224271
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacac 12224271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 28596587 - 28596517
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 44860449 - 44860347
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||||| | |||||| |||||||  |||||||||  |||||||||| ||| | |||||||| |||||| | |||||||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  135 atg 137  Q
    |||    
T  44860349 atg 44860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 12668352 - 12668456
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||| |||||| | |||||| |||||||| |||| || | ||||||| ||| | | |||||||||| |||||||| ||||||||||||||    
T  12668352 ctatgaagcacggatactcctcgaattaggtgtgtcccaatgtcagatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaat 12668451  T
Q  134 tatgt 138  Q
    |||||    
T  12668452 tatgt 12668456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 27084391 - 27084304
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacactt 118  Q
    |||||||||||||  |||||||||  ||||||||||||| | |||| ||||| ||||||||||||||| ||||| || ||||||||||    
T  27084391 aagctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatgaaatcgacactt 27084304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 42511319 - 42511386
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||||| |||||||||| ||||||| |||||||| |||||||||| |||| ||||||||||    
T  42511319 aagctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgaca 42511386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 14996171 - 14996297
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnn 145  Q
    ||||||||| ||||||||||||| || ||||| |||| |||| |||||||||||      |||| ||||||||||||||||||| |||||| |||         
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgacaa------gacaccgacacttgtaattacactaaattatatgattttt 14996263  T
Q  146 nncaaattattagttgtgtcggtttgtcagtgtc 179  Q
      ||||||||||| |||||||| |||||||||||    
T  14996264 ttcaaattattagctgtgtcggcttgtcagtgtc 14996297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 203
Target Start/End: Complemental strand, 37559096 - 37558939
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||| |||||| || |||||||||| |||||  |||||||| ||||||           ||||||||||| |||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacac-----------ttgtaattacattgaat 37559008  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    |||||||       ||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||||    
T  37559007 tatgtgattttta-caaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatag 37558939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgaca 104  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||  || ||||||||||| |||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 30728484 - 30728548
Alignment:
Q  204 cctgcaagtaattgtctacatatggtgacagtatttttggccaaaagataggtttgtatattagt 268  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||||||| || || ||||||    
T  30728484 cctgcaagaaattgtctaaatatggtgactgtatttttggccaaaagataggcttctaaattagt 30728548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 34993922 - 34993986
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||  |||||||| |||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgaca 34993986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 38117099 - 38117163
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| |||||| ||| |||||||||||||||| |||||||||| |||| ||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgaca 38117163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 28524548 - 28524450
Alignment:
Q  42 catggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| ||  ||||||||||||  | ||||| |||| |||| |||||||||| | |||| ||| |||||| | |||||||||||||||||||||    
T  28524548 catggacacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtga 28524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 19536397 - 19536459
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcgg 167  Q
    ||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcgg 19536459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 5040842 - 5040782
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||||| |||||||||||| | ||||||||  |||||||||||||| ||||||    
T  5040842 ggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 5040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 5367292 - 5367240
Alignment:
Q  53 cttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||| ||||||    
T  5367292 cttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacac 5367240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 18889514 - 18889626
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgacatcgacacttgtaattaca 127  Q
    |||| ||||||||||  |||||| ||||| ||||| ||||||  |||||||||||| ||| ||||||||||   ||| |||| |||||| | | ||||||    
T  18889514 acaaactatgaagcagagacactacttgggttaggtgtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattaca 18889613  T
Q  128 ctgaattatgtga 140  Q
    |||||||||||||    
T  18889614 ctgaattatgtga 18889626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 15972992 - 15972921
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||||| || | |||||||| ||||||| | |||||||| ||||||||||||||| ||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 18420362 - 18420469
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||||||||  |||||| || ||||||||||||||  | ||||| |||  |||| |||||||||  ||||| ||| |||||||| ||||| || ||||    
T  18420362 gctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaa 18420461  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  18420462 ttatgtga 18420469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 20473381 - 20473302
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    |||||||||||||||||||||||||||||||| |||        |||||||||||||||||||  ||||||||||| ||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagtttttt-aaattattagttgtgtcggcatgtcagtgtctgtgtc 20473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 42832234 - 42832280
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggaca 42832280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 33153489 - 33153448
Alignment:
Q  99 acgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  33153489 acgacacgacacggacacttgtaattacactgaattatgtga 33153448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 37411198 - 37411255
Alignment:
Q  48 cactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| ||| ||||||||||||||||||||||| | ||||||| ||||| ||||||    
T  37411198 cactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacac 37411255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 23058437 - 23058477
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  23058437 cgacacgacaccgacacttgtaattacactggattatgtga 23058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 15907851 - 15907910
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 93  Q
    |||||||||| |||||||| |  |||| |||||||||| |||||||| ||||||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtc 15907910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 18255945 - 18255980
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||| ||||||||||||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtcc 18255980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 18422022 - 18421987
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtga 18421987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 19980798 - 19980719
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgaca 109  Q
    |||||||||||||||| ||||| || |||||||| ||||| |  ||||||||||||||| | |||| ||  |||||||||    
T  19980798 caagctatgaagcatgaacacttctcggattaggtgtgtctcgatgtcggacatgtgtcatatccggcacagacacgaca 19980719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 29176446 - 29176493
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 94  Q
    ||||| ||||||||||| ||||| |||||||||||||||| |||||||    
T  29176446 acacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtcc 29176493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 974809 - 974771
Alignment:
Q  102 acacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtga 974771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 3444827 - 3444869
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtc 77  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgtc 3444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 17776714 - 17776612
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||||| |||||||||| ||||||||| ||||||   ||||||||   ||||||||| ||| ||||  ||||  ||||| | |||||||||||| ||||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T
Q  137 gtg 139  Q
    |||    
T  17776614 gtg 17776612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 24975255 - 24975356
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||  ||||||   |||||||||||||||||  ||| ||||| ||||  ||||||||| |||| | | || |||||||||||    
T  24975255 ctatgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaat 24975353  T
Q  134 tat 136  Q
    |||    
T  24975354 tat 24975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 2438725 - 2438754
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  2438725 cgacacttgtaattacactgaattatgtga 2438754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 27460148 - 27460111
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgt 76  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  27460148 aagcatggacactccttggattagacgtgtcccggtgt 27460111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 30404856 - 30404885
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  30404856 cgacacttgtaattacactgaattatgtga 30404885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 34337152 - 34337201
Alignment:
Q  76 tcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaatta 125  Q
    ||||||| |||| |||||||||| ||||| |||| |||||||||||||||    
T  34337152 tcggacacgtgttgtgtccgacaccgacaggacaccgacacttgtaatta 34337201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 3414926 - 3414986
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    |||||||||||||| |||||  || ||||||||||||||| |||||| | | |||||||||    
T  3414926 agctatgaagcatgaacacttattagattaggcgtgtcccggtgtcgtatacgtgtcgtgt 3414986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 18631351 - 18631399
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||  |||||||||| | |||||||||||||||||||| ||||    
T  18631351 ctatgaagctcggacactcctcgcattaggcgtgtcccagtgtctgaca 18631399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 21624326 - 21624294
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatg 137  Q
    ||||| |||||||||||||||||||||||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 30404813 - 30404853
Alignment:
Q  57 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgac 97  Q
    |||||||| |||||  |||||||||||||||||||||||||    
T  30404813 gattaggcatgtcctggtgtcggacatgtgtcgtgtccgac 30404853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 44635573 - 44635522
Alignment:
Q  84 gtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||| ||||||     ||||||||||||||||||||||||| ||||    
T  44635573 gtgtcgtgtccgacaccgacac-----cgacacttgtaattacactgaattacgtga 44635522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 6e-38; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 8365443 - 8365592
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacac 128  Q
    |||| |||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||    
T  8365443 acaacctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacac 8365542  T
Q  129 tgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
     |||||||||||       ||||||||||||||||||||  ||||||||||    
T  8365543 cgaattatgtga-tattttcaaattattagttgtgtcggcgtgtcagtgtc 8365592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 16766828 - 16766677
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| ||||| || | |||||||||||||||| |||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  16766828 gctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 16766729  T
Q  133 ttatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    ||||||||       ||||||||||| ||||||||  |||||||||| |||||    
T  16766728 ttatgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 16766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 31385048 - 31384944
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||| || || ||||||||  |||||||||||||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaac-actacacgacactgacacttgtaattacactgaatt 31384950  T
Q  135 atgtga 140  Q
    ||||||    
T  31384949 atgtga 31384944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 10339054 - 10339161
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaatt-acactgaa 132  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| | ||||| ||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaa 10339153  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  10339154 ttatgtga 10339161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 18367971 - 18367860
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacac 128  Q
    |||| |||||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| |||||||||| |||||| | |||||||||    
T  18367971 acaacctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacac 18367872  T
Q  129 tgaattatgtga 140  Q
    || ||| |||||    
T  18367871 tgcattttgtga 18367860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 5970037 - 5970143
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||| | ||||||| ||||| ||||||||||  ||||||| ||||||||||||||||| |||||||||| | ||| |||||||||||||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 5970136  T
Q  134 tatgtga 140  Q
    |||||||    
T  5970137 tatgtga 5970143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 8714110 - 8714004
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  ||||||||| ||||| ||||||||||  ||||||| ||||||||||||||||| |||||||||| | ||| |||||||||||||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 8714011  T
Q  134 tatgtga 140  Q
    |||||||    
T  8714010 tatgtga 8714004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 9107299 - 9107405
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| || ||||||| |||||||| ||||||| ||||||||||   || |||||||||| |||||||||| |||||||||||||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  134 tatgtga 140  Q
    | |||||    
T  9107399 tttgtga 9107405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 9523021 - 9522915
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||||||  ||  |||||||||||||||| | |||||||||| ||||||  ||||||| |||||| ||| |||||||||||||||||||||||    
T  9523021 ctatgaagcatggatgctatttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaat 9522922  T
Q  134 tatgtga 140  Q
    |||||||    
T  9522921 tatgtga 9522915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 9629513 - 9629407
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgaca-cgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||  ||| ||||||||| |||||| ||||| |||||| | |||||||| ||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgac-acgacaccgacaccgacacatataattacattgaa 9629415  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  9629414 ttatgtga 9629407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 16488519 - 16488625
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | ||| ||||||||| ||||||||||| ||| | |||| ||||||||||||||| |||||||||| |||||| | ||||||||||| ||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcat 16488618  T
Q  134 tatgtga 140  Q
    | |||||    
T  16488619 tttgtga 16488625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 4878061 - 4877991
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcct-gtgtcggacatgtgtcgtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 17435331 - 17435225
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||| | |||||||  |  |||||| ||||||||||||||| ||| ||||||||||||||| |||||  |||   |||||||||||||||||||    
T  17435331 agctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactga 17435232  T
Q  132 attatgt 138  Q
    |||||||    
T  17435231 attatgt 17435225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 17327590 - 17327654
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| |||||||||| |||||||||||||||| ||||| |||| |||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgaca 17327654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 17841530 - 17841686
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||  |||||||||           ||||| || |||||||||||||||| ||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtc-----------cgacaccgtcacttgtaattacactaaatt 17841618  T
Q  135 atgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    ||||||       ||||||||||| ||||||||  ||||||||||  |||| ||||| |||||||||||    
T  17841619 atgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatcagtgcttcatag 17841686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 26562777 - 26562713
Alignment:
Q  76 tcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| | |||||||||||||||||||||    
T  26562777 tcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtga 26562713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 28152217 - 28152062
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | |||||||| ||||||||| |||||| |||||||||| |||||||||||           |||| |||||||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtcc-----------gacaccgacacttgtaattacactgaat 28152129  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcata 202  Q
    |||||||       ||||||||||| | ||||||  ||||||||||  ||||  |||||||||||||||    
T  28152128 tatgtga--tttttcaaattattagctttgtcggcgtgtcagtgtccgtgtccatatccgtgcttcata 28152062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 10770605 - 10770753
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca--tgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacact 129  Q
    |||||||||||| ||||||||||  |||||||| |||||| |  |||||||  ||||||||||| ||||      ||||| |||||||||||||||||||    
T  10770605 agctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgaca------cgacaccgacacttgtaattacact 10770698  T
Q  130 gaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    |||||||||||       ||||||||||||||||| ||  |||||||||| |||||    
T  10770699 gaattatgtga-ttttttcaaattattagttgtgttggcgtgtcagtgtccatgtc 10770753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 12696446 - 12696350
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||||||  |||||||||||||| ||| ||||||| ||||| |||| |||||||||||      |||||||||  ||||||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtcc------gacacgacactgacacttgtaattacactgaatta 12696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 34595253 - 34595182
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| |||||||| ||||||| ||||| |||| ||||||||||||||| ||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacac 34595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 7248488 - 7248382
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| ||||| | |||||||| ||||||||||  ||| |||||| ||| |||||||||  | |||| | ||||||| ||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 7248389  T
Q  134 tatgtga 140  Q
    |||||||    
T  7248388 tatgtga 7248382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 17302689 - 17302518
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    ||||||||| || ||||| || |||||||||| |||| ||  ||||||||| |||| |||||  | |  |||||||||  |||||||||||||||| |||    
T  17302689 agctatgaaacacggacattctttggattaggtgtgttccgatgtcggacacgtgttgtgtctaatactgacacgacaatgacacttgtaattacattga 17302590  T
Q  132 attatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    |||||||||       |||||||||||||||||| |  |||||||||   |||| ||||| | |||||||||    
T  17302589 attatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtccgtatctgcgcttcatag 17302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 167
Target Start/End: Complemental strand, 3209518 - 3209379
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca-----acgaca-cgacatcgacacttgtaattaca 127  Q
    ||||||||||   |||||||| |||||||||||||||  |||||||||  ||||||||| |||||     |||||| ||||| ||||||||||||| |||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacaccgacacttgtaataaca 3209419  T
Q  128 ctgaattatgtgannnnnnncaaattattagttgtgtcgg 167  Q
    || ||||||||||       ||||||||||| ||||||||    
T  3209418 ctaaattatgtgatttttttcaaattattagctgtgtcgg 3209379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 9911524 - 9911563
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtga 9911563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 10294237 - 10294134
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  |||||||||  ||||||  |||||| ||| |||||||  |||||||||||||| | |||||||| |||||| | |||||||| ||||     
T  10294237 ctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaa 10294138  T
Q  134 tatg 137  Q
    ||||    
T  10294137 tatg 10294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 28715414 - 28715343
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| | ||||| || | |||||||||||||| |||||| ||| ||||||||||||||| ||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 34446690 - 34446647
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtc 77  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  34446690 ctatgaagcacggacactccttggattaggtgtgtcccagtgtc 34446647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 5732472 - 5732510
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5732472 agctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 7977767 - 7977841
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||| | ||||||||| ||||||||||||  |  |||||||||| ||| |||||||||| ||||||    
T  7977767 aagctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacac 7977841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 21044826 - 21044872
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||    
T  21044826 gacactccttagattaggcgtgtcccagtgtcggacacatgtcgtgt 21044872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 13360313 - 13360362
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacat 83  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat 13360362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 21395292 - 21395341
Alignment:
Q  89 gtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 9027290 - 9027238
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||||   |||||||||||||||| |||||||| ||||||||||    
T  9027290 caagctatgaagcacaaacactccttggattagccgtgtcccggtgtcggaca 9027238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 21068084 - 21068120
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21068084 gacactccttagattaggcgtgtcccagtgtcggaca 21068120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 9658998 - 9658939
Alignment:
Q  35 tatgaagcatggacactccttgga-ttaggcgtgtcccagtgtcggacatgtgtcgtgtc 93  Q
    ||||||||| |||||||||||||| |||||||||| || ||||| |||| ||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtc 9658939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 34073278 - 34073379
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| | |||||  ||||||| ||||||| ||  ||||||||  |||| |||||||||| |||| | | ||||||||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaat 34073375  T
Q  134 tatg 137  Q
    ||||    
T  34073376 tatg 34073379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 7938221 - 7938171
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||||| |||||||||| |||| ||||||||| | ||||||||||    
T  7938221 agctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggaca 7938171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 8931561 - 8931635
Alignment:
Q  64 cgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    |||||| | |||| ||| ||||||||  || |||| ||||||||||||||||| | |||||| ||||||||||||    
T  8931561 cgtgtctccgtgttggatatgtgtcgcatctgacaccgacacgacatcgacacatataattatactgaattatgt 8931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Original strand, 1191702 - 1191735
Alignment:
Q  107 acatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||||||||||||||||| |||||    
T  1191702 acatcgacacttgtaattacactgaattttgtga 1191735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 5000557 - 5000630
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgaca 109  Q
    |||||||| | |||||| | ||||||| |||||||  |||||||| |||||||||||| |||| ||||| ||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgaca 5000630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 7265535 - 7265604
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| |||| ||||| ||||||||| | | || ||||||||||||| | |||||||||| ||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacac 7265604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 7977830 - 7977863
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||| ||||||||||||||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgt 7977863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 9025448 - 9025493
