View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14575_low_16 (Length: 273)
Name: NF14575_low_16
Description: NF14575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14575_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 26357940 - 26358177
Alignment:
| Q |
16 |
ataggttctaacataactgaaatatagtttcaatttcatgtttaatagggttcaaatataagcttaatcaccaaattcagctactctagactctggtgtc |
115 |
Q |
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| T |
26357940 |
ataggttctaacataactgaaatatagtttcaatttcatgtttaatagggttcaaatata-gcttaatcacctaattcagctactctagactctg-tgtc |
26358037 |
T |
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| Q |
116 |
gctatcggaatttgatcagaacagaaatcaacgttgatgacaataatgatttttgacaacacataaactcgcagccaattccccttatttttgtttttcg |
215 |
Q |
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|||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26358038 |
gctatcggaatttgatcagaacaggaatcaacattgatgacaataatgattttggacaacacataaactcgcagccaattccccttatttttgtttttca |
26358137 |
T |
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| Q |
216 |
agtgccttgtgattaaaattaacagattcaattttaatgt |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
26358138 |
agtgccttgtgattaaaattaacagattcaattttaatgt |
26358177 |
T |
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