View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14577_low_17 (Length: 213)

Name: NF14577_low_17
Description: NF14577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14577_low_17
NF14577_low_17
[»] chr5 (34 HSPs)
chr5 (9-213)||(35232633-35232839)
chr5 (176-213)||(972595-972632)
chr5 (176-213)||(1277528-1277565)
chr5 (176-213)||(19836088-19836125)
chr5 (176-213)||(23219115-23219152)
chr5 (176-213)||(26310749-26310786)
chr5 (176-213)||(27003964-27004001)
chr5 (176-213)||(32273979-32274016)
chr5 (176-213)||(40596046-40596083)
chr5 (176-212)||(24051494-24051530)
chr5 (183-213)||(9068893-9068923)
chr5 (175-213)||(43070684-43070722)
chr5 (176-213)||(671060-671097)
chr5 (176-213)||(4444867-4444904)
chr5 (176-213)||(5203643-5203680)
chr5 (176-213)||(9053972-9054009)
chr5 (176-213)||(9362500-9362537)
chr5 (176-213)||(10393503-10393540)
chr5 (176-213)||(18990535-18990572)
chr5 (175-208)||(19090532-19090565)
chr5 (184-213)||(19867290-19867319)
chr5 (176-213)||(21067527-21067564)
chr5 (176-213)||(24638044-24638081)
chr5 (176-213)||(27389749-27389786)
chr5 (176-213)||(28489274-28489311)
chr5 (176-213)||(29402100-29402137)
chr5 (176-213)||(36245995-36246032)
chr5 (176-213)||(36727077-36727114)
chr5 (176-213)||(37067788-37067825)
chr5 (176-213)||(38975739-38975776)
chr5 (176-213)||(40292660-40292697)
chr5 (176-213)||(41562548-41562585)
chr5 (176-213)||(42645464-42645501)
chr5 (176-208)||(14303241-14303273)
[»] chr7 (27 HSPs)
chr7 (175-213)||(27339728-27339766)
chr7 (175-213)||(37117845-37117883)
chr7 (175-213)||(45594890-45594928)
chr7 (176-213)||(2228081-2228118)
chr7 (176-213)||(35196963-35197000)
chr7 (176-213)||(38261091-38261128)
chr7 (176-213)||(43188622-43188659)
chr7 (178-213)||(31807052-31807087)
chr7 (175-213)||(7264495-7264533)
chr7 (175-213)||(33906373-33906411)
chr7 (176-213)||(1323773-1323810)
chr7 (176-213)||(2286094-2286131)
chr7 (176-213)||(6327301-6327338)
chr7 (176-213)||(8522788-8522825)
chr7 (175-212)||(10166960-10166997)
chr7 (176-213)||(10703892-10703929)
chr7 (176-213)||(13769626-13769663)
chr7 (176-213)||(17895724-17895761)
chr7 (176-213)||(30627714-30627751)
chr7 (176-213)||(31299996-31300033)
chr7 (176-213)||(33512887-33512924)
chr7 (176-213)||(40809135-40809172)
chr7 (176-213)||(45041734-45041771)
chr7 (176-213)||(46715691-46715728)
chr7 (176-212)||(5222576-5222612)
chr7 (175-211)||(30552496-30552532)
chr7 (177-213)||(36254216-36254252)
[»] chr6 (13 HSPs)
chr6 (175-213)||(22721343-22721381)
chr6 (176-213)||(9727585-9727622)
chr6 (176-213)||(14465826-14465863)
chr6 (183-213)||(30614922-30614952)
chr6 (176-213)||(2314598-2314635)
chr6 (175-212)||(2395557-2395594)
chr6 (176-213)||(5603448-5603485)
chr6 (176-213)||(10318888-10318925)
chr6 (176-213)||(12473737-12473774)
chr6 (176-213)||(24571618-24571655)
chr6 (176-213)||(35164606-35164643)
chr6 (176-212)||(7099034-7099070)
chr6 (176-212)||(31062948-31062984)
[»] chr3 (27 HSPs)
chr3 (175-213)||(49285598-49285636)
chr3 (176-213)||(9493588-9493625)
chr3 (176-213)||(11250048-11250085)
chr3 (176-213)||(16687551-16687588)
chr3 (176-213)||(35107293-35107330)
chr3 (176-213)||(35359807-35359844)
chr3 (176-213)||(35966332-35966369)
chr3 (176-213)||(36518190-36518227)
chr3 (177-213)||(36540195-36540231)
chr3 (176-210)||(10752415-10752449)
chr3 (175-213)||(19921312-19921350)
chr3 (183-213)||(23525916-23525946)
chr3 (176-213)||(31990041-31990079)
chr3 (175-213)||(43904495-43904533)
chr3 (175-213)||(46311445-46311483)
chr3 (176-213)||(6419666-6419703)
chr3 (176-213)||(9318607-9318644)
chr3 (176-213)||(11056073-11056110)
chr3 (176-213)||(20625653-20625690)
chr3 (176-213)||(28731937-28731974)
chr3 (176-213)||(40559764-40559801)
chr3 (176-213)||(40639692-40639729)
chr3 (176-213)||(46316478-46316515)
chr3 (176-213)||(47570373-47570410)
chr3 (176-213)||(48209432-48209469)
chr3 (176-213)||(52256753-52256790)
chr3 (176-208)||(45521067-45521099)
[»] chr1 (24 HSPs)
chr1 (175-213)||(42630985-42631023)
chr1 (175-213)||(50145132-50145170)
chr1 (176-213)||(12663677-12663714)
chr1 (176-213)||(49948331-49948368)
chr1 (176-213)||(50905525-50905562)
chr1 (176-212)||(2208898-2208934)
chr1 (176-212)||(15331063-15331099)
chr1 (175-213)||(16689176-16689214)
chr1 (175-213)||(45007692-45007730)
chr1 (176-213)||(2112837-2112874)
chr1 (176-213)||(5598391-5598428)
chr1 (176-213)||(6669396-6669433)
chr1 (176-213)||(8193963-8194000)
chr1 (176-213)||(16939536-16939573)
chr1 (176-213)||(24254412-24254449)
chr1 (176-213)||(27856087-27856124)
chr1 (175-212)||(30455281-30455318)
chr1 (176-213)||(43086472-43086509)
chr1 (176-213)||(43907225-43907262)
chr1 (176-213)||(45566710-45566747)
chr1 (176-213)||(47429593-47429630)
chr1 (176-213)||(48731757-48731794)
chr1 (176-213)||(52492682-52492719)
chr1 (176-212)||(44623019-44623055)
[»] scaffold0057 (1 HSPs)
scaffold0057 (176-213)||(64373-64410)
[»] chr8 (26 HSPs)
chr8 (176-213)||(3673844-3673881)
chr8 (176-213)||(5917372-5917409)
chr8 (176-213)||(14725392-14725429)
chr8 (176-213)||(20662612-20662649)
chr8 (176-213)||(34642438-34642475)
chr8 (176-213)||(35058415-35058452)
chr8 (178-213)||(10286468-10286503)
chr8 (178-213)||(20099655-20099690)
chr8 (175-213)||(24241898-24241936)
chr8 (179-213)||(41746654-41746688)
chr8 (176-213)||(14188180-14188217)
chr8 (176-213)||(16395463-16395500)
chr8 (176-213)||(17919816-17919853)
chr8 (176-213)||(19649499-19649536)
chr8 (176-213)||(32922871-32922908)
chr8 (176-213)||(33067391-33067428)
chr8 (176-213)||(36586572-36586609)
chr8 (176-213)||(37295216-37295253)
chr8 (176-213)||(37817466-37817503)
chr8 (176-213)||(43105880-43105917)
chr8 (177-213)||(5700649-5700685)
chr8 (176-212)||(10617875-10617911)
chr8 (177-213)||(13634936-13634972)
chr8 (177-213)||(13735349-13735385)
chr8 (176-208)||(35810332-35810364)
chr8 (175-211)||(43642302-43642338)
[»] chr4 (25 HSPs)
chr4 (176-213)||(7413182-7413219)
chr4 (176-213)||(7459262-7459299)
chr4 (176-213)||(32233702-32233739)
chr4 (176-213)||(47462037-47462074)