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||| ||||||| || |||||||||||||||| ||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggaca 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 12627539 - 12627588
Alignment:
Q  56 ggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| ||||| | ||||||||||||||| |||||||||| ||||||    
T  12627539 ggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacac 12627588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 12868609 - 12868691
Alignment:
Q  27 ctacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatg----tgtcgtgtccgacaacgacac 105  Q
    |||||| ||||||||||  ||||||  | ||||||||||||| || ||||||||||||    |||||||||||||| ||||||    
T  12868609 ctacaacctatgaagcaccgacacttatcggattaggcgtgttcccgtgtcggacatgtgcatgtcgtgtccgacaccgacac 12868691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 25038039 - 25038104
Alignment:
Q  73 gtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    |||||||||| |||||||||| |||| | |||| | | ||||| ||||||||||||| ||||||||    
T  25038039 gtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgt 25038104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 7625235 - 7625187
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| | ||||||||||||||| |||||| || ||||||||||    
T  7625235 ctatgaagcacgaacactccttggattaagcgtgttccggtgtcggaca 7625187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 7723197 - 7723233
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgt 68  Q
    |||||||||||| |||||||||| |||||||||||||    
T  7723197 agctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 7996325 - 7996377
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcg 89  Q
    ||||||| ||| ||||||||||||||||||||||| ||||  |||| ||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg 7996377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 8022476 - 8022424
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcg 89  Q
    ||||||| ||| ||||||||||||||||||||||| ||||  |||| ||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg 8022424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 9911482 - 9911518
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||||| |||||||| |||||||||||||||    
T  9911482 ctatgaagcatgaacactcctcggattaggcgtgtcc 9911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 34290024 - 34290072
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||||||||| ||| ||||| |||||| | ||||||||||    
T  34290024 ctatgaagcatggacactctttgaattagacgtgtctcggtgtcggaca 34290072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 9e-37; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 47989627 - 47989521
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| ||||||||||||||||  |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  134 tatgtga 140  Q
    |||||||    
T  47989527 tatgtga 47989521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 5944413 - 5944307
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | |||||||| ||||||||||| |||| ||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  134 tatgtga 140  Q
    |||||||    
T  5944313 tatgtga 5944307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 6612112 - 6612204
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    |||||||||||||||||||||||||  ||||||||||  | |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgt 6612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 32461392 - 32461498
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||| | ||||||||||||||| | ||    
T  32461392 gctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaa 32461490  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  32461491 ttatgtga 32461498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 31694639 - 31694745
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||  |||||||||||| || |||||| | |||||| |||||||||| |||||||||| ||||||||||||||| |||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 31694738  T
Q  134 tatgtga 140  Q
    |||||||    
T  31694739 tatgtga 31694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 40917879 - 40917779
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||| |||| |||||||||||||||| |||||||||| ||||||||||| ||| |||||||||| ||| ||||||||||||||| |||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat 40917780  T
Q  134 t 134  Q
    |    
T  40917779 t 40917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 6427594 - 6427425
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||| |  ||||||||||||||| |||||||||| ||||||||||||||  | ||||||||  |||||||||| ||||| |||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaat 6427495  T
Q  134 tatgtga--nnnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcata 202  Q
    |||||||         ||||||||||||||||||||  ||||||||||  |||| |||||| |||||||||    
T  6427494 tatgtgatttttttttcaaattattagttgtgtcggcatgtcagtgtc-gtgtccgtatccatgcttcata 6427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 9828174 - 9828068
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| ||||||| |||||||| |||||||||| |||||||||| ||||  ||||||||| |||||| |  |||||||||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaat 9828075  T
Q  134 tatgtga 140  Q
    |||||||    
T  9828074 tatgtga 9828068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 18556385 - 18556548
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||| | |||||| ||| |||| || ||||||| | | ||||||||||||| | |||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgctt 198  Q
    |||||||       ||||||||||| ||||||||  ||||||||||  |||| ||||||||||||    
T  18556485 tatgtga-tattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgctt 18556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 9629834 - 9629931
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||| ||||||| ||||||  || |||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  9629834 aagcacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattat 9629931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 25934746 - 25934640
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||||||| |||||| |||| ||||| |||| ||||||||||||||| |||||||| | |||||| | ||||||||||| ||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtat 25934647  T
Q  134 tatgtga 140  Q
    | |||||    
T  25934646 tttgtga 25934640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 1486646 - 1486744
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||||||  ||||||||| |||||||||||||||| |||||||||| ||||||||||      |||||||||| |||||||| ||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc------cgacacgacaccgacacttataattacactgaatta 1486739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 30173691 - 30173795
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||| | || | || |||||||||||| || |||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||| |    
T  30173691 ctatgaagcacggatattcgtcgggttaggcgtgtcctagagtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagt 30173790  T
Q  134 tatgt 138  Q
    |||||    
T  30173791 tatgt 30173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 37598950 - 37598879
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 22515827 - 22515898
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| |||||||||||||| | |||||||| ||||||||||||||||| ||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 40258874 - 40258944
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||| |||| ||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacac 40258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 18337450 - 18337377
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||| |||||||||| |||| |||| ||||||||||||||||| |||| |||||||||| ||||||    
T  18337450 agctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 25362013 - 25361910
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| |||||||| | ||||||||  ||| || |||||||||||||  ||||||||||| ||||||||||  ||||| | |||||||||||||    
T  25362013 gctatgaagcacggacactcttcggattagg--tgttccggtgtcggacatgt--cgtgtccgacaccgacacgacactgacacatataattacactgaa 25361918  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  25361917 ttatgtga 25361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 21032335 - 21032245
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaatta 125  Q
    |||||||||  ||||||||||||||||||||| || |  |||||||||  |||||||||||||| | |||||||| ||||| |||||||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaatta 21032245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 17778670 - 17778580
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactg 130  Q
    |||||||| | ||||| || ||||||||| |||||| |||||||||| ||||||    ||||| |||||||||| ||||||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg----cgacaccgacacgacaccgacacttgtaattacactg 17778580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 44482311 - 44482254
Alignment:
Q  83 tgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||||| |||||||||| |||||| | |||||||||||||||||||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtga 44482254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 1704935 - 1704983
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  1704935 ctatgaagcatggacactccttggattaggcgtgtctcggtgtcggaca 1704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 46348323 - 46348479
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||| ||| |||| ||||||||| | |||||||||| ||||||||||           ||||| ||||||||||||||||||| |||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtaattacactaaat 46348411  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcata 202  Q
    ||| |||       ||||||||||| ||||||||  ||||||||||  |||| ||||||||||||||||    
T  46348412 tatatga-ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcata 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 1815376 - 1815305
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| || || |||||||  ||||||||||||||| ||||||||||||||||||||| |||| ||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacac 1815305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 51410144 - 51410073
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| | | ||||||||||||||||||||| | |||||||| | ||||||||||||||| ||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacac 51410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 5376483 - 5376533
Alignment:
Q  88 cgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgt 5376533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 6574096 - 6574051
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcgg 79  Q
    |||||||||| || ||||||||||||||||||||||||||||||||    
T  6574096 ctatgaagcacggtcactccttggattaggcgtgtcccagtgtcgg 6574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 17831462 - 17831566
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||| |||||||||||||  ||||||||||||||| ||||||||||  |||| ||||||||||  |||||||   |||||| | | |||||||||||    
T  17831462 ctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacga---cgacacatatgattacactgaa 17831558  T
Q  133 ttatgtga 140  Q
    | ||||||    
T  17831559 taatgtga 17831566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 27965938 - 27965983
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtc 77  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||    
T  27965938 agctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 42359391 - 42359460
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||   ||| ||||||||| ||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacac 42359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 10577676 - 10577736
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccg 95  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||| |||| | ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccg 10577736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 27471524 - 27471600
Alignment:
Q  63 gcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtg 139  Q
    ||||||||| |||||||||| ||||||| ||| ||| ||| | |||| | |||| ||||||||||||||||||||||    
T  27471524 gcgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtg 27471600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 28273067 - 28273119
Alignment:
Q  84 gtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||||||||||||| ||| | |||| ||||||||||||||||||||||||||    
T  28273067 gtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattat 28273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 36878589 - 36878541
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcg 78  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  36878589 caagctatgaagcacggacactcctgggattaggcgtgtccccgtgtcg 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 24577182 - 24577221
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtga 24577221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 38078601 - 38078672
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| | | |||||| |||||||||||||||  |||| | ||||||||||||||||||| ||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacac 38078672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 39130711 - 39130778
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||| |||||||| |||||||||| |||||  || |||| |||||||||| ||||||    
T  39130711 gaagcatggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacac 39130778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 2896061 - 2896131
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgaca 104  Q
    ||||||| |||||||||| ||||||||||| ||||||| || |||||||  ||||||||| |||| |||||    
T  2896061 ctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgaca 2896131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 15449166 - 15449267
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacact 129  Q
    ||||||||||||||  ||||||||||||||||||| |||| | |||||          ||||||||||| ||| ||||||  ||||||||||||||||||    
T  15449166 caagctatgaagcacagacactccttggattaggcatgtctcggtgtca---------cgtgtccgacaccgatacgacacagacacttgtaattacact 15449256  T
Q  130 gaattatgtga 140  Q
     ||||||||||    
T  15449257 aaattatgtga 15449267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 16297223 - 16297285
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||| |||||||||| |||||||||||||||  ||||||||||   |||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgaca 16297285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 34371799 - 34371737
Alignment:
Q  78 ggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||| ||||||| | |||||||| |||||| | |||||||||||||||||||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtga 34371737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 34712323 - 34712377
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc 88  Q
    |||||||||| |||||||||||| ||||| ||||||||||||| ||||| |||||    
T  34712323 ctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtc 34712377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 36906126 - 36906021
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||| ||| |||||| ||||||||||||| |||  | |||||||||||||  ||||| ||  | |||| | ||||||| ||||||    
T  36906126 ctatgaagcacggacactc-ttgcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacacaacgccaacacatataattactctgaat 36906028  T
Q  134 tatgtga 140  Q
    |||||||    
T  36906027 tatgtga 36906021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 113364 - 113323
Alignment:
Q  99 acgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  113364 acgacacgacacctacacttgtaattacactgaattatgtga 113323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 21530778 - 21530737
Alignment:
Q  64 cgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| ||||||||||||||||||||||||||| ||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacac 21530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 41597409 - 41597474
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||||  |||||||||||||| | |||| |||| ||||| |||| |||||||||||||||    
T  41597409 gctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgaca 41597474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 113412 - 113364
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||| ||||||| |||||||||||||||| |||| |||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggaca 113364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 1704988 - 1705065
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    ||||||||| |||||||||||||||| |||||||||||||       ||||||||||| ||||||||| |||| |||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtga-ttttttcaaattattagatgtgtcggtgtgtcggtgtc 1705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 2218347 - 2218299
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| ||||||||||  |||||||||||||| |||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggaca 2218299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 15765877 - 15765829
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| |||||||| | |||||||||||||||||||||| ||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagaca 15765829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 18190109 - 18190141
Alignment:
Q  106 gacatcgacacttgtaattacactgaattatgt 138  Q
    |||||||||||||||||||||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgt 18190141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 31015140 - 31015092
Alignment:
Q  50 ctccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||||||    
T  31015140 ctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgaca 31015092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 38503437 - 38503352
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||| ||| |||||||| ||||||| | ||| |||||||||| ||||||||  ||||| |||| |||||| | |||||||||||||    
T  38503437 ggacacacctcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgac--cgacaggacaccgacacatataattacactgaa 38503352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 48415667 - 48415702
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||| ||||||||||||||||||||||||||    
T  48415667 tatgaagcacggacactccttggattaggcgtgtcc 48415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 2218302 - 2218264
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgtg 139  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 6332732 - 6332694
Alignment:
Q  102 acacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtga 6332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21365992 - 21366038
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcgga 80  Q
    |||||||||| |||||||||| |||||||||||||| | ||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 35702542 - 35702580
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtccca 72  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtccca 35702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 40181976 - 40181926
Alignment:
Q  48 cactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||| |||||||||||||||| |||| ||||| |||| ||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgaca 40181926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 48040412 - 48040462
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||| |||||| ||||||||||   |||||||||||||||||||||||||    
T  48040412 agctacgaagcacggacactcctccaattaggcgtgtcccagtgtcggaca 48040462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 6414932 - 6415036
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||||| |||| |   ||||| | ||||| |||| ||||||||||||||| ||| | |||| |||||| | |||||| |||| |||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatt 6415030  T
Q  135 atgtga 140  Q
    ||||||    
T  6415031 atgtga 6415036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 16164257 - 16164350
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||| | |||||||||||||||  |||||||||| |||| | |||| ||| | ||||||||  ||||| | |||||||| | ||||||||||    
T  16164257 acactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtga 16164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 19058856 - 19058889
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||| ||||||||||||||||||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 31015096 - 31015067
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  31015096 cgacacttgtaattacactgaattatgtga 31015067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 34741965 - 34741901
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatg-tgtcgtgtccgaca 98  Q
    |||||||||| |||||||| | |||||||||||||||| |||||||||| | ||||||||| ||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagaca 34741901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 40258939 - 40258968
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  40258939 cgacacttgtaattacactgaattatgtga 40258968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 43492456 - 43492505
Alignment:
Q  56 ggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||| || ||||||||||||||| ||||| |||| ||||||    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacac 43492505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 351029 - 351073
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcg 89  Q
    ||||||||||||||||||||||||||| |||| | ||||| ||||    
T  351029 ggacactccttggattaggcgtgtcccggtgttgaacatgcgtcg 351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 13011223 - 13011288
Alignment:
Q  113 acacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgt 178  Q
    ||||||||||||||||| ||||||||||       ||||||||||| ||||||||  |||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgt 13011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 19637872 - 19637816
Alignment:
Q  49 actccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||| |||||||| | ||||| |||||||| |||| |||||||||||| ||||||    
T  19637872 actcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgacac 19637816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 22947849 - 22947813
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||| |||||||||| |||||||||||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtcc 22947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 24334705 - 24334737
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatg 137  Q
    ||||| |||||||||||||||||||||||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 29144320 - 29144368
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| |||||||| | ||||||||||||| || ||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggaca 29144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 35919271 - 35919311
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  35919271 cgacacgacacggacacttataattacactgaattatgtga 35919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 46940748 - 46940796
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| | |||||||| ||||||||||||| || ||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 48147980 - 48148068
Alignment:
Q  48 cactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||| || ||||||||||||||| |||||  ||||  ||||||| ||| | | |||||||| |||||  | |||||||||||||||||    
T  48147980 cactctttagattaggcgtgtcccggtgtcatacatacgtcgtgttcgatatcaacacgacaccgacatatataattacactgaattat 48148068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 24339777 - 24339666
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacac 128  Q
    |||| |||||||||| || ||||||| |||||||||||||||| |||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24339777 acaatctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacac 24339678  T
Q  129 tgaattatgtga 140  Q
    ||||||||||||    
T  24339677 tgaattatgtga 24339666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 2334379 - 2334274
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||| || |||||||||| ||||||| |||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgac-acgacacgacaccgacacttgtaattacactaaat 2334281  T
Q  134 tatgtga 140  Q
    |||||||    
T  2334280 tatgtga 2334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 7438836 - 7438730
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||  |||| ||||| |||| ||||||||||||||||| |||||    
T  7438836 ctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaat 7438737  T
Q  134 tatgtga 140  Q
    |||||||    
T  7438736 tatgtga 7438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 5409771 - 5409871
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||      |||||||||| |||||||||||||| ||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc------cgacacgacaccgacacttgtaattgcactgaat 5409864  T
Q  134 tatgtga 140  Q
    |||||||    
T  5409865 tatgtga 5409871  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 9778624 - 9778524
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||      |||||||||| ||||||||||||||| |||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtc------cgacacgacaccgacacttgtaattatactgaat 9778531  T
Q  134 tatgtga 140  Q
    |||||||    
T  9778530 tatgtga 9778524  T

