View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14579_low_16 (Length: 375)

Name: NF14579_low_16
Description: NF14579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14579_low_16
NF14579_low_16
[»] chr1 (29 HSPs)
chr1 (16-354)||(47071072-47071410)
chr1 (182-330)||(2506584-2506732)
chr1 (186-324)||(1085545-1085683)
chr1 (180-324)||(40709341-40709485)
chr1 (143-324)||(33643319-33643499)
chr1 (140-324)||(1344600-1344783)
chr1 (180-324)||(25268315-25268459)
chr1 (139-330)||(525110-525299)
chr1 (169-323)||(35927866-35928018)
chr1 (180-325)||(51303433-51303579)
chr1 (180-324)||(52707696-52707840)
chr1 (220-330)||(50079473-50079583)
chr1 (180-263)||(35512909-35512992)
chr1 (180-283)||(13386968-13387071)
chr1 (186-324)||(40287311-40287451)
chr1 (182-283)||(20607311-20607408)
chr1 (257-302)||(33673311-33673356)
chr1 (218-282)||(17622630-17622694)
chr1 (234-298)||(27739129-27739192)
chr1 (223-293)||(44210997-44211067)
chr1 (188-294)||(49946645-49946751)
chr1 (279-347)||(23536836-23536904)
chr1 (136-175)||(20607427-20607466)
chr1 (170-281)||(41498498-41498609)
chr1 (188-294)||(36285631-36285737)
chr1 (237-294)||(40095039-40095097)
chr1 (250-347)||(2859051-2859148)
chr1 (141-202)||(26941016-26941077)
chr1 (234-298)||(42742413-42742476)
[»] chr4 (42 HSPs)
chr4 (139-330)||(55080624-55080815)
chr4 (144-346)||(22186748-22186950)
chr4 (141-324)||(43961461-43961644)
chr4 (131-324)||(17182483-17182678)
chr4 (187-347)||(7977552-7977713)
chr4 (180-324)||(47846104-47846249)
chr4 (180-330)||(54576376-54576528)
chr4 (182-330)||(4437476-4437623)
chr4 (182-330)||(29993822-29993970)
chr4 (217-347)||(56135777-56135904)
chr4 (180-324)||(34995102-34995244)
chr4 (181-330)||(37761510-37761658)
chr4 (134-272)||(11089619-11089760)
chr4 (195-327)||(9030263-9030396)
chr4 (180-314)||(54001155-54001287)
chr4 (187-330)||(51329841-51329983)
chr4 (175-255)||(5825016-5825096)
chr4 (182-290)||(14539357-14539465)
chr4 (188-303)||(55510242-55510356)
chr4 (138-294)||(47433715-47433871)
chr4 (204-255)||(51075217-51075268)
chr4 (180-282)||(21694939-21695040)
chr4 (139-235)||(35543315-35543411)
chr4 (138-264)||(44145842-44145968)
chr4 (237-294)||(27735826-27735883)
chr4 (147-293)||(46007715-46007863)
chr4 (182-283)||(17938158-17938259)
chr4 (237-346)||(37711172-37711281)
chr4 (237-324)||(47846369-47846456)
chr4 (237-284)||(5730936-5730983)
chr4 (139-293)||(45741972-45742136)
chr4 (278-328)||(5824948-5824998)
chr4 (237-319)||(35248742-35248824)
chr4 (139-176)||(24565344-24565381)
chr4 (237-294)||(36151657-36151714)
chr4 (130-175)||(37711333-37711378)
chr4 (138-175)||(53260715-53260752)
chr4 (240-324)||(54935119-54935204)
chr4 (141-198)||(56135908-56135965)
chr4 (135-175)||(37711132-37711172)
chr4 (139-175)||(41174555-41174591)
chr4 (234-266)||(47694458-47694490)
[»] chr8 (31 HSPs)
chr8 (207-347)||(43826360-43826500)
chr8 (180-324)||(12022192-12022336)
chr8 (180-354)||(8815190-8815363)
chr8 (180-324)||(20472741-20472885)
chr8 (188-314)||(16024214-16024341)
chr8 (141-329)||(9933286-9933475)
chr8 (189-330)||(40633047-40633188)
chr8 (180-324)||(43732730-43732882)
chr8 (181-330)||(30365175-30365324)
chr8 (188-324)||(8671849-8671987)
chr8 (205-324)||(39449355-39449474)
chr8 (195-330)||(9434362-9434499)
chr8 (181-319)||(6453239-6453378)
chr8 (180-263)||(29937614-29937697)
chr8 (188-275)||(34196409-34196496)
chr8 (136-282)||(29358345-29358490)
chr8 (145-346)||(1026863-1027063)
chr8 (234-298)||(27487067-27487131)
chr8 (202-329)||(38021409-38021531)
chr8 (237-324)||(41103612-41103699)
chr8 (286-347)||(7394616-7394677)
chr8 (166-291)||(24243084-24243206)
chr8 (139-175)||(1027058-1027094)
chr8 (138-266)||(9718486-9718614)
chr8 (234-298)||(27483637-27483701)
chr8 (183-282)||(31738516-31738615)
