View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14579_high_28 (Length: 281)

Name: NF14579_high_28
Description: NF14579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14579_high_28
NF14579_high_28
[»] chr8 (1 HSPs)
chr8 (1-281)||(14441771-14442051)


Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 14442051 - 14441771
Alignment:
Q  1 tcatcattgtaacaattcattgagaaataacaagattcttcacacaatgctctctattttcttgtttggaggtctcaatttactttcttattacgcgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14442051 tcatcattgtaacaattcattgagaaataacaagattcttcacacaatgctctctattttcttgtttggaggtctcaatttactttcttattacgcgtca 14441952  T
Q  101 agccatacttgttaacaccatactaaaaaataatgacgtgtgatttcatttaaagatattttttccaacttaaatgacatttaatttccacgtttttcaa 200  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14441951 aaccatacttgttaacaccacactaaaaaataatgacgtgtgatttcatttaaagatattttttccaacttaaatgacatttaattttcacgtttttcaa 14441852  T
Q  201 tacctctttaataatggagttagttcctagctttcaaagtcaactaaatctttaataacgaacaatattataagcacatct 281  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14441851 tacctctttaataatggagttagttcctaactttcaaagtcaactaaatctttaataacgaacaatattataagcacatct 14441771  T

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