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Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 203
Target Start/End: Complemental strand, 32308249 - 32308082
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||||| |||||||| |||||||  ||||| | |||||||||||||||||||||| ||| ||||||||||  ||||| |  ||||||||||||||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaatt 32308150  T
Q  135 atgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    ||||||       |||||||||||  |||||||  |||||||||| ||||  ||||  |||||||||||    
T  32308149 atgtga-ttttctcaaattattagcggtgtcggcgtgtcagtgtccatgttcgtatttgtgcttcatag 32308082  T

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Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 25822785 - 25822685
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||| || ||||||||||| |||||||| ||||||  |||| |||| ||||||||||||| | ||| |||||| |||||||||||||||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaat 25822686  T
Q  134 t 134  Q
    |    
T  25822685 t 25822685  T

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Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 26033392 - 26033496
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||| || |||||||||| |||||||| ||||| | || ||||||| ||||| |||| |||| |||||||| | |||||||||||||||||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  136 tgtga 140  Q
    |||||    
T  26033492 tgtga 26033496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 7058551 - 7058455
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||| ||| |||||||||||||||||||||||  || |||||||||||||| |||||||  | |||||||||| | |||||||||||||||||||||||    
T  7058551 tgaaccatagacactccttggattaggcgtgtgtcaatgtcggacatgtgttgtgtccg--atcgacacgacaccaacacttgtaattacactgaatta 7058455  T

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Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 32093954 - 32094079
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgt-cccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||||||| | |||||||| ||||||||||||| ||| |||||||||| ||||||||||      |||||||||| ||||| ||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtc------cgacacgacaccgacatttgtaattacactgaa 32094047  T
Q  133 ttatgtgannnnnnncaaattattagttgtgt 164  Q
    ||||||||       |||||||||||||||||    
T  32094048 ttatgtgatttttttcaaattattagttgtgt 32094079  T

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Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 43027403 - 43027504
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| |||||||| | |||||||||||||||| |||||||||| ||||||||||       ||||||||| ||||||||||| |||||||| |    
T  43027403 gctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc------tgacacgacaccgacacttgtatttacactgca 43027496  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  43027497 ttatgtga 43027504  T

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Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 21880271 - 21880200
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||||||| || |||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 9408265 - 9408408
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| ||||| || | |||||||||||||    |||||||| || | ||||||| |||| ||| |||||| ||||||||||||||||||| |||||    
T  9408265 atgaagcacggacattcttcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaatta 9408364  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtct 180  Q
    |||||       |||||||||| |||||||||| |||||||||||    
T  9408365 tgtga-ttttttcaaattattaattgtgtcggtgtgtcagtgtct 9408408  T

