View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14572_low_12 (Length: 518)
Name: NF14572_low_12
Description: NF14572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14572_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 22 - 502
Target Start/End: Complemental strand, 16085505 - 16085025
Alignment:
| Q |
22 |
aaaaagccatattaaaaagatgcagaatatatgagctacaaatgatatcttcataaagaccaaattgaaacaaaacatgcatccaccaacaacagtaaaa |
121 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16085505 |
aaaaagccatattaaaaagatgcagaatatatgagcttcaaatgatatcttcataaagaccaaattgaaacaaaacatgcatccaccaacaacagtaaaa |
16085406 |
T |
|
| Q |
122 |
caagcaataaataaaactgaatgaaactaatactaataaagacatttacatagctcccacgatgatccctagcacttaaactactactaccaatgaaaca |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
16085405 |
caagcaataaataaaactgaatgaaactaatactaataaagacatttacatagctcccatgatgatccctagcacttaaactactactaccaatgaaaca |
16085306 |
T |
|
| Q |
222 |
aaattaagatttaacagaaatgttatttgaattttattcatcaaccatgtacgggaattgtggtaaaatgcggaatatgtggtcgatattgccattgtga |
321 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
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| T |
16085305 |
aaattaagatttaacagaaatgttatttgaattttattcatcaaccatgtacgggaattgtggtaaaatgcggaaaatgtggtcgatattgccgttgtga |
16085206 |
T |
|
| Q |
322 |
tattgttgcaaacacctctgaaaccaagttacactctgaagcacggttacagaaatggaatcaacaccactgaacgcggatgccgccaataattttagaa |
421 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
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| T |
16085205 |
tattgttgcaaacacctctgaaaccaagttacactctgaagcacggttacagaaatggactcaacaccactgaacgcggatgccaccaataattttagaa |
16085106 |
T |
|
| Q |
422 |
aataagttaaccgaatttaatcagatgtgtgggtgtcggaccctaagacgtgtgtgacaccggacacaccttcgaatttaa |
502 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
16085105 |
aataagttaaccgaatttaatcagatgtgtgggtgtcggacactaagacgtgtgtgacaccggacacaccttcgaatttaa |
16085025 |
T |
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