View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14577_low_10 (Length: 319)
Name: NF14577_low_10
Description: NF14577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14577_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 40 - 289
Target Start/End: Complemental strand, 22326449 - 22326200
Alignment:
| Q |
40 |
atctgttgctgaatactatgcgaatctgcgactatatgatctatttatataacattctttagtgtttttattctatgtttttgtaaaactaaacactgtt |
139 |
Q |
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| T |
22326449 |
atctgttgctgaattctatgcgaatctgcgactatatgatctatttatataacattctttagtgtttttattcaatgtttttgtaaaactaaacactgtt |
22326350 |
T |
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| Q |
140 |
ttttgtatttctttagagaaagaactggaaagaaaaacaatggcctatcttgtcaaatctgtgggttacgttgctcaatggaaattgaatgtcaacaact |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
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| T |
22326349 |
ttttgtatttctttagagaaagaactggaaagaaaaacaatggcctatcttgtcaaatcagtgggttaccttgctcaatggaaattgaatgtcaacaact |
22326250 |
T |
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| Q |
240 |
tggatcagaatgaacccaaacacatatccaatacattcaaaattgatatg |
289 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
22326249 |
tggatcagaatgaacccaaacacatatccgatacattcaaaattgatatg |
22326200 |
T |
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