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Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 27229244 - 27229346
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatg 137  Q
    |||||||||||| |||| | ||||||||||||| ||||||| ||| || ||||||| ||||  ||||||||| ||| |||| |||||||||| |||||||    
T  27229244 gaagcatggacattcctcgaattaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatg 27229343  T
Q  138 tga 140  Q
    |||    
T  27229344 tga 27229346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 11665370 - 11665475
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| ||||| |||| | |||||  ||||  | |||||||||| ||||||||| ||||| ||||| ||||||||||||| |||||| ||||||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatt 11665469  T
Q  135 atgtga 140  Q
    ||||||    
T  11665470 atgtga 11665475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 41415008 - 41414911
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacact 129  Q
    ||||||||| ||||||||||| ||| |||||||||| |||  ||||||| |||| | |||| ||||| ||| |||||| |||||||||||||||||||    
T  41415008 agctatgaaacatggacactctttgaattaggcgtgccccgttgtcggatatgtatagtgtacgacatcgatacgacaccgacacttgtaattacact 41414911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 598328 - 598256
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||| ||||||| || |||||||||||||||| |||||||||| |||||||||| |||| ||||||    
T  598328 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 13770810 - 13770717
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||| |||||||| | ||||||||||||| || |||||||||| |||| ||||||||||      ||||| ||||||||||||||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgaca------cgacaacgacacttgtaattacactgaattatgt 13770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 20549909 - 20549839
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||| || ||||||| |||||||||||||| || |||||||||||||| |||||||||| ||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacac 20549839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 21930758 - 21930656
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||||||| ||| | |||||||| |||| || | |||||||| || | |||||| |||  ||||||||||||||||||||||||| | |||||    
T  21930758 ctatgaagcatggactctcttcggattaggtgtgttccggcgtcggacacgtcttgtgtccaacactgacacgacatcgacacttgtaattaaaatgaat 21930659  T
Q  134 tat 136  Q
    |||    
T  21930658 tat 21930656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 11272569 - 11272617
Alignment:
Q  88 cgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 21864928 - 21864856
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||  ||||||||| | ||||| |||||||| |||||||||| ||||||||||||||| ||||||    
T  21864928 gctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacac 21864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 6630854 - 6630986
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnnn 146  Q
    ||||||||  ||||||| |||||   ||||||| || |||| |||||||||| | ||||||||||||||| | |||||||||||||||| ||||          
T  6630854 acactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtga-ctttc 6630952  T
Q  147 ncaaattattagttgtgtcggtttgtcagtgtct 180  Q
     |||||||||||| |||||||  |||||||||||    
T  6630953 tcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 15680928 - 15680857
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| | ||||| |||||| | |||||||||| ||||||||||||||| ||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 21560610 - 21560527
Alignment:
Q  57 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||  | ||||  ||||||| ||||||  |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  21560610 gattaggcgtgtttcggtgttagacatgtatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtga 21560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 33994331 - 33994260
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| || | ||||||||||||||||||||||| | |||| |||||||||||||||| |||| ||||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacac 33994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 6028732 - 6028651
Alignment:
Q  57 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||||||| |||||||| ||  ||||||||| |||||  ||||||||| ||||| ||||||||||| | ||||||||    
T  6028732 gattaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgt 6028651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 8234245 - 8234201
Alignment:
Q  54 ttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  8234245 ttggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgaca 8234201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 18039063 - 18039023
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  18039063 cgacacgacaccgacacttgtaattacactgaattatgtga 18039023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 29763127 - 29763187
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    |||||||||||| |||||||||| |||||||||||||||   ||||||||| |||||||||    
T  29763127 agctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 4795018 - 4794915
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    |||||||||  |||||| |||||||||| |||||    ||||| || | ||||||||||||||| ||| |||  | |||||||| |||||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaatt 4794919  T
Q  135 atgt 138  Q
    ||||    
T  4794918 atgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 1433584 - 1433514
Alignment:
Q  28 tacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||| ||||||||||| |||||||||| ||||||| |||||||  ||||||||||  |||| |||||||||    
T  1433584 tacatgctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgaca 1433514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 11831562 - 11831460
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||||| ||| | |||||||||||||||  || |||||  |||  |||||||||||||| ||| ||||||   | ||||||||||||||| |||    
T  11831562 ctatgaagcatgaacagttcttggattaggcgtgctccggtgtcaaacacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaat 11831463  T
Q  134 tat 136  Q
    |||    
T  11831462 tat 11831460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 15902928 - 15902846
Alignment:
Q  58 attaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||| ||||||||  || |||| |||||||||||||||| | |||||| ||| |||||| | |||||||||| ||||||||||    
T  15902928 attaagcgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtga 15902846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc 88  Q
    |||||| |||||||||| ||||||||| |||||| ||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 5307375 - 5307326
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacat 83  Q
    |||||||||| | |||||||||||||||||||||||| ||||||| ||||    
T  5307375 ctatgaagcacgtacactccttggattaggcgtgtcctagtgtcgcacat 5307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcg 78  Q
    ||||||| ||||||||||||||||||||||||||| ||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 10043051 - 10043002
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccg 95  Q
    |||| |||||||||||| |||||||| |||||||||||||||||| ||||    
T  10043051 gacattccttggattagacgtgtcccggtgtcggacatgtgtcgtatccg 10043002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 22801697 - 22801774
Alignment:
Q  61 aggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||||||||||| |||| |||| ||||| ||||  ||||  ||| |||||||||| |||||| ||||||||||    
T  22801697 aggcgtgtcccagtgtccgacaagtgtggtgtcagacactgacaatacaccgacacttgtgattacagtgaattatgt 22801774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 27945104 - 27945067
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgt 27945067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 7133212 - 7133284
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacac 105  Q
    |||||||||| |||| |||||  ||||||| |||||||||||||||||| | ||| |||||||||| ||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacac 7133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 18212972 - 18213044
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||  ||||||||| |||| ||||||||||| ||||| || | | ||||||||||||| ||||||    
T  18212972 gctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacac 18213044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 40131935 - 40131987
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||||  ||||||||| ||||||| |||||||| ||||||||||    
T  40131935 caagctatgaagcacagacactcctcggattagacgtgtccctgtgtcggaca 40131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 1401142 - 1401091
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgt 85  Q
    |||||||||||||||||||||  ||||||| |||||||  ||||||||||||    
T  1401142 ctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggacatgt 1401091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 20545185 - 20545248
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||  ||||||||| | ||||  |||||||| |||||||||||||||||||| |||||    
T  20545185 tatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgtacgaca 20545248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 26733411 - 26733352
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||| ||| ||||||||||||| || || ||||||||| ||||||||||||| ||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacac 26733352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 3991384 - 3991321
Alignment:
Q  104 acgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggt 168  Q
    |||||| ||||||||||||||| ||||||||||||||       |||||||||||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtga-ttttttcaaattattagttgtgtcggt 3991321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 21139057 - 21139091
Alignment:
Q  170 tgtcagtgtctatgtctgtatccgtgcttcatagc 204  Q
    ||||||||||| |||||||||||||||||||||||    
T  21139057 tgtcagtgtctgtgtctgtatccgtgcttcatagc 21139091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 26329354 - 26329416
Alignment:
Q  77 cggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtg 139  Q
    |||||| |||||||||| |||| |||||||||  |||||| | ||||||||||||||| ||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtg 26329416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 3991433 - 3991392
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagt 74  Q
    ||||||||||  |||||||||| |||||||||||||||||||    
T  3991433 gctatgaagcccggacactcctcggattaggcgtgtcccagt 3991392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 7197340 - 7197397
Alignment:
Q  149 aaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatagcct 206  Q
    |||||||||| ||||||||  ||||| ||||| |||  ||||||||||||||||||||    
T  7197340 aaattattagctgtgtcggcgtgtcaatgtctgtgttcgtatccgtgcttcatagcct 7197397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 15836439 - 15836488
Alignment:
Q  49 actccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||| ||||||||||||||  ||| |||| |||||||||||||||||    
T  15836439 actccttagattaggcgtgtcctggtgccggatatgtgtcgtgtccgaca 15836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 28155674 - 28155637
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  28155674 gctatgaagcacggacattccttggattaggcgtgtcc 28155637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 43250118 - 43250019
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgaca-cgacatcgacacttgtaattacactgaattat 136  Q
    ||||| |||||||||| | |||||||||||||  |||||||||| | ||| |||||||||  ||||| ||||| |||||||| ||||||||||| |||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgac-gcgacaccgaca-cgacacttataattacactgtattat 43250021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 48246773 - 48246806
Alignment:
Q  65 gtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||| |||||||||||||||||||||||||    
T  48246773 gtgtcccaatgtcggacatgtgtcgtgtccgaca 48246806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 9933364 - 9933328
Alignment:
Q  73 gtgtcggacatgtgtcgtgtccgacaacgacacgaca 109  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  9933364 gtgtcagacatgtgtcgtgtccgacaccgacacgaca 9933328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 22602705 - 22602745
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| |||||| | |||||||||||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtga 22602745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 22868164 - 22868108
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    ||||||||||||||||||| |||||| | ||||||| ||||| |||| |||| ||||    
T  22868164 atgaagcatggacactcctcggattatgtgtgtcccggtgtctgacacgtgttgtgt 22868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 29812595 - 29812635
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtccc 71  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  29812595 aagctatgaagcacggacacttctcggattaggcgtgtccc 29812635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 30813918 - 30813882
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgt 68  Q
    |||||||||||| |||||||||| |||||||||||||    
T  30813918 agctatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 35862070 - 35862034
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||| |||||||||| |||||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 43243139 - 43243103
Alignment:
Q  102 acacgacatcgacacttgtaattacactgaattatgt 138  Q
    |||||||||||||||||||||||||| | ||||||||    
T  43243139 acacgacatcgacacttgtaattacattaaattatgt 43243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 45056874 - 45056922
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgt 87  Q
    ||||| |||||||||||||||||| | ||||| ||||| ||||||||||    
T  45056874 aagcacggacactccttggattagccatgtccaagtgttggacatgtgt 45056922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 8e-34; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 34 - 185
Target Start/End: Original strand, 41961579 - 41961729
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 41961678  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
     ||||||       |||||||||||||||| |||  ||||||||||| ||||    
T  41961679 aatgtga-tattttcaaattattagttgtgacggcgtgtcagtgtctgtgtc 41961729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 4987222 - 4987380
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||| | |||||||||| |||||||||||||||| |||||||||| ||||||||||| ||| ||||||| || | |||||||||||||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtg-tctatgtctgtatccgt 194  Q
    |||||       ||||||||||| ||||||||  |||||||| |||| ||||||||||||    
T  4987322 tgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgttctaggtctgtatccgt 4987380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 34185052 - 34185158
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||  |||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  134 tatgtga 140  Q
    | |||||    
T  34185152 tgtgtga 34185158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 14209243 - 14209079
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||| ||||||||||| || ||||  ||||| ||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 14209144  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttca 200  Q
    |||||||        |||||||||||||||||||  |||| |||||| |||| | ||||||||||||    
T  14209143 tatgtgatttttta-aaattattagttgtgtcggcgtgtc-gtgtctgtgtccgcatccgtgcttca 14209079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 28812633 - 28812477
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnn 145  Q
    ||||||||| |||||||||||||||   |||||||||||| ||||||| |||| | |||||||| |||||||||||| |||||||||||||||||         
T  28812633 gacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtga-tttc 28812535  T
Q  146 nncaaattattagttgtgtcggtttgtcagtgt-ctatgtctgtatccgtgcttcatag 203  Q
      ||||||||||||||||||||  |||| |||| |  ||||||||||||||||||||||    
T  28812534 ttcaaattattagttgtgtcggcgtgtc-gtgtccgttgtctgtatccgtgcttcatag 28812477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 28918120 - 28918025
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||         ||||||| |||||||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc---------cacgacaccgacacttgtaattacactgaatta 28918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 40993275 - 40993346
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 14217021 - 14216920
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||   ||||||||  |||||||||||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  135 at 136  Q
    ||    
T  14216921 at 14216920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 14223150 - 14223049
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||   ||||||||  |||||||||||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  135 at 136  Q
    ||    
T  14223050 at 14223049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 15796221 - 15796325
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||||| | |||||| ||||||||||||||| || |||| ||||| |||| |||||||||| | |||||||| ||||| |||||||||||||||    
T  15796221 agctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactga 15796320  T
Q  132 attat 136  Q
    |||||    
T  15796321 attat 15796325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 49651716 - 49651821
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||| || |||||||| ||||||| |||||||| ||||||||||||||    |||||||||| ||||||||||||||||| |||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaat 49651814  T
Q  134 tatgtga 140  Q
    |||||||    
T  49651815 tatgtga 49651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 27505371 - 27505270
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| |||||||||| ||||||||| |||||| |||||||||| ||||||||||       ||||||||| ||||||||||||||||||| ||    
T  27505371 gctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtc------agacacgacaccgacacttgtaattacacttaa 27505278  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  27505277 ttatgtga 27505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 29508567 - 29508407
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| ||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||      | |||||||||| | ||||||||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgaca-----ccaacatcgacacatataattacactgaatta 29508473  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcata 202  Q
    | |||       |||||||||||| || ||||| ||||| |||| ||||||||| | ||||||||||    
T  29508472 tatga-ttttttcaaattattagtggtatcggtgtgtcaatgtccatgtctgtaacagtgcttcata 29508407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 8039764 - 8039866
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  || |||| | |||||| ||||||||| ||||||||||||| || ||||||||| |||||||||| |||||| | ||||||||||||||    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaat 8039863  T
Q  134 tat 136  Q
    |||    
T  8039864 tat 8039866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 14832205 - 14832123
Alignment:
Q  58 attaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||| |||||||||| ||||||||||||| | ||||||||||  |||||||||||||||| ||| ||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtga 14832123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 55401196 - 55401123
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||| |||||||||| |||||||||||||| | |||||||||| ||||||||||||||| ||||||    
T  55401196 agctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 20503584 - 20503429
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||           | ||| |||||||||||||||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtc-----------caacaccgacacttgtaattacactgaat 20503496  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcata 202  Q
    ||||| |       ||||||||| ||||||||||  ||||||||||  |||| ||||||||||||||||    
T  20503495 tatgtca-ttttttcaaattatttgttgtgtcggcgtgtcagtgtc-gtgtccgtatccgtgcttcata 20503429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 16789141 - 16789040
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||   |||||| ||||||| |||| ||||||||||| |||||||||  ||||||||| | |||||| ||||||||||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtccc-gtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaat 16789043  T
Q  134 tat 136  Q
    |||    
T  16789042 tat 16789040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 10955075 - 10955000
Alignment:
Q  33 gctatgaagcatggacact---ccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||| |||||||   ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  10955075 gctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 15999951 - 16000095
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| ||    ||||||     ||||||||||| ||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacac-----cgacacttgtagttacactgaatt 16000045  T
Q  135 atgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    |||| |        |||||||||||||||||||  ||||||||||| ||||    
T  16000046 atgttattttttt-aaattattagttgtgtcggcgtgtcagtgtctgtgtc 16000095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 7171620 - 7171556
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||||  ||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgaca 7171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 13845460 - 13845536
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | ||||| |||| || |||||||||||| ||||||    
T  13845460 acaagctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacac 13845536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 14829816 - 14829670
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggac-atgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    |||||| ||||| ||||  ||||||||||||||| |||||| || |  | |||||||| ||| |||||||||| ||||||||||||||||  ||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  137 gtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    ||||       ||||||||||| ||||||||  ||||||||||| ||||    
T  14829716 gtga--tttttcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 203
Target Start/End: Complemental strand, 34910397 - 34910279
Alignment:
Q  84 gtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtct-at 182  Q
    ||||| ||||||||| ||| |||||| |||| |||||||||||||||||||||||||       ||||||||||||||||||||  |||| ||||||  |    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtga-ttttttcaaattattagttgtgtcggcgtgtc-gtgtctggt 34910300  T
Q  183 gtctgtatccgtgcttcatag 203  Q
    ||| |||||||||||||||||    
T  34910299 gtccgtatccgtgcttcatag 34910279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 55213092 - 55212987
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||| |||| ||| ||| ||||||||| ||||||| | |||||||||| |||| ||| |||||| |||||| ||| |||||||||||||| |||| |||    
T  55213092 ctatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaat 55212994  T
Q  134 tatgtga 140  Q
    |||||||    
T  55212993 tatgtga 55212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 3631792 - 3631739
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  3631792 ggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgaca 3631739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 8789489 - 8789561
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca--tgtgtcgtgtccgacaacgacac 105  Q
    ||||||||| |||||||||| |||||||||||||| | ||||| ||||  |||||||||||||||| ||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacac 8789561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 13806370 - 13806270
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacac 128  Q
    |||||| |||||||| |||||||| | |||||||||||||||| | ||||| ||||||| |||||  ||| |||||||||| |||||| | |||||| ||    
T  13806370 acaagccatgaagcacggacactc-tcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacacgacaccgacacatataattatac 13806272  T
Q  129 tg 130  Q
    ||    
T  13806271 tg 13806270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 37077488 - 37077384
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgt-cgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||| ||||| ||||||||||||| ||||||| |||||||||||| || ||||| ||||| ||||| ||||  ||||| | | ||| || |||||    
T  37077488 tatgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgacatgacaatgacacatatgattccattgaat 37077389  T
Q  134 tatgt 138  Q
    |||||    
T  37077388 tatgt 37077384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 750590 - 750653
Alignment:
Q  77 cggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||| ||||||||||||| | |||||||||| |||||||||||||| ||  |||||||||||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtga 750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 16192728 - 16192783
Alignment:
Q  83 tgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||||| |||| |||||||||||| |||| | |||||||||||||||||||    
T  16192728 tgtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgt 16192783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 5407199 - 5407253
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc 88  Q
    ||||||||||||||||||| |||||||||||||||||  | |||||||| |||||    
T  5407199 ctatgaagcatggacactctttggattaggcgtgtcctggcgtcggacacgtgtc 5407253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 8842448 - 8842378
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgaca 104  Q
    |||||||||| |||||||||| |||||||||||||| || | ||  |||||||||||||| |||| |||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgaca 8842378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 140
Target Start/End: Complemental strand, 11666070 - 11665968
