View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14573_high_11 (Length: 253)
Name: NF14573_high_11
Description: NF14573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14573_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 31651463 - 31651690
Alignment:
| Q |
12 |
atcaaatcaaaacacaatttctaatacaatactattttttgcaaatttccatgttttggtgaaaatcaaaacacaatttccatgtttctttgactgtggt |
111 |
Q |
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| T |
31651463 |
atcaaatcaaaacacaatctctaatacaatactattttttgcaaatttccatgttttggtgaaaa------catcaagcccgt---tctttgactgtggt |
31651553 |
T |
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| Q |
112 |
tccagtaggactataaagaaacgtgtgacaaagtgttagatacgagctacttgttatttttatttacccgcaagacgaagtaaaattaaattaatatagt |
211 |
Q |
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| T |
31651554 |
tccagtaggactataaagaaacgtgtgacaaagtgttagatacgagctacttgttatttttatttactcgcaagacgaagta-----aaattaatatagt |
31651648 |
T |
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| Q |
212 |
gaaagttcagaaactaaattgatagtttattttgagtttcga |
253 |
Q |
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| T |
31651649 |
gaaagttcagaaactaaattgatagtttattttgagtttcga |
31651690 |
T |
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