View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14575_low_8 (Length: 388)

Name: NF14575_low_8
Description: NF14575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14575_low_8
NF14575_low_8
[»] chr7 (33 HSPs)
chr7 (182-315)||(39383878-39384011)
chr7 (182-291)||(8735947-8736056)
chr7 (182-315)||(19069803-19069937)
chr7 (182-291)||(24417304-24417413)
chr7 (182-291)||(22151684-22151793)
chr7 (182-291)||(22207548-22207657)
chr7 (182-291)||(23351101-23351210)
chr7 (182-291)||(36701484-36701593)
chr7 (182-291)||(36782820-36782929)
chr7 (182-288)||(11687210-11687316)
chr7 (182-291)||(45057607-45057716)
chr7 (269-330)||(38340726-38340787)
chr7 (236-329)||(22207464-22207556)
chr7 (269-330)||(45057539-45057600)
chr7 (269-329)||(36701357-36701417)
chr7 (269-330)||(11687386-11687447)
chr7 (280-329)||(36701750-36701799)
chr7 (271-328)||(39383805-39383862)
chr7 (269-328)||(11687006-11687065)
chr7 (236-315)||(23351202-23351281)
chr7 (280-327)||(24417491-24417538)
chr7 (269-327)||(22151860-22151918)
chr7 (269-327)||(22207775-22207833)
chr7 (280-329)||(8735741-8735790)
chr7 (269-330)||(8736123-8736184)
chr7 (269-330)||(19069951-19070012)
chr7 (269-330)||(19105598-19105659)
chr7 (269-328)||(23350915-23350974)
chr7 (269-328)||(45057860-45057919)
chr7 (182-220)||(38340893-38340931)
chr7 (269-315)||(38340925-38340971)
chr7 (269-329)||(23351355-23351415)
chr7 (236-304)||(24417244-24417312)
[»] chr2 (68 HSPs)
chr2 (182-330)||(30785938-30786086)
chr2 (182-291)||(6645647-6645756)
chr2 (182-291)||(27516285-27516394)
chr2 (182-284)||(23461270-23461372)
chr2 (182-291)||(45001179-45001288)
chr2 (182-291)||(7031931-7032040)
chr2 (182-291)||(15129800-15129909)
chr2 (182-291)||(18904756-18904865)
chr2 (182-291)||(26892590-26892699)
chr2 (182-291)||(26898029-26898138)
chr2 (182-291)||(36099450-36099559)
chr2 (182-291)||(38578036-38578145)
chr2 (182-284)||(28957968-28958070)
chr2 (182-284)||(35251629-35251731)
chr2 (182-291)||(31309211-31309320)
chr2 (182-258)||(31309514-31309590)
chr2 (182-291)||(7182476-7182584)
chr2 (182-291)||(39110247-39110356)
chr2 (269-330)||(7032155-7032216)
chr2 (269-330)||(7031803-7031864)
chr2 (269-330)||(18904597-18904658)
chr2 (238-327)||(23461386-23461475)
chr2 (269-330)||(27516157-27516218)
chr2 (269-330)||(45001051-45001112)
chr2 (266-325)||(28958111-28958170)
chr2 (236-315)||(39110176-39110255)
chr2 (271-329)||(18905011-18905069)
chr2 (280-330)||(27516551-27516601)
chr2 (280-330)||(31309777-31309827)
chr2 (238-327)||(10413995-10414084)
chr2 (269-330)||(15130053-15130114)
chr2 (269-330)||(36099291-36099352)
chr2 (269-329)||(6645520-6645580)
chr2 (269-329)||(7182698-7182758)
chr2 (280-328)||(15129643-15129691)
chr2 (269-329)||(26892463-26892523)
chr2 (269-329)||(26897902-26897962)
chr2 (269-329)||(35251495-35251555)
chr2 (280-327)||(30785704-30785751)
chr2 (271-330)||(38578183-38578242)
chr2 (280-326)||(35251887-35251933)
chr2 (238-315)||(15129716-15129793)
chr2 (269-326)||(28957797-28957854)
chr2 (269-330)||(31369512-31369573)
chr2 (269-330)||(35589165-35589226)
chr2 (247-315)||(36099561-36099629)
chr2 (269-329)||(39110071-39110131)
chr2 (269-329)||(39110423-39110483)
chr2 (236-315)||(7032032-7032110)
chr2 (271-330)||(7182348-7182407)
chr2 (236-315)||(15129901-15129979)
chr2 (236-315)||(18904857-18904935)
chr2 (236-315)||(23461200-23461278)
chr2 (236-315)||(26892691-26892770)
chr2 (236-315)||(45001280-45001358)
chr2 (280-330)||(26892855-26892905)
chr2 (280-330)||(26898294-26898344)
chr2 (280-330)||(31309414-31309464)
chr2 (238-304)||(31309615-31309681)
chr2 (238-304)||(36099377-36099443)
chr2 (269-326)||(10414337-10414394)
chr2 (246-315)||(18904672-18904741)
chr2 (238-315)||(31309584-31309661)
chr2 (280-325)||(38577833-38577878)
chr2 (246-315)||(39110145-39110214)
chr2 (280-328)||(6645881-6645929)
chr2 (267-315)||(27516418-27516466)
chr2 (72-104)||(31309119-31309151)
[»] scaffold0180 (4 HSPs)
scaffold0180 (182-315)||(18439-18572)
scaffold0180 (238-329)||(18334-18425)
scaffold0180 (269-328)||(18716-18775)
scaffold0180 (236-315)||(18564-18642)
[»] chr8 (82 HSPs)
chr8 (182-315)||(4881213-4881346)
chr8 (182-315)||(5876607-5876740)
chr8 (182-291)||(21524480-21524589)
chr8 (182-291)||(23152399-23152508)
chr8 (183-291)||(162487-162595)
chr8 (182-288)||(11901318-11901424)
chr8 (182-288)||(35181923-35182029)
chr8 (182-291)||(1259818-1259927)
chr8 (182-291)||(5821877-5821986)
chr8 (182-291)||(6513294-6513402)
chr8 (182-291)||(9237548-9237657)
chr8 (182-291)||(41387266-41387375)
chr8 (182-291)||(45467555-45467664)
chr8 (182-289)||(5881642-5881749)
chr8 (182-291)||(10398522-10398630)
chr8 (190-291)||(29802317-29802418)
chr8 (182-304)||(10397773-10397894)
chr8 (182-288)||(12850167-12850273)
chr8 (182-288)||(14054992-14055098)
chr8 (182-288)||(35103423-35103529)
chr8 (182-291)||(3317862-3317970)
chr8 (182-291)||(4325720-4325829)
chr8 (182-252)||(12823440-12823510)
chr8 (182-288)||(42984747-42984853)
chr8 (238-329)||(5821993-5822084)
chr8 (238-329)||(12823265-12823356)
chr8 (269-328)||(4325594-4325653)
chr8 (280-330)||(21524274-21524324)
chr8 (269-330)||(4325973-4326034)
chr8 (269-330)||(5821672-5821733)
chr8 (269-330)||(29802158-29802219)
chr8 (269-329)||(5876835-5876895)
chr8 (269-329)||(21524656-21524716)
chr8 (269-329)||(45467436-45467496)
chr8 (269-328)||(12823614-12823673)
chr8 (269-328)||(14055108-14055167)
chr8 (269-328)||(15304331-15304390)
chr8 (269-328)||(15484700-15484759)
chr8 (269-328)||(35103599-35103658)
chr8 (280-326)||(12850354-12850400)
chr8 (280-330)||(29802581-29802631)
chr8 (280-330)||(41387562-41387612)
chr8 (269-330)||(3318037-3318098)
chr8 (269-330)||(12849962-12850023)
chr8 (280-329)||(14054787-14054836)
chr8 (280-329)||(35181717-35181766)
chr8 (280-328)||(2916844-2916892)
chr8 (269-329)||(10398697-10398757)
chr8 (280-328)||(11919656-11919704)
chr8 (269-329)||(45467808-45467868)
chr8 (269-328)||(5876462-5876521)
chr8 (236-315)||(5881571-5881650)
chr8 (236-315)||(6513394-6513473)
chr8 (236-315)||(35103352-35103431)
chr8 (269-330)||(35103216-35103278)
chr8 (269-330)||(162662-162723)
chr8 (269-330)||(6513167-6513227)
chr8 (238-315)||(9237664-9237741)
chr8 (283-328)||(23152693-23152738)
chr8 (238-315)||(29802233-29802310)
chr8 (280-328)||(11901125-11901173)
chr8 (269-329)||(11901494-11901554)
chr8 (267-315)||(23152531-23152579)
chr8 (269-329)||(41387140-41387199)
chr8 (280-330)||(162279-162330)
chr8 (236-315)||(3317792-3317870)
chr8 (236-315)||(5821807-5821885)
chr8 (236-315)||(9237477-9237556)
chr8 (236-315)||(21524409-21524488)
chr8 (271-330)||(23152271-23152330)
chr8 (280-330)||(9237310-9237360)
chr8 (280-325)||(3317542-3317587)
chr8 (238-291)||(3317977-3318030)
chr8 (238-291)||(4325660-4325713)
chr8 (280-325)||(6513558-6513603)
chr8 (246-315)||(12823370-12823439)
chr8 (246-315)||(23152541-23152610)
chr8 (238-315)||(41387400-41387477)
chr8 (280-325)||(42984934-42984978)
chr8 (269-329)||(5881818-5881878)
chr8 (269-317)||(10397791-10397839)
chr8 (236-304)||(10398462-10398530)
[»] chr3 (72 HSPs)
chr3 (182-291)||(38771441-38771550)
chr3 (182-291)||(12061750-12061859)
chr3 (182-291)||(28004470-28004579)
chr3 (182-291)||(28033247-28033356)
chr3 (182-291)||(1364471-1364580)
chr3 (182-291)||(2800686-2800795)
chr3 (182-291)||(6950890-6950999)
chr3 (182-291)||(25629588-25629697)
chr3 (182-291)||(53204587-53204696)
chr3 (182-291)||(18024800-18024909)
chr3 (182-291)||(18270800-18270909)
chr3 (182-291)||(22977106-22977215)
chr3 (182-291)||(42213355-42213464)
chr3 (182-291)||(51891123-51891232)
chr3 (185-289)||(19794602-19794706)
chr3 (196-291)||(6098525-6098620)
chr3 (182-291)||(1070036-1070145)
chr3 (182-258)||(30385385-30385461)
chr3 (182-291)||(10817607-10817716)
chr3 (182-291)||(17933950-17934058)
chr3 (182-291)||(30267594-30267703)
chr3 (182-291)||(40941685-40941794)
chr3 (182-243)||(42592635-42592696)
chr3 (280-327)||(1364268-1364315)
chr3 (238-329)||(40941801-40941892)
chr3 (182-238)||(23090445-23090501)
chr3 (236-315)||(30385314-30385393)
chr3 (269-328)||(38771617-38771676)
chr3 (238-324)||(2800593-2800679)
chr3 (280-330)||(18270625-18270675)
chr3 (280-330)||(28004264-28004314)
chr3 (271-329)||(53204842-53204900)
chr3 (269-330)||(12061622-12061683)
chr3 (238-315)||(18024698-18024775)
chr3 (238-315)||(42592533-42592610)
chr3 (269-330)||(51891299-51891360)
chr3 (236-328)||(2800787-2800879)
chr3 (269-329)||(53204522-53204581)
chr3 (236-315)||(18024729-18024808)
chr3 (269-328)||(30267391-30267450)
chr3 (269-328)||(30267770-30267829)
chr3 (236-315)||(42592564-42592643)
chr3 (269-328)||(51890980-51891039)
chr3 (236-315)||(53204688-53204766)
chr3 (282-328)||(6951157-6951203)
chr3 (280-330)||(19794785-19794835)
chr3 (280-329)||(12062016-12062065)
chr3 (271-328)||(13867674-13867731)
chr3 (269-330)||(17933822-17933883)
chr3 (269-330)||(18024916-18024977)
chr3 (238-315)||(22977209-22977286)
chr3 (280-329)||(28033434-28033483)
chr3 (280-325)||(38771240-38771285)
chr3 (269-329)||(10817511-10817571)
chr3 (239-315)||(25629504-25629580)
chr3 (269-329)||(42592399-42592459)
chr3 (236-315)||(1069965-1070044)
chr3 (280-327)||(6098400-6098447)
chr3 (236-315)||(6950991-6951070)
chr3 (269-315)||(10817614-10817660)
chr3 (280-330)||(22976979-22977029)
chr3 (280-330)||(30385179-30385229)
chr3 (280-329)||(1069831-1069880)
chr3 (269-326)||(18024567-18024624)
chr3 (269-330)||(25629429-25629490)
chr3 (280-329)||(28033042-28033091)
chr3 (280-329)||(42213150-42213199)
chr3 (238-291)||(42213471-42213524)
chr3 (238-291)||(51891046-51891099)
chr3 (269-317)||(18270976-18271024)
chr3 (236-304)||(40941625-40941693)
chr3 (280-328)||(42213542-42213590)
[»] chr6 (54 HSPs)
chr6 (182-291)||(10286333-10286442)
chr6 (182-291)||(32224048-32224157)
chr6 (185-291)||(31038507-31038613)
chr6 (182-291)||(1292757-1292866)
chr6 (182-291)||(8939012-8939121)
chr6 (182-291)||(5645612-5645721)
chr6 (182-291)||(19048401-19048510)
chr6 (182-291)||(7829316-7829425)
chr6 (182-291)||(8286437-8286546)
chr6 (182-291)||(29048439-29048548)
chr6 (182-291)||(29835973-29836082)
chr6 (182-258)||(6888926-6889002)
chr6 (196-291)||(29836212-29836307)
chr6 (182-291)||(30860046-30860155)
chr6 (238-328)||(18700401-18700491)
chr6 (269-330)||(8938884-8938945)
chr6 (269-330)||(19048654-19048715)
chr6 (271-328)||(29048313-29048370)
chr6 (269-328)||(10286569-10286628)
chr6 (281-328)||(15833495-15833542)
chr6 (271-328)||(5645546-5645603)
chr6 (280-329)||(5645876-5645925)
chr6 (269-330)||(6888781-6888842)
chr6 (269-330)||(8286309-8286370)
chr6 (238-315)||(30860240-30860317)
chr6 (280-328)||(1292553-1292601)
chr6 (269-329)||(30859919-30859979)
chr6 (280-328)||(31038321-31038369)
chr6 (269-328)||(6889101-6889160)
chr6 (236-315)||(8939113-8939192)
chr6 (269-328)||(26841605-26841664)
chr6 (236-315)||(29048540-29048618)
chr6 (280-326)||(10286162-10286208)
chr6 (269-330)||(8286689-8286750)
chr6 (238-315)||(19048317-19048394)
chr6 (280-325)||(32223847-32223892)
chr6 (239-315)||(9899693-9899769)
chr6 (281-325)||(12153577-12153621)
chr6 (269-325)||(18693635-18693691)
chr6 (269-329)||(19048243-19048303)
chr6 (269-329)||(29048692-29048752)
chr6 (236-304)||(30860147-30860215)
chr6 (280-330)||(7829503-7829554)
chr6 (236-315)||(8286538-8286616)
chr6 (269-328)||(9899560-9899619)
chr6 (271-330)||(29836375-29836434)
chr6 (280-330)||(7873641-7873690)
chr6 (280-330)||(32224235-32224285)
chr6 (280-329)||(1292884-1292933)
chr6 (182-215)||(7873846-7873879)
chr6 (238-291)||(10286509-10286562)
chr6 (280-329)||(31038772-31038821)
chr6 (238-291)||(32224164-32224217)
chr6 (182-214)||(18700575-18700607)
[»] chr5 (74 HSPs)
chr5 (182-291)||(6172164-6172273)
chr5 (182-315)||(13476734-13476867)
chr5 (182-291)||(20841737-20841846)
chr5 (182-291)||(42381996-42382105)
chr5 (183-291)||(8127677-8127785)
chr5 (182-290)||(14858398-14858506)
chr5 (182-291)||(1156090-1156199)
chr5 (182-291)||(6131990-6132099)
chr5 (182-291)||(17094329-17094438)
chr5 (182-288)||(7277985-7278091)
chr5 (182-291)||(29906164-29906274)
chr5 (182-291)||(9438363-9438472)
chr5 (182-291)||(24100012-24100121)
chr5 (182-291)||(37812357-37812466)
chr5 (182-291)||(42026487-42026596)
chr5 (182-291)||(43476183-43476292)
chr5 (182-291)||(10503757-10503866)
chr5 (182-291)||(10570129-10570238)
chr5 (182-289)||(4349697-4349805)
chr5 (182-288)||(42381406-42381512)
chr5 (182-291)||(22803413-22803522)
chr5 (182-291)||(36442286-36442395)
chr5 (200-259)||(9040859-9040918)
chr5 (269-328)||(1156343-1156402)
chr5 (238-329)||(10570031-10570122)
chr5 (280-329)||(6132256-6132305)
chr5 (269-330)||(22803589-22803650)
chr5 (267-328)||(31369924-31369985)
chr5 (269-330)||(37812229-37812290)
chr5 (269-330)||(42026663-42026724)
chr5 (269-326)||(42381204-42381261)
chr5 (269-329)||(1155963-1156023)
chr5 (269-328)||(4349874-4349933)
chr5 (269-328)||(6172340-6172399)
chr5 (269-328)||(9040743-9040802)
chr5 (269-328)||(9438237-9438296)
chr5 (236-315)||(43476284-43476363)
chr5 (280-330)||(16791969-16792019)
chr5 (280-330)||(21289540-21289590)
chr5 (280-330)||(22803206-22803256)
chr5 (280-330)||(29905989-29906039)
chr5 (280-330)||(42026281-42026331)
chr5 (280-330)||(43476448-43476498)
chr5 (271-328)||(8127472-8127529)
chr5 (269-322)||(42381582-42381635)
chr5 (280-328)||(4349495-4349543)
chr5 (269-329)||(8127792-8127851)
chr5 (280-328)||(14858296-14858344)
chr5 (280-328)||(42381792-42381840)
chr5 (269-328)||(6131864-6131923)
chr5 (269-328)||(7277797-7277855)
chr5 (271-330)||(14858576-14858635)
chr5 (269-328)||(42382172-42382231)
chr5 (280-326)||(10504022-10504068)
chr5 (280-329)||(36442551-36442600)
chr5 (269-326)||(37812550-37812607)
chr5 (236-304)||(7278083-7278151)
chr5 (269-325)||(9040955-9041010)
chr5 (280-328)||(9438627-9438675)
chr5 (269-325)||(17094206-17094262)
chr5 (280-328)||(24100278-24100326)
chr5 (280-328)||(29906292-29906340)
chr5 (269-328)||(13476661-13476720)
chr5 (236-315)||(42026416-42026495)
chr5 (236-315)||(42381925-42382004)
chr5 (280-330)||(6171959-6172009)
chr5 (269-323)||(10570382-10570436)
chr5 (280-325)||(11987543-11987588)
chr5 (280-325)||(17094594-17094639)
chr5 (280-325)||(36442163-36442208)
chr5 (267-315)||(6132123-6132171)
chr5 (267-315)||(9438494-9438542)
chr5 (267-315)||(13476889-13476937)
chr5 (267-315)||(22803341-22803389)
[»] chr4 (52 HSPs)
chr4 (182-291)||(36611108-36611217)
chr4 (182-291)||(25764488-25764597)
chr4 (182-291)||(51949457-51949566)
chr4 (182-315)||(55013886-55014019)
chr4 (182-291)||(26107716-26107825)
chr4 (182-291)||(19630889-19630998)
chr4 (182-291)||(23329936-23330045)
chr4 (182-291)||(31208318-31208426)
chr4 (182-291)||(39899317-39899426)
chr4 (183-291)||(32155637-32155744)
chr4 (182-291)||(52766357-52766465)
chr4 (182-254)||(32617420-32617492)
chr4 (182-253)||(11822758-11822829)
chr4 (182-258)||(9100295-9100371)
chr4 (238-329)||(27509632-27509723)
chr4 (182-255)||(9203400-9203473)
chr4 (182-255)||(9207619-9207692)
chr4 (182-291)||(27509730-27509839)
chr4 (269-330)||(25764743-25764804)
chr4 (269-329)||(19630762-19630822)
chr4 (269-329)||(25764361-25764421)
chr4 (269-329)||(31208493-31208553)
chr4 (269-329)||(51949274-51949334)
chr4 (280-330)||(39899111-39899161)
chr4 (280-330)||(52766151-52766201)
chr4 (269-330)||(9203558-9203619)
chr4 (269-330)||(9207777-9207838)
chr4 (280-329)||(26107981-26108030)
chr4 (269-330)||(32617596-32617657)
chr4 (269-330)||(52766532-52766593)
chr4 (280-328)||(9100451-9100499)
chr4 (269-329)||(36611041-36611101)
chr4 (280-328)||(51949691-51949739)
chr4 (236-315)||(39899246-39899325)
chr4 (280-330)||(19631153-19631203)
chr4 (280-329)||(11822985-11823034)
chr4 (280-325)||(23329813-23329858)
chr4 (236-304)||(27509831-27509899)
chr4 (236-304)||(32617360-32617428)
chr4 (280-328)||(36611374-36611422)
chr4 (280-330)||(11822664-11822713)
chr4 (292-330)||(39899505-39899543)
chr4 (280-330)||(55014044-55014094)
chr4 (238-291)||(11822854-11822907)
chr4 (238-291)||(39899433-39899486)
chr4 (238-291)||(51949620-51949673)
chr4 (238-291)||(55013808-55013861)
chr4 (280-328)||(93606-93654)
chr4 (267-307)||(9203496-9203536)
chr4 (267-307)||(9207715-9207755)
chr4 (267-315)||(19631020-19631068)
chr4 (236-304)||(52766297-52766365)
[»] scaffold0096 (3 HSPs)
scaffold0096 (182-291)||(4964-5073)
scaffold0096 (269-324)||(4873-4928)
scaffold0096 (280-326)||(5198-5244)
[»] chr1 (34 HSPs)
chr1 (182-291)||(10579498-10579607)
chr1 (182-291)||(17738380-17738489)
chr1 (182-291)||(48225146-48225255)
chr1 (182-291)||(52051356-52051465)
chr1 (182-291)||(11653002-11653111)
chr1 (182-291)||(13834837-13834946)
chr1 (182-291)||(17750361-17750470)
chr1 (182-291)||(14499460-14499569)
chr1 (182-291)||(7204131-7204239)
chr1 (18-68)||(13162949-13162999)
chr1 (269-328)||(11652876-11652935)
chr1 (271-326)||(13834713-13834768)
chr1 (280-329)||(10579293-10579342)
chr1 (280-329)||(17738676-17738725)
chr1 (269-330)||(17750537-17750598)
chr1 (280-329)||(48225404-48225453)
chr1 (280-328)||(14499587-14499635)
chr1 (269-325)||(52051233-52051289)
chr1 (269-329)||(52051644-52051704)
chr1 (269-328)||(7203958-7204017)
chr1 (269-328)||(10579674-10579733)
chr1 (236-315)||(11653103-11653182)
chr1 (280-327)||(17750127-17750174)
chr1 (280-325)||(14499259-14499304)
chr1 (271-328)||(17738254-17738311)
chr1 (280-325)||(28999440-28999485)
chr1 (269-329)||(7204306-7204366)
chr1 (239-315)||(17738515-17738591)
chr1 (236-315)||(10579427-10579506)
chr1 (236-315)||(17750290-17750369)
chr1 (280-320)||(11653267-11653307)
chr1 (18-62)||(13205882-13205926)
chr1 (280-328)||(28991024-28991072)
chr1 (269-329)||(48225019-48225079)
[»] scaffold0120 (3 HSPs)
scaffold0120 (182-291)||(27795-27904)
scaffold0120 (280-328)||(27669-27717)
scaffold0120 (236-315)||(27896-27975)
[»] scaffold0012 (3 HSPs)
scaffold0012 (182-291)||(144922-145031)
scaffold0012 (280-329)||(144717-144766)
scaffold0012 (236-315)||(144851-144930)
[»] scaffold0026 (3 HSPs)
scaffold0026 (182-291)||(99803-99912)
scaffold0026 (280-330)||(99990-100040)
scaffold0026 (280-330)||(99597-99647)
[»] scaffold0295 (3 HSPs)
scaffold0295 (182-288)||(7963-8069)
scaffold0295 (269-329)||(8215-8275)
scaffold0295 (72-104)||(7868-7900)
[»] scaffold0009 (2 HSPs)
scaffold0009 (182-291)||(6798-6907)
scaffold0009 (281-330)||(6670-6719)
[»] scaffold0352 (3 HSPs)
scaffold0352 (182-291)||(11201-11309)
scaffold0352 (269-329)||(11134-11194)
scaffold0352 (280-330)||(11434-11484)
[»] scaffold0135 (21 HSPs)
scaffold0135 (182-255)||(5698-5771)
scaffold0135 (182-255)||(9913-9986)
scaffold0135 (182-255)||(14128-14201)
scaffold0135 (182-255)||(18343-18416)
scaffold0135 (182-255)||(22558-22631)
scaffold0135 (182-255)||(26773-26846)
scaffold0135 (182-255)||(1483-1556)
scaffold0135 (269-330)||(5856-5917)
scaffold0135 (269-330)||(10071-10132)
scaffold0135 (269-330)||(14286-14347)
scaffold0135 (269-330)||(18501-18562)
scaffold0135 (269-330)||(22716-22777)
scaffold0135 (269-330)||(26931-26992)
scaffold0135 (280-330)||(1652-1702)
scaffold0135 (236-307)||(5763-5834)
scaffold0135 (236-307)||(9978-10049)
scaffold0135 (236-307)||(14193-14264)
scaffold0135 (236-307)||(18408-18479)
scaffold0135 (236-307)||(22623-22694)
scaffold0135 (236-307)||(26838-26909)
scaffold0135 (267-307)||(1579-1619)
[»] scaffold0017 (1 HSPs)
scaffold0017 (269-326)||(172910-172967)
[»] scaffold0108 (1 HSPs)
scaffold0108 (280-328)||(11782-11830)
[»] scaffold0237 (1 HSPs)
scaffold0237 (271-330)||(26193-26252)


Alignment Details
Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 315
Target Start/End: Complemental strand, 39384011 - 39383878
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  39384011 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagggaccaaaacgaaagcaaaaagtaagttaaaggacca 39383912  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| ||||| ||||||| || |||||||    