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatg 137  Q
    |||||| |||||||||||| ||||||||||| ||  | || |||| ||||||||||  ||| | |||||||| |||||| | |||||||||| |||| ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  138 tga 140  Q
    |||    
T  11665970 tga 11665968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 16789583 - 16789633
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||||||||||||| |||||||| |||||||  |||||||||    
T  16789583 agctatgaagcatggacactcctaggattaggtgtgtcccgttgtcggaca 16789633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 25074915 - 25074866
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||| | |||||||| |||||||| ||||||||||||||||||    
T  25074915 gctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggaca 25074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 32804485 - 32804546
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccga 96  Q
    ||||||||| ||||||||||  |||||||||| |  ||||| ||||||||||||||||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga 32804546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 3163971 - 3164019
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||||||||||| | |||||||||||| | ||||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggaca 3164019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 8039341 - 8039289
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||||||||  ||||||||||||||||| ||||||| | ||||||||    
T  8039341 caagctatgaagcataaacactccttggattaggtgtgtcccggagtcggaca 8039289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 15864950 - 15864887
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgaca 98  Q
    ||||||||| |||||||| |||||||||||||||||| ||||| |||| ||||| ||||||||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtccc-gtgtcagacacgtgtcggtgtccgaca 15864887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 35994744 - 35994816
Alignment:
Q  111 cgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    ||||||||||||||||||||||||||||||       ||||||||||| |||||||| |||||| |||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtga--tttttcaaattattagctgtgtcggcttgtcattgtccatgtc 35994816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 40052431 - 40052383
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| | |||||||| |||||||||||||||| ||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 1389956 - 1389909
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||| |||||||||||||||||||| |||||  ||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggaca 1389909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 1509614 - 1509563
Alignment:
Q  89 gtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| |||| ||| |||||| ||||||||||||||||||| ||||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtga 1509563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 4990909 - 4990948
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  4990909 aagctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 25775568 - 25775533
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtga 25775533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 34307735 - 34307790
Alignment:
Q  54 ttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgaca 109  Q
    |||||||||||||||| |||| ||| | | ||||||||||||||| ||||||||||    
T  34307735 ttggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgaca 34307790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 17005548 - 17005650
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||   |||||||| |||||||  ||||||  ||||| |||| ||||  |||| |||| | |||| ||| |||||||| ||||||||||||||    
T  17005548 ctatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaat 17005647  T
Q  134 tat 136  Q
    |||    
T  17005648 tat 17005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 21479198 - 21479104
Alignment:
Q  79 gacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgt 178  Q
    |||||||||||||||||||| ||||||     ||||||| |||||||||||||||| |||||       ||||||||||| ||||||||  |||||||||    
T  21479198 gacatgtgtcgtgtccgacaccgacac-----cgacactagtaattacactgaattgtgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 2408589 - 2408634
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcg 78  Q
    ||||||||||| ||| ||||||| ||||||||||||||| ||||||    
T  2408589 gctatgaagcacggagactccttagattaggcgtgtcccggtgtcg 2408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 3164019 - 3164060
Alignment:
Q  99 acgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||| ||||||||  ||||||||||||||||||    
T  3164019 acgacacgacatcaacacttgttcttacactgaattatgtga 3164060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 3730108 - 3730145
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtccc 71  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  3730108 ctatgaagcatggacactcctcggattaggtgtgtccc 3730145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 5440967 - 5441032
Alignment:
Q  34 ctatgaagcatggacactccttggattaggc-gtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| |||||||||| | ||||||| ||||| | |||| |||||||||||||||| ||||    
T  5440967 ctatgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgaca 5441032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 14747625 - 14747547
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||||||  ||| |||||||||||||| ||||||||||       ||||||||||| ||||||||  ||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 26508163 - 26508134
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  26508163 cgacacttgtaattacactgaattatgtga 26508134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 4466540 - 4466588
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| |||||||||| | || || |||||||||||||||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggaca 4466588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 4990964 - 4991000
Alignment:
Q  102 acacgacatcgacacttgtaattacactgaattatgt 138  Q
    |||||||  ||||||||||||||||||||||||||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgt 4991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 9800170 - 9800066
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||| || |||  ||||||||||||||  ||||| |||| || || | || || | |||||||||| ||||||||  |||||||| ||||    
T  9800170 ctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacgtatcatctctgataccgacacgacaccgacacttacaattacacggaat 9800071  T
Q  134 tatgt 138  Q
    |||||    
T  9800070 tatgt 9800066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 10455915 - 10455867
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||   |||||||||||||||  |||||||||||||||||||    
T  10455915 ctatgaagcacatacactccttggattaaacgtgtcccagtgtcggaca 10455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 11610628 - 11610580
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| ||||||||||  |||||||||||||||  |||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 21211413 - 21211365
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||   |||||||| |||||||| ||||||||||||||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggaca 21211365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 25948882 - 25948922
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  25948882 cgacacgacaccaacacttataattacactgaattatgtga 25948922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 26492145 - 26492209
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||  ||||| |||| ||||||| ||||||   ||||| ||||||||||||||||||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgaca 26492209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 45451633 - 45451601
Alignment:
Q  73 gtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||||||||||||||||| ||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacac 45451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 21542159 - 21542056
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||| ||| ||||| |||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatt 21542060  T
Q  135 atgt 138  Q
    ||||    
T  21542059 atgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 21522882 - 21522776
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||| ||| |||||||| |||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  21522882 agctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactga 21522783  T
Q  132 attatgt 138  Q
    |||||||    
T  21522782 attatgt 21522776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 21533448 - 21533342
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||| ||| |||||||| |||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  21533448 agctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactga 21533349  T
Q  132 attatgt 138  Q
    |||||||    
T  21533348 attatgt 21533342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 39698671 - 39698565
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||| | |||||||| |  |||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  134 tatgtga 140  Q
    |||||||    
T  39698571 tatgtga 39698565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 7677836 - 7677729
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||||||||  ||| ||||| |||||||||||||||| |||||||||||||| |||||| |||| |||||||||| |||||||| ||||| |||||||    
T  7677836 gctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaa 7677737  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  7677736 ttatgtga 7677729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 31084447 - 31084309
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||| || |||||||||| ||||||||| ||||||||||||||||| |||||||||||      ||||||||||||||||||||||||||| |||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtcc------gacacgacatcgacacttgtaattacattgaat 31084354  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||||       ||||||||||| ||||||||  ||||||||||    
T  31084353 tatgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 6401627 - 6401522
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| ||||||||||||||| |||||| |||| ||||| |||| |||||||||||||||  ||||||||| |||||| | ||||||||||| |||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtatt 6401528  T
Q  135 atgtga 140  Q
     |||||    
T  6401527 ttgtga 6401522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 19579818 - 19579725
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||| |||||||||||||||| ||||  ||||| ||||||||||||||  ||||||||| |||||||||||||| |||| ||||||||||    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtga 19579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 21576684 - 21576780
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||||||           ||||||||||||||||||||||||||||    
T  21576684 gctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtc-----------cgacatcgacacttgtaattacactgaa 21576772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 15382592 - 15382507
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||     ||||||||||||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac-----cgacacttgtaattatactgaattat 15382507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 21814391 - 21814285
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | ||| ||||||||| ||||||||||| ||| | |||| ||||||||||||||| |||||||||| |||||| | ||||||||||| ||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcat 21814292  T
Q  134 tatgtga 140  Q
    | |||||    
T  21814291 tttgtga 21814285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 30502330 - 30502399
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 30542673 - 30542742
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 30183655 - 30183534
Alignment:
Q  58 attaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattatta 157  Q
    ||||||||||||||||||||||||| |||||||||| || | | |||||||| ||||||||||||||| || |||| ||||||       ||||||||||    
T  30183655 attaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtga-tattttcaaattatta 30183557  T
Q  158 gttgtgtcggtttgtcagtgtct 180  Q
    ||||||||||  | |||||||||    
T  30183556 gttgtgtcggcatatcagtgtct 30183534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 37328775 - 37328879
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||| |||| |||| || ||||||  |  |||||||||||| |||||||||| |||||| ||||||||||||||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggac--gcatcgtgtccgacaccgacacgacaccgacacatgtaattacactgaat 37328872  T
Q  134 tatgtga 140  Q
    | |||||    
T  37328873 tttgtga 37328879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 3966632 - 3966527
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||||| ||||||| ||||||||  ||| |||||  ||| ||||||||||  ||||||||| |||||| | |||||||||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  135 atgtga 140  Q
     |||||    
T  3966532 gtgtga 3966527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 14674322 - 14674230
Alignment:
Q  111 cgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatagc 204  Q
    ||||||||||||||||||| ||||||||||       ||||||||||| ||||||||  ||||||||||  |||||||||||||||||||||||    
T  14674322 cgacacttgtaattacactaaattatgtgatttttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtctgtatccgtgcttcatagc 14674230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 17088399 - 17088309
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| |||||||||||||||| ||||||||||     |||| |||||| ||||||||||  |||||||||||| ||||| ||||||||||    
T  17088399 ggacactcctcggattaggcgtgtcccggtgtcggaca-----cgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtga 17088309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 17123166 - 17123097
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgaca 104  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||||| ||| |||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgaca 17123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 21190998 - 21191067
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| |||||||||| |||||||||||||||| | |||||||| |||| |||||||||| ||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacac 21191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21351889 - 21351978
Alignment:
Q  89 gtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    ||||| |||| ||||| |||| ||||||||||||||||||||||||||||||       | ||||||||||||||||||| ||||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttcc-aattattagttgtgtcggtgtgtcagtgtc 21351978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 23015926 - 23016024
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||  |||||||||| ||||||||||||||||| |||||||||  |||||||||      ||| || |||||||||| | ||||||||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtc------cgatacaacatcgacacctataattacactgaatta 23016019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 28588614 - 28588685
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||||||| | |||||| ||||||||  ||||| || ||||||||||||||||| ||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacac 28588685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 203
Target Start/End: Complemental strand, 43001922 - 43001762
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| |||||||||| |||||||||||||||  ||||  |||| |||||||||||      |||||  || | |||||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtcc------gacacatcaccaacacttgtaattacactgaatta 43001829  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    ||| |       |||||||||||  ||||||   ||||||||||  |||| |||||||||||||||||    
T  43001828 tgt-aattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccgtatccgtgcttcatag 43001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 43565000 - 43564929
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||||||| || |||||||||||||||| | ||||||||  |||||||||||||| ||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 30098456 - 30098350
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||| |||| |||||||| ||||||  ||||| |||| |||||||||||||||  ||| ||| | |||||  | |||||||| |||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaat 30098357  T
Q  134 tatgtga 140  Q
    |||||||    
T  30098356 tatgtga 30098350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 40131751 - 40131645
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||| || |||||||||||||| ||| ||||||||| |||| ||||   |||||||| |||| ||| |||||| ||| | || |||||| |||||||    
T  40131751 ctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactgaat 40131652  T
Q  134 tatgtga 140  Q
    |||||||    
T  40131651 tatgtga 40131645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 19452998 - 19453087
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattac 126  Q
    ||||||| |||| |||||||||| |||||| || | ||||  ||||||||||||||||||||  ||||||||| |||||| | |||||||    
T  19452998 tgaagcacggacgctccttggataaggcgtatctccgtgtgagacatgtgtcgtgtccgacattgacacgacaccgacacatataattac 19453087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 21194062 - 21194123
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 94  Q
    ||||| ||||| |||||||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  21194062 gctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtcc 21194123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 14873641 - 14873577
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| |||||||||| |||||||||||||||| |||| ||||| |||| | ||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgaca 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 36642716 - 36642795
Alignment:
Q  58 attaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    |||||||||||||| |||||||||| ||||||||||||||| | ||| |||| |||||||| || ||||||| || |||||    
T  36642716 attaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgt 36642795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 41091184 - 41091292
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||||| | ||||||||  |||||| |||| |   ||||  ||||  ||||| ||||||||  |||||||||||||||| | ||||||||||||    
T  41091184 agctatgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactga 41091283  T
Q  132 attatgtga 140  Q
    |||||||||    
T  41091284 attatgtga 41091292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 30098982 - 30099049
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||| | ||||||||||||| ||||||||||| ||||| |||| ||||||| ||||||| ||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacac 30099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 42893479 - 42893408
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||||||||||||   |||||||||||||  |||||||||| |||| ||||| |||| ||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacac 42893408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 19820328 - 19820389
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| ||||||||||  ||||||||||||||| ||||||||||   |||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgaca 19820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 24238603 - 24238661
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 94  Q
    |||||||| |||||||||| |||||| || ||||||||||| ||||| |||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtcc 24238661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 21319927 - 21319976
Alignment:
Q  87 tcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    |||||||||||| ||||| ||||||||||||||| |||||| ||||||||    
T  21319927 tcgtgtccgacaccgacatgacatcgacacttgtgattacattgaattat 21319976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 38464308 - 38464365
Alignment:
Q  29 acaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtg 86  Q
    |||| ||||||||||  ||||||||| |||||||| ||||||| ||||||||||||||    
T  38464308 acaacctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtg 38464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 39206005 - 39205940
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||||| ||||||||||||||||  ||| |||| ||||||| || |||||||||| ||||    
T  39206005 gctatgaagcatagacactccttggattaaacgtatcccggtgtcgggcacgtgtcgtgtcggaca 39205940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 13287383 - 13287434
Alignment:
Q  88 cgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  13287383 cgtgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtga 13287434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 19552476 - 19552578
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||| || |||||||||| |||||||| |||||| |||||||||||     | |||| |||| ||||||||||||||||||| ||  |||||| |||    
T  19552476 ctatgaaacacggacactcctcggattaggtgtgtccaagtgtcggaca--acacttgtctgacaccgacacgacatcgacacttata--tacacttaat 19552571  T
Q  134 tatgtga 140  Q
    |||||||    
T  19552572 tatgtga 19552578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 32630675 - 32630739
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||| ||||||||| | |||||| ||||| || ||||||||| ||||||| |||||||    
T  32630675 ctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgaca 32630739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 6035500 - 6035445
Alignment:
Q  148 caaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    |||||||||||  |||||||  ||||||||||| ||||| ||||||||||||||||    
T  6035500 caaattattagcggtgtcggcgtgtcagtgtctttgtctatatccgtgcttcatag 6035445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 6247681 - 6247646
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtga 6247646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 11686068 - 11685966
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||  |||||| |||| |   || | ||||| ||||||||||||||| ||| |||||| |||||| | |||||||||| |||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaat 11685970  T
Q  134 tatg 137  Q
    ||||    
T  11685969 tatg 11685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 15884047 - 15884012
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtga 15884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 6418150 - 6418056
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||| ||| ||||| ||| ||| ||| ||| ||||||||||||| ||||| ||| ||||| ||||||| | ||||||||  |||| ||||||    
T  6418150 gacactcattgaattagacgtatcctagtatcgaacatgtgtcgtgttcgacaccgatacgacgtcgacacatataattacatagaatcatgtga 6418056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 16304366 - 16304428
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccga 96  Q
    |||||||||| ||||| |||| ||||||| |||||| | ||||||| || |||||||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccga 16304428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 21191062 - 21191129
Alignment:
Q  111 cgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    ||||||||||||||||||||||||||||||       ||||||||||| ||||||||  ||||||||||    
T  21191062 cgacacttgtaattacactgaattatgtga-ttttttcaaattattagctgtgtcggcatgtcagtgtc 21191129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 39342549 - 39342511
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatg 84  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  39342549 gacactccttggattaggcgtgtcccggtgtctgacatg 39342511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 7218273 - 7218302
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  7218273 cgacacttgtaattacactgaattatgtga 7218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 30135377 - 30135311
Alignment:
Q  101 gacacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcgg 167  Q
    |||| |||| ||||||||||||||||| ||| ||||||||       ||||||||||||||||||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcgg 30135311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 35017162 - 35017125
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtccc 71  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtccc 35017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 42029872 - 42029807
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||| ||| |||||||||| |||| |||||||||   ||| | ||||||||||||||||||||    
T  42029872 gctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgaca 42029807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 43554634 - 43554570
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgaca 109  Q
    ||||||| || |||||||||||||||| |||||||||| | ||| |||||||||| ||||||||||    
T  43554634 ggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgacaccgacacgaca 43554570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 4105374 - 4105338
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagt 74  Q
    |||||| |||||||||| |||||||||||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagt 4105338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 6770655 - 6770596
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| |||||||| | ||||||||||||| |||     |||||||||||||||||||||    
T  6770655 ctatgaagcacggacactcttcggattaggcgtgtacca-----ggacatgtgtcgtgtccgaca 6770596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 10298669 - 10298633
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||| |||||||||| |||||||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 22423764 - 22423800
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||| |||||||||| |||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 27932354 - 27932290
