View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14576_low_15 (Length: 223)
Name: NF14576_low_15
Description: NF14576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14576_low_15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 27005251 - 27005473
Alignment:
| Q |
1 |
atgattggtatatccaatgtctactttcacttccattactaaccaatgactccactataagaaaaacttaatataaagatctactctcccatcaagttaa |
100 |
Q |
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| T |
27005251 |
atgattggtatatccaatgtctactttcacttccattactaaccaatgactccactataagaaaaacttaatataaagatctactctcccatcaagttaa |
27005350 |
T |
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| Q |
101 |
ctttgctctagtaccacttgttggagagcccccaaaacacagggagcaacaactagttaataatcaggaacaacaaaagactgaaacaccacatttccac |
200 |
Q |
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| T |
27005351 |
cttggctctggtaccacttgttggagagcccccgaaacacagggagcaacaacaagttaataatcaggaacaacaaaagactgaaacaccacatttccac |
27005450 |
T |
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| Q |
201 |
caaaaaccttagagcattaccca |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
27005451 |
caaaaaccttagagcattaccca |
27005473 |
T |
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