T  39383911 aaacgaaaccaaaaagtaagttaagggaccaaaa 39383878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 8735947 - 8736056
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||| |||  ||||||||||||| ||    
T  8735947 cttaactctaatacattcatcctaacataaaggaccaaagtagttgacggaggaagagttaatggaccaaaacgaaatcaaaaagtaagttaaaggacca 8736046  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  8736047 aaacgaaact 8736056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 182 - 315
Target Start/End: Original strand, 19069803 - 19069937
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattg-taagttaaaggagc 280  Q
    ||||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  | |||||||||||| |    
T  19069803 cttaactttattacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagttaagttaaaggacc 19069902  T
Q  281 aaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||| ||||| ||||||| || |||||||    
T  19069903 aaaacgaaaccaaaaagtaagttaagggaccaaaa 19069937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 24417304 - 24417413
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||  ||||||||||||| ||    
T  24417304 cttaactctaatacattcattataacataaaggaccaaagtggttgacagaggaagagttaagggaccaaaacgaaatcaaaaagtaagttaaaggacca 24417403  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  24417404 aaacgaaact 24417413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 22151684 - 22151793
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  22151684 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 22151783  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  22151784 aaacgaaact 22151793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 22207548 - 22207657
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  22207548 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 22207647  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  22207648 aaacgaaact 22207657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 23351210 - 23351101
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||  |||   |||||||| ||| ||    
T  23351210 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaatggaccaaaacgaaaccaaaaaataagttaagggacca 23351111  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  23351110 aaacgaaact 23351101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 36701593 - 36701484
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||  |||  ||||||||||||| ||    
T  36701593 cttaactctaatacattcatcataacataaaggaccaaagtggttgacggaggaaaagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 36701494  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  36701493 aaaagaaact 36701484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 36782820 - 36782929
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||||||| ||    
T  36782820 cttaactctaatacattcatccgaacataaatgaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaaaggacca 36782919  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  36782920 aaacgaaact 36782929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 11687210 - 11687316
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| || |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  11687210 cttaactctaatacattcatcctaacataaaggatcaaagtggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaacggacca 11687309  T
Q  282 aaacgaa 288  Q
    |||||||    
T  11687310 aaacgaa 11687316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 45057716 - 45057607
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  45057716 cttaactctaatagattcattctaacataaaggatcaaagtggttgacggaagaagagttaagggaccaaaatgaaaccaaaaaataagttaagggacca 45057617  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  45057616 aaacgaaact 45057607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 38340787 - 38340726
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38340787 agttaagggaccaaaacgaaactaaaaaataagttaaggaaccaaaagagtaattaagccta 38340726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 22207556 - 22207464
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||| |||||||||||||| |||   |||||||| ||| ||||||||||| |||||||||||||  | |||||||||||||||||||||    
T  22207556 agagttaag-gaccaaaacgaaatcaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaaaggaccaaaagagtaattaagcct 22207464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 45057600 - 45057539
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  45057600 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 45057539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 36701417 - 36701357
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  36701417 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 36701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 11687386 - 11687447
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||| ||||||||||||||||||| || ||||||| ||||||||||||||    
T  11687386 agttaagggaccaaaatgaaactaaaaaataagttaagggaccaaaaaagtaattaagccta 11687447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 36701750 - 36701799
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  36701750 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 36701799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 39383862 - 39383805
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  39383862 ttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 39383805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 11687065 - 11687006
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| |||||||||||||  | ||||||||||||||||||||    
T  11687065 agttaagggaccaaaacgaaaccaaaaaataagttaaaggaccaaaagagtaattaagcc 11687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 23351202 - 23351281
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||||||||||||||||  |||   |||||||| ||| ||||| ||||| ||||||||||||| || |||||||    
T  23351202 agagttaagtgaccaaaacgaaaccaaaaaataagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaa 23351281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 24417491 - 24417538
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||    
T  24417491 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagc 24417538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 22151860 - 22151918
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| ||||||||||||    
T  22151860 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagc 22151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 22207775 - 22207833
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| ||||||||||||    
T  22207775 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagc 22207833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 8735790 - 8735741
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| |||||||||||||  | |||||||||||||||||||||    
T  8735790 caaaacgaaaccaaaaaataagttaaaggaccaaaagagtaattaagcct 8735741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 8736123 - 8736184
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||||||| || ||||||||| ||| || ||||||||||||||||||||||    
T  8736123 agttaagggaccaaaacgacaccaaaaaataaattaagggaccaaaagagtaattaagccta 8736184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 19069951 - 19070012
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||| ||||| ||||||||||||| || ||||||| ||||||||||||||    
T  19069951 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaaaagtaattaagccta 19070012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 19105598 - 19105659
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||| ||||  ||||||||||||| || ||||||||||||||||||||||    
T  19105598 agttaagggaccaaaatgaaatcaaaaaataagttaagggaccaaaagagtaattaagccta 19105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 23350974 - 23350915
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || || ||| |||||||||||||    
T  23350974 agttaagggaccaaaacgaaaccaaaaaataagttaagggactaaatgagtaattaagcc 23350915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 45057860 - 45057919
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| |||||| |||| ||||||||||||| || | ||||||||||||||||||    
T  45057860 agttaagggatcaaaacaaaaccaaaaaataagttaagggatcaaaagagtaattaagcc 45057919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 38340931 - 38340893
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaa 220  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  38340931 cttaactctaatacattcattctaacataaaggaccaaa 38340893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 38340925 - 38340971
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  38340925 agttaagggaccaaaacgaaaccaaaaaataagttaaggaaccaaaa 38340971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 23351355 - 23351415
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||| ||||| ||||||||||||| || | |||| ||||||||||||||    
T  23351355 agttaagggaccaaaaggaaaccaaaaaataagttaagggatcaaatgagtaattaagcct 23351415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 24417312 - 24417244
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  24417312 agagttaagggaccaaaatgaaacaaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 24417244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 330
Target Start/End: Original strand, 30785938 - 30786086
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||  |||  ||||||||| ||| ||    
T  30785938 cttaactctaatacattcatcctaacataaaggaccaaagtagttgacggaggaagagttaatggaccaaaacgaaaccaaaaagtaagttaagggacca 30786037  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| || ||||||||||||| |||||||||| | ||||||||||||    
T  30786038 aaacgacaccaaaaaataagttaaggaaccaaaaaaataattaagccta 30786086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 6645756 - 6645647
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  6645756 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 6645657  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  6645656 aaacgaaact 6645647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 27516394 - 27516285
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  27516394 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 27516295  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  27516294 aaacgaaact 27516285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 23461270 - 23461372
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||| ||    
T  23461270 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaatcaaaaagtaagttaaaggacca 23461369  T
Q  282 aaa 284  Q
    |||    
T  23461370 aaa 23461372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 45001288 - 45001179
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||   |||||||| ||| ||    
T  45001288 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaatcaaaaaataagttaagggacca 45001189  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  45001188 aaacgaaact 45001179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 7032040 - 7031931
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  7032040 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 7031941  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  7031940 aaacgaaact 7031931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 15129909 - 15129800
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  15129909 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 15129810  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  15129809 aaacgaaact 15129800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 18904865 - 18904756
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  18904865 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 18904766  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  18904765 aaacgaaact 18904756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 26892699 - 26892590
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||| | ||    
T  26892699 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaagcacca 26892600  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  26892599 aaatgaaact 26892590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 26898138 - 26898029
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||| | ||    
T  26898138 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaagcacca 26898039  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  26898038 aaatgaaact 26898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 36099559 - 36099450
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  36099559 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 36099460  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  36099459 aaacgaaact 36099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 38578036 - 38578145
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||| |||  ||||||||||||| ||    
T  38578036 cttaactcgaatacattcatcctaacataaaggaccaaagtagttgacggaggaagagttaatggaccaaaacgaaatcaaaaagtaagttaaaggacca 38578135  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  38578136 aaacgaaact 38578145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 28957968 - 28958070
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||| |||||||| |||  ||||||||||||| ||    
T  28957968 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggacgaagagctaagggaccagaacgaaatcaaaaagtaagttaaaggacca 28958067  T
Q  282 aaa 284  Q
    |||    
T  28958068 aaa 28958070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 35251731 - 35251629
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  35251731 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggagaaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 35251632  T
Q  282 aaa 284  Q
    |||    
T  35251631 aaa 35251629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 31309320 - 31309211
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||  |||||||||||||  |||  ||||||||||||| ||    
T  31309320 cttaactctaatacattcatcctaatataaatgaccaaagtggttgacggaggaagagttaatggaccaaaacgaaaccaaaaagtaagttaaaggacca 31309221  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  31309220 aaaggaaact 31309211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 31309590 - 31309514
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaa 258  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  31309590 cttaactataatatattcatcctaacataatggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaa 31309514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 7182584 - 7182476
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  7182584 cttaactctaatacagtcatc-taacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaaataagttaagggacca 7182486  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  7182485 aaacgaaact 7182476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 39110247 - 39110356
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| | | ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  39110247 cttaactctaatacattcatcctagcataaaggaccaaagtggttgatgaaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 39110346  T
Q  282 aaacgaaact 291  Q
    |||| |||||    
T  39110347 aaacaaaact 39110356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 7032155 - 7032216
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  7032155 agttaagggaccaaaacgaaactaaaaaataagttaagggaccaaaagagtaattaagccta 7032216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 7031864 - 7031803
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  7031864 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 7031803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 18904658 - 18904597
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  18904658 agttaagggaccaaaacgaaacaaaaaaataagttaagggaccaaaagagtaattaagccta 18904597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 23461386 - 23461475
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    ||||||| |||||||||||||  |||   |||||||| ||| |||||| |||| ||||||||||||| || |||||||||||||||||||    
T  23461386 agttaagggaccaaaacgaaaccaaaaattaagttaagggaccaaaacaaaaccaaaaaataagttaagggaccaaaagagtaattaagc 23461475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 27516218 - 27516157
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  27516218 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 27516157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 45001112 - 45001051
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||||||| ||||||||||| ||||||||||||| || |||||| |||||||||||||||    
T  45001112 agttaaaggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagccta 45001051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 28958111 - 28958170
Alignment:
Q  266 gtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||    
T  28958111 gtaagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 28958170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 39110255 - 39110176
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||||||| ||||||||||| ||||||||||||| || |||||||    
T  39110255 agagttaagggaccaaaacgaaaccaaaaaataagttaaaggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 39110176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 18905011 - 18905069
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  18905011 ttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 18905069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 27516551 - 27516601
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  27516551 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 27516601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 31309777 - 31309827
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  31309777 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 31309827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 10414084 - 10413995
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    ||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||| ||| || ||||||| |||||||||||    
T  10414084 agttaagggaccaaaacgaaacaaaaaaataagttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaatagtaattaagc 10413995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 15130053 - 15130114
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || | ||||||||||||||||||||    
T  15130053 agttaagggaccaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagccta 15130114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 36099352 - 36099291
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| |||||||||||||||    
T  36099352 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagccta 36099291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 6645580 - 6645520
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| |  |||||||||||||||||||||    
T  6645580 agttaagggaccaaaacgaaaccaaaaaataagttaagagaccaaaagagtaattaagcct 6645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 7182698 - 7182758
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  7182698 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaacgagtaattaagcct 7182758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 15129691 - 15129643
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  15129691 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 15129643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 26892523 - 26892463
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  26892523 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagcaattaagcct 26892463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 26897962 - 26897902
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||| ||||||||||    
T  26897962 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagcaattaagcct 26897902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 35251555 - 35251495
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||| ||||||| || |||||||||||||||||||||    
T  35251555 agttaagggaccaaaacgaaaccaaaaattaagttaagggaccaaaagagtaattaagcct 35251495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 30785751 - 30785704
