View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14575_low_7 (Length: 389)

Name: NF14575_low_7
Description: NF14575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14575_low_7
NF14575_low_7
[»] scaffold0197 (2 HSPs)
scaffold0197 (118-388)||(19189-19458)
scaffold0197 (118-389)||(14332-14603)
[»] scaffold0028 (1 HSPs)
scaffold0028 (118-389)||(148979-149249)
[»] chr8 (29 HSPs)
chr8 (118-389)||(35745183-35745453)
chr8 (118-389)||(10684287-10684558)
chr8 (143-389)||(39784845-39785091)
chr8 (143-389)||(25328301-25328545)
chr8 (148-389)||(6311121-6311359)
chr8 (148-389)||(7289949-7290188)
chr8 (312-389)||(10689178-10689254)
chr8 (312-389)||(18853203-18853279)
chr8 (312-389)||(33037841-33037917)
chr8 (312-389)||(36979363-36979439)
chr8 (235-389)||(30655551-30655708)
chr8 (312-389)||(18870597-18870673)
chr8 (328-389)||(26287902-26287963)
chr8 (328-389)||(26301159-26301220)
chr8 (328-389)||(26313153-26313214)
chr8 (235-389)||(4760110-4760263)
chr8 (328-389)||(1261989-1262050)
chr8 (327-389)||(26403265-26403328)
chr8 (330-389)||(9765854-9765914)
chr8 (327-389)||(4696631-4696694)
chr8 (328-389)||(4456028-4456090)
chr8 (328-389)||(31071264-31071326)
chr8 (331-389)||(7412344-7412403)
chr8 (328-389)||(19175789-19175851)
chr8 (327-389)||(5702518-5702581)
chr8 (327-389)||(19752429-19752492)
chr8 (327-389)||(23799612-23799675)
chr8 (332-389)||(43079879-43079937)
chr8 (332-389)||(43082250-43082308)
[»] chr5 (37 HSPs)
chr5 (118-389)||(2785167-2785437)
chr5 (118-389)||(31401873-31402143)
chr5 (118-389)||(31397016-31397286)
chr5 (118-389)||(33791108-33791378)
chr5 (118-389)||(33767971-33768241)
chr5 (116-389)||(37561467-37561742)
chr5 (118-389)||(37556645-37556918)
chr5 (117-389)||(28807595-28807869)
chr5 (168-389)||(43592120-43592341)
chr5 (148-389)||(1457185-1457423)
chr5 (148-389)||(27444793-27445032)
chr5 (148-389)||(27449637-27449876)
chr5 (148-389)||(43598547-43598786)
chr5 (148-389)||(43604039-43604278)
chr5 (148-389)||(43609531-43609770)
chr5 (143-389)||(15044507-15044748)
chr5 (168-389)||(30631249-30631468)
chr5 (253-389)||(31180141-31180276)
chr5 (328-389)||(38192174-38192235)
chr5 (328-389)||(38219399-38219460)
chr5 (328-389)||(35387663-35387724)
chr5 (328-388)||(24135849-24135909)
chr5 (328-389)||(9353367-9353429)
chr5 (328-389)||(36932385-36932447)
chr5 (327-389)||(17003995-17004058)
chr5 (328-389)||(10281751-10281813)
chr5 (328-389)||(15464532-15464594)
chr5 (329-389)||(11917007-11917068)
chr5 (327-389)||(28832258-28832321)
chr5 (332-389)||(4410243-4410301)
chr5 (327-389)||(42127445-42127508)
chr5 (328-389)||(14520230-14520292)
chr5 (332-389)||(15552466-15552524)
chr5 (332-385)||(27910675-27910729)
chr5 (332-389)||(31179371-31179429)
chr5 (332-389)||(31542955-31543013)
chr5 (332-389)||(31545301-31545359)
[»] scaffold0259 (1 HSPs)
scaffold0259 (118-389)||(2274-2544)
[»] chr6 (25 HSPs)
chr6 (118-389)||(6005209-6005479)
chr6 (118-389)||(16838536-16838806)
chr6 (118-373)||(5343272-5343527)
chr6 (118-389)||(33330468-33330740)
chr6 (117-389)||(33335965-33336238)
chr6 (143-389)||(28155592-28155837)
chr6 (118-389)||(6438294-6438563)
chr6 (143-389)||(14737599-14737843)
chr6 (143-389)||(14742459-14742702)
chr6 (143-389)||(28184320-28184567)
chr6 (146-389)||(22010720-22010960)
chr6 (118-389)||(11856765-11857036)
chr6 (329-389)||(5674805-5674865)
chr6 (328-389)||(5757513-5757575)
chr6 (328-389)||(21356036-21356098)
chr6 (327-389)||(10077200-10077263)
chr6 (327-389)||(31086508-31086571)
chr6 (327-389)||(31979512-31979575)
chr6 (328-389)||(4629954-4630016)
chr6 (172-276)||(30125940-30126044)
chr6 (327-389)||(5572276-5572339)
chr6 (327-389)||(31936586-31936649)
chr6 (332-389)||(12195515-12195573)
chr6 (340-389)||(21801379-21801429)
chr6 (359-389)||(22709050-22709080)
[»] chr3 (43 HSPs)
chr3 (116-389)||(8512005-8512279)
chr3 (118-389)||(8516887-8517159)
chr3 (118-389)||(32475276-32475547)
chr3 (118-389)||(32480133-32480405)
chr3 (118-389)||(2677110-2677382)
chr3 (118-376)||(10207725-10207983)
chr3 (118-389)||(2672954-2673226)
chr3 (176-389)||(24967957-24968169)
chr3 (143-389)||(18656251-18656497)
chr3 (146-389)||(22173218-22173458)
chr3 (172-389)||(7167092-7167306)
chr3 (172-389)||(2671621-2671836)
chr3 (312-389)||(8739098-8739174)
chr3 (312-389)||(9091336-9091412)
chr3 (312-389)||(28503899-28503975)
chr3 (312-389)||(40372830-40372906)
chr3 (328-389)||(8477363-8477424)
chr3 (328-389)||(1305949-1306010)
chr3 (328-389)||(26928626-26928687)
chr3 (328-389)||(8370511-8370573)
chr3 (328-389)||(27974977-27975039)
chr3 (328-389)||(27986471-27986533)
chr3 (327-389)||(18552908-18552971)
chr3 (327-389)||(21711222-21711285)
chr3 (328-389)||(16264350-16264412)
chr3 (328-389)||(25795781-25795843)
chr3 (328-389)||(30709815-30709877)
chr3 (328-389)||(32143321-32143383)
chr3 (328-389)||(33386691-33386753)
chr3 (329-389)||(36029094-36029155)
chr3 (327-389)||(1417515-1417578)
chr3 (331-389)||(1736330-1736389)
chr3 (327-389)||(3716027-3716090)
chr3 (327-389)||(40592807-40592870)
chr3 (328-389)||(27452958-27453020)
chr3 (327-389)||(6794738-6794801)
chr3 (327-389)||(26298987-26299050)
chr3 (327-389)||(37466290-37466353)
chr3 (327-389)||(47923931-47923994)
chr3 (327-389)||(48438213-48438276)
chr3 (332-389)||(38210571-38210629)
chr3 (332-389)||(50494200-50494258)
chr3 (328-375)||(39153357-39153405)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-389)||(181987-182258)
[»] chr7 (33 HSPs)
chr7 (118-389)||(16879864-16880135)
chr7 (118-389)||(16884720-16884991)
chr7 (118-389)||(24261346-24261617)
chr7 (118-389)||(24266225-24266496)
chr7 (116-389)||(21812261-21812534)
chr7 (118-389)||(19992104-19992375)
chr7 (143-389)||(24024349-24024594)
chr7 (143-389)||(12406150-12406393)
chr7 (143-389)||(31109606-31109849)
chr7 (143-389)||(12396730-12396973)
chr7 (143-389)||(4866548-4866792)
chr7 (172-389)||(20357582-20357797)
chr7 (288-389)||(2057929-2058027)
chr7 (328-389)||(18408764-18408825)
chr7 (328-389)||(21639809-21639870)
chr7 (328-389)||(1533479-1533540)
chr7 (328-389)||(18413641-18413701)
chr7 (328-389)||(21646007-21646068)
chr7 (329-389)||(21983285-21983346)
chr7 (327-389)||(9190043-9190106)
chr7 (327-389)||(20284088-20284151)
chr7 (327-389)||(29159802-29159865)
chr7 (327-389)||(2580389-2580452)
chr7 (327-389)||(33332485-33332548)
chr7 (327-389)||(46516345-46516408)
chr7 (327-389)||(49091660-49091723)
chr7 (328-389)||(44848719-44848781)
chr7 (327-389)||(2647731-2647794)
chr7 (327-389)||(9185200-9185263)
chr7 (331-389)||(28617260-28617319)
chr7 (332-389)||(31155911-31155969)
chr7 (327-387)||(35960815-35960876)
chr7 (328-375)||(8153466-8153514)
[»] chr1 (31 HSPs)
chr1 (118-389)||(43988487-43988759)
chr1 (118-389)||(39445292-39445562)
chr1 (118-389)||(25445112-25445382)
chr1 (118-389)||(1055034-1055304)
chr1 (143-389)||(44023896-44024140)
chr1 (235-389)||(24787399-24787551)
chr1 (143-389)||(41398055-41398298)
chr1 (328-389)||(24202804-24202865)
chr1 (312-389)||(41390567-41390643)
chr1 (328-389)||(19358878-19358939)
chr1 (328-389)||(19361467-19361528)
chr1 (328-389)||(19380107-19380168)
chr1 (327-389)||(47703971-47704034)
chr1 (328-389)||(19072928-19072990)
chr1 (328-389)||(19120818-19120880)
chr1 (328-389)||(26644932-26644994)
chr1 (143-224)||(41386566-41386646)
chr1 (327-389)||(9476260-9476323)
chr1 (328-389)||(3281708-3281770)
chr1 (327-389)||(775671-775734)
chr1 (327-389)||(13598397-13598460)
chr1 (327-389)||(16124551-16124614)
chr1 (327-389)||(27104407-27104470)
chr1 (327-389)||(29651810-29651873)
chr1 (327-389)||(47098859-47098922)
chr1 (328-385)||(37069770-37069828)
chr1 (358-389)||(21536604-21536635)
chr1 (332-389)||(9459419-9459477)
chr1 (332-389)||(9463246-9463304)
chr1 (328-389)||(13604658-13604720)
chr1 (332-389)||(16226388-16226446)
[»] chr2 (30 HSPs)
chr2 (118-389)||(19344212-19344483)
chr2 (118-389)||(19349070-19349341)
chr2 (118-389)||(32246577-32246850)
chr2 (143-389)||(39812011-39812255)
chr2 (146-389)||(44312647-44312887)
chr2 (17-115)||(996850-996948)
chr2 (218-389)||(14291380-14291550)
chr2 (312-389)||(11098962-11099038)
chr2 (328-389)||(3491751-3491812)
chr2 (312-389)||(9296436-9296512)
chr2 (328-389)||(25398496-25398557)
chr2 (328-389)||(25403634-25403695)
chr2 (327-389)||(8040059-8040122)
chr2 (328-389)||(40738844-40738904)
chr2 (327-389)||(10445479-10445542)
chr2 (331-389)||(13569331-13569390)
chr2 (327-389)||(14699042-14699105)
chr2 (327-389)||(21629943-21630005)
chr2 (327-389)||(34682369-34682432)
chr2 (328-389)||(28259212-28259274)
chr2 (327-389)||(17865202-17865265)
chr2 (327-389)||(20522219-20522282)
chr2 (329-389)||(34388859-34388920)
chr2 (331-389)||(8390185-8390244)
chr2 (358-389)||(25407653-25407684)
chr2 (328-389)||(31056044-31056106)
chr2 (332-389)||(35215586-35215644)
chr2 (332-389)||(35217963-35218021)
chr2 (329-389)||(10707287-10707348)
chr2 (332-388)||(45332181-45332238)
[»] chr4 (29 HSPs)
chr4 (118-389)||(18855519-18855789)
chr4 (118-389)||(3813816-3814086)
chr4 (143-389)||(5732481-5732727)
chr4 (118-389)||(9224430-9224698)
chr4 (143-389)||(9229217-9229460)
chr4 (117-389)||(45347840-45348110)
chr4 (117-389)||(45357319-45357589)
chr4 (148-389)||(51520280-51520519)
chr4 (147-389)||(56146734-56146974)
chr4 (312-389)||(24741926-24742002)
chr4 (312-389)||(29760627-29760703)
chr4 (328-389)||(28468564-28468625)
chr4 (327-389)||(10047378-10047441)
chr4 (327-389)||(36315264-36315327)
chr4 (327-389)||(36329473-36329536)
chr4 (327-389)||(38152474-38152537)
chr4 (327-389)||(39245993-39246056)
chr4 (328-389)||(5396706-5396768)
chr4 (329-387)||(5143260-5143319)
chr4 (327-389)||(5269226-5269289)
chr4 (327-389)||(16623328-16623391)
chr4 (328-389)||(31985669-31985730)
chr4 (327-389)||(24333808-24333871)
chr4 (328-389)||(3796554-3796616)
chr4 (329-386)||(5147678-5147736)
chr4 (332-389)||(16931789-16931847)
chr4 (332-389)||(16934143-16934201)
chr4 (332-389)||(22780373-22780431)
chr4 (332-389)||(44599838-44599896)
[»] scaffold0464 (1 HSPs)
scaffold0464 (118-389)||(155-425)
[»] scaffold0355 (2 HSPs)
scaffold0355 (143-389)||(9665-9907)
scaffold0355 (143-288)||(13-148)
[»] scaffold0135 (1 HSPs)
scaffold0135 (143-389)||(35085-35328)
[»] scaffold0188 (2 HSPs)
scaffold0188 (328-389)||(17987-18048)
scaffold0188 (328-389)||(24080-24141)
[»] scaffold0777 (1 HSPs)
scaffold0777 (118-166)||(6293-6341)
[»] scaffold0140 (1 HSPs)
scaffold0140 (328-389)||(8454-8516)
[»] scaffold0127 (1 HSPs)
scaffold0127 (143-224)||(34136-34216)
[»] scaffold0036 (1 HSPs)
scaffold0036 (329-389)||(85684-85745)
[»] scaffold0479 (1 HSPs)
scaffold0479 (118-200)||(13141-13222)
[»] scaffold0148 (1 HSPs)
scaffold0148 (327-389)||(10728-10791)
[»] scaffold0006 (3 HSPs)
scaffold0006 (327-389)||(5682-5745)
scaffold0006 (327-389)||(2491-2554)
scaffold0006 (328-389)||(133315-133377)
[»] scaffold0098 (1 HSPs)
scaffold0098 (328-389)||(45253-45315)
[»] scaffold0087 (2 HSPs)
scaffold0087 (328-389)||(43996-44058)
scaffold0087 (328-387)||(36869-36929)
[»] scaffold0267 (1 HSPs)
scaffold0267 (332-389)||(271-329)
[»] scaffold0978 (1 HSPs)
scaffold0978 (312-360)||(300-347)


Alignment Details
Target: scaffold0197 (Bit Score: 247; Significance: 1e-137; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 118 - 388
Target Start/End: Complemental strand, 19458 - 19189
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  19458 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 19359  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19358 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaac-a 19260  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaat 388  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19259 aacaccgagcaagattgttgacccagttcagccattgtggcctaatctgggggagagagcagctctccaat 19189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 14603 - 14332
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  14603 tgttgtgaatccggttcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 14504  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14503 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 14405  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14404 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 14332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 149249 - 148979
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  149249 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 149150  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  149149 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaggaaaacgaac-a 149051  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  149050 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatc 148979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 35745183 - 35745453
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35745183 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 35745282  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  35745283 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaaggaaaagaac-a 35745381  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745382 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 35745453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 10684558 - 10684287
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  10684558 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 10684459  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684458 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 10684360  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684359 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 10684287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 39785091 - 39784845
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||| | |||  ||||||| |||||||| ||  |||||||||||||    
T  39785091 aaccttcacaccaatga-aataaaccaaagatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaataacaacaaaacagc 39784993  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaag---catacaagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttga 338  Q
    | ||||| || |||||||||||||||||| ||||| |  |||    || ||||||||| || |||||| ||| |||||||||||||||||||||||||||    
T  39784992 cctaagc-tagtgtatagcaaaaccacac-aagagattccaaagcacaaacaagataagcggtaaaaggaaa-gaacaaaacaccgagcaagattgttga 39784896  T
Q  339 cccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39784895 cccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 39784845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 25328545 - 25328301
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    |||||||||| |||||| ||||||||||||||||| |||| ||||||||| ||||||| | |||  ||||||| |||||||| ||| ||||||||||| |    
T  25328545 aaccttcacaacaatga-aataaatcaatgatgtgcggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaacaaaacaac 25328447  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaag-cataca--agataaacgataaaagaaaacgaacaaaacaccgagcaagattgttga 338  Q
    | |||  ||| |||||||||||||||||| ||||| || |||  |||| |  ||||||||| |||| ||||| ||||||||||||||| |||||||||||    
T  25328446 cctaa--ctagtgtatagcaaaaccacac-aagagataccaaaacataaacgagataaacggtaaaggaaaa-gaacaaaacaccgag-aagattgttga 25328352  T