chr4 (175-212)||(48860093-48860130)
chr4 (176-213)||(51425417-51425454)
chr4 (176-213)||(54864486-54864523)
chr4 (176-212)||(27009349-27009385)
chr4 (175-213)||(18371436-18371474)
chr4 (175-213)||(39997773-39997811)
chr4 (175-213)||(51281558-51281596)
chr4 (183-213)||(54096948-54096978)
chr4 (175-209)||(54297314-54297348)
chr4 (176-213)||(8810770-8810807)
chr4 (176-213)||(9064789-9064826)
chr4 (176-213)||(11371061-11371098)
chr4 (175-212)||(17481023-17481060)
chr4 (176-213)||(25586328-25586365)
chr4 (176-213)||(28033282-28033319)
chr4 (176-213)||(28187161-28187198)
chr4 (176-213)||(28983822-28983859)
chr4 (176-213)||(31375203-31375240)
chr4 (176-213)||(51675668-51675705)
chr4 (177-213)||(939677-939713)
chr4 (176-212)||(36752450-36752486)
[»] chr2 (19 HSPs)
chr2 (176-213)||(15488839-15488876)
chr2 (176-213)||(18055949-18055986)
chr2 (176-213)||(19967824-19967861)
chr2 (176-213)||(29740959-29740996)
chr2 (176-213)||(43461335-43461372)
chr2 (176-210)||(18469433-18469467)
chr2 (183-213)||(33898320-33898350)
chr2 (175-212)||(6598487-6598524)
chr2 (176-213)||(10202260-10202297)
chr2 (176-213)||(16010614-16010651)
chr2 (176-213)||(18677899-18677936)
chr2 (176-213)||(18999419-18999456)
chr2 (176-213)||(19593613-19593650)
chr2 (176-213)||(23497513-23497550)
chr2 (176-209)||(30413271-30413304)
chr2 (176-213)||(36685404-36685441)
chr2 (176-213)||(38082909-38082946)
chr2 (176-208)||(19832245-19832277)
chr2 (176-208)||(35687788-35687820)
[»] scaffold0014 (1 HSPs)
scaffold0014 (178-213)||(195831-195866)
[»] scaffold0882 (1 HSPs)
scaffold0882 (175-213)||(3697-3735)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 4e-80; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 35232839 - 35232633
Alignment:
Q  9 atatttaaattgtttcatgtgcttttgggataacaacttatttatctattgcccaaagataaagcttttataatccaactgcgaaaacgaaagctgctat 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35232839 atatttaaattgtttcatgtgcttttgggataacaacttatttatctattgcccaaagataaagcttttataatccaactgcgaaaacgaaagctgctat 35232740  T
Q  109 tgtttgtatgcagtaatggtatctcaattgtatttaattaagctt-ttttaagggtgta-nnnnnnnnatagataaacgaaatgacaaagtcattataaa 206  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||          |||||  ||||||||||||||||||||||||    
T  35232739 tgtttgtatgcagtgatggtatctcaattgtatttaattaagctttttttaagggtgtattttttttggtagatctacgaaatgacaaagtcattataaa 35232640  T
Q  207 ctcacac 213  Q
    |||||||    
T  35232639 ctcacac 35232633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 972595 - 972632
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  972595 tagatagacgaaatgacaaagtcattataaactcacac 972632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 1277565 - 1277528
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  1277565 tagatagacgaaatgacaaagtcattataaactcacac 1277528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 19836088 - 19836125
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  19836088 tagatagacgaaatgacaaagtcattataaactcacac 19836125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 23219115 - 23219152
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  23219115 tagatagacgaaatgacaaagtcattataaactcacac 23219152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 26310749 - 26310786
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  26310749 tagatagacgaaatgacaaagtcattataaactcacac 26310786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 27003964 - 27004001
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27003964 tagatagacgaaatgacaaagtcattataaactcacac 27004001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 32273979 - 32274016
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  32273979 tagatagacgaaatgacaaagtcattataaactcacac 32274016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 40596083 - 40596046
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40596083 tagatagacgaaatgacaaagtcattataaactcacac 40596046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 24051530 - 24051494
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| ||||||||||||||||||||||||||||||    
T  24051530 tagatagacgaaatgacaaagtcattataaactcaca 24051494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 9068923 - 9068893
Alignment:
Q  183 acgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||||||||||||    
T  9068923 acgaaatgacaaagtcattataaactcacac 9068893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 43070684 - 43070722
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  43070684 atagatagacgaaatggcaaagtcattataaactcacac 43070722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 671060 - 671097
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  671060 tagatagacgaaatggcaaagtcattataaactcacac 671097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 4444867 - 4444904
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  4444867 tagatagacgaaatgacaaaggcattataaactcacac 4444904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 5203680 - 5203643
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| || ||||||||||||||||||||||||||||    
T  5203680 tagatagacaaaatgacaaagtcattataaactcacac 5203643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 9053972 - 9054009
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  9053972 tagatagacgaaatgacaaagccattataaactcacac 9054009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 9362500 - 9362537
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  9362500 tagatagacgaaacgacaaagtcattataaactcacac 9362537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 10393503 - 10393540
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  10393503 tagatagacgaaatgacaaagccattataaactcacac 10393540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 18990535 - 18990572
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  18990535 tagatagacgaaatgataaagtcattataaactcacac 18990572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 19090565 - 19090532
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaact 208  Q