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||    
T  30785751 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagc 30785704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 38578183 - 38578242
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||| |||||||| || ||||||||||||| || ||||||||||||||||||||||    
T  38578183 ttaagggaccaaaacgacaccaaaaaataagttaagggaccaaaagagtaattaagccta 38578242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 35251887 - 35251933
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  35251887 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaag 35251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 15129793 - 15129716
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| ||||||| || |||||||    
T  15129793 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaa 15129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 28957854 - 28957797
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||| ||| ||||||||||| ||||||||| ||| || ||||||||||||||||||    
T  28957854 agttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaag 28957797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 31369573 - 31369512
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||  ||||||||||||| || ||||||||| ||||||||||||    
T  31369573 agttaagggaccaaaacgaaatcaaaaaataagttaggggaccaaaagaataattaagccta 31369512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 35589165 - 35589226
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||||| || | ||||||||||||| || ||||||||||||||||||||||    
T  35589165 agttaagggaccaaaacaaagccaaaaaataagttaagggaccaaaagagtaattaagccta 35589226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 36099561 - 36099629
Alignment:
Q  247 accaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||||||| |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  36099561 accaaaacgaaatcaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 36099629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 39110131 - 39110071
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||| ||||| ||||||||||||| || |||||| ||||||||||||||    
T  39110131 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatgagtaattaagcct 39110071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 39110423 - 39110483
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| |||||||||||||  | |||||| ||||||||||||||    
T  39110423 agttaagggaccaaaacgaaaccaaaaaataagttaatggaccaaatgagtaattaagcct 39110483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 7032032 - 7032110
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   ||||||||  || ||||||||||| ||||||||||||| || |||||||    
T  7032032 agagttaag-gaccaaaacgaaatcaaaaaataagttaagtgaccaaaacgaaaccaaaaaataagttaagggaccaaaa 7032110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 7182407 - 7182348
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||| ||||||||||| |||||||||||||  | |||||| |||||||||||||||    
T  7182407 ttaagggaccaaaacgaaaccaaaaaataagttaatggaccaaatgagtaattaagccta 7182348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 15129901 - 15129979
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   ||||||||  || ||||||||||| ||||||||||||| || |||||||    
T  15129901 agagttaag-gaccaaaacgaaatcaaaaaataagttaagtgaccaaaacgaaaccaaaaaataagttaagggaccaaaa 15129979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 18904857 - 18904935
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   ||||||||  || ||||||||||| ||||||||||||| || |||||||    
T  18904857 agagttaag-gaccaaaacgaaatcaaaaaataagttaagtgaccaaaacgaaaccaaaaaataagttaagggaccaaaa 18904935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 23461278 - 23461200
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||||||| ||||||||||| ||||||||||||| || |||||||    
T  23461278 agagttaagggaccaaaatgaaaccaaaaaataagttaaaggaccaaaacgaaac-aaaaaataagttaagggaccaaaa 23461200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 26892691 - 26892770
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  26892691 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 26892770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 45001280 - 45001358
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   |||||||| ||| ||||||||||  ||||||||||||| || |||||||    
T  45001280 agagttaag-gaccaaaacgaaatcaaaaaataagttaagggaccaaaacgaaatcaaaaaataagttaagggaccaaaa 45001358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 26892855 - 26892905
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||| ||||||| ||||    
T  26892855 caaaacgaaaccaaaaaataagttaagggaccaaaagaataattaaaccta 26892905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 26898294 - 26898344
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||| ||||||| ||||    
T  26898294 caaaacgaaaccaaaaaataagttaagggaccaaaagaataattaaaccta 26898344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 31309414 - 31309464
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||| ||| || |||||| |||||||||||||||    
T  31309414 caaaacgaaaccaaaaaataacttaagggaccaaacgagtaattaagccta 31309464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 31309615 - 31309681
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  31309615 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 31309681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 36099443 - 36099377
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| |||||||    
T  36099443 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagtta 36099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 10414337 - 10414394
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||| ||| |||||| |||| |||||||||||||  | ||||||||||||||||||    
T  10414337 agttaagggaccaaaacaaaaccaaaaaataagttaaaggaccaaaagagtaattaag 10414394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 18904741 - 18904672
Alignment:
Q  246 gaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| ||||||| || |||||||    
T  18904741 gaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaa 18904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 31309584 - 31309661
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  31309584 agttaagagaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 31309661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 38577878 - 38577833
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| |||||||||||||  | |||||||||||||||||    
T  38577878 caaaacgaaaccaaaaaataagttaaaggaccaaaagagtaattaa 38577833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 39110214 - 39110145
Alignment:
Q  246 gaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  39110214 gaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 39110145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 6645881 - 6645929
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || | |||||| |||||||||||    
T  6645881 caaaacgaaaccaaaaaataagttaagggatcaaaagtgtaattaagcc 6645929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 27516418 - 27516466
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||||| ||||||||||| | ||||||||||| || |||||||    
T  27516418 taagttaaaggaccaaaacgaaaccacaaaataagttaagggaccaaaa 27516466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 31309119 - 31309151
Alignment:
Q  72 ttaattactcttttggtctcttaactattaaaa 104  Q
    |||||||||||||||||| ||||||||||||||    
T  31309119 ttaattactcttttggtcccttaactattaaaa 31309151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 315
Target Start/End: Complemental strand, 18572 - 18439
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  18572 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 18473  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| ||||||||||||| || |||||||    
T  18472 aaacgaaaccaaaaaataagttaagggaccaaaa 18439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 18425 - 18334
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| || |||||| |||  | |||||||||||||||||||||    
T  18425 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaataaataaattaaaggaccaaaagagtaattaagcct 18334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 18716 - 18775
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  18716 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 18775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 18564 - 18642
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||| |||   ||||||||  || ||||||||||||||||||||||||| || |||||||    
T  18564 agagttaag-gaccaaaatgaaatcaaaaaataagttaagtgaccaaaacgaaactaaaaaataagttaagggaccaaaa 18642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 82)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 315
Target Start/End: Complemental strand, 4881346 - 4881213
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  4881346 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 4881247  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| ||||||||||||| ||||||||||    
T  4881246 aaacgaaaccaaaaaataagttaaggaaccaaaa 4881213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 315
Target Start/End: Original strand, 5876607 - 5876740
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  5876607 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 5876706  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| ||||||||||||| || |||||||    
T  5876707 aaacgaaaccaaaaaataagttaagggaccaaaa 5876740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 21524480 - 21524589
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| |||||||||||||  |||  ||||||||||||| ||    
T  21524480 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggaaaagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 21524579  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  21524580 aaacgaaact 21524589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 23152508 - 23152399
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||  |||  |||||||||||||  |    
T  23152508 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagaattaagggaccaaaacgaaactaaaaagtaagttaaaggacga 23152409  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  23152408 aaacgaaact 23152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 162487 - 162595
Alignment:
Q  183 ttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaa 282  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||  |||   |||||||||||| |||    
T  162487 ttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacaaaaccaaaaaataagttaaaggaccaa 162586  T
Q  283 aacgaaact 291  Q
    |||||||||    
T  162587 aacgaaact 162595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 11901318 - 11901424
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||  |||  ||||||||||||| ||    
T  11901318 cttaactctaatacattcatcctaacataaatgaccaaagtggttgacggaggaagagttaagggagcaaaacgaaaccaaaaagtaagttaaaggacca 11901417  T
Q  282 aaacgaa 288  Q
    |||||||    
T  11901418 aaacgaa 11901424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 35181923 - 35182029
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  35181923 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaacggacca 35182022  T
Q  282 aaacgaa 288  Q
    |||||||    
T  35182023 aaacgaa 35182029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 1259818 - 1259927
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  1259818 cttaactctaatacattcatcataacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaatggacca 1259917  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  1259918 aaatgaaact 1259927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 5821877 - 5821986
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  5821877 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggagaaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 5821976  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  5821977 aaacgaaact 5821986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 6513402 - 6513294
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  6513402 cttaactctaatacattcatcctaacataaaggactaaagtggttgacgaaggaagagttaag-gaccaaaacgaaaccaaaaagtaagttaaaggacca 6513304  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  6513303 aaacgaaact 6513294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 9237548 - 9237657
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  9237548 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 9237647  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  9237648 aaatgaaact 9237657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 41387375 - 41387266
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||  |||   |||||||||||| ||    
T  41387375 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggagaaagagttaagggaccaaaacgaaaccaaaaattaagttaaaggacca 41387276  T
Q  282 aaacgaaact 291  Q
    |||| |||||    
T  41387275 aaacaaaact 41387266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 45467664 - 45467555
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  45467664 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacgaaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 45467565  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  45467564 aaacgaaact 45467555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 5881642 - 5881749
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  5881642 cttaactctaatacattcatccgaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaatggacca 5881741  T
Q  282 aaacgaaa 289  Q
    ||||||||    
T  5881742 aaacgaaa 5881749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 10398522 - 10398630
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  10398522 cttaactctaatacattcatcctaacataaag-accaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 10398620  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  10398621 aaacgaaact 10398630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 29802418 - 29802317
Alignment:
Q  190 taatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaa 289  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||    
T  29802418 taatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaa 29802319  T
Q  290 ct 291  Q
    ||    
T  29802318 ct 29802317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 10397894 - 10397773
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  10397894 cttaactctaatacattcatcctaacataaag-accaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 10397796  T
Q  282 aaacgaaactaaaaaataagtta 304  Q
    |||  ||||  ||||||||||||    
T  10397795 aaagaaaacccaaaaataagtta 10397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 12850167 - 12850273
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||  |||  ||||||||| | | ||    
T  12850167 cttaactctaatacattcatcctaacataatggaccaaagtggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaacgaacca 12850266  T
Q  282 aaacgaa 288  Q
    |||||||    
T  12850267 aaacgaa 12850273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 14054992 - 14055098
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||||| || |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  14054992 cttaactctaatacattcatcctaacataaaggatcaaagaggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaacggacca 14055091  T
Q  282 aaacgaa 288  Q
    |||||||    
T  14055092 aaacgaa 14055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 35103423 - 35103529
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||||| || |||||||| |||||||||||||   ||  ||||||||| ||| ||    
T  35103423 cttaactctaatacattcatcctaacataaaggactaaaggggttgacggaggatgagttaagggaccaaaacgaaaccgaaaagtaagttaacggacca 35103522  T
Q  282 aaacgaa 288  Q
    |||||||    
T  35103523 aaacgaa 35103529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 3317862 - 3317970
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||||||||  |||||||||||||  |||   ||||||||||||  |    
T  3317862 cttaactctaatacattcatcctaacgtaaaggaccaaagtggttg-cggaggaagagttaaaggaccaaaacgaaacaaaaaaataagttaaaggacaa 3317960  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  3317961 aaacgaaact 3317970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 4325829 - 4325720
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  4325829 cttaactgtaatacattcatcctaacataaaggaccaaagtggttgtcggagaaagagttaagggaccaaaatgaaaccaaaaaataagttaagggacca 4325730  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  4325729 aaacgaaact 4325720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 12823440 - 12823510
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaa 252  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  12823440 cttaactataatacattcatcctaacataaagggccaaagtggttgacggaggaagagttaagggaccaaa 12823510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 42984747 - 42984853
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||| || || ||||||||||  |||  ||||||||| ||| |     
T  42984747 cttaactctaatacattcatcttaacataaaggaccaaagtggttgacggaggatgagttcagggatcaaaacgaaaccaaaaagtaagttaacggacct 42984846  T
Q  282 aaacgaa 288  Q
    |||||||    
T  42984847 aaacgaa 42984853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 5821993 - 5822084
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||| ||||||||| |||  |||  ||||||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  5821993 agttaagggaccaaaacaaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 5822084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 12823356 - 12823265
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||| |||||||||||||  |||  |||| |||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  12823356 agttaagggaccaaaacgaaaccaaacagtaatttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 12823265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 4325653 - 4325594
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4325653 agttaagggatcaaaacgaaactaaaaaataagttaagggaccaaaagagtaattaagcc 4325594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 21524324 - 21524274
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  21524324 caaaacgaaaccaaaaaataagttatgggaccaaaagagtaattaagccta 21524274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 4325973 - 4326034
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  4325973 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 4326034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 5821733 - 5821672
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  5821733 agttaagggaccaaaacgaaactaaaaaataagttaagggaccaatagagtaattaagccta 5821672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 29802219 - 29802158
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  29802219 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 29802158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 5876835 - 5876895
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  5876835 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 5876895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 21524656 - 21524716
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  21524656 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 21524716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 45467496 - 45467436
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  45467496 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 45467436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 12823614 - 12823673
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  12823614 agttaagggaccaaaacgaaacaaaaaaataagttaagggaccaaaagagtaattaagcc 12823673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 14055108 - 14055167
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| |||||||||||||||||||||||||  | ||||||||||||||||||||    
T  14055108 agttaagggaccaaaacgaaactaaaaaataagttaaaggaccaaaagagtaattaagcc 14055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 15304331 - 15304390