Q  339 cccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25328351 cccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 25328301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 6311121 - 6311359
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||| | ||||| | |||  |||||||  ||||||| ||| |||||||| |||||  ||    
T  6311121 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtttccaagcaaacaacaacaaagcagccctag 6311218  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||||||||| |||||| |||||  |||||||| | | ||| |||   ||||||||||||||| |||||||||||||||||    
T  6311219 actagtgtatagcaaaaccacactaagagataacaaagcataaacaagataagcaagaaaggaa---gaacaaaacaccgag-aagattgttgacccagt 6311314  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  6311315 tcagccaatatggcctaatctgggggagagagcagctctccaatc 6311359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 148 - 389
Target Start/End: Complemental strand, 7290188 - 7289949
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| || |||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||| | ||| |||||||| |||||  ||    
T  7290188 tcacaccaatga-aataaa-cattgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaaacaaacaacaacaaagcagccctag 7290091  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaagc---atacaagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |   | |||||||||  |||||||| ||  ||||||||||||||| |||||||||||||||||    
T  7290090 actagtgtatagcaaaaccacacaaagagataacaaaccataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagt 7289994  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  7289993 tcagccaatatggcctaatctgggggagagagcagctctccaatc 7289949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 10689254 - 10689178
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10689254 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 10689178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 18853279 - 18853203
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18853279 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 18853203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 33037917 - 33037841
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33037917 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 33037841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 36979363 - 36979439
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36979363 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 36979439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 389
Target Start/End: Original strand, 30655551 - 30655708
Alignment:
Q  235 aaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaa-aacgaacaaaacaccgagcaag 330  Q
    |||||||||  || ||| |||| |||||||||||||  |||| |||||| |||||  |||||||| | | ||| ||| ||| || |||||||| || |||    
T  30655551 aaaacagccctagactagtgtagagcaaaaccacacatagagataacaaagcataaacaagataagcaagaaaggaagaacaaaaaaaacaccaag-aag 30655649  T
Q  331 attgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30655650 attgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 30655708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 18870673 - 18870597
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18870673 gaacaaaacaccaag-aagattgttgacccagttcatccaatatggcctaatctgggggagagagcagctctccaatc 18870597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 26287902 - 26287963
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26287902 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 26287963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 26301159 - 26301220
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26301159 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 26301220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 26313153 - 26313214
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26313153 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 26313214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 389
Target Start/End: Complemental strand, 4760263 - 4760110
Alignment:
Q  235 aaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaaga 331  Q
    |||||||||  || ||| |||| ||||||||||||| ||||| |||||| |||||  |||||||| | | ||| |||   |||||||||| | || ||||    
T  4760263 aaaacagccctagactagtgtagagcaaaaccacacaaagagataacaaagcataaacaagataagcaagaaaggaa---gaacaaaacatcaag-aaga 4760168  T
Q  332 ttgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4760167 ttgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatc 4760110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 1262050 - 1261989
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  1262050 aagattgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctccaatc 1261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 26403328 - 26403265
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  26403328 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 26403265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 9765914 - 9765854
Alignment:
Q  330 gattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 9765854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 4696694 - 4696631
Alignment:
Q  327 caagattgttgacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  4696694 caagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatc 4696631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 4456028 - 4456090
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||| |||| | ||||| |||||||||||||||||||||||||||||||||||    
T  4456028 aagattgctgacccggttcggtccaatatggcctaatctgggggagagagcagctctccaatc 4456090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 31071326 - 31071264
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  31071326 aagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 31071264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 7412344 - 7412403
Alignment:
Q  331 attgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| | ||||| || |||||| |||||||||||||||||||||||||    
T  7412344 attgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatc 7412403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 19175851 - 19175789
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||| | ||||| || ||||||||||||||||||||| ||||||||||    
T  19175851 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatc 19175789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 5702581 - 5702518
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||| |||||||||||||| | ||||||||    
T  5702581 caagattgttgacccagttcggtccaatatgacctaatatgggggagagagcatccctccaatc 5702518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 19752492 - 19752429
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| ||||| | ||||| || |||| ||| |||||||||||||||||||||||    
T  19752492 caagattgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatc 19752429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 23799675 - 23799612
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||| ||| |||||||||||| ||||||||    
T  23799675 caagattgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatc 23799612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 43079937 - 43079879
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  43079937 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 43079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 43082308 - 43082250
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  43082308 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 43082250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 2785167 - 2785437
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  2785167 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 2785266  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  2785267 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaaggaaaagaac-a 2785365  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785366 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 2785437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 31402143 - 31401873
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  31402143 tgttgtgaattcggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 31402044  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31402043 tccaagctaacaacaacaaaacagcctaagcctaatgtaaagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaac-a 31401945  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31401944 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatatgggggagagagcagctctccaatc 31401873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 31397286 - 31397016
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  31397286 tgttgtgaattcggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 31397187  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  31397186 tccaagctaacaacaacaaaacatcctaagcctaatgtaaagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacaaac-a 31397088  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31397087 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 31397016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 33791108 - 33791378
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33791108 tgttgtgaatccggctcaactaatgaaccttcacatcaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 33791207  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||| |||| |    
T  33791208 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacatatagagctaacaagcatacaagataaacgataaaaggaaaagaac-a 33791306  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33791307 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggaaagagcagctctccaatc 33791378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 33767971 - 33768241
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||    
T  33767971 tgttgtgaatccggctcaactaatgaaccttcacatcaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatgacc 33768070  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||| ||| |||| |    
T  33768071 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacatatagagctaacaagcatacaggataaacgataaaaggaaaagaac-a 33768169  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33768170 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggggagagcagctctccaatc 33768241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 116 - 389
Target Start/End: Complemental strand, 37561742 - 37561467
Alignment:
Q  116 actgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatg 214  Q
    |||||||||||||||| ||||||||| || ||||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||||| ||| |||||||    
T  37561742 actgttgtgaatccggttcaactaatcaaaccttcacaccaatgataataaaccaaagatgtgtggagcaagtgatagtgataatctatgagagcaaatg 37561643  T
Q  215 gcctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcat--acaagataaacgataaaagaaaacg 312  Q
    |||||||||||||| |||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||  |||||||||||| |||| | ||| |    
T  37561642 gcctccaagctaacaacaacaaaacagcctatgacttgtgtatagcaaaaccacactaagagctaacaagcataaacaagataaacggtaaatggaaa-g 37561544  T
Q  313 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37561543 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 37561467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 37556918 - 37556645
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaac-cttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||||| ||| |||||||||    
T  37556918 tgttgtgaatccggttcaactaatcaaatcttcacaccaatgataataaaccaaagatgtgtggagcaagtgatagtgataatctatgagagcaaatggc 37556819  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcat--acaagataaacgataaaagaaaacgaa 314  Q
    |||||||||||| |||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||  |||||||||||| |||| | ||| |||    
T  37556818 ctccaagctaacaacaacaaaacagcctatgacttgtgtatagcaaaaccacactaagagctaacaagcataaacaagataaacggtaaatggaaa-gaa 37556720  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37556719 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 37556645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 117 - 389
Target Start/End: Complemental strand, 28807869 - 28807595
Alignment:
Q  117 ctgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatgg 215  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  |||||||    
T  28807869 ctgttgtgaatccggttcaactaatgaaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatgg 28807771  T
Q  216 cctccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaa--ccacactaagagctaacaagcata--caagataaacgataaaagaaaa 310  Q
    | ||||||| ||| |||||||| ||||| ||||| || ||||||||||||  |||| | |||||||||||||||||  ||||||||||| |||||| |||    
T  28807770 cttccaagcaaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaaaccactcaaagagctaacaagcataaacaagataaacggtaaaaggaaa 28807673  T
Q  311 cgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28807672 -gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 28807595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 168 - 389
Target Start/End: Original strand, 43592120 - 43592341
Alignment:
Q  168 caatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaacca 267  Q
    ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| |||||  || ||| |||||||||||||||    
T  43592120 caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaacca 43592219  T
Q  268 cactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatc 364  Q
    ||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  43592220 cacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatc 43592316  T
Q  365 tgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||    
T  43592317 tgggggagagagcagctctccaatc 43592341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 148 - 389
Target Start/End: Complemental strand, 1457423 - 1457185
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| |||||  ||    
T  1457423 tcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctag 1457326  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||   | ||| |||   ||||||||||||||| |||||||||||||||||    
T  1457325 actagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagaaagaaaggaa---gaacaaaacaccgag-aagattgttgacccagt 1457230  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  1457229 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 1457185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 27444793 - 27445032
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||| ||||||| |||||||| ||| |||||| | |||||  ||    
T  27444793 tcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagtacaaatggtctccaagcaaacaacaacatagcagccctag 27444890  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| |||||||||||||||||    
T  27444891 actagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagt 27444987  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||| |||| | |||||||||||||||||||||||||||||||||    
T  27444988 tcaggcaatatagcctaatctgggggagagagcagctctccaatc 27445032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 27449637 - 27449876
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||| ||||||| ||| ||||| | ||||| | |||| ||||||| |||||||| ||| |||||| | |||||  ||    
T  27449637 tcacaccaatga-aataaa-caatgatatgtggagcaagagatagtggtaatcaatgagtacaaatggtctccaagcaaacaacaacatagcagccctag 27449734  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| |||||||||||||||||    
