View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14576_high_11 (Length: 244)
Name: NF14576_high_11
Description: NF14576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14576_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32808336 - 32808561
Alignment:
| Q |
1 |
atgcagaaggtattggctttgttgtggcttcaagtgaatgcaaattggatcaaattggagacttggcttatcctaatcaagcttttgcacaatttgttca |
100 |
Q |
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||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32808336 |
atgcagaaggtgttggctttgttgtggcttcaagtgaatacaaattgaatcaaattggagacttggcttatcctaatcaagcttttgcacaatttgttca |
32808435 |
T |
|
| Q |
101 |
caatgcaaaagatttccttaagataggtgatataccactatgtgttctccaggtacaaatatattcttgtcaatttatcatccttagtaaaggtttcctt |
200 |
Q |
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||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32808436 |
caatgcaaaagattttcttaagataggtgatctaccactatgtgttgtccaggtacaaatatattcttgtcaatttatcatccttagtaaaggtttcctt |
32808535 |
T |
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| Q |
201 |
aagtaaaggtttttgagattttgata |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32808536 |
aagtaaaggtttttgagattttgata |
32808561 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32825031 - 32825256
Alignment:
| Q |
1 |
atgcagaaggtattggctttgttgtggcttcaagtgaatgcaaattggatcaaattggagacttggcttatcctaatcaagcttttgcacaatttgttca |
100 |
Q |
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||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32825031 |
atgcagaaggtgttggctttgttgtggcttcaagtgaatacaaattgaatcaaattggagacttggcttatcctaatcaagcttttgcacaatttgttca |
32825130 |
T |
|
| Q |
101 |
caatgcaaaagatttccttaagataggtgatataccactatgtgttctccaggtacaaatatattcttgtcaatttatcatccttagtaaaggtttcctt |
200 |
Q |
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||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32825131 |
caatgcaaaagattttcttaagataggtgatctaccactatgtgttgtccaggtacaaatatattcttgtcaatttatcatccttagtaaaggtttcctt |
32825230 |
T |
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| Q |
201 |
aagtaaaggtttttgagattttgata |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32825231 |
aagtaaaggtttttgagattttgata |
32825256 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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