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  15304331 agttaatggatcaaaacgaaaccaaaaaataagttaggggaccaaaagagtaattaagcc 15304390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 15484700 - 15484759
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  15484700 agttaatggatcaaaacgaaaccaaaaaataagttaggggaccaaaagagtaattaagcc 15484759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 35103599 - 35103658
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||||||||||||||||| || | ||||||||||||||||||    
T  35103599 agttaagggaccaaaacgaaactaaaaaataagttaagggatcaaaagagtaattaagcc 35103658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 12850354 - 12850400
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  12850354 caaaacgaaactaaaaaataagttaagggaccaaaagagtaattaag 12850400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 29802581 - 29802631
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  29802581 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 29802631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 41387562 - 41387612
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  41387562 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 41387612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 3318037 - 3318098
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||||    
T  3318037 agttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaagccta 3318098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 12850023 - 12849962
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||| ||||||    
T  12850023 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaatttagccta 12849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 14054836 - 14054787
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  14054836 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 14054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 35181766 - 35181717
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  35181766 caaaacgaaaccaaaaaataaattaaggaaccaaaagagtaattaagcct 35181717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 2916844 - 2916892
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  2916844 caaaacgaaactaaaaaataagttaagggaccaaaaaagtaattaagcc 2916892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 10398697 - 10398757
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  10398697 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagcct 10398757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 11919656 - 11919704
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  11919656 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 11919704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 45467808 - 45467868
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| |||||| |||| ||||||||||||| || |||||||||||||||||||||    
T  45467808 agttaagggaccaaaacaaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 45467868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 5876521 - 5876462
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||| |||||| ||||||| ||||||||||||    
T  5876521 agttaagggaccaaaacgaaaccaaaaaataaattatgggaccaaaaaagtaattaagcc 5876462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 5881650 - 5881571
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  5881650 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 5881571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 6513394 - 6513473
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  6513394 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaaggtaccaaaa 6513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 35103431 - 35103352
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||| |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  35103431 agagttaagggaccaaaatgaaatcaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 35103352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 35103278 - 35103216
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaa-taagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||||||||||||||||| ||||||| |  ||||||||||||||||||||||    
T  35103278 agttaagggaccaaaacgaaactaaaaaaataagttaagagaccaaaagagtaattaagccta 35103216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 162662 - 162723
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||||||||||  |||||||||||| || ||| ||||||||||||||||||    
T  162662 agttaagggaccaaaacgaaacctaaaaataagttaagggacccaaagagtaattaagccta 162723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 6513227 - 6513167
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || | ||||||||||||||||||||    
T  6513227 agttaagggaccaaaacgaaaccaaaaaataagttaagg-atcaaaagagtaattaagccta 6513167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 9237664 - 9237741
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| ||||||| || |||||||    
T  9237664 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaa 9237741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 23152693 - 23152738
Alignment:
Q  283 aacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||    
T  23152693 aacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 23152738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 29802310 - 29802233
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| ||||||| || |||||||    
T  29802310 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaa 29802233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 11901173 - 11901125
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  11901173 caaaacgaaaccaaaaaataagttgagggaccaaaagagtaattaagcc 11901125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 11901494 - 11901554
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| |||||| |||| ||||||||||||| || ||||||| |||||||||||||    
T  11901494 agttaagggaccaaaaccaaaccaaaaaataagttaagggaccaaaaaagtaattaagcct 11901554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 23152531 - 23152579
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||||    
T  23152531 taagttaaaggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 23152579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 41387199 - 41387140
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||||||| |||||| |||| ||||||||||||| || ||||||||||| |||||||||    
T  41387199 agttaaaggaccaaaacaaaaccaaaaaataagttaagggaccaaaagagt-attaagcct 41387140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 162330 - 162279
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaacc-aaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||| |||||||||||||||||||    
T  162330 caaaacgaaaccaaaaaataagttaagggaccaaaaagagtaattaagccta 162279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 3317870 - 3317792
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   |||||||| | | ||||||||||| ||||||||||||| || |||||||    
T  3317870 agagttaag-gaccaaaacgaaatcaaaaaataagttaatgaaccaaaacgaaaccaaaaaataagttaagggaccaaaa 3317792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 5821885 - 5821807
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   ||||||||  || ||||||||||| ||||||||||||| || |||||||    
T  5821885 agagttaag-gaccaaaacgaaatcaaaaaataagttaagtgaccaaaacgaaaccaaaaaataagttaagggaccaaaa 5821807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 9237556 - 9237477
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  9237556 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 9237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 21524488 - 21524409
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||| |||   |||||||| ||| ||||||||||| |||||||| |||| || |||||||    
T  21524488 agagttaagggaccaaaatgaaatcaaaaaataagttaagggatcaaaacgaaaccaaaaaataggttaagggaccaaaa 21524409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 23152330 - 23152271
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||| ||||||||||| ||||||||  ||| || ||||||||||||||||||||||    
T  23152330 ttaagggaccaaaacgaaaccaaaaaatatattaagggaccaaaagagtaattaagccta 23152271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 9237360 - 9237310
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||| ||||| ||||||||| ||| || ||||||||||||||||||||||    
T  9237360 caaaatgaaaccaaaaaataaattaagggaccaaaagagtaattaagccta 9237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 3317587 - 3317542
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||| ||| || |||||||||||||||||    
T  3317587 caaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaa 3317542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 3317977 - 3318030
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||| |||  ||||||||| ||| ||||||||||||    
T  3317977 agttaagggaccaaaacgaaatcaaaaagtaagttaagggaccaaaacgaaact 3318030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4325713 - 4325660
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||| |||  ||||||||| ||| ||||||||||||    
T  4325713 agttaagggaccaaaacgaaatcaaaaagtaagttaagggaccaaaacgaaact 4325660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 6513558 - 6513603
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||    
T  6513558 caaaacgaaatcaaaaaataagttaagggaccaaaagagtaattaa 6513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 12823439 - 12823370
Alignment:
Q  246 gaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||| |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  12823439 gaccaaaacaaaatcaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 12823370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 23152541 - 23152610
Alignment:
Q  246 gaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  23152541 gaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 23152610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 41387400 - 41387477
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| ||| |||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  41387400 agttaagggactaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 41387477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 42984934 - 42984978
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||    
T  42984934 caaaacgaaactaaaaaataagttaagggaccaaaa-agtaattaa 42984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 5881818 - 5881878
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||| ||| ||||||||||||| || |||||| || |||||||||||    
T  5881818 agttaagggaccaaaacgtaacaaaaaaataagttaggggaccaaatgaataattaagcct 5881878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 10397839 - 10397791
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaaga 317  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||    
T  10397839 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaaga 10397791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 10398530 - 10398462
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||| ||||||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  10398530 agagttaagggaccgaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 10398462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 38771441 - 38771550
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||| ||    
T  38771441 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaatcaaaaagtaagttaaaggatca 38771540  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  38771541 aaacgaaact 38771550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 12061859 - 12061750
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||| |||  ||||||||||||| ||    
T  12061859 cttaactctaatacattcatcctaacataaaggaccaaagtagttgacggaggaagagttaatggaccaaaacgaaatcaaaaagtaagttaaaggacca 12061760  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  12061759 aaacgaaact 12061750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 28004470 - 28004579
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  |||| |||||||| ||    
T  28004470 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaaattaaaggacca 28004569  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  28004570 aaacgaaact 28004579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 28033247 - 28033356
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  28033247 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaagggacca 28033346  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  28033347 aaacgaaact 28033356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 1364471 - 1364580
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||||||| ||    
T  1364471 cttaactttaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaattaagttaaaggatca 1364570  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  1364571 aaacgaaact 1364580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 2800795 - 2800686
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  2800795 cttaactctaatacattcatcctaacataaaggaccaaagtggttaacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 2800696  T
Q  282 aaacgaaact 291  Q
    |||| |||||    
T  2800695 aaacaaaact 2800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 6950999 - 6950890
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  |||||||||| ||  |    
T  6950999 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaatgataa 6950900  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  6950899 aaacgaaact 6950890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 25629697 - 25629588
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  25629697 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 25629598  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  25629597 aaacgaaact 25629588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 53204696 - 53204587
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  53204696 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggagaaagagttaagggaccaaaacgaaaccaaaaagtaagttaagggacca 53204597  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  53204596 aaacgaaact 53204587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 18024800 - 18024909
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  18024800 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 18024899  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  18024900 aaacgaaact 18024909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 18270800 - 18270909
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||  |||  ||||||||||||| ||    
T  18270800 cttaactctaatacattcatcataacataaaggaccaaagtggttgacggaggaagagttaagggaccaaagcgaaaccaaaaagtaagttaaaggacca 18270899  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  18270900 aaaagaaact 18270909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 22977215 - 22977106
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||  |||  ||||||||||||| ||    
T  22977215 cttaactttaatacattcatcctaacataaaagaccaaagtggttgacggaggaagagttaagggatcaaaacgaaaccaaaaagtaagttaaaggacca 22977116  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  22977115 aaacgaaact 22977106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 42213355 - 42213464
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||| ||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  42213355 cttaactttaatacattcatcctaacataaaagtccaaagtggttgacggaggaagagttaagggaccaaaacgaaactaaaaagtaagttaaaggacca 42213454  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  42213455 aaacgaaact 42213464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 51891123 - 51891232
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  51891123 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaacaaaaaaataagttaagggacca 51891222  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  51891223 aaacgaaact 51891232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 19794602 - 19794706
Alignment:
Q  185 aactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaa 284  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| |||||    
T  19794602 aactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaactaagttaagggaccaaaa 19794701  T
Q  285 cgaaa 289  Q
    |||||    
T  19794702 cgaaa 19794706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 6098620 - 6098525
Alignment:
Q  196 attcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||||    
T  6098620 attcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaact 6098525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 1070036 - 1070145
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||  |||   ||||||||||||  |    
T  1070036 cttaactctaatacattcatcctaacataaaggacaaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaaataagttaaaggacta 1070135  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  1070136 aaacgaaact 1070145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 30385385 - 30385461
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaa 258  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  30385385 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaa 30385461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 10817716 - 10817607
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| | | ||    
T  10817716 cttacctctaatacattcatcctagcataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaaggaacca 10817617  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  10817616 aaacgaaact 10817607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 17934058 - 17933950
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  17934058 cttaactctaatacattcatc-taacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaaataagttaagggacca 17933960  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  17933959 aaacgaaact 17933950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 30267594 - 30267703
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  30267594 cttaactgtaatacattcatcctaacataaaggaccaaagtggtttacggagaaagagttaagggaccaaaatgaaacaaaaaaataagttaagggacca 30267693  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  30267694 aaacgaaact 30267703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 40941685 - 40941794
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||| |||   ||   |||||||| ||| ||    
T  40941685 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacgaaggaagagttaagggaccaaaacaaaacctaaaaataagttaagggacca 40941784  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  40941785 aaacgaaact 40941794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 42592635 - 42592696
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaa 243  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  42592635 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacggaggaagagttaa 42592696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 1364315 - 1364268
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  1364315 caaaacgaaactaaaaaataagttatgggaccaaaagagtaattaagc 1364268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 40941801 - 40941892
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||||||||||| || | |||| ||||||||||||||    
T  40941801 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaaataagttaagggatcaaatgagtaattaagcct 40941892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 23090501 - 23090445
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaaga 238  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||    
T  23090501 cttaactctaatacattcatcctaacataaaagaccaaagtggttgatggaggaaga 23090445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 30385393 - 30385314
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||||||| ||||||||||| ||||||||||||| |||| |||||    
T  30385393 agagttaagggaccaaaacgaaaccaaaaaataagttaaaggaccaaaacgaaaccaaaaaataagttaaggaatcaaaa 30385314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 38771617 - 38771676
