View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14572_low_3 (Length: 723)

Name: NF14572_low_3
Description: NF14572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14572_low_3
NF14572_low_3
[»] chr7 (1 HSPs)
chr7 (21-707)||(32701894-32702577)


Alignment Details
Target: chr7 (Bit Score: 599; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 599; E-Value: 0
Query Start/End: Original strand, 21 - 707
Target Start/End: Complemental strand, 32702577 - 32701894
Alignment:
Q  21 gatctgaccatatttataaagttttaagtttcttatcatttgaatctgtaaagaaagtcaggcgagcgagcaaagttttttcgttccgccacttaaactg 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||    
T  32702577 gatctgaccatatttataaagtat-aagtttcttatcatttgaatctgtaaagaaagtcaggcgggcgagcaaaaatttttcgttccaccacttaaactg 32702479  T
Q  121 ttgtttctactttctagcatgatccaaaaatgtcattccactagattagagacaagaaggagggaaaaacgtgctttgtcttgaacctgacaatcacaaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32702478 ttgtttctactttctagcatgatccaaaaatgtcattccactagattagagacatgaaggagggaaaaacgtgctttgtcttgaacctgacaatcacaaa 32702379  T
Q  221 cacgtgggctttctttcttatctgacaaaacatagcaccagaaaaacctgtatacgttggatatagtttattgttattattgtcttttaatataaataaa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32702378 cacgtgggctttctttcttatctgacaaaacatagcaccagaaaaacctgtatacgttggatatagtttattgttattattgtcttttaatataaataaa 32702279  T
Q  321 tttttgaaacaattttctatggttgctggaaaaatgaaagaaagaagccaagttgtttgtttgcttttatatataagcagcaagcaggaatacgaatccg 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||  | |||| |||||  |    
T  32702278 tttttgaaacaattttctatggttgctggaaaaatgaaagaaagaagccaagttatttgtttgtttttatatataagcaggaa-tacgaatccgaat-tg 32702181  T
Q  421 aattgaattgaagcaaacaataacaatagtggaagattgggaaatccagtaaagttttctccaccatttgccacagacagttcaaacacagaaaatactt 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32702180 aattgaattgaagcaaacaataacaatagtggaagattgggaaatccagtaaagttttctccaccatttgccacagacagttcaaacacagaaaatactt 32702081  T
Q  521 ggatgatattaagttttgatgacatcgatgatattaatgtattttgataagagaaaatattgtacaaataaattaattttgatgagatagaacctaaaga 620  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32702080 ggatggtattaagtttcgatgacatcgatgatattaatgtattttgataagagaaaatattgtacaaataaattaattttgatgagatagaacctaaaga 32701981  T
Q  621 tcagaggaccacagtctctactaatcaaatctattattacattagtatttctatttaattttttcaaagtgtttaatggatgtatct 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32701980 tcagaggaccacagtctctactaatcaaatctattattacattagtgtttctatttaattttttcaaagtgtttaatggatgtatct 32701894  T

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