chr8 (223-290)||(38198141-38198208)
chr8 (224-266)||(22591501-22591543)
chr8 (235-276)||(30581914-30581955)
chr8 (139-176)||(41103502-41103539)
chr8 (237-289)||(26167842-26167894)
[»] chr3 (32 HSPs)
chr3 (142-324)||(40858616-40858798)
chr3 (180-324)||(26135848-26135992)
chr3 (180-324)||(34641043-34641185)
chr3 (141-324)||(48683663-48683848)
chr3 (180-347)||(17474255-17474422)
chr3 (175-331)||(24253766-24253922)
chr3 (141-324)||(41414129-41414313)
chr3 (141-284)||(42772123-42772266)
chr3 (172-330)||(10943655-10943813)
chr3 (180-325)||(44412412-44412556)
chr3 (188-314)||(42699669-42699795)
chr3 (189-324)||(21090129-21090264)
chr3 (208-330)||(46978472-46978594)
chr3 (180-283)||(18086029-18086133)
chr3 (195-330)||(8432323-8432458)
chr3 (206-324)||(16884047-16884164)
chr3 (189-303)||(36727249-36727362)
chr3 (216-324)||(27197734-27197842)
chr3 (182-325)||(54985744-54985899)
chr3 (170-262)||(55428492-55428584)
chr3 (138-319)||(37102156-37102337)
chr3 (197-325)||(45663211-45663337)
chr3 (141-324)||(21773833-21774016)
chr3 (180-347)||(24560245-24560412)
chr3 (141-203)||(37102321-37102383)
chr3 (141-230)||(30200098-30200187)
chr3 (138-213)||(220405-220479)
chr3 (237-284)||(18654706-18654753)
chr3 (180-294)||(41110370-41110484)
chr3 (139-175)||(24560215-24560251)
chr3 (139-175)||(34641200-34641236)
chr3 (244-324)||(46204937-46205017)
[»] chr5 (21 HSPs)
chr5 (141-328)||(40305670-40305862)
chr5 (180-347)||(34980838-34981005)
chr5 (180-347)||(10043280-10043447)
chr5 (178-324)||(21580998-21581145)
chr5 (180-324)||(33744242-33744386)
chr5 (201-324)||(8551488-8551611)
chr5 (180-324)||(10204627-10204771)
chr5 (182-324)||(15986675-15986817)
chr5 (216-330)||(5688458-5688572)
chr5 (180-328)||(6597839-6597979)
chr5 (180-283)||(6382419-6382522)
chr5 (182-283)||(12035987-12036087)
chr5 (180-276)||(10043058-10043154)
chr5 (180-294)||(28279525-28279640)
chr5 (209-294)||(42681534-42681619)
chr5 (237-325)||(11756927-11757015)
chr5 (237-292)||(4373672-4373727)
chr5 (141-202)||(22023542-22023603)
chr5 (190-246)||(2183943-2183999)
chr5 (139-175)||(7544134-7544170)
chr5 (145-213)||(29002220-29002288)
[»] chr7 (34 HSPs)
chr7 (180-347)||(33519076-33519243)
chr7 (180-326)||(35422013-35422159)
chr7 (135-347)||(48013531-48013743)
chr7 (182-347)||(36267604-36267769)
chr7 (145-324)||(39646520-39646699)
chr7 (144-330)||(21857392-21857577)
chr7 (182-347)||(37925869-37926034)
chr7 (180-330)||(48881607-48881758)
chr7 (180-308)||(28074152-28074283)
chr7 (181-347)||(37620802-37620968)
chr7 (180-325)||(31364094-31364234)
chr7 (205-319)||(3215934-3216048)
chr7 (180-303)||(48015278-48015402)
chr7 (184-324)||(3143531-3143675)
chr7 (223-324)||(12670928-12671029)
chr7 (180-291)||(2087788-2087903)
chr7 (201-324)||(8122195-8122322)
chr7 (141-291)||(48093977-48094127)
chr7 (141-291)||(23116269-23116420)
chr7 (203-291)||(16833779-16833867)
chr7 (139-294)||(17852952-17853106)
chr7 (252-324)||(12682850-12682922)
chr7 (180-324)||(33655157-33655301)
chr7 (233-324)||(18795697-18795788)
chr7 (180-266)||(30592302-30592388)
chr7 (200-298)||(7791796-7791894)
chr7 (237-291)||(18063667-18063721)
chr7 (237-346)||(41497063-41497172)
chr7 (237-295)||(22163215-22163273)
chr7 (237-295)||(22221923-22221981)
chr7 (238-290)||(37417740-37417793)
chr7 (138-199)||(48881735-48881796)
chr7 (139-203)||(37417805-37417869)
chr7 (138-174)||(48152191-48152227)
[»] chr6 (25 HSPs)
chr6 (170-330)||(26318350-26318510)
chr6 (180-347)||(9051583-9051748)
chr6 (195-324)||(15323276-15323405)
chr6 (195-324)||(15353415-15353543)
chr6 (180-324)||(31798969-31799116)
chr6 (180-294)||(25468448-25468562)
chr6 (139-303)||(3841156-3841332)
chr6 (180-291)||(4097284-4097395)
chr6 (180-324)||(10293301-10293443)
chr6 (200-271)||(15373668-15373739)