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||   |||||||| | |||||||||||||  ||||| |||| |||||||||||||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgaca 27932290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 39695951 - 39695998
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||  ||||||||| |||||||||||||||| ||||||||||    
T  39695951 ctatgaagcaccgacactcctaggattaggcgtgtccc-gtgtcggaca 39695998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 3778 - 3884
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||| |  ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaat 3877  T
Q  134 tatgtga 140  Q
    |||||||    
T  3878 tatgtga 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 22652108 - 22651962
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||||||||||  |||||||||||||| |||||||||| ||||||||||||||| | |||    
T  22652108 agctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattga 22652009  T
Q  132 attatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||||||       ||||||||||| ||||||||  ||||||||||    
T  22652008 attatgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgtc 22651962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 15816056 - 15816202
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||||| ||||||| || |||||||||||||||| ||||||||   ||||||||||||||| | |||||||| |||||||| |||||||||| |    
T  15816056 agctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaa 15816155  T
Q  132 attatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||||||       ||||||||||||||||||||  ||||||||||    
T  15816156 attatgtga-ttttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 34 - 179
Target Start/End: Original strand, 29510233 - 29510377
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||| ||||||| |||||||||| | ||||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    | |||||       ||||||||||| ||||||||  ||||||||||    
T  29510333 tttgtga-ttttttcaaattattagctgtgtcggcgtgtcagtgtc 29510377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 28745630 - 28745522
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||||| |||||||||||| ||||| | |||| | ||| |||||| ||||||||||||||| |||||||||||||||| ||||| ||||| |||    
T  28745630 agctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattga 28745531  T
Q  132 attatgtga 140  Q
    |||||||||    
T  28745530 attatgtga 28745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 29447040 - 29447145
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||||| |||||||||||||||  ||||| ||||  |||||||||||||| ||||| |||| ||||||||||| ||||| ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  135 atgtga 140  Q
    ||||||    
T  29447140 atgtga 29447145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 4673354 - 4673454
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  ||||||||||||||||||||||| || |||||||| ||| ||||||||||||| | ||| ||||  || |||||||||||||||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaat 4673453  T
Q  134 t 134  Q
    |    
T  4673454 t 4673454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 6065585 - 6065692
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| |||||||||||| |||| |||||| || ||||||||||||||||||||||||||  ||||||| || ||  | |||||||| |||| |    
T  6065585 gctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacacgatattgattcatgtaattatactgta 6065684  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  6065685 ttatgtga 6065692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 34450961 - 34451072
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca-----acgacacgacatcgacacttgtaattacac 128  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||     ||||||||||| |||||| | |||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacacgacaccgacacatataattacac 34451060  T
Q  129 tgaattatgtga 140  Q
    || ||| |||||    
T  34451061 tgcattttgtga 34451072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 11803389 - 11803283
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| ||||||| ||||| || |||||||||||||||||| ||| ||| | |||| ||| | |||| | ||||||||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaat 11803290  T
Q  134 tatgtga 140  Q
    |||||||    
T  11803289 tatgtga 11803283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 21465544 - 21465440
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||||| ||||||||||   ||||||||| |||| |||| ||||| |||||||||||||||  ||||||||| | |||||||||||||||  ||    
T  21465544 agctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcga 21465445  T
Q  132 attat 136  Q
    |||||    
T  21465444 attat 21465440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 2572016 - 2572091
Alignment:
Q  65 gtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||| || ||||||| |||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtga 2572091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 36450692 - 36450851
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    ||||||||||||  ||||||||| |||||||||||||||  |||||||||| | ||||||||           ||||| | |||||||||||||||||||    
T  36450692 agctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtc-----------cgacacctacacttgtaattacactga 36450780  T
Q  132 attatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    ||| |||||       ||||||||||||||||||||  ||||||||||  |||| |||||||||||||||||    
T  36450781 attctgtga-ttttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatag 36450851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 8343446 - 8343340
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  ||||||| | |||||||||||||||| |||||||||| |||||||||| ||||     ||||||  |||||||||||||||||| |||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaat 8343347  T
Q  134 tatgtga 140  Q
    |||||||    
T  8343346 tatgtga 8343340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 26902104 - 26902210
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||  ||| ||||||||||| ||| | |||| |||||||||||||||   | |||||| |||||| | ||||||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  134 tatgtga 140  Q
    |||||||    
T  26902204 tatgtga 26902210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31557115 - 31557051
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  31557115 ctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgaca 31557051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 18407838 - 18407767
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||||||||||   ||||||||||||| |||||||||||||||||||||||| || ||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacac 18407767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 22197671 - 22197777
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac-gacatcgacacttgtaattacactgaa 132  Q
    |||| ||||| ||||||||||  |||||||||||  || |||||||||| ||||| |||||||| ||||||| ||||  |||||||||||||||||| ||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgac-acgacactgacactgacacttgtaattacactaaa 22197769  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  22197770 ttatgtga 22197777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 3951473 - 3951547
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||| ||| |||||||||||||||||||| || ||||| |||| |||||||||| |||| ||||||    
T  3951473 aagctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 33405323 - 33405395
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||| |||| |||||||| ||||||||| |||||||  ||||| |||||||||||||||||||| ||||||    
T  33405323 gctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacac 33405395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||| ||||||||||   |||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 3025668 - 3025606
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||| |||||||||| ||||||| |||||| ||||||| |||| |||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgaca 3025606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 11927015 - 11927121
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||| | |||||||||||||| |  ||| ||| |  ||||||||  |||| | |||||||| |||||| | ||||||||||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaat 11927114  T
Q  134 tatgtga 140  Q
    |||||||    
T  11927115 tatgtga 11927121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 11944795 - 11944689
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | |||||| | |||||||||||||| | |||||||| |  ||||||||  |||| | |||||||| |||||| | |||||||||||| |    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagt 11944696  T
Q  134 tatgtga 140  Q
    |||||||    
T  11944695 tatgtga 11944689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 43737752 - 43737822
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||| ||||||||||||||| |||||| |||| ||||| ||||  |||||||||||||| ||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacac 43737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  46 gacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 94  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 24362173 - 24362237
Alignment:
Q  77 cggacatgtgtcgtgtccg-acaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||| |||||||||||| ||| ||||||||||| ||||| | |||||||||||||||||||||    
T  24362173 cggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtga 24362237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 12570461 - 12570542
Alignment:
Q  57 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtg 139  Q
    ||||||||||||||  |||||||||| |||| ||||| |||| ||| || |||||||||| | |||||||||| |||||||||    
T  12570461 gattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatac-acatcgacacatataattacacttaattatgtg 12570542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 13397670 - 13397620
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatg 84  Q
    |||||||||| |||||||||||| |||||||||||| | ||||||||||||    
T  13397670 ctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggacatg 13397620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 14639745 - 14639787
Alignment:
Q  49 actccttggattaggcgtgtcccagtgtcggacatgtgtcgtg 91  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  14639745 actccttggattaggcatgtcccggtgtcggacatgtgtcgtg 14639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 25566903 - 25566865
Alignment:
Q  102 acacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtga 25566865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 27067231 - 27067322
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattaca 127  Q
    |||||||||| |||||||||| ||||||| |||   || ||||  ||||  |||||||||||||| ||||||||||  ||||||||||||||||    
T  27067231 ctatgaagcacggacactcctcggattagacgtt--ccggtgttcgacacatgtcgtgtccgacaccgacacgacactgacacttgtaattaca 27067322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 15023199 - 15023268
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||| ||||||||||||| ||||||| ||||| ||||  ||||||| ||||||| ||||||| ||||||    
T  15023199 atgaatcatggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacac 15023268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 20679337 - 20679406
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||||||| || | ||||||||||| |||||||||| |||| | ||| |||| ||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacac 20679406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8798793 - 8798841
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||  ||||||||||||||||||||||||| || ||||||||||    
T  8798793 ctatgaagtctggacactccttggattaggcgtgttccggtgtcggaca 8798841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 13436910 - 13436954
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcg 78  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 17751775 - 17751703
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacac 105  Q
    |||||||||  |||||||||| |||||||||||||||| |||||||  ||| ||| |||||||||| ||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 17751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 17760762 - 17760690
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacac 105  Q
    |||||||||  |||||||||| |||||||||||||||| |||||||  ||| ||| |||||||||| ||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 17760690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 22204762 - 22204714
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||| ||||||| |||||||||||||||| |||||| ||||||||||||    
T  22204762 ctataaagcatgaacactccttggattagacgtgtctcagtgtcggaca 22204714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 24858136 - 24858036
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||||||||   ||||||||  ||||||||||||||| | || |||||  ||||||||||||||      ||||| ||||||||||| ||||||||||    
T  24858136 gctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgaca------cgacaacgacacttgta-ttacactgaa 24858044  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  24858043 ttatgtga 24858036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 30067968 - 30068016
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggaca 30068016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 34127168 - 34127208
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  34127168 caagctatgaagcacggacactccttggattaggtgtgtcc 34127208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 40332299 - 40332239
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| ||||| |||| ||||| ||||||||||| ||| ||||||    
T  40332299 ggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacac 40332239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 41831874 - 41831975
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||| |||||||||||| | ||||| |||||||   ||||||| | || |||||||||||| | |||      ||||||||||| ||||||||||    
T  41831874 gctatgaagaatggacactcctcgaattagacgtgtcctgttgtcggatacgtatcgtgtccgacaccaaca------cgacacttgtagttacactgaa 41831967  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  41831968 ttatgtga 41831975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 44067644 - 44067542
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgaca-cgacatcgacacttgtaattacactgaat 133  Q
    |||||||| |||||||||| | |||||||||||||  |||||||||| |  || ||||||||| |||||| ||||| |||||||| ||||||||||| ||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgac-acgacaccgaca-cgacacttataattacactgtat 44067547  T
Q  134 tatgt 138  Q
    |||||    
T  44067546 tatgt 44067542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 4948711 - 4948676
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtga 4948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 9383088 - 9383049
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcc 70  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  9383088 aagctatgaagcacggacactgcttggattaggcgtgtcc 9383049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 13009423 - 13009469
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  13009423 tatgaagcacggacgctccttggattaggcgtgtccc-gtgtcggaca 13009469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 14134827 - 14134760
Alignment:
Q  25 acctacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    ||||| |||||||||| || |||||||||| | |||||||||||||  ||| |||||| |||||||||    
T  14134827 acctataagctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgt 14134760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 136
Target Start/End: Original strand, 15023257 - 15023288
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattat 136  Q
    ||||||||||||||||||||||||||||||||    
T  15023257 cgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 39820549 - 39820483
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgaca 98  Q
    |||||||||||| ||||||| || |||||||||||||||| |||||||||| | ||| ||||||||||    
T  39820549 agctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgaca 39820483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 44462151 - 44462206
Alignment:
Q  50 ctccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||| ||||||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  44462151 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacac 44462206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 44469684 - 44469739
Alignment:
Q  50 ctccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||| ||||||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  44469684 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacac 44469739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 13403225 - 13403175
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatg 84  Q
    |||||||||| |||||||||||| |||| ||||||| | ||||||||||||    
T  13403225 ctatgaagcacggacactccttgaattaagcgtgtctcggtgtcggacatg 13403175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 18964310 - 18964201
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacg--acatcgacacttgtaattacactg 130  Q
    |||||||||||  ||||||||| |||| ||||||||| | ||||  |||| ||||||||| | ||  |||||||  ||| |||||| | |||||||| ||    
T  18964310 gctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattg 18964211  T
Q  131 aattatgtga 140  Q
    ||||||||||    
T  18964210 aattatgtga 18964201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 24205749 - 24205819
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||| || |||||||||| ||||||||||||| || ||||| |||||| || |||| ||||| ||||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacac 24205819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 31109463 - 31109501
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgtc 77  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtc 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 126298 - 126351
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| ||||||| |||||||| || | ||||| |||||||||||||||    
T  126298 ggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgaca 126351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 24669492 - 24669459
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||| ||||||||||||||||||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgt 24669459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 28384937 - 28385026
Alignment:
Q  49 actccttggattaggcgtgtcccagtgtcggacatgtgt-cgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatg 137  Q
    |||||||||||||||||| |||  |  || ||||||||| |||||| ||||  |||| |||| |||||| | ||||||||||||||||||    
T  28384937 actccttggattaggcgtatcctggcatcagacatgtgtacgtgtctgacactgacatgacaccgacacatataattacactgaattatg 28385026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 40332244 - 40332215
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  40332244 cgacacttgtaattacactgaattatgtga 40332215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 7253691 - 7253627
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||  ||||||||||| || |||||||| || |||||| ||||| |||| ||||||||    
T  7253691 ctatgaagcaaagacactccttgaataaggcgtgttccggtgtcgaacatgagtcgcgtccgaca 7253627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 8343032 - 8342996
Alignment:
Q  104 acgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtga 8342996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 8343086 - 8343038
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||  ||||||| | |||||||||||||||| ||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggaca 8343038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 16641909 - 16641973
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||  ||||||||| |||||||| ||||||| ||||  ||||  ||||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgaca 16641973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 26915202 - 26915250
Alignment:
Q  61 aggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgaca 109  Q
    |||||||||||| |||| |||| || |||||||||||| ||||||||||    
T  26915202 aggcgtgtcccaatgtctgacacgtatcgtgtccgacaccgacacgaca 26915250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 30077394 - 30077422
Alignment:
Q  112 gacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||||||||||||||||||    
T  30077394 gacacttgtaattacactgaattatgtga 30077422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 31514974 - 31514938
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtc 69  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  31514974 gctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 33389295 - 33389343
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||  |||||| ||||||||||| || |||||||||||||||    
T  33389295 ctatgaagcaccgacacttcttggattaggtgtatcccagtgtcggaca 33389343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 185
Target Start/End: Complemental strand, 19482798 - 19482648
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | |||||||| |||||||| |||||||||||||||||| ||||||||||| | | |||||||||| | |||||||||||||||| ||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaat 19482699  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtc 185  Q
    |||||||       ||||||||||||||||||||  ||||||||||| ||||    
T  19482698 tatgtga-tattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 30982808 - 30982913
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||| |||||||||| |||| |||||||||| |||||||| ||||||||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  135 atgtga 140  Q
    ||||||    
T  30982908 atgtga 30982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 28964188 - 28964252
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgaca 28964252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 24613630 - 24613736
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| ||||||| |||||||  ||||| |||| |||||||||| |||| ||||| |||| ||||||||||| ||||| |||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  134 tatgtga 140  Q
    |||||||    
T  24613730 tatgtga 24613736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 16073513 - 16073442
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||| ||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacac 16073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 23292926 - 23292997
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 23292997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 715545 - 715642
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||         ||| |||| | |||||||||||||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 715635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 752871 - 752968
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||         ||| |||| | |||||||||||||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 5414101 - 5414207
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||||||||||| ||| ||||||| ||||| |||| |||||||||||||||  ||||||||| ||| || | ||||||||||| ||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcat 5414200  T
Q  134 tatgtga 140  Q
    | |||||    
T  5414201 tttgtga 5414207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 37496807 - 37496730
Alignment:
Q  61 aggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||| ||| |||||||||| |||||| ||||||||||    
T  37496807 aggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgt 37496730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 19312463 - 19312359
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||| || ||||||| ||  |||||| |||||| | |||||||||| ||||||| |||||||||||||||||| ||| |||| |||||||||||||| |    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  136 tgtga 140  Q
    |||||    
T  19312363 tgtga 19312359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 29205587 - 29205527
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 94  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 848080 - 847977
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    |||||| || ||||||||||||||||||| ||||||| ||||  |||| || |||||||||||| | ||| |||| ||||||||||||||| | ||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatt 847981  T
Q  135 atgt 138  Q
    ||||    
T  847980 atgt 847977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 3947702 - 3947798
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||| |||||||||| |||||||| ||||||  |||||||||| ||||||||||      ||||||||||  |||||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtc------cgacacgacactgacacttgtaattacactgaatt 3947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 22234819 - 22234925
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| | ||||| || |||||||  ||||||  |||||||||| |||||||||| |||| |||||||||| |||||| |  |||||||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaat 22234918  T
Q  134 tatgtga 140  Q
    |||||||    
T  22234919 tatgtga 22234925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 47264116 - 47264010
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  ||| ||| | |||||||||||||||  ||||| |||||||||||| || |||| | ||| |||||||||| |||||||||||| ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaat 47264017  T
Q  134 tatgtga 140  Q
    |||||||    
T  47264016 tatgtga 47264010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 28084640 - 28084546
Alignment:
Q  37 tgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||| ||||         || ||||||||||  |||||||||||||||| ||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgt---------caccgacacgacacagacacttgtaattacattgaattat 28084550  T