    ||||||| ||||||||||||||||||||||||||    
T  19090565 atagatagacgaaatgacaaagtcattataaact 19090532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 19867290 - 19867319
Alignment:
Q  184 cgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||||||||||||||||||    
T  19867290 cgaaatgacaaagtcattataaactcacac 19867319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 21067564 - 21067527
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  21067564 tagatagacgaaatgacaaagttattataaactcacac 21067527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 24638081 - 24638044
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  24638081 tagatagacgaaatgataaagtcattataaactcacac 24638044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 27389786 - 27389749
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  27389786 tagatatacgaaataacaaagtcattataaactcacac 27389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 28489311 - 28489274
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  28489311 tagatagacgaaatggcaaagtcattataaactcacac 28489274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 29402137 - 29402100
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  29402137 tagatagacgaaatgacaaaatcattataaactcacac 29402100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 36245995 - 36246032
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  36245995 tagatagacgaaatgtcaaagtcattataaactcacac 36246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 36727114 - 36727077
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  36727114 tagatagacgaaatggcaaagtcattataaactcacac 36727077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 37067825 - 37067788
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  37067825 tagatagacgaaatggcaaagtcattataaactcacac 37067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 38975739 - 38975776
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  38975739 tagatagacgaaatgacaaagccattataaactcacac 38975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 40292697 - 40292660
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  40292697 tagataaacgaaatggcaaaatcattataaactcacac 40292660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 41562585 - 41562548
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  41562585 tagataaacgaaatggcaaagccattataaactcacac 41562548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 42645464 - 42645501
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  42645464 tagatagacgaaatgacaaagccattataaactcacac 42645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 14303241 - 14303273
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaact 208  Q
    |||||| ||||||||||||||||||||||||||    
T  14303241 tagatagacgaaatgacaaagtcattataaact 14303273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 27339728 - 27339766
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  27339728 atagatagacgaaatgacaaagtcattataaactcacac 27339766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 37117845 - 37117883
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  37117845 atagataaacgaaatgacaaagccattataaactcacac 37117883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 45594928 - 45594890
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  45594928 atagatagacgaaatgacaaagtcattataaactcacac 45594890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 2228081 - 2228118
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  2228081 tagatagacgaaatgacaaagtcattataaactcacac 2228118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 35197000 - 35196963
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35197000 tagatatacgaaatgacaaagtcattataaactcacac 35196963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 38261128 - 38261091
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  38261128 tagatagacgaaatgacaaagtcattataaactcacac 38261091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 43188659 - 43188622
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  43188659 tagatagacgaaatgacaaagtcattataaactcacac 43188622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 31807052 - 31807087
Alignment:
Q  178 gataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||| |||||||||||||||||||||||||||||||    
T  31807052 gatagacgaaatgacaaagtcattataaactcacac 31807087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 7264533 - 7264495
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  7264533 atagatagacgaaatggcaaagtcattataaactcacac 7264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 33906411 - 33906373
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  33906411 atagatagacgaaatgacaaagccattataaactcacac 33906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 1323810 - 1323773
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  1323810 tagatagacgaaatggcaaagtcattataaactcacac 1323773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 2286094 - 2286131
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  2286094 tagatagacggaatgacaaagtcattataaactcacac 2286131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 6327338 - 6327301
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  6327338 tagatagacgaaatggcaaagtcattataaactcacac 6327301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 8522788 - 8522825
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  8522788 tagatagacgaaataacaaagtcattataaactcacac 8522825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 10166997 - 10166960
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcaca 212  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  10166997 atagatagacgaaatgacaaagccattataaactcaca 10166960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 10703892 - 10703929
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  10703892 tagatagacgaaatgacaaagccattataaactcacac 10703929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 13769626 - 13769663