T  27449735 actagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagt 27449831  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  27449832 tcagccaatatagcctaatctgggggagagagcagctctccaatc 27449876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 43598547 - 43598786
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||| ||| |||||||| ||| |||||||| |||||  ||    
T  43598547 tcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctag 43598644  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| ||||||||||  |||||    
T  43598645 actagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttggtccagt 43598741  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  43598742 tcagccaatatggcctaatctgggggagagagcagctctccaatc 43598786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 43604039 - 43604278
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||| ||| |||||||| ||| |||||||| |||||  ||    
T  43604039 tcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctag 43604136  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| ||||||||||  |||||    
T  43604137 actagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttggtccagt 43604233  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  43604234 tcagccaatatggcctaatctgggggagagagcagctctccaatc 43604278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 43609531 - 43609770
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||| ||| |||||||| ||| |||||||| |||||  ||    
T  43609531 tcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctag 43609628  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| ||||||||||  |||||    
T  43609629 actagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttggtccagt 43609725  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  43609726 tcagccaatatggcctaatctgggggagagagcagctctccaatc 43609770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 15044507 - 15044748
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| ||||   |||||| |||| ||| ||||||||| | ||||| | |||  ||||||| |||||| | ||| |||||||||||||    
T  15044507 aaccttcacaccaatga-aata---caatgacgtgtagagcaagtgatagtggtaatcaatgagaacaaatggtctccaaaccaacaacaacaaaacagc 15044602  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgac 339  Q
    |  || ||| |||||||||||||||||| ||||| |  ||| |||||  |||||||| | | ||||| ||  |||||||||||| || ||||||||||||    
T  15044603 cctagactagtgtatagcaaaaccacac-aagagattccaaagcataaacaagataagcaagaaaaggaa--gaacaaaacaccaag-aagattgttgac 15044698  T
Q  340 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15044699 ccagttcagccaatatggcctaatatgggggagagagcagctctccaatc 15044748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 168 - 389
Target Start/End: Original strand, 30631249 - 30631468
Alignment:
Q  168 caatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaacca 267  Q
    ||||||||||||||| ||| ||||| | ||||||| |||  |||||||  | ||||| ||| ||||||||||||||  || ||| |||||||||||| ||    
T  30631249 caatgatgtgtggagcaagagatagtggtaatctatgagaacaaatggttttcaagc-aacaacaacaaaacagccctagactagtgtatagcaaaatca 30631347  T
Q  268 cactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatc 364  Q
    ||   | || |||||| |||||  ||||||||   | ||| |||   |||||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  30631348 catatatagataacaaagcataaacaagataagtaagaaaggaa---gaacaaaacaccaag-aagattgttgactcagttcagccaatgtggcctaatc 30631443  T
Q  365 tgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||    
T  30631444 tgggggagagagcagctctccaatc 30631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 31180141 - 31180276
Alignment:
Q  253 tgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgata-aaagaaaacgaacaaaacaccgagcaagattgttgacccagttcag 348  Q
    |||||||||||||||||| ||||| |||||| |||||  ||||||||  || | |||||||  |||||||||||| || |||||||||||||||||||||    
T  31180141 tgtatagcaaaaccacacaaagagataacaaagcataaacaagataa--gaaagaaagaaa--gaacaaaacaccaag-aagattgttgacccagttcag 31180235  T
Q  349 ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  31180236 ccaatatggcctaatctgggggagagagcagctctccaatc 31180276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 38192174 - 38192235
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38192174 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 38192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 38219399 - 38219460
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38219399 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 38219460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 35387663 - 35387724
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  35387663 aagattgttgacccaattcagccaatatggcctaatctgggggagagagcagctctccaatc 35387724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 24135849 - 24135909
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaat 388  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  24135849 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctatccaat 24135909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 9353429 - 9353367
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  9353429 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 9353367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 36932447 - 36932385
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  36932447 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 36932385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 17004058 - 17003995
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||||||||||||||||||||||| |||||    
T  17004058 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatc 17003995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 10281751 - 10281813
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||| ||||||||||||||||||||||||||||    
T  10281751 aagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatc 10281813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 15464532 - 15464594
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| ||  |||||||||||||||||||||||||||||||    
T  15464532 aagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaatc 15464594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 11917068 - 11917007
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||| | ||||| || |||||| |||||||||||||||||||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatc 11917007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 28832258 - 28832321
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  28832258 caagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatc 28832321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 4410301 - 4410243
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagctctccaatc 4410243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 42127508 - 42127445
Alignment:
Q  327 caagattgttgacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | | ||| || ||||||||||||||||||||||| | ||||||    
T  42127508 caagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccccccaatc 42127445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 14520230 - 14520292
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || |||||||| |||| |||||||||||| |||||    
T  14520230 aagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatc 14520292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 15552524 - 15552466
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  15552524 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 15552466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 27910729 - 27910675
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctcc 385  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||||||||||    
T  27910729 ttgttgacccagttcggtccaaattgacctaatctgggggagagagcagctctcc 27910675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 31179371 - 31179429
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  31179371 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 31179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 31543013 - 31542955
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  31543013 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 31542955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 31545359 - 31545301
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  31545359 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 31545301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 2544 - 2274
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||    
T  2544 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgataaagataatccatgagtgcaaatggcc 2445  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  2444 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaggaaaacgaac-a 2346  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2345 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatc 2274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 6005209 - 6005479
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6005209 tgttgtaaatccggctcaactaatgaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 6005308  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  6005309 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaaggaaaagaac-a 6005407  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005408 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 6005479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 16838536 - 16838806
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  16838536 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaaccaatgatatgtggagcaagtgatagagataatctatgagtgcaaatggcc 16838635  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaacaa 317  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16838636 ttcaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaac-a 16838734  T
Q  318 aacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16838735 aacaccgagcaagattgttgacccagttcagccaatgtggcttaatctgggggagagagcagctctccaatc 16838806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 118 - 373
Target Start/End: Original strand, 5343272 - 5343527
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  5343272 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataagtcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 5343371  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagc-aaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  5343372 tccaagctaacaacaacaaaacagcctaagcctaaagtatagcaaaaaccacactaagagctaacaagcatacaagataaacgataaaggaaaacgaac- 5343470  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggaga 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5343471 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggaga 5343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 33330740 - 33330468
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33330740 tgttgtgaatccggctcaactaatgaaccttcacaccaattagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 33330641  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagc-aaaaccacactaagagctaacaagcat-acaagataaacgat-aaaagaaaacgaa 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||    
T  33330640 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaaccacactaagagctaacaagcataacaagataaaccatgaaaagaaaa-gaa 33330542  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330541 c-aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 33330468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 117 - 389
Target Start/End: Complemental strand, 33336238 - 33335965
Alignment:
Q  117 ctgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33336238 ctgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggc 33336139  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatag-caaaaccacactaagagctaacaagcat-acaagataaacgat-aaaagaaaacga 313  Q
    |||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||    
T  33336138 ctccaaactaacaacaacaaaacagcctaagcctaatgtatagtaaaaaccacactaagagctaacaagcataacaagataaaccatgaaaagaaaa-ga 33336040  T
Q  314 acaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33336039 ac-aaacaccaagcaagattgttgacccagttcagccaatgtgacctaatctgggggagagagcagctctccaatc 33335965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 28155837 - 28155592
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||  |||||| ||||||||||||||| ||||||||| ||||||| | ||| |||||||| || ||||||||| |||||||||||||    
T  28155837 aaccttcacaccaatgc-aataaa-caatgatgtgtggagcaagtgatagtgataatcaatgagagcaaatggtcttcaagctaacaacaacaaaacagc 28155740  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacc 340  Q
    ||| | ||  ||||||||||||||||||||||||||||||||||||  ||||||||||| |||| | ||| |||||||||||||| ||||||||||||||    
T  28155739 ctatgacttgtgtatagcaaaaccacactaagagctaacaagcataaacaagataaacggtaaatggaaa-gaacaaaacaccgaacaagattgttgacc 28155641  T
Q  341 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28155640 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 28155592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 6438294 - 6438563
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||| ||||| || || || |||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||| | |||  | ||||||     
T  6438294 tgttgtgattccggttctacaaacgaaccttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcaatgagaaccaatggct 6438391  T
Q  218 tccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| |||    
T  6438392 tccaagcaaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaa 6438488  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6438489 caaaacaccgagcaagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 6438563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 14737843 - 14737599
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  ||||||| |||||||| ||| |||||||||||||    
T  14737843 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagc 14737746  T
Q  243 ctaagcctaatgtatagcaaaaccacactaa-gagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgac 339  Q
    |  || ||| |||||||||||||||||| || ||| || ||| ||| | |||||||| || |||||||||  ||||||||||||||| |||||||||||     
T  14737745 cctagactagtgtatagcaaaaccacacaaaagagataccaaagcaaaacaagataagcggtaaaagaaa--gaacaaaacaccgag-aagattgttgat 14737649  T
Q  340 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14737648 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 14737599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 14742702 - 14742459
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  ||||||| ||||||||  || |||||||||||||    
T  14742702 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcatacaacaacaaaacagc 14742605  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacc 340  Q
    |  || ||| |||||||||||||||||| ||||| || ||| ||| | |||||||| || |||||||||  ||||||||||||||| |||||||||||||    
T  14742604 cctagactagtgtatagcaaaaccacacaaagagatatcaaagcaaaacaagataagcggtaaaagaaa--gaacaaaacaccgag-aagattgttgacc 14742508  T
Q  341 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||    
T  14742507 cagttcagccaatatgacctaatttgggggagagagcagctctccaatc 14742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 28184320 - 28184567
