View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14575_low_17 (Length: 271)
Name: NF14575_low_17
Description: NF14575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14575_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 44166535 - 44166777
Alignment:
| Q |
19 |
acattattagtattacctcgccaaattcgaattgtcttatcctcagaaccactgcacaccaaatcagataccacagccaaacacaatatagactttgtgt |
118 |
Q |
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| T |
44166535 |
acattattagtattacctcgccaaattcgaattgtcttatcctcagaaccactgcacaccaaatcagaaaccacagccaaacacaatatagactttgtgt |
44166634 |
T |
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| Q |
119 |
gaccacgtagagcacctatgactatcaaattaccattttcacctttttcagataccaatattgatctatcacatgcaccggaatacaaaaccgaaccgtc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44166635 |
gaccacgtagagcacctatgactatcaaattaccattttcacctttttcagataccaatattgatctatcacatgcaccggaatacaaaaccgaaccgtc |
44166734 |
T |
|
| Q |
219 |
actgttaagagccaatgcattaatcccagatctgtgctcctcc |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
44166735 |
actgttaagagccaatgcattaatcccagatctgtgcttctcc |
44166777 |
T |
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