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  13769626 tagataaacgaaatgacaaagccattataaaatcacac 13769663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 17895761 - 17895724
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  17895761 tagatagacgaaatgacaaagccattataaactcacac 17895724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 30627751 - 30627714
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  30627751 tagatagacgaaatgacaaagtcattgtaaactcacac 30627714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 31299996 - 31300033
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  31299996 tagatagacgaaatgacaaagttattataaactcacac 31300033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 33512924 - 33512887
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  33512924 tagatagacgaaatgacaaagccattataaactcacac 33512887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 40809172 - 40809135
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  40809172 tagatagacgaaatggcaaagtcattataaactcacac 40809135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 45041734 - 45041771
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  45041734 tagatagacgaaatggcaaagtcattataaactcacac 45041771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 46715691 - 46715728
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  46715691 tagatagacggaatgacaaagtcattataaactcacac 46715728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 5222576 - 5222612
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| |||||||| |||||||||||||||||||||    
T  5222576 tagatagacgaaatggcaaagtcattataaactcaca 5222612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 30552532 - 30552496
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcac 211  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  30552532 atagatagacgaaatgacaaagttattataaactcac 30552496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 36254252 - 36254216
Alignment:
Q  177 agataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  36254252 agatatacgaaatggcaaagtcattataaactcacac 36254216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000007; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 22721381 - 22721343
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  22721381 atagatagacgaaatgacaaagtcattataaactcacac 22721343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 9727622 - 9727585
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9727622 tagatagacgaaatgacaaagtcattataaactcacac 9727585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 14465826 - 14465863
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  14465826 tagatagacgaaatgacaaagtcattataaactcacac 14465863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 30614922 - 30614952
Alignment:
Q  183 acgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||||||||||||    
T  30614922 acgaaatgacaaagtcattataaactcacac 30614952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 2314598 - 2314635
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  2314598 tagatagacgaaatggcaaagtcattataaactcacac 2314635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 2395557 - 2395594
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcaca 212  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  2395557 atagatagacgaaatgacaaagccattataaactcaca 2395594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 5603448 - 5603485
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  5603448 tagatagacgaaatggcaaagtcattataaactcacac 5603485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 10318888 - 10318925
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  10318888 tagatagacgaaatgacaaagtcattataatctcacac 10318925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 12473774 - 12473737
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  12473774 tagatagacgaaatgacaaaatcattataaactcacac 12473737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 24571618 - 24571655
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  24571618 tagatagacgaaatgacaaagtcattataaacttacac 24571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 35164606 - 35164643
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  35164606 tagatagacgaaatgacaaagccattataaactcacac 35164643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 7099070 - 7099034
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  7099070 tagatagacgaaatgataaagtcattataaactcaca 7099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 31062948 - 31062984
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  31062948 tagatagacgaaatgataaagtcattataaactcaca 31062984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000007; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 49285636 - 49285598
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  49285636 atagatagacgaaatgacaaagtcattataaactcacac 49285598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 9493625 - 9493588
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9493625 tagatatacgaaatgacaaagtcattataaactcacac 9493588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 11250085 - 11250048
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  11250085 tagatagacgaaatgacaaagtcattataaactcacac 11250048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 16687551 - 16687588
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  16687551 tagataaacgaaatgacaaagccattataaactcacac 16687588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 35107330 - 35107293
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35107330 tagataaacgaaatgacaaaatcattataaactcacac 35107293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 35359844 - 35359807
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35359844 tagatagacgaaatgacaaagtcattataaactcacac 35359807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 35966369 - 35966332