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaa--tggcctccaagctaaccacaacaaaaca 240  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  ||||  ||| |||||||| ||| |||||||||||    
T  28184320 aaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaaaatggtctccaagcaaacaacaacaaaaca 28184418  T
Q  241 gcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttg 337  Q
    |||  || ||| |||||||||||||||||| ||||| |  ||| |||||  |||||||| || |||||  ||| ||||||||||||||| ||||||||||    
T  28184419 gccctagactagtgtatagcaaaaccacac-aagagattccaaagcataaacaagataagcggtaaaaagaaa-gaacaaaacaccgag-aagattgttg 28184515  T
Q  338 acccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28184516 acccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 28184567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 146 - 389
Target Start/End: Complemental strand, 22010960 - 22010720
Alignment:
Q  146 cttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagccta 245  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| | |||      
T  22010960 cttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagccgccct 22010863  T
Q  246 agcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccag 343  Q
    || | | |||||||||||||||||| ||||| || ||| ||| | |||||||| ||||||||| ||  ||||||||||||||| ||||||||||||||||    
T  22010862 agacaagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccag 22010766  T
Q  344 ttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  22010765 ttcagccaatatggcctaatctgggggagagagcagctctccaatc 22010720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 11856765 - 11857036
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| ||||  ||  ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |    
T  11856765 tgttgtgaatccggttcaaaaaaaaaaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtc 11856862  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaac-aagc-atacaagataaacgataaaa-gaaaacgaa 314  Q
    ||||||| ||| ||||||||||||||  || ||| |||||||||||||||||| ||||| || | |||| | |||||| || |||||||| ||| |  ||    
T  11856863 tccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagacaagcgataaaaggaagaacaa 11856962  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
     |||||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  11856963 aaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatc 11857036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 5674865 - 5674805
Alignment:
Q  329 agattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5674865 agattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 5674805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 5757575 - 5757513
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  5757575 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 5757513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 21356036 - 21356098
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || |||||||||| |||||||||||||||||||||    
T  21356036 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatc 21356098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 10077263 - 10077200
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| ||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  10077263 caagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatc 10077200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 31086571 - 31086508
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||| ||||| ||  ||||||| |||||||||||| ||||||||||    
T  31086571 caagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatc 31086508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 31979512 - 31979575
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||||||||||| ||||||||    
T  31979512 caagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctccaatc 31979575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 4629954 - 4630016
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| |||||||| ||||| || |||||||| ||| |||||||||||||||||||    
T  4629954 aagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatc 4630016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 30126044 - 30125940
Alignment:
Q  172 gatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaac-aaaacagcctaagcctaatgtatagcaaaaccacac 270  Q
    ||||||||||| ||| | ||| ||||||||| |||  ||||||| |||||||||||| ||||| |||||||||  || ||| |||| |||||||||||||    
T  30126044 gatgtgtggagcaagaggtagtgataatctatgagc-caaatggtctccaagctaactacaacaaaaacagccctagactagtgtagagcaaaaccacac 30125946  T
Q  271 taagag 276  Q
     |||||    
T  30125945 aaagag 30125940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 5572339 - 5572276
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| ||| | ||||| || |||||||| |||||||||||||| ||||||||    
T  5572339 caagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatc 5572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 31936586 - 31936649
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| ||||| | ||||| || |||| |||||| ||||||||||||||||||||    
T  31936586 caagattgttgacctagttcggtccaatatgacctagtctgggagagagagcagctctccaatc 31936649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 12195515 - 12195573
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  12195515 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 12195573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 21801429 - 21801379
Alignment:
Q  340 ccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| ||||| || ||||||||||||||| ||||||||||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctccaatc 21801379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 359 - 389
Target Start/End: Original strand, 22709050 - 22709080
Alignment:
Q  359 ctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||    
T  22709050 ctaatctgggggagagagcagctctccaatc 22709080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 116 - 389
Target Start/End: Original strand, 8512005 - 8512279
Alignment:
Q  116 actgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatgg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  8512005 actgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagagcaaatgg 8512104  T
Q  216 cctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagat-aaacgataaaagaaaacgaa 314  Q
    | ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  8512105 cttccaagctaacaacaacaaaacagcctaagcctaatgtgtagcacaaccacactaagagttaacaagcatacaagataaaacgataaacgaaaacgaa 8512204  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8512205 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 8512279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 8516887 - 8517159
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||     
T  8516887 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagagcaaatggct 8516986  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagat-aaacgataaaagaaaacgaaca 316  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  8516987 tccaagctaacaacaacaaaacagcctaagcctaatgtgtagcacaaccacactaagagttaacaagcatacaagataaaacgataaacgaaaacgaaca 8517086  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8517087 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 8517159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 32475276 - 32475547
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  32475276 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 32475375  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    ||||| |||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32475376 tccaaactaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 32475474  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32475475 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 32475547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 32480133 - 32480405
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatc-aatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  32480133 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatccaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggc 32480232  T
Q  217 ctccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaac 315  Q
    |||||| |||| || |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32480233 ctccaaactaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaac 32480331  T
Q  316 aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32480332 aaaacaccaaccaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 32480405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 2677382 - 2677110
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  2677382 tgttgtgaatccggctcaactaatgaaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagagcaaatggc 2677283  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcat-acaagataaacgat-aaaagaaaacgaa 314  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||    
T  2677282 ctccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcataacaagataaaccatgaaaagaaaa-gaa 2677184  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2677183 c-aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 2677110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 118 - 376
Target Start/End: Original strand, 10207725 - 10207983
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  10207725 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcc 10207824  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcat-acaagataaacgat-aaaagaaaacgaac 315  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  10207825 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcataacaagataaaccatgaaaagaaaa-gaac 10207923  T
Q  316 aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagag 376  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10207924 -aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagag 10207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 2673226 - 2672954
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  2673226 tgttgtgaatccggctcaactaatgaaaccttcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagagtaaatggc 2673127  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcat-acaagataaacgat-aaaagaaaacgaa 314  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||    
T  2673126 ctccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcataacaagataaaccatgaaaagaaaa-gaa 2673028  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2673027 c-aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 2672954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 176 - 389
Target Start/End: Original strand, 24967957 - 24968169
Alignment:
Q  176 tgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaaga 275  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24967957 tgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaaga 24968056  T
Q  276 gctaacaagcatacaagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagaga 375  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  24968057 gctaacaagcatacaagataaacgataaaagaaaacgaac-aaacaccgagcaagattgttgacccagttcagccaatgtggcttaattttggggagaga 24968155  T
Q  376 gcagctctccaatc 389  Q
    | ||||||||||||    
T  24968156 gtagctctccaatc 24968169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 18656251 - 18656497
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| ||||   ||||||||||||||| ||||||| | | ||||| | |||  ||||||| |||||||||||| |||||||||||||    
T  18656251 aaccttcacaccaatgaaaata---caatgatgtgtggagcaagtgatggtggtaatcaatgagaacaaatggtctccaagctaacaacaacaaaacagc 18656347  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaa-gcatacaagataaacgataaaagaaa--acgaacaaaacaccgagcaagattgttga 338  Q
    | ||||| || ||||||| |||||||||| |||||||||||| ||| |||||||||||| |||| ||||  || || ||||||| || ||||||||||||    
T  18656348 cctaagc-tagtgtatagaaaaaccacacaaagagctaacaaagcaaacaagataaacggtaaaggaaagaacaaaaaaaacactgaacaagattgttga 18656446  T
Q  339 cccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18656447 cccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 18656497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 146 - 389
Target Start/End: Complemental strand, 22173458 - 22173218
Alignment:
Q  146 cttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagccta 245  Q
    |||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| ||||||||||||||      
T  22173458 cttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccct 22173361  T
Q  246 agcctaatgtatagcaaaaccacactaagagctaacaa-gcatac-aagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccag 343  Q
    || ||| |||||||||||||||||| ||||| || ||| ||| |  ||||||| || |||||| ||  ||||||||||||||| ||||||||||||||||    
T  22173360 agactagtgtatagcaaaaccacacaaagagataccaaagcaaaataagataagcggtaaaaggaa--gaacaaaacaccgag-aagattgttgacccag 22173264  T
Q  344 ttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  22173263 ttcagccaatatggcctaatctgggggagagagcagctctccaatc 22173218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 389
Target Start/End: Original strand, 7167092 - 7167306
Alignment:
Q  172 gatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacact 271  Q
    ||||||||||| ||| ||||| | ||||||| |||   ||||||  ||||||| ||| ||||||||||||||  || ||| |||| |||||||||||||     
T  7167092 gatgtgtggagcaagagatagtggtaatctatgagca-aaatggtttccaagc-aacaacaacaaaacagccctagactagtgtagagcaaaaccacaca 7167189  T
Q  272 aagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctggg 368  Q
    ||||| |||||| |||||  |||||||| | | ||| |||   |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  7167190 aagagataacaaagcataaacaagataagcaagaaaggaa---gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctggg 7167285  T
Q  369 ggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||    
T  7167286 ggagagagcagctctccaatc 7167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 172 - 389
Target Start/End: Complemental strand, 2671836 - 2671621
Alignment:
Q  172 gatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaa-cagcctaagcctaatgtatagcaaaaccacac 270  Q
    ||||||||||| ||| ||||| | ||||||| |||  ||||||| |||||||| ||| ||||||||| |||||  || ||| |||| || ||||||||||    
T  2671836 gatgtgtggagcaagagatagtggtaatctatgagc-caaatggtctccaagcaaacaacaacaaaaacagccctagtctagtgtagagaaaaaccacac 2671738  T
Q  271 taagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctggg 368  Q
     ||||| |||||| ||| | |||||||| | | ||| |||   |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  2671737 aaagagataacaaagcaaaacaagataagcaagaaaggaa---gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctggg 2671642  T
Q  369 ggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||    
T  2671641 ggagagagcagctctccaatc 2671621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 8739174 - 8739098
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8739174 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 8739098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 9091412 - 9091336
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9091412 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 9091336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 28503975 - 28503899
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  28503975 gaacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggaagagagcagctctccaatc 28503899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 40372906 - 40372830
