View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14572_low_54 (Length: 279)
Name: NF14572_low_54
Description: NF14572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14572_low_54 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 2571714 - 2571977
Alignment:
| Q |
1 |
ttcaaagttcaatataaaattaactattactttgtaagtaatacagttaactatttaggatttaattcatatacattgacattgtaaatgtttttcaaac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
2571714 |
ttcaaagttcaatataaaattaactattactttgtaagtaatacaattaactatttaggatttaattcatatacattgacattgtaaatatttttcaaac |
2571813 |
T |
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| Q |
101 |
tgccggttgatcaaaactattggatcgcaatggaaatttggctttggctggctttagctatgtattgtttacgtaaaaggtcatacaagtgtgaattgtg |
200 |
Q |
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||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2571814 |
tgctggttgatcaaaactattggatcgcaatagaaatttggctttggctggctttagctatgtattgtttacgtaaaaggtcatacaagtgtgaattgtg |
2571913 |
T |
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| Q |
201 |
atttattgaaagtatcaaaattaatctcaactacttattgcactcaggaaaatatgaaggaatt |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2571914 |
atttattgaaagtatcaaaattaatctcaactacttattgcactcaggaaaatatgaaggaatt |
2571977 |
T |
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