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  38771617 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 38771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 2800679 - 2800593
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaatta 324  Q
    ||||||| |||||||||||||  |||   |||||||| |||  |||||||||| ||||||||||||| || ||||||||||||||||    
T  2800679 agttaagggaccaaaacgaaactaaaaaataagttaagggacaaaaacgaaaccaaaaaataagttaagggaccaaaagagtaatta 2800593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 18270675 - 18270625
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  18270675 caaaacgaaaccaaaaaataaattaaggaaccaaaagagtaattaagccta 18270625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 28004314 - 28004264
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  28004314 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 28004264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 53204842 - 53204900
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||| ||| ||||||||||||||||||||||||| || | |||||||||||||||||||    
T  53204842 ttaagggaccaaaacgaaactaaaaaataagttaagggagcaaaagagtaattaagcct 53204900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 12061683 - 12061622
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||||||| || ||||||||||||| || ||||||||||||||||||||||    
T  12061683 agttaagggaccaaaacgacaccaaaaaataagttaagggaccaaaagagtaattaagccta 12061622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 18024775 - 18024698
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  18024775 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaacaaaaaaataagttaaggaaccaaaa 18024698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 42592610 - 42592533
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  42592610 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaacaaaaaaataagttaaggaaccaaaa 42592533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 51891299 - 51891360
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||| ||||    
T  51891299 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaaaccta 51891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 328
Target Start/End: Original strand, 2800787 - 2800879
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||| |||||||| ||||  |||   |||||||| | | ||||||||||  ||||||||||||| || ||||||||||||||||||||    
T  2800787 agagttaagggaccaaaaggaaaccaaaaaataagttaaggaaccaaaacgaaatcaaaaaataagttaagggaccaaaagagtaattaagcc 2800879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 53204581 - 53204522
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  53204581 agttaagggaccaaaacgaaac-aaaaaataagttaagggaccaaaagagtaattaagcct 53204522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 18024808 - 18024729
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  18024808 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 18024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 30267450 - 30267391
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||  ||||||||||||| || ||||||||||||||||||||    
T  30267450 agttaagggaccaaaacgaaatcaaaaaataagttaagggaccaaaagagtaattaagcc 30267391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 30267770 - 30267829
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || | ||||||||||||||||||    
T  30267770 agttaagggatcaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagcc 30267829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 42592643 - 42592564
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  42592643 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 42592564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 51891039 - 51890980
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || | ||||||||||||||||||    
T  51891039 agttaagggaccaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagcc 51890980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 53204688 - 53204766
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   ||||||||  || ||||||||||| ||||||||||||| ||||||||||    
T  53204688 agagttaag-gaccaaaacgaaatcaaaaaataagttaagtgaccaaaacgaaaccaaaaaataagttaaggaaccaaaa 53204766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 6951157 - 6951203
Alignment:
Q  282 aaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  6951157 aaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 6951203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 19794785 - 19794835
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||| ||||||||||    
T  19794785 caaaacgaaaccaaaaaataagttaagggaccaaaagagttattaagccta 19794835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 12062016 - 12062065
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| |||||||||||||  | |||||||||||||||||||||    
T  12062016 caaaacgaaaccaaaaaataagttaaaggaccaaaagagtaattaagcct 12062065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 13867674 - 13867731
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| ||| ||||| ||||| ||||||||||||| || ||||||||||||||||||||    
T  13867674 ttaagggaccaaaatgaaaccaaaaaataagttaggggaccaaaagagtaattaagcc 13867731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 17933883 - 17933822
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||    
T  17933883 agttaagggaccaaaacgaaaccaaaatataagttaagggaccaaacgagtaattaagccta 17933822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 18024916 - 18024977
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||  ||||||||||||||    
T  18024916 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaattagtaattaagccta 18024977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 22977209 - 22977286
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||   |||||||| |||||||||||| |||||||| ||||||| || |||||||    
T  22977209 agttaagggaccaaaacgaaaccaaaaaataagttaagggagcaaaacgatactaaaaattaagttaagggaccaaaa 22977286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 28033434 - 28033483
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||||||    
T  28033434 caaaacgaaacaaaaaaataagttaagagaccaaaagagtaattaagcct 28033483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 38771285 - 38771240
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||    
T  38771285 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 38771240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 10817571 - 10817511
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| |||||||||||||||||||||||||    |||||| ||||||||||||||    
T  10817571 agttaagggaccaaaacgaaactaaaaaataagttaacagaccaaatgagtaattaagcct 10817511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 25629580 - 25629504
Alignment:
Q  239 gttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| ||||||| || |||||||    
T  25629580 gttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaa 25629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 42592459 - 42592399
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||| ||||| ||||||||||||| || |||||| ||||||||||||||    
T  42592459 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatgagtaattaagcct 42592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 1070044 - 1069965
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||| ||| || |||||||    
T  1070044 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaa 1069965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 6098447 - 6098400
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    ||||||||||| ||||||||| ||| || |||||||||||||||||||    
T  6098447 caaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaagc 6098400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 6950991 - 6951070
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  6950991 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 6951070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 10817660 - 10817614
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  10817660 agttaagggaccaaaacgaaaccaaaaaataagttaaggaaccaaaa 10817614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 22977029 - 22976979
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| |||||||||||||  | ||||||| ||||||||||||||    
T  22977029 caaaacgaaaccaaaaaataagttaaaggaccaaaaaagtaattaagccta 22976979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 30385229 - 30385179
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||| ||||| ||||||||||||| || |||||| |||||||||||||||    
T  30385229 caaaatgaaaccaaaaaataagttaagggaccaaatgagtaattaagccta 30385179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 1069880 - 1069831
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||| ||| || | |||||||||||||||||||    
T  1069880 caaaacgaaaccaaaaaataatttaagggatcaaaagagtaattaagcct 1069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 18024624 - 18024567
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||| ||| ||||| ||||| ||||||||||||| || |||||| |||||||||||    
T  18024624 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatgagtaattaag 18024567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 25629490 - 25629429
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||| ||  ||||||||||||| || |||||| |||||||||||||||    
T  25629490 agttaagggaccaaaacgtaatcaaaaaataagttaagggaccaaatgagtaattaagccta 25629429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 28033091 - 28033042
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  28033091 caaaacgaaaccaaaaattaaattaagggaccaaaagagtaattaagcct 28033042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 42213199 - 42213150
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||| ||| || ||| |||||||||||||||||    
T  42213199 caaaacgaaaccaaaaaataaattaagggaccgaaagagtaattaagcct 42213150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 42213471 - 42213524
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||  |||  ||||||||||||| ||||||||||||    
T  42213471 agttaagggaccaaaacgaaaccaaaaagtaagttaaaggaccaaaacgaaact 42213524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 51891099 - 51891046
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    |||||||||||||||||||||  |||  ||||||||| ||| ||||||||||||    
T  51891099 agttaagtgaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaact 51891046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 18270976 - 18271024
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaaga 317  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||    
T  18270976 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaaga 18271024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 40941693 - 40941625
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||||||||  |||   ||| |||| ||| ||||||||||| |||||||||||||    
T  40941693 agagttaagggaccaaaacgaaaccaaaaaataatttaagggaccaaaacgaaaccaaaaaataagtta 40941625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 42213542 - 42213590
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || || |||| ||||||||||||    
T  42213542 caaaacgaaaccaaaaaataagttaagggacgaaaaaagtaattaagcc 42213590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 10286333 - 10286442
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  10286333 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 10286432  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  10286433 aaacgaaact 10286442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 32224048 - 32224157
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  32224048 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 32224147  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  32224148 aaacgaaact 32224157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 31038613 - 31038507
Alignment:
Q  185 aactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaa 284  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| |||||    
T  31038613 aactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggaccaaaa 31038514  T
Q  285 cgaaact 291  Q
    |||||||    
T  31038513 cgaaact 31038507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 1292757 - 1292866
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  1292757 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 1292856  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  1292857 aaatgaaact 1292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 8939121 - 8939012
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  8939121 cttaactctaatacattcatcctaacataaacgaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 8939022  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  8939021 aaacgaaact 8939012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 5645721 - 5645612
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||   || ||    
T  5645721 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttatgagacca 5645622  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  5645621 aaacgaaact 5645612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 19048510 - 19048401
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  19048510 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaaataagttaagggacca 19048411  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  19048410 aaacgaaact 19048401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 7829316 - 7829425
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  || || |||||||| ||||||||| |||  |||  ||||||||||||| ||    
T  7829316 cttaactctaatacattcatcctaacataaaggaccaaagtggttgagagaggatgagttaagggaccaaaacaaaaccaaaaagtaagttaaaggacca 7829415  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  7829416 aaacgaaact 7829425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 8286546 - 8286437
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  8286546 cttaactctaatacattcatcctaacataaaagaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaaataagttaatggacca 8286447  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  8286446 aaacgaaact 8286437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 29048548 - 29048439
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  29048548 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 29048449  T
Q  282 aaacgaaact 291  Q
    |||| |||||    
T  29048448 aaacaaaact 29048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 29835973 - 29836082
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  29835973 cttaactctaatacattcatccgaacataaatgaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaatggacca 29836072  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  29836073 aaacgaaact 29836082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 6888926 - 6889002
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaa 258  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  6888926 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggaagagttaagggaccaaaacgaaa 6889002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 29836212 - 29836307
Alignment:
Q  196 attcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||||    
T  29836212 attcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaattaagttaagggatcaaaacgaaact 29836307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 30860155 - 30860046
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||| |||   ||   |||||||| ||| ||    
T  30860155 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacgaaggaagagttaagggaccaaaacaaaacctaaaaataagttaagggacca 30860056  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  30860055 aaacgaaact 30860046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 18700491 - 18700401
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||| ||||||||| |||  |||  ||||||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  18700491 agttaagggaccaaaacaaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 18700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 8938945 - 8938884
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  8938945 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 8938884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 19048654 - 19048715
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  19048654 agttaagggaccaaaacgaaactaaaaaataaattaagggaccaaaagagtaattaagccta 19048715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 29048370 - 29048313
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||||| ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  29048370 ttaaaggaccaaaacgaaactaaaaaataagttaagggaccaaatgagtaattaagcc 29048313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 10286569 - 10286628
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  10286569 agttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 10286628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 15833542 - 15833495
Alignment:
Q  281 aaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  15833542 aaaacgaaacaaaaaaataagttaaggaaccaaaagagtaattaagcc 15833495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 5645603 - 5645546
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  5645603 ttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 5645546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 5645876 - 5645925
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  5645876 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 5645925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 6888842 - 6888781
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||||    
T  6888842 agttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaagccta 6888781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 8286370 - 8286309
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| |  ||||||||||||||||||||||    
T  8286370 agttaagggaccaaaacgaaaccaaaaaataagttaagagaccaaaagagtaattaagccta 8286309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 30860240 - 30860317
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  30860240 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaacaaaaaaataagttaaggaaccaaaa 30860317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 1292601 - 1292553
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  1292601 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 1292553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 30859979 - 30859919
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  30859979 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagcct 30859919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 31038369 - 31038321
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  31038369 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 31038321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 6889101 - 6889160
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||  ||||||||||||| || ||||||||||||||||||||    
T  6889101 agttaagggaccaaaacgaaatcaaaaaataagttaagggaccaaaagagtaattaagcc 6889160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 8939113 - 8939192
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||| |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  8939113 agagttaagggaccaaaatgaaatcaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 8939192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 26841605 - 26841664
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || || |||||||||||||||||    
T  26841605 agttaagggaccaaaacgaaaccaaaaaataagttaagggacaaaaagagtaattaagcc 26841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 29048540 - 29048618
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  29048540 agagttaag-gaccaaaacgaaatcaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 29048618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 10286208 - 10286162
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  10286208 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaag 10286162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 8286689 - 8286750
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| ||  |||||| ||||||||||||||    