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40372906 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 40372830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 8477363 - 8477424
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8477363 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 8477424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 1305949 - 1306010
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  1305949 aagattgttgacccagttcagccaatatggcctaatctaggggagatagcagctctccaatc 1306010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 26928687 - 26928626
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||    
T  26928687 aagattgttgacccagttcagccaatatgacctaatctgggggagagagcaactctccaatc 26928626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 8370573 - 8370511
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  8370573 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 8370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 27975039 - 27974977
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  27975039 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 27974977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 27986533 - 27986471
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  27986533 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 27986471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 18552971 - 18552908
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  18552971 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 18552908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 21711222 - 21711285
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||| ||||    
T  21711222 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatc 21711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 16264350 - 16264412
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  16264350 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 16264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 25795781 - 25795843
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  25795781 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 25795843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 30709877 - 30709815
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  30709877 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 30709815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 32143321 - 32143383
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  32143321 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 32143383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 33386753 - 33386691
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||| ||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  33386753 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 33386691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 36029094 - 36029155
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||| | ||||| || |||||||||||||||| |||||||||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatc 36029155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 1417578 - 1417515
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||| | ||||||||    
T  1417578 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatc 1417515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 1736389 - 1736330
Alignment:
Q  331 attgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 1736330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 3716090 - 3716027
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||||| || ||||||||||||||||||||    
T  3716090 caagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatc 3716027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 40592870 - 40592807
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||| ||||||||| ||||||||||||    
T  40592870 caagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatc 40592807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 27452958 - 27453020
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||| ||||||| | ||||| || ||||||| ||||||||||||||||||||||||    
T  27452958 aagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaatc 27453020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 6794801 - 6794738
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||  | ||||| || |||||| |||||||||||||||||||||||||    
T  6794801 caagattgttgacccggttaggtccaatatgacctaatatgggggagagagcagctctccaatc 6794738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 26298987 - 26299050
Alignment:
Q  327 caagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| |  |||| || | ||||||||||||||||||||| ||||||||    
T  26298987 caagattgttgacccagttcggttcaatatgacataatctgggggagagagcagccctccaatc 26299050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 37466290 - 37466353
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||| | ||||| || ||||||||||||||||||| ||| ||||||||    
T  37466290 caagattgttgacacagttcggtccaatatgacctaatctgggggagagagtagccctccaatc 37466353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 47923994 - 47923931
Alignment:
Q  327 caagattgttgacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||||| |||||||||||||| || |||||    
T  47923994 caagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagcccttcaatc 47923931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 48438213 - 48438276
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||| ||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  48438213 caagattattgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 48438276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 38210629 - 38210571
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| | |||||||||||||||||||||||||    
T  38210629 ttgttgacccagttcggtccaatctgacctagtatgggggagagagcagctctccaatc 38210571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 50494258 - 50494200
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  50494258 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 50494200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 39153357 - 39153405
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagaga 375  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  39153357 aagattgttgacccagttcagtccaacttgacctaatctgggggagaga 39153405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 182258 - 181987
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  182258 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 182159  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  182158 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 182060  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  182059 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 181987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 16879864 - 16880135
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  16879864 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 16879963  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16879964 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 16880062  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16880063 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 16880135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 16884720 - 16884991
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  16884720 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 16884819  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16884820 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 16884918  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16884919 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 16884991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 24261617 - 24261346
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  24261617 tgttgtgaatccggttcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 24261518  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24261517 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 24261419  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24261418 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 24261346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 24266496 - 24266225
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  24266496 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcc 24266397  T
Q  218 tccaagctaacca-caacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||| || |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24266396 tccaagctaatcaacaacaaaacagcctaagcctaatgta-agcaaatccacactaagagctaacaagcatacaagataaacgataaaggaaaacgaaca 24266298  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266297 aaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 24266225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 116 - 389
Target Start/End: Complemental strand, 21812534 - 21812261
Alignment:
Q  116 actgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatg 214  Q
    |||||||||||||||  |||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||| ||||| | ||||||| ||| |||||||    
T  21812534 actgttgtgaatccgattcaactaatgaaaccttcacaccaatga-aataaaccaaagatgtgtggagcaagagatagtggtaatctatgagagcaaatg 21812436  T
Q  215 gcctccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaac 311  Q
    || ||||||||||| |||||||| ||||| ||||| || |||||||||||||||||| ||||| |||||||||||  ||||||||||| ||||||||||     
T  21812435 gcttccaagctaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagttaacaagcataaacaagataaacggtaaaagaaaa- 21812339  T
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21812338 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctttccaatc 21812261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 19992104 - 19992375
Alignment:
Q  118 tgttgtgaatccggctcaactaatg-aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    |||||||||||||| |||||||||| ||||||||||||||||| |||||| ||| ||||||||||| | ||||||| ||||||| | |||  ||||||||    
T  19992104 tgttgtgaatccggttcaactaatggaaccttcacaccaatga-aataaaccaaagatgtgtggagcaggtgatagtgataatcaatgagaacaaatggc 19992202  T
Q  217 ctccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacga 313  Q
     |||||||| || |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| ||    
T  19992203 ttccaagcttacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaacggtaaaaggaaa-ga 19992299  T
Q  314 acaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19992300 acaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 19992375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 24024594 - 24024349
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||| | |||  ||||||| |||||||| ||| |||||||||||||    
T  24024594 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagc 24024497  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-caccgagcaagattgttgac 339  Q
    ||| | ||| | |||||||||||||||| |||||||||||||||||  |||||||| | | ||||| ||  |||||||| |||||| |||||||||||||    
T  24024496 ctatgactagtatatagcaaaaccacacaaagagctaacaagcataaacaagataagcaagaaaaggaa--gaacaaaaacaccgaacaagattgttgac 24024399  T
Q  340 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24024398 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 24024349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 12406150 - 12406393
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| ||||    
T  12406150 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagc 12406247  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacc 340  Q
    |  || ||| |||||||||||||||||| ||||| || ||| ||| | |||||||| || |||||||||  ||||||||||||||| |||||||||||||    
T  12406248 cctagactagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcggtaaaagaaa--gaacaaaacaccgag-aagattgttgacc 12406344  T
Q  341 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  12406345 cagttcagccaatatggcctaatctgggggagagaatagctctccaatc 12406393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 31109849 - 31109606
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| |||||||||||| || ||||||||| ||||||| | |||  ||||||| |||||||| ||| |||||||||||||    
T  31109849 aaccttcacaccaatga-aataaa-caatgatgtgtgcagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaacaaaacagc 31109752  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttga 338  Q
    | |||  ||| |||||||||||||||||| ||||| |  ||| |||||  |||||||||| | ||||| ||  |||||||||||||| ||||||||||||    
T  31109751 cctaa--ctagtgtatagcaaaaccacac-aagagattccaaagcataaacaagataaacaagaaaaggaa--gaacaaaacaccgaacaagattgttga 31109657  T
Q  339 cccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  31109656 cccagttcagccaatatggcctaatctaggggagagagcagctctccaatc 31109606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 12396730 - 12396973
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| ||||    
T  12396730 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagc 12396827  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacc 340  Q
    |  || ||| |||||||||||||||||| ||||| || ||| ||| | |||||||| || |||| | ||  ||||||||||||||| |||||||||||||    
T  12396828 cctagactagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcggtaaagggaa--gaacaaaacaccgag-aagattgttgacc 12396924  T
Q  341 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  12396925 cagttcagccaatatggcctaatctgggggagagaacagctctccaatc 12396973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 4866548 - 4866792
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| ||||||||||||     
T  4866548 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgaggacaaatggtctccaagcaaacaacaacaaaacagt 4866645  T
Q  243 ctaagcctaatgtatagcaaaa-ccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgac 339  Q
    |  || ||| |||||||||||| |||||| || || || ||| ||| | |||||||| || |||||| ||  ||||||||||||||| ||||||||||||    
T  4866646 cctagactagtgtatagcaaaaaccacacaaaaagataccaaagcaaaacaagataagcggtaaaaggaa--gaacaaaacaccgag-aagattgttgac 4866742  T
Q  340 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4866743 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 4866792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 172 - 389
Target Start/End: Complemental strand, 20357797 - 20357582
Alignment:
Q  172 gatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaa-cagcctaagcctaatgtatagcaaaaccacac 270  Q
    ||||||||||| ||| ||||| | ||||||| |||  ||||||| |||||||||||| ||||||||| |||||  || ||| |||| |||||||||||||    
T  20357797 gatgtgtggagcaagagatagtggtaatctatgagc-caaatggtctccaagctaacaacaacaaaaacagccctagactagtgtagagcaaaaccacac 20357699  T
Q  271 taagagctaacaa-gcatacaagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggg 369  Q
     ||||| |||||| ||| ||||||||| | | ||||| ||  |||||||| ||| || |||||||||||||||||||||||||| ||||||||| |||||    
T  20357698 aaagagataacaaagcaaacaagataagcaagaaaaggaa--gaacaaaataccaag-aagattgttgacccagttcagccaatatggcctaatttgggg 20357602  T
Q  370 gagagagcagctctccaatc 389  Q
    ||||||||||||||||||||    
T  20357601 gagagagcagctctccaatc 20357582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 2057929 - 2058027
Alignment:
Q  288 acaagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaa 387  Q
