View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14572_high_73 (Length: 204)
Name: NF14572_high_73
Description: NF14572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14572_high_73 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 35 - 199
Target Start/End: Original strand, 6686292 - 6686456
Alignment:
| Q |
35 |
gaccagcaatagcaacagaagaaataacatgaacattggagtcttgtgcaagcagcatgcttaccatcttcattttctcatcagttctaccaataataat |
134 |
Q |
| |
|
||||| ||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6686292 |
gaccaacaatagcaacagaggaaataacattaacattggagtcttgttcaagcaacatgcttaccatcttcattttctcatcagttctaccaataataat |
6686391 |
T |
|
| Q |
135 |
atgatcagattctaagcaattagaactggttgttatcggacgtacacagatctctgctcctcctc |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
6686392 |
atgatcagattctaagcaattagaactggttgttatcagacgtacacagatctttggtcctcctc |
6686456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University