T  8286689 agttaagggaccaaaacgaaaccaaaaaataagttaagggcccaaaaaagtaattaagccta 8286750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 19048394 - 19048317
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||| ||||||| || |||||||    
T  19048394 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaa 19048317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 32223892 - 32223847
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||    
T  32223892 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 32223847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 9899769 - 9899693
Alignment:
Q  239 gttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||| |||||||||||||  |||   |||||||| ||| |||||||||| |||||||||||||| ||||| ||||    
T  9899769 gttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttaaggaactaaaa 9899693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 12153577 - 12153621
Alignment:
Q  281 aaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    |||||||||| ||||||||||||| || |||||||||||||||||    
T  12153577 aaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 12153621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 18693635 - 18693691
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||| |||||||||    
T  18693635 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaaaagtaattaa 18693691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 19048303 - 19048243
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||| ||||| ||||||||||||| || ||||||| |||||||||||||    
T  19048303 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaaaagtaattaagcct 19048243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 29048692 - 29048752
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| |||||| |||| ||||||||||||| || ||||||||| |||||||||||    
T  29048692 agttaagggaccaaaactaaaccaaaaaataagttaagggaccaaaagaataattaagcct 29048752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 30860147 - 30860215
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  30860147 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 30860215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 7829503 - 7829554
Alignment:
Q  280 caaaacgaaactaaaa-aataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| |||| ||||||||| || ||||||||||||||||||||||    
T  7829503 caaaacgaaaccaaaaaaataagttaagggaccaaaagagtaattaagccta 7829554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 8286538 - 8286616
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||||||||| |||   |||||||| ||| ||||| ||||| ||||||||||||| || |||||||    
T  8286538 agagttaag-gaccaaaacgaaatcaaaaaataagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaa 8286616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 9899619 - 9899560
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||| ||||| ||||||||||||| || |||||| |||||||||||||    
T  9899619 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatgagtaattaagcc 9899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 29836375 - 29836434
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||| ||||| ||||| ||||||||||||| || ||||||| ||||||||||||||    
T  29836375 ttaagggatcaaaatgaaaccaaaaaataagttaggggaccaaaatagtaattaagccta 29836434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 7873690 - 7873641
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  7873690 caaaacgaaaccaaaaaataagttaagggacc-aaagagtaattaagccta 7873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 32224235 - 32224285
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||| ||||||| || ||||||||||||||||| ||||    
T  32224235 caaaacgaaaccaaaaattaagttaagggaccaaaagagtaattaacccta 32224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 1292884 - 1292933
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| |||||||||||||    |||||||||||||||||||||    
T  1292884 caaaacgaaaccaaaaaataagttaaaagaccaaaagagtaattaagcct 1292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 7873846 - 7873879
Alignment:
Q  182 cttaactctaatatattcatcctaacataaagga 215  Q
    ||||||||||||| ||||||||||||||||||||    
T  7873846 cttaactctaatacattcatcctaacataaagga 7873879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 10286509 - 10286562
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||| |||  ||||||||| ||| ||||||||||||    
T  10286509 agttaagggaccaaaacgaaatcaaaaagtaagttaagggaccaaaacgaaact 10286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 31038772 - 31038821
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||| ||||||| || || ||||||||||||||||||    
T  31038772 caaaacgaaaccaaaaattaagttaagggactaaaagagtaattaagcct 31038821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 32224164 - 32224217
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||| |||  ||||||||| ||| ||||||||||||    
T  32224164 agttaagggaccaaaacgaaatcaaaaagtaagttaagggatcaaaacgaaact 32224217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 18700575 - 18700607
Alignment:
Q  182 cttaactctaatatattcatcctaacataaagg 214  Q
    ||||||||||||| |||||||||||||||||||    
T  18700575 cttaactctaatacattcatcctaacataaagg 18700607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 6172164 - 6172273
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  6172164 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 6172263  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  6172264 aaacgaaact 6172273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 315
Target Start/End: Complemental strand, 13476867 - 13476734
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  13476867 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaatggatca 13476768  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| ||||| ||||||| || |||||||    
T  13476767 aaacgaaaccaaaaagtaagttaagggaccaaaa 13476734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 20841737 - 20841846
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  20841737 cttaactctaatacattaatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 20841836  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  20841837 aaacgaaact 20841846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 42381996 - 42382105
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  42381996 cttaactctaatacattcatcctaacataaaggaccaaagtagttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 42382095  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  42382096 aaacgaaact 42382105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 8127677 - 8127785
Alignment:
Q  183 ttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaa 282  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||| ||| |||    
T  8127677 ttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaagggatcaa 8127776  T
Q  283 aacgaaact 291  Q
    |||||||||    
T  8127777 aacgaaact 8127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 14858398 - 14858506
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||  ||||||||||||| ||    
T  14858398 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaagtaagttaaaggacca 14858497  T
Q  282 aaacgaaac 290  Q
    |||||||||    
T  14858498 aaacgaaac 14858506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 1156199 - 1156090
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  1156199 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 1156100  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  1156099 aaacgaaact 1156090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 6132099 - 6131990
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||  ||||||||||||| ||    
T  6132099 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaagtaagttaaaggacca 6132000  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  6131999 aaaagaaact 6131990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 17094438 - 17094329
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||  |||  |||||||||| || ||    
T  17094438 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacgaaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaagacca 17094339  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  17094338 aaacgaaact 17094329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 7278091 - 7277985
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  7278091 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaacggacca 7277992  T
Q  282 aaacgaa 288  Q
    |||||||    
T  7277991 aaacgaa 7277985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 29906164 - 29906274
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaa-tgaaattgtaagttaaaggagc 280  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||  |||||||||||||      
T  29906164 cttaactataatacattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagggaccaaaacgaaaccaaaaaagtaagttaaaggacg 29906263  T
Q  281 aaaacgaaact 291  Q
    |||||||||||    
T  29906264 aaaacgaaact 29906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 9438472 - 9438363
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||  |||  |||| |||||||| ||    
T  9438472 cttaactctaatacattcatcctaacataaaggatcaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaatttaaaggacca 9438373  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  9438372 aaatgaaact 9438363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 24100121 - 24100012
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||||||| ||    
T  24100121 cttaactctaatacattcatcctaacataatggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaacaaaaaaataagttaaaggacca 24100022  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  24100021 aaatgaaact 24100012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 37812466 - 37812357
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  37812466 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 37812367  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  37812366 aaaggaaact 37812357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 42026487 - 42026596
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||  |||  |||||||||||||  |    
T  42026487 cttaactctaatacattcatcctaacatagaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacga 42026586  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  42026587 aaatgaaact 42026596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 43476292 - 43476183
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  43476292 cttaactctattgcattcatcctaacataaaggaccaaagtggttgaccgaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 43476193  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  43476192 aaacgaaact 43476183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 10503866 - 10503757
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||  | ||||||||||  |||  |||||||||| || ||    
T  10503866 cttaactctaatacattcatcctaacataaaggactaaagtggttgacggaggaagagttaaggaatcaaaacgaaaccaaaaagtaagttaaatgacca 10503767  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  10503766 aaacgaaact 10503757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 10570238 - 10570129
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||  |||   ||||||||  || ||    
T  10570238 cttaactctaatacattcatcctaacataaaagaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagtgacca 10570139  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  10570138 aaacgaaact 10570129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 4349697 - 4349805
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagtt-aagtgaccaaaacgaaatgaaattgtaagttaaaggagc 280  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| ||||  |||  ||||||||| ||| |    
T  4349697 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaaagggaccaaaatgaaaccaaaaagtaagttaagggacc 4349796  T
Q  281 aaaacgaaa 289  Q
    |||||||||    
T  4349797 aaaacgaaa 4349805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 42381406 - 42381512
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||||| || |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  42381406 cttaactctaatacattcatcctaacataaaggatcaaagaggttgacggaggatgagttaagggaccaaaacgaaaccaaaaagtaagttaacggacca 42381505  T
Q  282 aaacgaa 288  Q
    |||||||    
T  42381506 aaacgaa 42381512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 22803413 - 22803522
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||| | ||||||||||| |||||||| ||||  |||  ||||||||||||| ||    
T  22803413 cttaactctaatacattcatcctaacataaaggaccaaagaggctgacgaaggaagagttaagggaccaaaatgaaaccaaaaagtaagttaaaggacca 22803512  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  22803513 aaaagaaact 22803522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 36442395 - 36442286
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||| || || |||||||| ||||||||| |||  |||  ||||||||||||| ||    
T  36442395 cttaactctaatacattcatcctaatataaaagaccaaagtggttgacagaggatgagttaagggaccaaaacaaaaccaaaaagtaagttaaaggacca 36442296  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  36442295 aaatgaaact 36442286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 9040859 - 9040918
Alignment:
Q  200 atcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaat 259  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  9040859 atcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaat 9040918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 1156343 - 1156402
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  1156343 agttaagggatcaaaacgaaaccaaaaaataagttatgggaccaaaagagtaattaagcc 1156402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 10570122 - 10570031
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||||||||||| || | ||||||| |||||||||||    
T  10570122 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaaataagttaagggatcaaaagaataattaagcct 10570031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 6132256 - 6132305
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6132256 caaaacgaaaccaaaaaataagttaaggaaccaaaagagtaattaagcct 6132305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 22803589 - 22803650
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  22803589 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 22803650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 31369924 - 31369985
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  31369924 taagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 31369985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 37812290 - 37812229
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  37812290 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 37812229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 42026663 - 42026724
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  42026663 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 42026724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 42381261 - 42381204
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  42381261 agttaagggaccaaaacgaaaccaaaaaataagttaaggaaccaaaagagtaattaag 42381204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 1156023 - 1155963
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  1156023 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 1155963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 4349874 - 4349933
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  4349874 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 4349933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 6172340 - 6172399
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  6172340 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 6172399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 9040802 - 9040743
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9040802 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 9040743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 9438296 - 9438237
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9438296 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 9438237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 43476284 - 43476363
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||||||| ||||||||||||||||||||||||| || |||||||    
T  43476284 agagttaagggaccaaaatgaaaccaaaaaataagttaaaggaccaaaacgaaactaaaaaataagttaagggaccaaaa 43476363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 16792019 - 16791969
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  16792019 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 16791969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 21289540 - 21289590
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  21289540 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 21289590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 22803256 - 22803206
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  22803256 caaaacgaaatcaaaaaataagttaaggaaccaaaagagtaattaagccta 22803206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 29906039 - 29905989
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  29906039 caaaacgaaaccaaaaaataagttaagaaaccaaaagagtaattaagccta 29905989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 42026331 - 42026281
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  42026331 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 42026281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 43476448 - 43476498
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  43476448 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 43476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 8127529 - 8127472
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  8127529 ttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 8127472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 42381582 - 42381635
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaat 322  Q
    |||||| ||| ||||||||||||||||||||||||| || ||||||||||||||    
T  42381582 agttaagggaccaaaacgaaactaaaaaataagttaagggaccaaaagagtaat 42381635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 4349543 - 4349495
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  4349543 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 4349495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 8127792 - 8127851
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  8127792 agttaagggaccaaaacgaaac-aaaaaataagttaagggaccaaaagagtaattaagcct 8127851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 14858344 - 14858296
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  14858344 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 14858296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 42381840 - 42381792
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  42381840 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 42381792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 6131923 - 6131864
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  6131923 agttaagggaccaaaacgaaaccaaaaaacaagttaagggaccaaaagagtaattaagcc 6131864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 7277855 - 7277797
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| |||||||||||||||||||||| || || ||||||||||||||||||||    
T  7277855 agttaagggaccaaaacgaaactaaaaaataag-taagggaccaaaagagtaattaagcc 7277797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 14858576 - 14858635
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||| ||||||||||  ||||||||||||| || ||||||||||||||||||||||    
T  14858576 ttaagggaccaaaacgaaatcaaaaaataagttaagggaccaaaagagtaattaagccta 14858635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 42382172 - 42382231
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||    
T  42382172 agttaagggaccaaatcgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 42382231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 10504022 - 10504068