    ||||||||| | ||||||| ||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2057929 acaagataagcaataaaaggaa--gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaa 2058025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 18408764 - 18408825
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18408764 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 18408825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 21639809 - 21639870
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21639809 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 21639870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 1533540 - 1533479
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1533540 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcatctctccaatc 1533479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 18413641 - 18413701
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18413641 aagattgttgacccagttcagccaatatggcctaatct-ggggagagagcagctctccaatc 18413701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 21646007 - 21646068
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  21646007 aagattgttgacccagttcagccaatatggcctaatctagggaagagagcagctctccaatc 21646068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 21983285 - 21983346
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 21983346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 9190106 - 9190043
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||| |||||||||||||||||||||||||||    
T  9190106 caagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatc 9190043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 20284088 - 20284151
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  20284088 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 20284151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 29159802 - 29159865
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||||| |||||||||||||||||||||||    
T  29159802 caagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatc 29159865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 2580389 - 2580452
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| ||| | ||||| || |||| |||||||||||||||||||||||||||    
T  2580389 caagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaatc 2580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 33332548 - 33332485
Alignment:
Q  327 caagattgttgacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | | ||| || ||||||||||||||||||||||| ||||||||    
T  33332548 caagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatc 33332485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 46516408 - 46516345
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||||| |||||||||||||| ||||||||    
T  46516408 caagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatc 46516345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 49091660 - 49091723
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| || ||||| || |||||||||||| |||||||| ||||||||||    
T  49091660 caagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatc 49091723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 44848781 - 44848719
Alignment:
Q  328 aagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| |  |||| || ||||| ||||||||||||||||||||||||||    
T  44848781 aagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatc 44848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 2647794 - 2647731
Alignment:
Q  327 caagattgttgacccagttcagcc-aatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| ||| ||| ||| || |||| |||||||||||||||||| ||||||||    
T  2647794 caagattgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatc 2647731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 9185263 - 9185200
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| |  |||| |||||||||||||| ||||||||||||    
T  9185263 caagattgttgacccagttcggtccaatataacctagtctgggggagagagaagctctccaatc 9185200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 28617319 - 28617260
Alignment:
Q  331 attgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||| ||||||||| | ||||| || |||| |||||||||||||||||||||||||||    
T  28617319 attgtttacccagttcggtccaatatgacctactctgggggagagagcagctctccaatc 28617260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 31155911 - 31155969
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  31155911 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 31155969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 35960815 - 35960876
Alignment:
Q  327 caagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaa 387  Q
    |||||||||||||| ||||| |  |||| || ||||||||||||||||||||||| ||||||    
T  35960815 caagattgttgaccgagttcggttcaatatgacctaatctgggggagagagcagccctccaa 35960876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 375
Target Start/End: Complemental strand, 8153514 - 8153466
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagaga 375  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  8153514 aagattgttgacccagttcagtccaacttgacctaatctgggggagaga 8153466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 43988759 - 43988487
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||     
T  43988759 tgttgtgaatccggctcaactaatgaaccttcacgccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagagcaaatggct 43988660  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagat-aaacgat-aaaagaaaacgaac 315  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||| ||||    
T  43988659 tccaagctaacaacaacaaaacagcctaagcctaatgtatagcacaaccacactaagagctaacaagcatacaagataaaaccatgaaaagaaaa-gaac 43988561  T
Q  316 aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43988560 aaaacaccaagcaagattgtttacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 43988487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 39445292 - 39445562
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || || |||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | | |  ||||||||     
T  39445292 tgttgtgaatccggttctacaaacgaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgtgaacaaatggct 39445390  T
Q  218 tccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| |||    
T  39445391 tccaagcaaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaa 39445487  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39445488 caaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 39445562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 25445382 - 25445112
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || || |||||||||||||||||| |||||| ||||||||||||||| ||| ||||| ||||||| | |||  ||||||||     
T  25445382 tgttgtgaatccggttctacaaacgaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagcgatagtgataatcaatgagaacaaatggct 25445284  T
Q  218 tccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||| ||  ||||||||||| |||||| ||| |||    
T  25445283 tccaagcaaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcgtaaacaagataaacggtaaaaggaaa-gaa 25445187  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25445186 caaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 25445112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 1055304 - 1055034
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || |  |||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | | |  |||||| |     
T  1055304 tgttgtgaatccggttctacaatcgaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgtgaacaaatgtct 1055206  T
Q  218 tccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    |||||||| || |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| |||    
T  1055205 tccaagcttacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaa 1055109  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1055108 caaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcaactctccaatc 1055034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 44024140 - 44023896
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| || |||||| ||||||| | |||  |||||||| ||||||| ||| |||||||| ||||    
T  44024140 aaccttcacaccaatga-aataaaccaatgatgtgtggagcaactgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagc 44024043  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgac 339  Q
    | ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||| | |||| ||||  ||||||||||||||||||||||||||||    
T  44024042 cctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaatggtaaaggaaa--gaacaaaacaccgagcaagattgttgac 44023946  T
Q  340 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44023945 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 44023896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 235 - 389
Target Start/End: Complemental strand, 24787551 - 24787399
Alignment:
Q  235 aaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcatacaagataaacgataaaagaaaacgaacaaaacaccgagcaagatt 333  Q
    |||||||||  || || ||||| ||||||||||||| ||||| |||||| ||| ||||||||| | | ||||| ||  |||||||||||| || ||||||    
T  24787551 aaaacagccctagacttatgtagagcaaaaccacacaaagagataacaaagcaaacaagataagcaagaaaaggaa--gaacaaaacaccaag-aagatt 24787455  T
Q  334 gttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24787454 gttgacccagttcagccaatatggcctaatctgggggggagagcagctctccaatc 24787399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 41398055 - 41398298
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaa---aac 239  Q
    ||||||||||||||||| |||||| |||| |||||||||| ||||||||| ||||||| | |||  || |||| |||||||| ||| |||||||   |||    
T  41398055 aaccttcacaccaatga-aataaaccaattatgtgtggagcaagtgatagtgataatcaatgagaacatatggtctccaagcaaacaacaacaacaaaac 41398153  T
Q  240 agcc-taagcctaatgtatagcaaaa--ccacactaagagctaacaagcatacaagataaacgataaaagaaa-acgaacaaaacaccgagcaagattgt 335  Q
    |||| |||  ||| ||||||||||||  |||||| ||||| || |||      |  |||||| | | |||||  | ||||||||||||||| ||||||||    
T  41398154 agccctaa--ctagtgtatagcaaaaaaccacacaaagagataccaa------agcataaacaagataagaaggaagaacaaaacaccgag-aagattgt 41398244  T
Q  336 tgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  41398245 tgacccaggtcagccaatatggcctaatctgggggagagagcagctctccaatc 41398298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 24202865 - 24202804
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24202865 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 24202804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 41390567 - 41390643
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||| |||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  41390567 gaacaaaacatcgag-aagattgttgacccagatcagccaatatggcctaatctgggggagagagcagctctccaatc 41390643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 19358939 - 19358878
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||||||    
T  19358939 aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatc 19358878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 19361528 - 19361467
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||||||    
T  19361528 aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatc 19361467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 19380168 - 19380107
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||||||    
T  19380168 aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatc 19380107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 47704034 - 47703971
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  47704034 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 47703971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 19072928 - 19072990
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  19072928 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 19072990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 19120818 - 19120880
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  19120818 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 19120880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 26644994 - 26644932
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  26644994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 26644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 41386566 - 41386646
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagc 224  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  ||||||| ||||||||    
T  41386566 aaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagc 41386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 9476260 - 9476323
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || |||||||| |||||||||||||||||||||||    
T  9476260 caagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatc 9476323  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 3281708 - 3281770
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||| |||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  3281708 aagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 3281770  T

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Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 775671 - 775734
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| ||| | ||||| || ||||||||||||||||||| ||||||||||||    
T  775671 caagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatc 775734  T

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Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 13598397 - 13598460
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| || |||||    
T  13598397 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatc 13598460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 16124614 - 16124551
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  16124614 caagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 16124551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 27104470 - 27104407
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||| | ||||| |  ||||||||||||||||||||||||||||||||    
T  27104470 caagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatc 27104407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 29651810 - 29651873
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  29651810 caagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatc 29651873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 47098922 - 47098859
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || || |||||||||||||||||||| ||||||||    
T  47098922 caagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatc 47098859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 37069770 - 37069828
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctcc 385  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||| ||||||    
T  37069770 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctcc 37069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 389
Target Start/End: Complemental strand, 21536635 - 21536604
Alignment:
Q  358 cctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||    
T  21536635 cctaatctgggggagagagcagctctccaatc 21536604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 9459419 - 9459477
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  9459419 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 9459477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 9463246 - 9463304