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35966369 tagatagacgaaatgacaaagtcattataaactcacac 35966332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 36518227 - 36518190
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  36518227 tagatagacgaaatgacaaagtcattataaactcacac 36518190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 36540231 - 36540195
Alignment:
Q  177 agataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36540231 agatagacgaaatgacaaagtcattataaactcacac 36540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 10752449 - 10752415
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactca 210  Q
    |||||| ||||||||||||||||||||||||||||    
T  10752449 tagatagacgaaatgacaaagtcattataaactca 10752415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 19921312 - 19921350
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  19921312 atagatagacgaaatggcaaagtcattataaactcacac 19921350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 23525916 - 23525946
Alignment:
Q  183 acgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||||||||||||    
T  23525916 acgaaatgacaaagtcattataaactcacac 23525946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 31990079 - 31990041
Alignment:
Q  176 tagataaacgaaa-tgacaaagtcattataaactcacac 213  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  31990079 tagataaacgaaaatgacaaagtcattataaactcacac 31990041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 43904495 - 43904533
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  43904495 atagatagacgaaatgacaaagttattataaactcacac 43904533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 46311445 - 46311483
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  46311445 atagatagacgaaatggcaaagtcattataaactcacac 46311483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 6419666 - 6419703
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  6419666 tagatagacgaaatgacaaagttattataaactcacac 6419703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 9318644 - 9318607
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  9318644 tagatagacgaaatgacaaaatcattataaactcacac 9318607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 11056073 - 11056110
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11056073 tagatagacgaaatgacaaagccattataaactcacac 11056110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 20625653 - 20625690
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  20625653 tagatagacgaaatgacaaagtcattgtaaactcacac 20625690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 28731974 - 28731937
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  28731974 tagatagacgaaatgacaaagtcattgtaaactcacac 28731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 40559801 - 40559764
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  40559801 tagatagacgaaatgacaaagccattataaactcacac 40559764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 40639729 - 40639692
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  40639729 tagatagacgaaatgacaaagccattataaactcacac 40639692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 46316478 - 46316515
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  46316478 tagatagacgaaatgacaaagttattataaactcacac 46316515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 47570410 - 47570373
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| || ||||||||||||||||||||||||||||    
T  47570410 tagatagacaaaatgacaaagtcattataaactcacac 47570373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 48209432 - 48209469
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  48209432 tagatagacgaaatgacaaagtcattataagctcacac 48209469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 52256753 - 52256790
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  52256753 tagatagacgaaatggcaaagtcattataaactcacac 52256790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 45521067 - 45521099
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaact 208  Q
    |||||| ||||||||||||||||||||||||||    
T  45521067 tagatagacgaaatgacaaagtcattataaact 45521099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000007; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 42630985 - 42631023
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  42630985 atagatagacgaaatgacaaagtcattataaactcacac 42631023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 50145132 - 50145170
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  50145132 atagatagacgaaatgacaaagtcattataaactcacac 50145170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 12663714 - 12663677
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  12663714 tagatagacgaaatgacaaagtcattataaactcacac 12663677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 49948368 - 49948331
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  49948368 tagatagacgaaatgacaaagtcattataaactcacac 49948331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 50905562 - 50905525
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  50905562 tagataaacgagatgacaaagtcattataaactcacac 50905525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 2208898 - 2208934
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| ||||||||||||||||||||||||||||||    
T  2208898 tagatagacgaaatgacaaagtcattataaactcaca 2208934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 15331063 - 15331099
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| ||||||||||||||||||||||||||||||    
T  15331063 tagatagacgaaatgacaaagtcattataaactcaca 15331099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 16689214 - 16689176
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  16689214 atagatacacgaaatgacaaagccattataaactcacac 16689176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 45007692 - 45007730
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  45007692 atagatagacgaaatgacaaagccattataaactcacac 45007730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 2112874 - 2112837
