View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14573_low_15 (Length: 235)
Name: NF14573_low_15
Description: NF14573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14573_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13907950 - 13908173
Alignment:
| Q |
1 |
aaaaatatattggtcatttcactctcaaaatatgcatatgtgtatgttatatatgtgaacacttacatggcttaaacggatatgaagtggattaggtttg |
100 |
Q |
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| T |
13907950 |
aaaaatatattggtcatttcactctcaaaatatgcatatgtgtatgttatatatgtgaacagtgacatgacttaaacggatatgaagtggattagatttg |
13908049 |
T |
|
| Q |
101 |
aagaatcacgaaatatgacaaa--actggaagaaaattctatggtgcagaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgtttttt |
198 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13908050 |
aagaatcacgaaatatgacaaaacactggaagaaaattctagggtgtagaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgtttttt |
13908149 |
T |
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| Q |
199 |
aactgtatgttccttgatgtaatt |
222 |
Q |
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||||||||||||||||||||||| |
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| T |
13908150 |
gactgtatgttccttgatgtaatt |
13908173 |
T |
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