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||    
T  10504022 caaaacgaaattaaaaaataagttaagggaccaaaagagtaattaag 10504068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 36442551 - 36442600
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || | |||||||||||||||||||    
T  36442551 caaaacgaaacaaaaaaataagttaagggatcaaaagagtaattaagcct 36442600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 37812550 - 37812607
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||| ||||||||||    
T  37812550 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaaaagtaattaag 37812607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 7278083 - 7278151
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||||||||||||||||||    
T  7278083 agagttaagggaccaaaatgaaacaaaaaaataagttaagggaccaaaacgaaactaaaaaataagtta 7278151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 9040955 - 9041010
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||    
T  9040955 agttaagggaccaaaacgaaaccaaaaaataagttaagg-accaaaagagtaattaa 9041010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 9438627 - 9438675
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| || |||||||||| || ||||||||||||||||||||    
T  9438627 caaaacgaaaccaataaataagttaagggaccaaaagagtaattaagcc 9438675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 17094262 - 17094206
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    |||||| ||| ||||||||||| ||||||||||||| |  |||||||||||||||||    
T  17094262 agttaagggaccaaaacgaaaccaaaaaataagttaagagaccaaaagagtaattaa 17094206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 24100278 - 24100326
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| |||||| ||||||||||||| || ||||||||||||||||||||    
T  24100278 caaaccgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 24100326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 29906292 - 29906340
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||| | || ||||||||||||||||||||    
T  29906292 caaaacgaaaccaaaaaataagtcaagggaccaaaagagtaattaagcc 29906340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 13476720 - 13476661
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| |||||||||| |||||||||||||| || | |||||||||||| |||||    
T  13476720 agttaagggaccaaaacgaaattaaaaaataagttaggggatcaaaagagtaatgaagcc 13476661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 42026495 - 42026416
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  42026495 agagttaagagaccaaaatgaaaccaaaaaataagttaatggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 42026416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 42382004 - 42381925
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  42382004 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 42381925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 6172009 - 6171959
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| |  ||||||||| ||||||||||||    
T  6172009 caaaacgaaaccaaaaaataagttaagagaccaaaagaataattaagccta 6171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 10570382 - 10570436
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaatt 323  Q
    |||||| ||| ||||| ||||| ||||||||||||| || |||||||||||||||    
T  10570382 agttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaagagtaatt 10570436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 11987543 - 11987588
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || | |||||||||||||||    
T  11987543 caaaacgaaacaaaaaaataagttaggggaacaaaagagtaattaa 11987588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 17094594 - 17094639
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || ||||||| |||||||||    
T  17094594 caaaacgaaaccaaaaaataagttaagggaccaaaaaagtaattaa 17094639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 36442208 - 36442163
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || ||||||||| |||||||    
T  36442208 caaaacgaaaccaaaaaataagttaagggaccaaaagaataattaa 36442163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 6132123 - 6132171
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  6132123 taagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 6132171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 9438494 - 9438542
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  9438494 taagttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaa 9438542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 13476889 - 13476937
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||| ||||| ||||||||||| ||||||||||||| || |||||||    
T  13476889 taagttcaaggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 13476937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 22803389 - 22803341
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  22803389 taagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 22803341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 36611217 - 36611108
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  36611217 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 36611118  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  36611117 aaacgaaact 36611108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 25764597 - 25764488
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  25764597 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaactaaaaagtaagttaaaggacca 25764498  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  25764497 aaaagaaact 25764488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 51949566 - 51949457
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  51949566 cttaactctaatacattcatcataacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 51949467  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  51949466 aaacgaaact 51949457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 315
Target Start/End: Original strand, 55013886 - 55014019
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || || |||||||| ||||||||| |||  |||  ||||||||||||| ||    
T  55013886 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggatgagttaagggaccaaaacaaaaccaaaaagtaagttaaaggatca 55013985  T
Q  282 aaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| ||||| ||||||| || |||||||    
T  55013986 aaacgaaaccaaaaagtaagttaagggaccaaaa 55014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 26107825 - 26107716
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||  |||  ||||||||||||| ||    
T  26107825 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaaggtaccaaaacgaaaccaaaaagtaagttaaaggacca 26107726  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  26107725 aaaagaaact 26107716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 19630998 - 19630889
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||  |||  |||| |||||||| ||    
T  19630998 cttaactctaatacattcatcctaacataaaggatcaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaatttaaaggacca 19630899  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  19630898 aaatgaaact 19630889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 23330045 - 23329936
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || || |||||||| ||||||||| |||  |||  ||||||||||||| ||    
T  23330045 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggatgagttaagggaccaaaacaaaaccaaaaagtaagttaaaggacca 23329946  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  23329945 aaacgaaact 23329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 31208318 - 31208426
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  31208318 cttaactctaatacattcatgctaacaaaaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaa-agtaagttaaaggacca 31208416  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  31208417 aaacgaaact 31208426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 39899317 - 39899426
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||  | ||||||||||| ||    
T  39899317 cttaactctaatacattcatcatagcataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagcaagttaaaggacca 39899416  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  39899417 aaacgaaact 39899426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 32155744 - 32155637
Alignment:
Q  183 ttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaa 282  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||   ||| |||| ||| |||    
T  32155744 ttaactctaatacattcatcctaacataaaggaccaaagtggttgac-gaggaagagttaagggaccaaaacgaaaccaaaaaataaattaagggatcaa 32155646  T
Q  283 aacgaaact 291  Q
    |||||||||    
T  32155645 aacgaaact 32155637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 52766357 - 52766465
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||| |||  |||  ||||||||||||| ||    
T  52766357 cttaactctaatacattcatcctaacataaaggaccaaagtag-tgacggaggaagagttaatggaccaaaacaaaaccaaaaagtaagttaaaggacca 52766455  T
Q  282 aaacgaaact 291  Q
    |||| |||||    
T  52766456 aaacaaaact 52766465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 32617420 - 32617492
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaac 254  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  32617420 cttaactctaatacattcatcctagcataaaggaccaaagtggttgacgaaggaagagttaagggaccaaaac 32617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 11822829 - 11822758
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaa 253  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || || |||||||| ||||||||    
T  11822829 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggatgagttaagggaccaaaa 11822758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 9100295 - 9100371
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaa 258  Q
    ||||| ||||||| |||||||| ||||| ||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  9100295 cttaaatctaatacattcatcccaacattaaggacctaagtggttgacggaggaagagttaagggaccaaaacgaaa 9100371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 27509723 - 27509632
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||| |||||||||||||  |||  ||||||||| ||| ||||||||||| ||||||||||||| || |||||| ||||||||||||||    
T  27509723 agttaagggaccaaaacgaaaccaaaaagtaagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagcct 27509632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 9203473 - 9203400
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  9203473 cttaactcaaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 9203400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 9207692 - 9207619
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  9207692 cttaactcaaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 9207619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 27509839 - 27509730
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||| || |||||||||||||| | ||||||||||| ||||||||| |||   ||   |||||||| ||| ||    
T  27509839 cttaactctaatacattcatcctagcataaaagatcaaagtggttgacgaaggaagagttaagggaccaaaacaaaacctaaaaataagttaagggatca 27509740  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  27509739 aaacgaaact 27509730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 25764743 - 25764804
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  25764743 agttaaagaaacaaaacgaaaccaaaaaataagttaaggaaccaaaagagtaattaaaccta 25764804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 19630822 - 19630762
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  19630822 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 19630762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 25764421 - 25764361
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  25764421 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 25764361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 31208493 - 31208553
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  31208493 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 31208553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 51949334 - 51949274
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  51949334 agttaagggaccaaaacgaaactaaaaaataaattaagggaccaaaagagtaattaagcct 51949274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 39899161 - 39899111
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  39899161 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 39899111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 52766201 - 52766151
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  52766201 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 52766151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 9203558 - 9203619
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  9203558 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 9203619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 9207777 - 9207838
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  9207777 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 9207838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 26107981 - 26108030
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  26107981 caaaacgaaaccaaaaaataagttaaggaaccaaaaaagtaattaagcct 26108030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 32617596 - 32617657
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| |||||||||||||||    
T  32617596 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagccta 32617657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 52766532 - 52766593
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||||||| ||  |||||||||||| |||||||||||||||||||||||||    
T  52766532 agttaagggaccaaaacgacacccaaaaataagttaaggaaccaaaagagtaattaagccta 52766593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 9100451 - 9100499
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9100451 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 9100499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 36611101 - 36611041
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || || ||||||||||||||||||    
T  36611101 agttaagggaccaaaacgaaaccaaaaaataagttaagggactaaaagagtaattaagcct 36611041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 51949691 - 51949739
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  51949691 caaaacgaaaccaaaaaataaattacggaaccaaaagagtaattaagcc 51949739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 39899325 - 39899246
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  ||| | |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  39899325 agagttaagagaccaaaatgaaaccaaaatataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 39899246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 19631153 - 19631203
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| || |||||||||| || ||||||||||||||||||||||    
T  19631153 caaaacgaaaccaataaataagttaagggaccaaaagagtaattaagccta 19631203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 11822985 - 11823034
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || | |||||||||||||||||||    
T  11822985 caaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagcct 11823034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 23329858 - 23329813
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||    
T  23329858 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 23329813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 27509831 - 27509899
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  27509831 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 27509899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 32617428 - 32617360
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||||||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  32617428 agagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 32617360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 36611374 - 36611422
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||  ||||||||||||| || ||||||||||||||||||||    
T  36611374 caaaacgaaaacaaaaaataagttaagggaccaaaagagtaattaagcc 36611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 11822713 - 11822664
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  11822713 caaaacgaaaccaaaaa-taagttaagggaccaaaagagtaattaagccta 11822664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 330
Target Start/End: Original strand, 39899505 - 39899543
Alignment:
Q  292 aaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  39899505 aaaaaataagttaagggaccaaaagagtaattaagccta 39899543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 55014044 - 55014094
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| |||||||||||||  | || |||||||||||||||||||    
T  55014044 caaaacgaaaccaaaaaataagttaatggactaaaagagtaattaagccta 55014094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 11822854 - 11822907
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||  |||  ||||||||||||| ||||||||||||    
T  11822854 agttaagggaccaaaacgaaaccaaaaagtaagttaaaggaccaaaacgaaact 11822907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 39899433 - 39899486
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||| |||  ||||||||| ||| ||||||||||||    
T  39899433 agttaagggaccaaaacgaaatcaaaaagtaagttaagggaccaaaacgaaact 39899486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 51949620 - 51949673
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||  |||  ||||||||||||| ||||||||||||    
T  51949620 agttaagggaccaaaacgaaaccaaaaagtaagttaaaggaccaaaacgaaact 51949673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 55013861 - 55013808
Alignment:
Q  238 agttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaact 291  Q
    ||||||| |||||||||||||  |||  ||||||||||||| ||||||||||||    
T  55013861 agttaagggaccaaaacgaaaccaaaaagtaagttaaaggaccaaaacgaaact 55013808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 93654 - 93606
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||| ||||||| || ||||||| ||||||||||||    
T  93654 caaaacgaaaccaaaaattaagttaagggaccaaaaaagtaattaagcc 93606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 9203496 - 9203536
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    |||||||| ||| |||||||||| |||||||||||||||||    
T  9203496 taagttaagggaccaaaacgaaattaaaaaataagttatgg 9203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 9207715 - 9207755
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    |||||||| ||| |||||||||| |||||||||||||||||    
T  9207715 taagttaagggaccaaaacgaaattaaaaaataagttatgg 9207755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 19631020 - 19631068
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  19631020 taagttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaa 19631068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 52766365 - 52766297
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagtta 304  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| |||||||||||||    
T  52766365 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagtta 52766297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 5073 - 4964
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||  ||||||||||||| ||    
T  5073 cttaactctgatacattcatcctaacataaaggaccaaagtgattgacggaggaagagttaagggaccaaaacgaaatcaaaaagtaagttaaaggacca 4974  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  4973 aaacgaaact 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 4928 - 4873
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaatta 324  Q
    ||||||| || ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  4928 agttaaaagaccaaaaagaaaccaaaaaataagttaagggaccaaaagagtaatta 4873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 5198 - 5244
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    ||||||||||| ||||||||||||| || ||||||| ||||||||||    
T  5198 caaaacgaaaccaaaaaataagttaagggaccaaaaaagtaattaag 5244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 10579498 - 10579607