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  2112874 tagatagacgaaatgacaaagccattataaactcacac 2112837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 5598428 - 5598391
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  5598428 tagatagacgaaatgacaaagccattataaactcacac 5598391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 6669433 - 6669396
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  6669433 tagataaatgaaatgacaaagccattataaactcacac 6669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 8193963 - 8194000
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  8193963 tagatagacgaaatggcaaagtcattataaactcacac 8194000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 16939573 - 16939536
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  16939573 tagataaacgaaatgacaaaggcatcataaactcacac 16939536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 24254412 - 24254449
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  24254412 tagatagacgaaatgataaagtcattataaactcacac 24254449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 27856124 - 27856087
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  27856124 tagatagacgaaatgaaaaagtcattataaactcacac 27856087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 30455318 - 30455281
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcaca 212  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  30455318 atagatagacgaaatggcaaagtcattataaactcaca 30455281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 43086472 - 43086509
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  43086472 tagatagacgaaatgacaaagccattataaactcacac 43086509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 43907225 - 43907262
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  43907225 tagatagacgaaatgacaaagccattataaactcacac 43907262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 45566710 - 45566747
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  45566710 tagatagacgaaatggcaaagtcattataaactcacac 45566747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 47429593 - 47429630
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  47429593 tagatagacgaaatgacaaagccattataaactcacac 47429630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 48731757 - 48731794
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  48731757 tagatagacgaaatgacaaagccattataaactcacac 48731794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 52492682 - 52492719
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  52492682 tagatagacgaaatgataaagtcattataaactcacac 52492719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 44623019 - 44623055
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| |||||||||||||| |||||||||||||||    
T  44623019 tagatagacgaaatgacaaagccattataaactcaca 44623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 64410 - 64373
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  64410 tagatagacgaaatgacaaagtcattataaactcacac 64373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 3673844 - 3673881
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  3673844 tagatagacgaaatgacaaagtcattataaactcacac 3673881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 5917409 - 5917372
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  5917409 tagatagacgaaatgacaaagtcattataaactcacac 5917372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 14725429 - 14725392
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  14725429 tagatagacgaaatgacaaagtcattataaactcacac 14725392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 20662649 - 20662612
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  20662649 tagatagacgaaatgacaaagtcattataaactcacac 20662612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 34642438 - 34642475
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34642438 tagatagacgaaatgacaaagtcattataaactcacac 34642475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 35058452 - 35058415
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35058452 tagatagacgaaatgacaaagtcattataaactcacac 35058415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 10286468 - 10286503
Alignment:
Q  178 gataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||| |||||||||||||||||||||||||||||||    
T  10286468 gatagacgaaatgacaaagtcattataaactcacac 10286503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 20099655 - 20099690
Alignment:
Q  178 gataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||| ||||||||||||||||||||||    
T  20099655 gataaacgaaatggcaaagtcattataaactcacac 20099690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 24241898 - 24241936
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  24241898 atagatagacgaaatgacaaagtcattataaattcacac 24241936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 41746654 - 41746688
Alignment:
Q  179 ataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||| ||||||||||||||    
T  41746654 ataaacgaaatgacaaagtctttataaactcacac 41746688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 14188217 - 14188180
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  14188217 tagatagacgaaatggcaaagtcattataaactcacac 14188180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 16395500 - 16395463
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  16395500 tagatagacgaaatggcaaagtcattataaactcacac 16395463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 17919816 - 17919853
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  17919816 tagatagacgaaatgacaaagccattataaactcacac 17919853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 19649499 - 19649536
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  19649499 tagatagacgaaatgacaaagccattataaactcacac 19649536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 32922871 - 32922908
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  32922871 tagatagacgaaatgacaaagccattataaactcacac 32922908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 33067391 - 33067428