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Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 49431145 - 49431074
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||| |||||||||||||||| |||| ||||||||||| |||| ||||| ||||||||||||||| ||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 904052 - 903946
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||| | ||||||||||  ||||||||||||||||||  |||||||||| ||| ||| |||| |  || || | ||||||||||||||    
T  904052 ctatgaagcaaggacatttcttggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaat 903953  T
Q  134 tatgtga 140  Q
    |||||||    
T  903952 tatgtga 903946  T

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Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 3064868 - 3064926
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    |||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 46083920 - 46084026
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||||||||||||||   || ||||||||||| | ||| |||| ||||||||||||| |  ||||||||| |||||| | ||||||||||  ||    
T  46083920 ctatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagat 46084019  T
Q  134 tatgtga 140  Q
    |||||||    
T  46084020 tatgtga 46084026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 4157553 - 4157484
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||| ||||||||| | ||||||||| || | |||||||||||||||||||||||||| ||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 30299008 - 30298910
Alignment:
Q  103 cacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcat 201  Q
    ||||||| |||||||||||||||||||||||||||| |       ||||||||||| ||||||||  ||||||||||  |||| ||||| |||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 30327876 - 30327778
Alignment:
Q  103 cacgacatcgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcat 201  Q
    ||||||| |||||||||||||||||||||||||||| |       ||||||||||| ||||||||  ||||||||||  |||| ||||| |||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 30838335 - 30838238
Alignment:
Q  39 aagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    ||||| |||||||||| || |||||||||||   |||||||||| |||||| ||||||||  ||||||||| ||| |||| |||||||||| ||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattat 30838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 38148667 - 38148760
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||| || ||||||||| |||||||| || | ||||||||||| ||| | |||||||||||||| ||  ||||||||||||||||||||    
T  38148667 acacttcttcgaataggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtga 38148760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 11931410 - 11931304
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||||||| ||||||||| ||||||||| ||||||  |||||||||||| ||| |||| ||| | ||||| ||||||||||| | || ||||||| ||    
T  11931410 ctatgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgt-cgataccgacatgacatcgacacatatatttacactaaa 11931312  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  11931311 ttatgtga 11931304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 19500777 - 19500892
Alignment:
Q  24 tacctacaagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaat 123  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||| | | || || ||   ||||||||||||||| |||||||||| |  ||| | ||||    
T  19500777 tacctacaacctatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacaccgacacgacaccatcacatataat 19500876  T
Q  124 tacactgaattatgtg 139  Q
    |||||| || ||||||    
T  19500877 tacactaaaatatgtg 19500892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 21945618 - 21945551
Alignment:
Q  38 gaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| ||||||||| |||||||||||||  | |||||||||||||||| ||||||||| ||||||    
T  21945618 gaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacac 21945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 27706129 - 27706212
Alignment:
Q  57 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||| || ||||| | |||||||||||||||   ||||||||   ||||||||||||||||| ||||||||||    
T  27706129 gattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtga 27706212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 12708221 - 12708175
Alignment:
Q  90 tgtccgacaacgacacgacatcgacacttgtaattacactgaattat 136  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  12708221 tgtccgacatagacacgacatcgacacttgtaattacactgaattat 12708175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 12895213 - 12895285
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||||| | |||||||| ||||||||||||||||  ||||||| |  |||||||||||||| ||||||    
T  12895213 gctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 14465006 - 14465069
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    ||||||||| ||||||||||  |||||| ||||||||||||||| ||| |||||||||| ||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgaca 14465069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 16184950 - 16184875
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgaca 109  Q
    ||||||||||   |||||||| ||||||||||||||||||||||||||| |  |||| | ||||| ||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatcgtatgcgacaccgacacgaca 16184875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 34306744 - 34306815
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| | ||| ||||  ||||||||||||| | |||||||||| ||||||||||||||| ||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 35157925 - 35157996
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||||||| || |||||| |||||| || |||| |||||||||||||||| |||| ||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacac 35157996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 8423658 - 8423728
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgaca 104  Q
    |||||| ||| ||||||| ||  ||||||||||||||| ||||||||||  |||||||||||||| |||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 11596337 - 11596387
Alignment:
Q  90 tgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||| ||||| ||||||||| | ||||||||||||||||||||||||||||    
T  11596337 tgtcggacaatgacacgacacctacacttgtaattacactgaattatgtga 11596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 22440559 - 22440605
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggaca 22440605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 36635449 - 36635348
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||| | |||||||||||||||| ||||| |||  |||||||||| ||||   ||||||     |||| | ||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacga-----acacatataattacactgaat 36635355  T
Q  134 tatgtga 140  Q
    |||||||    
T  36635354 tatgtga 36635348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 4157266 - 4157197
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||  ||||||||| | |||||| || || | |||||||||||||||||||||||||| ||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 18966628 - 18966567
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccg 95  Q
    |||||||||| ||||||||||| |||||||||| ||||  ||||||||| |||| |||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 4383447 - 4383391
Alignment:
Q  84 gtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||  |||| ||||||||||  |||| ||||||||||||||||||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtga 4383391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 5225542 - 5225646
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  || ||||| | ||||||||||||||| | ||| || |||| |||||||||||| | |||||||| |||||| | | ||| || |||||    
T  5225542 ctatgaagcacagatactccatagattaggcgtgtcccggggtccgatatgtatcgtgtccgacaccaacacgacaccgacacatattattgcattgaat 5225641  T
Q  134 tatgt 138  Q
    |||||    
T  5225642 tatgt 5225646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 7424774 - 7424742
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgt 68  Q
    |||||||||||||||||||||||||||||||||    
T  7424774 atgaagcatggacactccttggattaggcgtgt 7424742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 20521781 - 20521861
Alignment:
Q  30 caagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgaca 109  Q
    |||||||||||||  |||  ||||||||||||||||||||   || ||||||||| ||| |||||||||| ||||||||||    
T  20521781 caagctatgaagctcggattctccttggattaggcgtgtcatggtttcggacatgcgtcggtgtccgacaccgacacgaca 20521861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 24343632 - 24343556
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgaca 109  Q
    |||||||||| ||||||||||  || |||||||||||| |||||||||| | ||| ||||| |||| ||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgaca 24343556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 12797338 - 12797373
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga 12797373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 12895054 - 12895151
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    ||||||||||| |||||||| | | ||||||||| |||| |||||||    |||||||||||||||      ||||| ||||||||||||||||  ||||    
T  12895054 gctatgaagcacggacactcttcgaattaggcgtatcccggtgtcgg----gtgtcgtgtccgaca------cgacaccgacacttgtaattactttgaa 12895143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 29205497 - 29205408
Alignment:
Q  111 cgacacttgtaattacactgaattatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtctatgtctgtatccgtgcttcatag 203  Q
    ||||||||||||||||||||||||||||||       |||||||||||  |||| ||  |||| ||||| ||||| |||||||||||||||||    
T  29205497 cgacacttgtaattacactgaattatgtga-ttttttcaaattattagccgtgttgg--tgtccgtgtccatgtccgtatccgtgcttcatag 29205408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 32273461 - 32273524
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgac 97  Q
    ||||||||||  ||||||||||||||| | |||||||| || ||||| | ||||||||||||||    
T  32273461 ctatgaagcaccgacactccttggatttgtcgtgtccccgtatcggatacgtgtcgtgtccgac 32273524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 35161155 - 35161092
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgac 97  Q
    |||||||||| |||||||  | |||||||| |||| || |||||||||| ||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgac 35161092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 42640588 - 42640553
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||| ||||||||||||||||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtga 42640553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 21873315 - 21873406
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||||| |||||||| |||||||||| |||||  |||||| | | |||||| | || |||   ||||| |||||||||||||||    
T  21873315 acactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcac--ataatttcactgaattatgtga 21873406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 21929176 - 21929267
Alignment:
Q  47 acactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||||| |||||||| |||||||||| |||||  |||||| | | |||||| | || |||   ||||| |||||||||||||||    
T  21929176 acactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcac--ataatttcactgaattatgtga 21929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 51701338 - 51701284
Alignment:
Q  84 gtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||||| ||||||||    
T  51701338 gtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgt 51701284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 5775304 - 5775341
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtccc 71  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtccc 5775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 7970621 - 7970584
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtc 69  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  7970621 agctatgaagcaaggacacttcttggattaggcgtgtc 7970584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 29205533 - 29205492
Alignment:
Q  64 cgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||| |||||||||||||||||||||| ||| ||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 29205492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| ||||||||||  |||||||||||||||  |||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 13134514 - 13134474
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  13134514 cgacacgacatcgacacatataattacactaaattatgtga 13134474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 17876285 - 17876237
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||  |||||||||||||||||| ||||||  ||||||||||    
T  17876285 ctatgaagcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 18513175 - 18513223
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    |||||||||| ||||||||||  ||||||||||||||  ||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggaca 18513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 28964255 - 28964283
Alignment:
Q  112 gacacttgtaattacactgaattatgtga 140  Q
    |||||||||||||||||||||||||||||    
T  28964255 gacacttgtaattacactgaattatgtga 28964283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 53490732 - 53490784
Alignment:
Q  73 gtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaatta 125  Q
    |||| |||||| |||||||||||||| |||||||| |  ||||||||||||||    
T  53490732 gtgttggacatttgtcgtgtccgacaccgacacgatactgacacttgtaatta 53490784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 241724 - 241580
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| ||||||| || |||||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||  |||||||||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||||       ||||||||||| ||||||||  ||||||||||    
T  241624 tatgtga-tttttccaaattattagctgtgtcggcgtgtcagtgtc 241580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 178
Target Start/End: Original strand, 8564 - 8707
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| | ||||||||||| ||||||||||||| || |||||||||| | |||||||||| ||||| ||||||||| || ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaat 8663  T
Q  134 tatgtgannnnnnncaaattattagttgtgtcggtttgtcagtgt 178  Q
    |||||||       ||||||||||||||||||||  |||||||||    
T  8664 tatgtga-tattttcaaattattagttgtgtcggcatgtcagtgt 8707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 71855 - 71749
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||  ||||||||| ||||||| |||||||| |||||||||| |||| |||||||||| ||||||||||  |||||| |||||||||||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaat 71756  T
Q  134 tatgtga 140  Q
    | |||||    
T  71755 tgtgtga 71749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 53299 - 53204
Alignment:
Q  45 ggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||| |||||||||  |||||||| |||||||||| ||||| ||||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  53299 ggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 13523 - 13386
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| ||||||||||||||||||| |||||| |||||| |||  ||||||||||||||| ||||||     |||| ||||||||| ||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac-----cgacccttgtaattgcactgaatta 13429  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||       ||||||||||||||||||||  ||||||||||    
T  13428 tgtga-ttttctcaaattattagttgtgtcggcgtgtcagtgtc 13386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 21804 - 21941
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| ||||||||||||||||||| |||||| |||||| |||  ||||||||||||||| ||||||     |||| ||||||||| ||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac-----cgacccttgtaattgcactgaatta 21898  T
Q  136 tgtgannnnnnncaaattattagttgtgtcggtttgtcagtgtc 179  Q
    |||||       ||||||||||||||||||||  ||||||||||    
T  21899 tgtga-ttttctcaaattattagttgtgtcggcgtgtcagtgtc 21941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 3059 - 2952
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaa 132  Q
    |||||| |||| |||||||||| ||||||||||||| || |||||| ||| |||||||||| || | ||||||||||  || ||||||||||||||| ||    
T  3059 gctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaa 2960  T
Q  133 ttatgtga 140  Q
    ||||||||    
T  2959 ttatgtga 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 4821 - 4918
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||         ||| |||| | |||||||||||||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 263303 - 263406
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    ||||| || |||||||||| ||||||||||||||   || ||| ||| |||||||||| |||| ||||||||||  ||||||| ||||||||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  136 tgtg 139  Q
    ||||    
T  263403 tgtg 263406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 8720 - 8662
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgt 92  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 23641 - 23535
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 133  Q
    ||||||||||   ||||| || |||||| |||||||||||| |||||||  | |||||||||||| ||| ||||||  ||||||| ||||||||||||||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaat 23542  T
Q  134 tatgtga 140  Q
    |||||||    
T  23541 tatgtga 23535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 23484 - 23444
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  23484 cgacacgacaccgacacttataattacactgaattatgtga 23444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 92940 - 92833
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccga----caacgacacgacatcgacacttgtaattacactg 130  Q
    ||||||||| |||||||||| |||||||||||||||  ||||| ||||||||||||||||||    || | |||| | |  |||||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactg 92841  T
Q  131 aattatgt 138  Q
    ||||||||    
T  92840 aattatgt 92833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 123686 - 123652
Alignment:
Q  106 gacatcgacacttgtaattacactgaattatgtga 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtga 123652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 5926 - 6031
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||| ||| ||||||||||||||| ||||||||| | ||||| |||| ||||||||| ||||| ||| |||||| |||||| | ||||||||||| |||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  135 atgtga 140  Q
     |||||    
T  6026 ttgtga 6031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 9678 - 9782
Alignment:
Q  36 atgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatta 135  Q
    |||||||| |||||||||| ||||||  ||||||||  |||| |||| |||||||||| |||| | |||||||| |||||| | ||||||||||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  136 tgtga 140  Q
     ||||    
T  9778 agtga 9782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 403 - 473
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||||| |||||||||| |||||||| ||||||| |||||||||| | ||||||||||||| ||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

