View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14577_low_11 (Length: 316)
Name: NF14577_low_11
Description: NF14577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14577_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 17 - 305
Target Start/End: Original strand, 38035389 - 38035677
Alignment:
| Q |
17 |
caaaccctaaattcaaaatccaaatccaacaacaacgaatcaaattccgatgcagaaagaagaatcgaaagactctccctacacctaaacccaattcctc |
116 |
Q |
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| T |
38035389 |
caaaccctaaattcaaaatccaaatccaacaacaacgaatcaaattccgatgcagaaagaagaatcgaaagactctccctacacctaaacccaattcctc |
38035488 |
T |
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| Q |
117 |
atctctcatggaataacatagagatggaaaattgcagtcgtgggaagaaattaatcgtggacacaaattctctctcaggttacatgagaggaaaacacag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
38035489 |
atctctcatggaataacatagagatggaaaattgcagtcgtgggaagaaattaatcgtggacacaaattccctctcaggttacatgagaggaaaacacag |
38035588 |
T |
|
| Q |
217 |
agagattcaagagaaaattttcgattacttcaacgctaatccacatcttcaaacccctattgaaatttccaaagataatcaccgagaat |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38035589 |
agagattcaagagaaaattttcgattacttcaacgctaatccacatcttcaaacccctattgaaatttccaaagataatcaccgagaat |
38035677 |
T |
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