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  33067391 tagatagacgaaatggcaaagtcattataaactcacac 33067428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 36586609 - 36586572
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  36586609 tagatagacgaaatgacaaagccattataaactcacac 36586572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 37295253 - 37295216
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  37295253 tagatagacgaaatgacaaagccattataaactcacac 37295216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 37817503 - 37817466
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  37817503 tagatagacgaaatgacaaagccattataaactcacac 37817466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 43105880 - 43105917
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| | |||||||||||||||||||||||||||||    
T  43105880 tagatagatgaaatgacaaagtcattataaactcacac 43105917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 5700649 - 5700685
Alignment:
Q  177 agataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  5700649 agatagacgaaatggcaaagtcattataaactcacac 5700685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 10617911 - 10617875
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| |||||||| |||||||||||||||||||||    
T  10617911 tagatagacgaaatggcaaagtcattataaactcaca 10617875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 13634972 - 13634936
Alignment:
Q  177 agataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||| || ||||||||||||||||||||||||||||    
T  13634972 agatagacaaaatgacaaagtcattataaactcacac 13634936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 13735385 - 13735349
Alignment:
Q  177 agataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||| || ||||||||||||||||||||||||||||    
T  13735385 agatagacaaaatgacaaagtcattataaactcacac 13735349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 35810364 - 35810332
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaact 208  Q
    |||||| ||||||||||||||||||||||||||    
T  35810364 tagatagacgaaatgacaaagtcattataaact 35810332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 43642302 - 43642338
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcac 211  Q
    ||||||| || ||||||||||||||||||||||||||    
T  43642302 atagatagacaaaatgacaaagtcattataaactcac 43642338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 7413219 - 7413182
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7413219 tagatagacgaaatgacaaagtcattataaactcacac 7413182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 7459299 - 7459262
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7459299 tagatagacgaaatgacaaagtcattataaactcacac 7459262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 32233739 - 32233702
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  32233739 tagatagacgaaatgacaaagtcattataaactcacac 32233702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 47462037 - 47462074
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  47462037 tagatagacgaaatgacaaagtcattataaactcacac 47462074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 48860130 - 48860093
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcaca 212  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  48860130 atagatagacgaaatgacaaagtcattataaactcaca 48860093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 51425454 - 51425417
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  51425454 tagatagacgaaatgacaaagtcattataaactcacac 51425417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 54864523 - 54864486
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  54864523 tagatagacgaaatgacaaagtcattataaactcacac 54864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 27009349 - 27009385
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27009349 tagataaatgaaatgacaaagtcattataaactcaca 27009385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 18371474 - 18371436
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  18371474 atagatagacgaaatgacaaagccattataaactcacac 18371436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 39997773 - 39997811
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  39997773 atagatagacgaaatggcaaagtcattataaactcacac 39997811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 51281596 - 51281558
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  51281596 atagatagacgaaatgacaaagtcattataaattcacac 51281558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 54096948 - 54096978
Alignment:
Q  183 acgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||||||||||||    
T  54096948 acgaaatgacaaagtcattataaactcacac 54096978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 54297314 - 54297348
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactc 209  Q
    ||||||| |||||||||||||||||||||||||||    
T  54297314 atagatagacgaaatgacaaagtcattataaactc 54297348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 8810770 - 8810807
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  8810770 tagatagacgaaataacaaagtcattataaactcacac 8810807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 9064789 - 9064826
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| || ||||||||||||||||||||||||||||    
T  9064789 tagatagacaaaatgacaaagtcattataaactcacac 9064826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 11371061 - 11371098
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  11371061 tagatagacgaaatggcaaagtcattataaactcacac 11371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 17481060 - 17481023
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcaca 212  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  17481060 atagatagacgaaatgacaaagccattataaactcaca 17481023  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 25586328 - 25586365
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  25586328 tagatagacgaaatgacaaagccattataaactcacac 25586365  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 28033319 - 28033282