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Target: scaffold0512 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 4973 - 5047
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||||||  ||||||||| ||||||||| |||| || ||||||||| ||||||||||||||| ||||||    
T  4973 aagctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacac 5047  T

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Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 44486 - 44560
Alignment:
Q  66 tgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||| |||| |||||| ||| |||||||| | |||||| | |||||||||||||||||||||    
T  44486 tgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtga 44560  T

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Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 14646 - 14582
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| | ||||||||| ||||||||||||| | |||||||||| |||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgaca 14582  T

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Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 8917 - 8846
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| ||| ||||||  ||||||||||||| | |||||||||| ||||||||||||||| ||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 24155 - 24052
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcgg--acatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactga 131  Q
    |||||||||| |||||||| | ||||||||||||| ||||||||||  ||| |||| |||||||||| ||||||||||  || || |||||||||||| |    
T  24155 ctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacactaa 24058  T
Q  132 attatg 137  Q
    ||||||    
T  24057 attatg 24052  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 8795 - 8690
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaatt 134  Q
    ||||||||||||||||| || |||| |||||||||  ||| ||||||| || ||  ||| ||||  ||||||||| |||||||| |||||| |||||| |    
T  8795 tatgaagcatggacacttctcggataaggcgtgtcttagtatcggacacgtatcacgtctgacatagacacgacaccgacacttataattatactgaact 8696  T
Q  135 atgtga 140  Q
    ||||||    
T  8695 atgtga 8690  T

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Target: scaffold0475 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 3427 - 3363
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgaca 98  Q
    |||||||||| |||||||||| ||||||||||||||||||||||   || ||||| |||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgaca 3363  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 13544 - 13453
Alignment:
Q  33 gctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaatt 124  Q
    ||||||||| | |||||||||| |||||||| || ||||  ||||| | | ||||||||||||||| |||||||||  |||||| |||||||    
T  13544 gctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgaccccgacacatgtaatt 13453  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 23832 - 23794
Alignment:
Q  102 acacgacatcgacacttgtaattacactgaattatgtga 140  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtga 23794  T

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Target: scaffold0697 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 1733 - 1692
Alignment:
Q  64 cgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    ||||||| ||||||||||||||||||||||||||| ||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacac 1692  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 70399 - 70326
Alignment:
Q  32 agctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||| ||||||| | |||||| | ||||||||| |||||  |||||||||| ||||||||||||||| ||||||    
T  70399 agctttgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacac 70326  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 20236 - 20196
Alignment:
Q  100 cgacacgacatcgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  20236 cgacacgacactgacacttgtaattacactgaattatgtga 20196  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 17840 - 17903
Alignment:
Q  65 gtgtcccagtgtcggacatgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacac 128  Q
    |||||||||||||||||| ||||||||||| ||| ||| |||||| || ||| | |||||||||    
T  17840 gtgtcccagtgtcggacacgtgtcgtgtccaacaccgatacgacaccgtcacatataattacac 17903  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 51941 - 51894
Alignment:
Q  35 tatgaagcatggacactccttggattaggcgtgtcccagtgtcggaca 82  Q
    ||||||||||||||| |||| |||||||||||||||| |||| |||||    
T  51941 tatgaagcatggacattcctcggattaggcgtgtcccggtgttggaca 51894  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 45470 - 45541
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaacgacac 105  Q
    |||||||||| | ||| || ||||||||||| |||| | ||||| |||| ||||||||||||||| ||||||    
T  45470 ctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacac 45541  T

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Target: scaffold0083; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  105 cgacatcgacacttgtaattacactgaattatgt 138  Q
    ||||| ||||||||||||||||||||||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 2978 - 3037
Alignment:
Q  34 ctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 93  Q
    |||||||||| |||||||||    |||||||||||  |||||||||||||||||||||||    
T  2978 ctatgaagcacggacactccccatattaggcgtgtttcagtgtcggacatgtgtcgtgtc 3037  T

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Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 130535 - 130506
Alignment:
Q  111 cgacacttgtaattacactgaattatgtga 140  Q
    ||||||||||||||||||||||||||||||    
T  130535 cgacacttgtaattacactgaattatgtga 130506  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 225194 - 225301
Alignment:
Q  31 aagctatgaagcatggacactccttggattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaacgacacgacatcgacacttgtaattacact 129  Q
    |||| |||||||| |||||||||| | |||||||||||||  |||||| ||| | ||| ||||||||| ||||||| |   |||||||| |||||||| |    
T  225194 aagcaatgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgac-acgacaccaacacgacacttataattacatt 225292  T
Q  130 gaattatgt 138  Q
    | |||||||    
T  225293 gtattatgt 225301  T

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