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  9463246 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 9463304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 13604720 - 13604658
Alignment:
Q  328 aagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||  |  |||| || |||||| |||||||||||||||||||||||||    
T  13604720 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatc 13604658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 16226446 - 16226388
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  16226446 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 16226388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 19344212 - 19344483
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||| ||||| | ||||||| ||| |||||||||    
T  19344212 tgttgtgaatccggttcaactaatgaaaccttcacaccaatga-aataaaccaaagatgtgtggagcaagagatagtggtaatctatgagagcaaatggc 19344310  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  19344311 ctccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaaggaaaagaaca 19344410  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19344411 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatc 19344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 19349070 - 19349341
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaa-ccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||| ||||| | ||||||| ||| |||||||||    
T  19349070 tgttgtgaatccggttcaactaatgaaaccttcacaccaatga-aataaaccaaagatgtgtggagcaagagatagtggtaatctatgagagcaaatggc 19349168  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaagaaaacgaaca 316  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  19349169 ctccaagctaacaacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaagcatacaagataaacgataaaaggaaaagaaca 19349268  T
Q  317 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19349269 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatc 19349341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 32246577 - 32246850
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || ||  ||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||||| |||  ||||||| |    
T  32246577 tgttgtgaatccggttctacaaagaaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtc 32246675  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaac-aagcat--acaagataaacgataaaagaa-aacga 313  Q
    ||||||||||| |||||||||||| |  || ||| |||||||||||||||||| ||||| |  | ||||||  ||||||||| | | |||| ||  | ||    
T  32246676 tccaagctaacaacaacaaaacagtcctagactagtgtatagcaaaaccacac-aagagattccaaagcataaacaagataagcaagaaaaaaaggaaga 32246774  T
Q  314 acaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  32246775 acaaaacaccgaacaagattgttgaccttgttcagccaatatggcctaatctgggggagagagcagctctccaatc 32246850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 39812255 - 39812011
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||| | |||  ||||||| |||||||| ||| |||||||||||||    
T  39812255 aaccttcacaccaatga-aataaaccaaagatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaacaaaacagc 39812157  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaag---catacaagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttga 338  Q
    | ||||| || |||||||||||||||||| ||||| |  |||    || ||||||||| || |||||||||  ||||||||||||||| |||||||||||    
T  39812156 cctaagc-tagtgtatagcaaaaccacac-aagagattccaaagcacaaacaagataagcggtaaaagaaa--gaacaaaacaccgag-aagattgttga 39812062  T
Q  339 cccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39812061 accagttcagccaatatggcctaatctgggggagagagcagctctccaatc 39812011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 146 - 389
Target Start/End: Complemental strand, 44312887 - 44312647
Alignment:
Q  146 cttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagccta 245  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| | |||      
T  44312887 cttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagccgccct 44312790  T
Q  246 agcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccag 343  Q
    || | | |||||||||||||||||| ||||| || ||| ||| | |||||||| ||||||||| ||  ||||||||||||||| ||||||||||||||||    
T  44312789 agacaagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcgataaaaggaa--gaacaaaacaccgag-aagattgttgacccag 44312693  T
Q  344 ttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  44312692 ttcagccaatatggcctaatctgggggagagagcagctctccaatc 44312647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 996948 - 996850
Alignment:
Q  17 atcttatgtattattttatttgtattattaacagaagtcacagcatgattcggatgactacattatagatatggaatattggacagatccagaatatgt 115  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996948 atcttatgtattattttaattgtattattaacagaagtcacagcatgattcggatgactacattatagatatggaatattggacagatccagaatatgt 996850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 218 - 389
Target Start/End: Original strand, 14291380 - 14291550
Alignment:
Q  218 tccaagctaaccacaacaaaa-cagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| ||||||||| |||||  || |||||||| ||||||||||||| ||||| |||||| ||| | |||||||| | | ||| |||   |||    
T  14291380 tccaagcaaacaacaacaaaaacagccctagactaatgtagagcaaaaccacacaaagagataacaaagcaaaacaagataagcaagaaaggaa---gaa 14291476  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14291477 caaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 14291550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 11099038 - 11098962
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11099038 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 11098962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 3491751 - 3491812
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3491751 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 3491812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 9296512 - 9296436
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9296512 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatc 9296436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 25398496 - 25398557
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  25398496 aagattgttgacccagttcagccaatatgacctaatctgggggagagagcagctctccaatc 25398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 25403634 - 25403695
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  25403634 aagattgttgactcagttcagccaatatgacctaatctgggggagagagcagctctccaatc 25403695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 8040059 - 8040122
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  8040059 caagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatc 8040122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 40738844 - 40738904
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  40738844 aagattgttgacccagttcagccaatatgacctaatctggggg-gagagcagctctccaatc 40738904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 10445542 - 10445479
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| ||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  10445542 caagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 10445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 13569331 - 13569390
Alignment:
Q  331 attgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 13569390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 14699105 - 14699042
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  14699105 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 14699042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 21629943 - 21630005
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||    
T  21629943 caagattgttgacccagttcagtccaatatgacctaatctgggg-agagagcagctctccaatc 21630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 34682432 - 34682369
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||||||||||||||||||||    
T  34682432 caagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatc 34682369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 28259274 - 28259212
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || |||||| |||||||||||||||||||||||||    
T  28259274 aagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatc 28259212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 17865202 - 17865265
Alignment:
Q  327 caagattgttgacccagttcagcc-aatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||| | ||| || ||||||||||||||||||||| | ||||||||    
T  17865202 caagattgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatc 17865265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 20522219 - 20522282
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||| | ||||||||    
T  20522219 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatc 20522282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 34388859 - 34388920
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| ||| | ||||| || ||||||||||||||||||| ||||||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatc 34388920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 8390244 - 8390185
Alignment:
Q  331 attgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||| | ||||  || |||||| |||||||||||||||||||||||||    
T  8390244 attgttgacccagttcggtccaaaatgacctaatttgggggagagagcagctctccaatc 8390185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 389
Target Start/End: Original strand, 25407653 - 25407684
Alignment:
Q  358 cctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||    
T  25407653 cctaatctgggggagagagcagctctccaatc 25407684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 31056044 - 31056106
Alignment:
Q  328 aagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| ||||| |  |||| || |||||||| |||||||||||||||||||||||    
T  31056044 aagattgttgacctagttcggttcaatatgacctaatctaggggagagagcagctctccaatc 31056106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 35215586 - 35215644
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  35215586 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 35215644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 35217963 - 35218021
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  35217963 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 35218021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 10707348 - 10707287
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||| | ||||| || |||||| ||||||||||| || ||||||||||    
T  10707348 agattgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatc 10707287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 45332181 - 45332238
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaat 388  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| |||||||    
T  45332181 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaat 45332238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 18855519 - 18855789
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || |  |||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  ||||||||     
T  18855519 tgttgtgaatccggttctacaagcgaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggct 18855617  T
Q  218 tccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| |||    
T  18855618 tccaagcaaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaa 18855714  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18855715 caaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 18855789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 3813816 - 3814086
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || ||  ||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||| | ||| |||||||| |    
T  3813816 tgttgtgaatccggttctacaaagaaaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtggtaatcaatgagagcaaatggtc 3813914  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaa-ccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| |||||||||||| |  || ||| ||||| |||||| |||||| |||||||||||||||||  |||||||| | | ||| |||   |||    
T  3813915 tccaagcaaacaacaacaaaacagtcctagactagtgtatcgcaaaaaccacacaaagagctaacaagcataaacaagataagcaagaaaggaa---gaa 3814011  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3814012 caaaacaccatgcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 3814086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 143 - 389
Target Start/End: Original strand, 5732481 - 5732727
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| ||||   ||||||||||||||| ||||||| | | ||||| | |||  ||||||| |||||||||||| |||||||||||||    
T  5732481 aaccttcacaccaatgaaaata---caatgatgtgtggagcaagtgatggtggtaatcaatgagaacaaatggtctccaagctaacaacaacaaaacagc 5732577  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaa-gcatacaagataaacgataaaagaaa--acgaacaaaacaccgagcaagattgttga 338  Q
    | ||||| || ||||||| |||||||||| |||||||||||| ||| |||||||||||| |||| ||||  || || ||||||| || ||||||||||||    
T  5732578 cctaagc-tagtgtatagtaaaaccacacaaagagctaacaaagcaaacaagataaacggtaaaggaaagaacaaaaaaaacactgaacaagattgttga 5732676  T
Q  339 cccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5732677 cccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 5732727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 9224698 - 9224430
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| ||||  ||  ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |    
T  9224698 tgttgtgaatccggttcaaaaaaaaaaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtc 9224601  T
Q  218 tccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaac 315  Q
    ||||||| ||| ||||||||||||||  || ||| |||||||||||||||||| ||||| || ||| ||| | |||||||| || |||||| ||  ||||    
T  9224600 tccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcggtaaaaggaa--gaac 9224503  T
Q  316 aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9224502 aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 9224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 9229460 - 9229217
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||||||||    
T  9229460 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagc 9229363  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacc 340  Q
    |  || ||| |||||||||||||||||| ||||| || ||| ||| | |||||||| || |||||| ||  ||||||||||||||| ||||||||| |||    
T  9229362 cctagactagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcggtaaaaggaa--gaacaaaacaccgag-aagattgttaacc 9229266  T
Q  341 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9229265 cagttcagccaatatggcctaatctgggggagagagcagctctccaatc 9229217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 117 - 389
Target Start/End: Complemental strand, 45348110 - 45347840
Alignment:
Q  117 ctgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    ||||||||||||||| || || ||  ||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||||| |||  |||||||     
T  45348110 ctgttgtgaatccggttctacaaagaaaccttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggt 45348013  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaag---catacaagataaacgataaaagaaaacga 313  Q
    || ||||||||| |||||||||||| |  || ||| |||| ||||||||||||| ||||| |  |||    || ||||||||| || |||||| ||| ||    
T  45348012 cttcaagctaacaacaacaaaacagtcctagactagtgtaaagcaaaaccacac-aagagattccaaagcacaaacaagataagcggtaaaaggaaa-ga 45347915  T