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  28033319 tagatagacgaaatggcaaagtcattataaactcacac 28033282  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 28187161 - 28187198
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  28187161 tagatagacgaaatggcaaagtcattataaactcacac 28187198  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 28983859 - 28983822
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| || ||||||||||||||||||||||||||||    
T  28983859 tagatagacaaaatgacaaagtcattataaactcacac 28983822  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 31375240 - 31375203
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  31375240 tagatagacgaaatgacaaagtcattataaacttacac 31375203  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 51675668 - 51675705
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  51675668 tagatagacgaaatgacaaagccattataaactcacac 51675705  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 939713 - 939677
Alignment:
Q  177 agataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  939713 agatagacgaaatgacaaagttattataaactcacac 939677  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 36752486 - 36752450
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcaca 212  Q
    |||||| |||||||||||||| |||||||||||||||    
T  36752486 tagatagacgaaatgacaaagccattataaactcaca 36752450  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 15488876 - 15488839
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  15488876 tagatagacgaaatgacaaagtcattataaactcacac 15488839  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 18055986 - 18055949
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  18055986 tagatagacgaaatgacaaagtcattataaactcacac 18055949  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 19967861 - 19967824
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  19967861 tagatagacgaaatgacaaagtcattataaactcacac 19967824  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 29740959 - 29740996
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||||||| |||||||||||    
T  29740959 tagataaacgaaatgacaaagtcattgtaaactcacac 29740996  T

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Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 43461335 - 43461372
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||||||||||||||||    
T  43461335 tagatagacgaaatgacaaagtcattataaactcacac 43461372  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 18469433 - 18469467
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactca 210  Q
    |||||| ||||||||||||||||||||||||||||    
T  18469433 tagatagacgaaatgacaaagtcattataaactca 18469467  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 33898350 - 33898320
Alignment:
Q  183 acgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||||||||||||||||||    
T  33898350 acgaaatgacaaagtcattataaactcacac 33898320  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 6598524 - 6598487
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcaca 212  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  6598524 atagatagacgaaatgacaaagtcattataaattcaca 6598487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 10202297 - 10202260
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  10202297 tagatagacgaaatgacaaagccattataaactcacac 10202260  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 16010614 - 16010651
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  16010614 tagatagacgaaatgacaaagccattataaactcacac 16010651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 18677936 - 18677899
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  18677936 tagataaacgagatgacaaagtcattataaacccacac 18677899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 18999456 - 18999419
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  18999456 tagatagacgaaatgacaaagtcataataaactcacac 18999419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 19593650 - 19593613
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  19593650 tagataaacgaaatggcaaagccattataaactcacac 19593613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 23497513 - 23497550
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  23497513 tagatagacgaaatgacaaagccattataaactcacac 23497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 30413304 - 30413271
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactc 209  Q
    |||||| |||||||||||||||||||||||||||    
T  30413304 tagatagacgaaatgacaaagtcattataaactc 30413271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 36685404 - 36685441
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  36685404 tagatagacgaaatgacaaagttattataaactcacac 36685441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 38082909 - 38082946
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||||||||||||||  |||||||||||||||||||||    
T  38082909 tagataaacgaaatggtaaagtcattataaactcacac 38082946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 19832277 - 19832245
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaact 208  Q
    |||||| ||||||||||||||||||||||||||    
T  19832277 tagatagacgaaatgacaaagtcattataaact 19832245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 35687788 - 35687820
Alignment:
Q  176 tagataaacgaaatgacaaagtcattataaact 208  Q
    |||||| ||||||||||||||||||||||||||    
T  35687788 tagatagacgaaatgacaaagtcattataaact 35687820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 195866 - 195831
Alignment:
Q  178 gataaacgaaatgacaaagtcattataaactcacac 213  Q
    |||| |||||||||||||||||||||||||||||||    
T  195866 gatagacgaaatgacaaagtcattataaactcacac 195831  T

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Target: scaffold0882 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 3697 - 3735
Alignment:
Q  175 atagataaacgaaatgacaaagtcattataaactcacac 213  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  3697 atagatagacgaaatggcaaagtcattataaactcacac 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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