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  10579498 cttaactctaatacattcatcctaacataaaggaccaaagtagttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 10579597  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  10579598 aaacgaaact 10579607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 17738489 - 17738380
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||  |||  |||| |||||||| ||    
T  17738489 cttaactctaatacattcatcctaacataaaggatcaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaatttaaaggacca 17738390  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  17738389 aaacgaaact 17738380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 48225255 - 48225146
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  48225255 cttaactctaatacattcatcctaacataaacgactaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 48225156  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  48225155 aaacgaaact 48225146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 52051465 - 52051356
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||  |||  ||||||||||||| ||    
T  52051465 cttaactctaatacattcatcctaacataaaggaccaaagcggttgaaggaggaagagttaagggaccaaaacgaaaccaaaaggtaagttaaaggacca 52051366  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  52051365 aaacgaaact 52051356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 11653111 - 11653002
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| |||  |||  ||||||||||||| ||    
T  11653111 cttaactctaatacattcatcctatcataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacaaaaccaaaaagtaagttaaaggacca 11653012  T
Q  282 aaacgaaact 291  Q
    || |||||||    
T  11653011 aagcgaaact 11653002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 13834946 - 13834837
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  13834946 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaaataagttaagggacca 13834847  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  13834846 aaaggaaact 13834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 17750361 - 17750470
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||  |||  |||| |||||||| ||    
T  17750361 cttaactctaatacattcatcctaacataaaggatcaaagtggttgacggaggaagagttaagggaccaaaacgaaaccaaaaagtaatttaaaggacca 17750460  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  17750461 aaatgaaact 17750470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 14499460 - 14499569
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  |||  |||  |||||||||| || ||    
T  14499460 cttaactctaatacattcatcctaacataaagaaccaaagtggttgacggaggaagagttaagggaccaaaataaaaccaaaaagtaagttaaaagacca 14499559  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  14499560 aaacgaaact 14499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 7204131 - 7204239
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||   |||||||| ||| ||    
T  7204131 cttaactctaatacagtcatc-taacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaaataagttaagggacca 7204229  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  7204230 aaacgaaact 7204239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 13162949 - 13162999
Alignment:
Q  18 tttagtgcatgaagaaaaataaccacttgacattgctaggcgcatgacatt 68  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  13162949 tttagtgcgtgaagaaaaataaccacttgacattgttaggcgcatgacatt 13162999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 11652935 - 11652876
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  11652935 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 11652876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 326
Target Start/End: Complemental strand, 13834768 - 13834713
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  13834768 ttaagggaccaaaacgaaacaaaaaaataagttaaggaaccaaaagagtaattaag 13834713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 10579342 - 10579293
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  10579342 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 10579293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 17738676 - 17738725
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  17738676 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 17738725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 17750537 - 17750598
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||| ||||||||||||    
T  17750537 agttaagggaccaaaacgaaacaaaaaaataagttaagggaccaaaagaataattaagccta 17750598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 48225404 - 48225453
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  48225404 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 48225453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 14499587 - 14499635
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  14499587 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 14499635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 52051289 - 52051233
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    |||||||||||||||| ||||  ||||||||||||| || |||||||||||||||||    
T  52051289 agttaaaggagcaaaatgaaatcaaaaaataagttaagggaccaaaagagtaattaa 52051233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 52051644 - 52051704
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||||| | ||||||||||||||||||||||||| || | ||||||| |||||||||||    
T  52051644 agttaaagaaccaaaacgaaactaaaaaataagttaagggatcaaaagaataattaagcct 52051704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 7204017 - 7203958
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||| |||||||||||||    
T  7204017 agttaatggaccaaaacgaaaccaaaaaataagttaagggaccaaacgagtaattaagcc 7203958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 10579674 - 10579733
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||    
T  10579674 agttaagggaccaaatcgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 10579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 11653103 - 11653182
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||||||| ||||||||||| ||||||||||||| | ||||||||    
T  11653103 agagttaagggaccaaaatgaaaccaaaaaataagttaaaggaccaaaacgaaaccaaaaaataagttaagaaaccaaaa 11653182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 17750174 - 17750127
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagc 327  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||    
T  17750174 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagc 17750127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 14499304 - 14499259
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||    
T  14499304 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 14499259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 17738311 - 17738254
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| ||| ||||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  17738311 ttaagggaccaaaacgaaacaaaaaaataagttaagggaccaaaagaataattaagcc 17738254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 28999440 - 28999485
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaa 325  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||    
T  28999440 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaa 28999485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 7204306 - 7204366
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| |||||||||||||  | |||||| ||||||||||||||    
T  7204306 agttaagggaccaaaacgaaaccaaaaaataagttaatggaccaaatgagtaattaagcct 7204366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 17738515 - 17738591
Alignment:
Q  239 gttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    |||||| |||||||||||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  17738515 gttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 17738591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 10579506 - 10579427
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  10579506 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 10579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 17750369 - 17750290
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||| |||   |||||||| ||| ||||||||||| |||||||| |||| || |||||||    
T  17750369 agagttaagggaccaaaatgaaatcaaaaaataagttaagggatcaaaacgaaaccaaaaaataggttaagggaccaaaa 17750290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 11653267 - 11653307
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagta 320  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  11653267 caaaacgaaactaaaaaataagttaaaggaccaaaagagta 11653307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 13205882 - 13205926
Alignment:
Q  18 tttagtgcatgaagaaaaataaccacttgacattgctaggcgcat 62  Q
    |||||||| ||||||||| |||||||||||||||  |||||||||    
T  13205882 tttagtgcgtgaagaaaagtaaccacttgacattcttaggcgcat 13205926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 28991072 - 28991024
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||  ||||||||||||| |  ||||||||||||||||||||    
T  28991072 caaaacgaaatcaaaaaataagttaagagaccaaaagagtaattaagcc 28991024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 48225079 - 48225019
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| |||||| |||| ||||||||||||| || | ||||| |||||||||||||    
T  48225079 agttaagggaccaaaaccaaaccaaaaaataagttaagggatcaaaaaagtaattaagcct 48225019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 27904 - 27795
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||  |||  ||||||||||||| ||    
T  27904 cttaactctaatacattcatcctaacataaaggaccaaagtagttgacggaggaaaagttaagggaccaaaacgaaaccaaaaagtaagttaaaggacca 27805  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  27804 aaacgaaact 27795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 27717 - 27669
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    |||| |||||| ||||||||||||| || ||||||||||||||||||||    
T  27717 caaatcgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 27669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 27896 - 27975
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||| ||||||||||||| || |||||||    
T  27896 agagttaagggaccaaaaggaaaccaaaaaataagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaa 27975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 144922 - 145031
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  |||  |||||||||| || ||    
T  144922 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagggaccaaaatgaaaccaaaaagtaagttaaatgacca 145021  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  145022 aaacgaaact 145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 144766 - 144717
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  144766 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 144717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 144930 - 144851
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaa 315  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| ||||||||||||||||||||||||| || |||||||    
T  144930 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaactaaaaaataagttaagggaccaaaa 144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 99803 - 99912
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || || |||||||| ||||||||| |||  |||  ||||||||||||| ||    
T  99803 cttaactctaatacattcatcctaacataaaggaccaaagtggttgacagaggatgagttaagggaccaaaacaaaaccaaaaagtaagttaaaggacca 99902  T
Q  282 aaacgaaact 291  Q
    ||||||||||    
T  99903 aaacgaaact 99912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 99990 - 100040
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  99990 caaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 100040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 99647 - 99597
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||||||||||| || | ||||||||||||||||||||    
T  99647 caaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagccta 99597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 8069 - 7963
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||  |||  ||||||||| ||| ||    
T  8069 cttaactctaatacattcatcctaacataaaggatcaaagtggttgacgaatgatgagttaagggaccaaaacgaaaccaaaaagtaagttaacggacca 7970  T
Q  282 aaacgaa 288  Q
    |||||||    
T  7969 aaacgaa 7963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 8215 - 8275
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||| ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  8215 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 7868 - 7900
Alignment:
Q  72 ttaattactcttttggtctcttaactattaaaa 104  Q
    |||||||||||||||||| ||||||||||||||    
T  7868 ttaattactcttttggtcccttaactattaaaa 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 6907 - 6798
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  |||   |||||||| ||| ||    
T  6907 cttaactccaatacattcatcctaacataaaggaccaaagtggttgacggaggaagagttaagagaccaaaacgaaaccaaaaaataagttaagggatca 6808  T
Q  282 aaacgaaact 291  Q
    |||| |||||    
T  6807 aaacaaaact 6798  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 6719 - 6670
Alignment:
Q  281 aaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||||| ||||||||||||| || ||||||||||||||||||||||    
T  6719 aaaatgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 6670  T

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Target: scaffold0352 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 11309 - 11201
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagca 281  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||  |||||||| |||| ||    
T  11309 cttaactctaatacattcatcctgacataaaggaccaaagtggttgac-gaggaagagttaagggaccaaaacgaaaccaaaaagtaagttacaggatca 11211  T
Q  282 aaacgaaact 291  Q
    ||| ||||||    
T  11210 aaatgaaact 11201  T

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Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 11194 - 11134
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcct 329  Q
    |||||||||| ||||||||||| ||||||||| ||| || ||||||| |||||||||||||    
T  11194 agttaaaggatcaaaacgaaaccaaaaaataaattaagggaccaaaatagtaattaagcct 11134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 11434 - 11484
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    ||||||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  11434 caaaacgaaaccaaaaattaagttaagggaccaaaagagtaattaagccta 11484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 50; Significance: 2e-19; HSPs: 21)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 5771 - 5698
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  5771 cttaactctaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 9986 - 9913
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  9986 cttaactctaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 9913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 14201 - 14128
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  14201 cttaactctaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 14128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 18416 - 18343
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  18416 cttaactctaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 18343  T

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Target: scaffold0135; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 22631 - 22558
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  22631 cttaactctaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 22558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 26846 - 26773
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  26846 cttaactctaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 26773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 1556 - 1483
Alignment:
Q  182 cttaactctaatatattcatcctaacataaaggaccaaagtggttgacggatgaagagttaagtgaccaaaacg 255  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  1556 cttaactcaaatacattcatcctaaaataaaggaccaaagtggttgacgtaggaagagttaaggtaccaaaacg 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 5856 - 5917
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  5856 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 10071 - 10132
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  10071 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 10132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 14286 - 14347
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  14286 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 14347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 18501 - 18562
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  18501 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 18562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 22716 - 22777
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  22716 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 22777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 26931 - 26992
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||||| ||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  26931 agttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 26992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 1652 - 1702
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  1652 caaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagccta 1702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 5763 - 5834
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||| |||||||||||||||||    
T  5763 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttatgg 5834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 9978 - 10049
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||| |||||||||||||||||    
T  9978 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttatgg 10049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 14193 - 14264
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||| |||||||||||||||||    
T  14193 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttatgg 14264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 18408 - 18479
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||| |||||||||||||||||    
T  18408 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttatgg 18479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 22623 - 22694
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||| |||||||||||||||||    
T  22623 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttatgg 22694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 26838 - 26909
Alignment:
Q  236 agagttaagtgaccaaaacgaaatgaaattgtaagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    ||||||||| |||||||| ||||  |||   |||||||| ||| |||||||||| |||||||||||||||||    
T  26838 agagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaaacgaaattaaaaaataagttatgg 26909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 1579 - 1619
Alignment:
Q  267 taagttaaaggagcaaaacgaaactaaaaaataagttatgg 307  Q
    |||||||| ||| |||||||||| |||||||||||||||||    
T  1579 taagttaagggaccaaaacgaaattaaaaaataagttatgg 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 172910 - 172967
Alignment:
Q  269 agttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaag 326  Q
    |||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  172910 agttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaag 172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 11830 - 11782
Alignment:
Q  280 caaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagcc 328  Q
    ||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  11830 caaaacgaaaccaaaaaataagttaagggaccaaaagtgtaattaagcc 11782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 26193 - 26252
Alignment:
Q  271 ttaaaggagcaaaacgaaactaaaaaataagttatggaaccaaaagagtaattaagccta 330  Q
    |||| ||| ||||| ||||| ||||||||||||| || ||||||| ||||||||||||||    
T  26193 ttaagggatcaaaatgaaaccaaaaaataagttaggggaccaaaatagtaattaagccta 26252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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