Q  314 acaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  45347914 acaaaacaccgag-aagattgttgacccagttcagccaatatggcttaatctgggggagagagcagctctccaatc 45347840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 117 - 389
Target Start/End: Complemental strand, 45357589 - 45357319
Alignment:
Q  117 ctgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggc 216  Q
    ||||||||||||||| || || ||  ||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||||| |||  |||||||     
T  45357589 ctgttgtgaatccggttctacaaagaaaccttcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggt 45357492  T
Q  217 ctccaagctaaccacaacaaaacagcctaagcctaatgtatagcaaaaccacactaagagctaacaag---catacaagataaacgataaaagaaaacga 313  Q
    || ||||||||| |||||||||||| |  || ||| |||| ||||||||||||| ||||| |  |||    || ||||||||| || |||||| ||| ||    
T  45357491 cttcaagctaacaacaacaaaacagtcctagactagtgtaaagcaaaaccacac-aagagattccaaagcacaaacaagataagcggtaaaaggaaa-ga 45357394  T
Q  314 acaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  45357393 acaaaacaccgag-aagattgttgacccagttcagccaatatggcataatctgggggagagagcagctctccaatc 45357319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 389
Target Start/End: Original strand, 51520280 - 51520519
Alignment:
Q  148 tcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaag 247  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||| |||||  ||    
T  51520280 tcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctag 51520377  T
Q  248 cctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccagt 344  Q
     ||| ||||||||||||||| || ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| |||||||||||||||||    
T  51520378 actagtgtatagcaaaaccatacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttgacccagt 51520474  T
Q  345 tcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    || |||||| |||||||||||||||||||||||||||||||||||    
T  51520475 tctgccaatatggcctaatctgggggagagagcagctctccaatc 51520519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 147 - 389
Target Start/End: Complemental strand, 56146974 - 56146734
Alignment:
Q  147 ttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagcctaa 246  Q
    ||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||| ||| |||||||| ||| |||||||| |||||  |    
T  56146974 ttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagcccta 56146877  T
Q  247 gcctaatgtatagcaaaaccacactaagagctaacaa-gcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacccag 343  Q
    | ||| |||||||||||||||||| ||||| |||||| |||||  ||||||||  |||||||| ||  ||||||||||||||| ||||||||||  ||||    
T  56146876 gactagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataagtgataaaaggaa--gaacaaaacaccgag-aagattgttggtccag 56146780  T
Q  344 ttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  56146779 ttcagccaatatggcctaatctgggggagagagcagctctccaatc 56146734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 24741926 - 24742002
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24741926 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 24742002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 29760627 - 29760703
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29760627 gaacaaaacaccaag-aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 29760703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 28468625 - 28468564
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  28468625 aagattgttgacccagttcagccaatatgacctaatctggaggagagagcagctctccaatc 28468564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 10047378 - 10047441
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  10047378 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 10047441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 36315327 - 36315264
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||| |||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  36315327 caagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 36315264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 36329536 - 36329473
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||| |||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  36329536 caagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 36329473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 38152537 - 38152474
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||||||||||||||||||||    
T  38152537 caagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatc 38152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 39245993 - 39246056
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  39245993 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 39246056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 5396768 - 5396706
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || |||||||||| |||||||||||||||||||||    
T  5396768 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatc 5396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 5143260 - 5143319
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaa 387  Q
    |||||||||||| ||||| | ||||| || ||||||||||||||||||||||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaa 5143319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 5269289 - 5269226
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| ||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  5269289 caagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 5269226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 16623391 - 16623328
Alignment:
Q  327 caagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| |  |||| || |||||||||| |||||||||||||||||||||    
T  16623391 caagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatc 16623328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 31985730 - 31985669
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || |||||||||||| |||||||||||||||||||    
T  31985730 aagattgttgacccagttcggtccaatatgacctaatctgggg-agagagcagctctccaatc 31985669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 24333808 - 24333871
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||| || |||||| | ||||| || |||||| |||||||||||||||||||||||||    
T  24333808 caagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagctctccaatc 24333871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 3796616 - 3796554
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || |||||| |||||||||||||| ||||| ||||    
T  3796616 aagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatc 3796554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 5147678 - 5147736
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctcca 386  Q
    |||||||||||||||||| | ||||| || |||||| |||||||| |||||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctcca 5147736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 16931789 - 16931847
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  16931789 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 16931847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 16934143 - 16934201
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  16934143 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 16934201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 22780373 - 22780431
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  22780373 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 22780431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 44599838 - 44599896
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  44599838 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 44599896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 118 - 389
Target Start/End: Original strand, 155 - 425
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcc 217  Q
    |||||||||||||| || || || |||||||||||||||||| |||||| ||| ||||||||||| ||||||| | ||||||| | |||  ||||||||     
T  155 tgttgtgaatccggttctacaaacgaaccttcacaccaatga-aataaaccaaagatgtgtggagcaagtgatggtgataatcaatgagaacaaatggct 253  T
Q  218 tccaagctaaccacaacaaaacagcc-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaa 314  Q
    ||||||| ||| |||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| |||    
T  254 tccaagcaaacaacaacaaa-cagccctaagc-tagtgtatagcaaaaccacacaaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaa 350  T
Q  315 caaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  351 caaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 9907 - 9665
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | ||| |||||||| |||||| | ||| |||||||||||||    
T  9907 aaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagagcaaatggtctccaaccaaacaacaacaaaacagc 9809  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgac 339  Q
    | ||||| || | |||||||||||||||| |||||||||||||||||  |||||||| | | ||| |||   ||||||||||||||| ||||||||||||    
T  9808 cctaagc-tagtatatagcaaaaccacac-aagagctaacaagcataaacaagataagcaagaaaggaa---gaacaaaacaccgag-aagattgttgac 9715  T
Q  340 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9714 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 9665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 288
Target Start/End: Complemental strand, 148 - 13
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||      ||| | ||| |||||||| |||||||  ||| |||||||||||||    
T  148 aaccttcacaccaatta-aataaaccaatgatgtgtggagcaagtgata------atcaatgagagcaaatggtctccaagtaaacaacaacaaaacagc 56  T
Q  243 c-taagcctaatgtatagcaaaaccacactaagagctaacaagcata 288  Q
    | ||||| || ||||||||||||||||||   |||||||||||||||    
T  55 cctaagc-tagtgtatagcaaaaccacac---gagctaacaagcata 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 389
Target Start/End: Complemental strand, 35328 - 35085
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagctaaccacaacaaaacagc 242  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||||| | |||  ||||||| |||||||| ||| |||||||||||||    
T  35328 aaccttcacaccaatga-aataaa-caatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagc 35231  T
Q  243 ctaagcctaatgtatagcaaaaccacactaagagctaacaa-gcata-caagataaacgataaaagaaaacgaacaaaacaccgagcaagattgttgacc 340  Q
    |  || ||| |||||||||||||||||| ||||| || ||| ||| | |||||||| || |||||| ||  ||||||||||||||| ||||||||| |||    
T  35230 cctagactagtgtatagcaaaaccacacaaagagataccaaagcaaaacaagataagcggtaaaaggaa--gaacaaaacaccgag-aagattgttaacc 35134  T
Q  341 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35133 cagttcagccaatatggcctaatctgggggagagagcagctctccaatc 35085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 18048 - 17987
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18048 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 17987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 24141 - 24080
Alignment:
Q  328 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24141 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatc 24080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 6293 - 6341
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaa 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6293 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaa 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 8516 - 8454
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  8516 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 8454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 34216 - 34136
Alignment:
Q  143 aaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatctaagagtgcaaatggcctccaagc 224  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||| | |||  ||||||| ||||||||    
T  34216 aaccttcacaccaatga-aataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagc 34136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 85684 - 85745
Alignment:
Q  329 agattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatc 85745  T

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Target: scaffold0479 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 13141 - 13222
Alignment:
Q  118 tgttgtgaatccggctcaactaatgaaccttcacaccaatgagaataaatcaatgatgtgtggagtaagtgatagagataatc 200  Q
    |||||||||||||| || || || |||||||||||||||||| |||||| ||| ||| ||||||| ||||||||| |||||||    
T  13141 tgttgtgaatccggttctacaaacgaaccttcacaccaatga-aataaaccaaagatatgtggagcaagtgatagtgataatc 13222  T

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Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 10728 - 10791
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||| |||||||||||| | ||||| || |||||| |||||||||||||||||||||||||    
T  10728 caagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatc 10791  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 5682 - 5745
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||||||||| || |||||    
T  5682 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatc 5745  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 2491 - 2554
Alignment:
Q  327 caagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||||   ||||| || |||||||||||||||| |||||| ||||||||    
T  2491 caagattgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatc 2554  T

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Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 133377 - 133315
Alignment:
Q  328 aagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||  |  |||| || |||||| |||||||||||||||||||||||||    
T  133377 aagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaatc 133315  T

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Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 45253 - 45315
Alignment:
Q  328 aagattgttgacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    |||||||||||| |||||| |  |||| || ||||||||||||||||||||||||||||||||    
T  45253 aagattgttgactcagttcggttcaatatgacctaatctgggggagagagcagctctccaatc 45315  T

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Target: scaffold0087 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 44058 - 43996
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||||||| | ||||| ||  ||| |||||||||||||||||||||||||||    
T  44058 aagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatc 43996  T

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Target: scaffold0087; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 36929 - 36869
Alignment:
Q  328 aagattgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaa 387  Q
    ||||||||||||||||||| | ||||| || |||||||| ||| |||||||||||| ||||    
T  36929 aagattgttgacccagttcggtccaatatgacctaatctagggaagagagcagctcgccaa 36869  T

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Target: scaffold0267 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 329 - 271
Alignment:
Q  332 ttgttgacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatc 389  Q
    ||||||||||||||| | ||||| || |||| |||||||||||||||||| ||||||||    
T  329 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatc 271  T

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Target: scaffold0978 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 347 - 300
Alignment:
Q  312 gaacaaaacaccgagcaagattgttgacccagttcagccaatgtggcct 360  Q
    |||||||||||| || ||||||||||||| |||||||||||| ||||||    
T  347 gaacaaaacaccaag-aagattgttgacctagttcagccaatatggcct 300  T

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