chr6 (170-271)||(34176610-34176711)
chr6 (136-266)||(30849919-30850047)
chr6 (182-276)||(29692977-29693079)
chr6 (182-276)||(28477079-28477182)
chr6 (237-347)||(4097618-4097729)
chr6 (252-347)||(23091023-23091118)
chr6 (257-303)||(382980-383026)
chr6 (139-202)||(21606852-21606915)
chr6 (272-324)||(34177040-34177093)
chr6 (170-298)||(16738035-16738163)
chr6 (180-266)||(10818325-10818411)
chr6 (139-213)||(31849272-31849346)
chr6 (237-283)||(32926737-32926783)
chr6 (287-324)||(15373733-15373770)
chr6 (138-175)||(30487303-30487340)
[»] chr2 (35 HSPs)
chr2 (180-324)||(45257358-45257502)
chr2 (182-324)||(15085751-15085894)
chr2 (170-324)||(31061410-31061565)
chr2 (170-324)||(1052793-1052949)
chr2 (180-347)||(42296352-42296519)
chr2 (144-328)||(33265654-33265838)
chr2 (204-330)||(2381060-2381186)
chr2 (181-324)||(35325318-35325463)
chr2 (185-324)||(3094407-3094546)
chr2 (189-324)||(45098220-45098355)
chr2 (195-330)||(34187620-34187757)
chr2 (182-323)||(21502084-21502226)
chr2 (149-302)||(36052105-36052260)
chr2 (183-273)||(8554351-8554441)
chr2 (139-269)||(42813726-42813866)
chr2 (234-329)||(22356011-22356106)
chr2 (208-324)||(31928121-31928242)
chr2 (180-276)||(9313082-9313182)
chr2 (142-294)||(39821750-39821902)
chr2 (180-347)||(15224743-15224910)
chr2 (237-347)||(16713520-16713630)
chr2 (180-294)||(31795818-31795932)
chr2 (248-324)||(1270394-1270471)
chr2 (182-250)||(16713650-16713718)
chr2 (182-244)||(22356134-22356197)
chr2 (257-323)||(23739882-23739948)
chr2 (242-298)||(41778850-41778906)
chr2 (257-303)||(17333937-17333983)
chr2 (138-175)||(36347538-36347575)
chr2 (141-213)||(1583239-1583311)
chr2 (240-303)||(886988-887051)
chr2 (237-294)||(37739997-37740055)
chr2 (237-294)||(8426977-8427034)
chr2 (138-175)||(23748305-23748342)
chr2 (139-175)||(15224904-15224940)
[»] scaffold0119 (2 HSPs)
scaffold0119 (181-324)||(37434-37577)
scaffold0119 (248-324)||(30766-30843)
[»] scaffold0071 (2 HSPs)
scaffold0071 (138-324)||(52937-53120)
scaffold0071 (141-220)||(52896-52975)
[»] scaffold0026 (1 HSPs)
scaffold0026 (180-324)||(1446-1591)
[»] scaffold0095 (1 HSPs)
scaffold0095 (205-324)||(8198-8317)
[»] scaffold0007 (1 HSPs)
scaffold0007 (180-312)||(242275-242411)
[»] scaffold0012 (1 HSPs)
scaffold0012 (166-283)||(184698-184816)
[»] scaffold1414 (1 HSPs)
scaffold1414 (204-320)||(355-473)
[»] scaffold0240 (1 HSPs)
scaffold0240 (180-275)||(17640-17735)
[»] scaffold0067 (1 HSPs)
scaffold0067 (180-324)||(39236-39383)
[»] scaffold0018 (1 HSPs)
scaffold0018 (197-298)||(69272-69374)
[»] scaffold0294 (1 HSPs)
scaffold0294 (143-175)||(15472-15504)
[»] scaffold0006 (1 HSPs)
scaffold0006 (218-266)||(81498-81546)


Alignment Details
Target: chr1 (Bit Score: 311; Significance: 1e-175; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 47071410 - 47071072
Alignment:
Q  16 attatacttttgtggcatgtctaacgggaaaactgagaacttgacatcatcatcaaatttactcacttcattctagtccatccatctcggtatgcaaatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |     
T  47071410 attatacttttgtggcatgtctaacgggaaaactgagaacttgacatcatcatcaaatttactcacttcattctactccatccatctcggtatgcaagtc 47071311  T
Q  116 cattttgcttttttcaaattctttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |    
T  47071310 cattttgcttttttcaaattctttaagggtgtgtttggatgaagggtttaggaagggaagactaacttttcttttttaaattacggacattataaaatga 47071211  T
Q  216 tttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttac 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47071210 tttttagaaaatttaattaacaacatgataaatgatcataaaatatttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttac 47071111  T
Q  316 aaaataaaaatgaacaatgccctcccttccccctcctaa 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47071110 aaaataaaaatgaacaatgccctcccttccccctcctaa 47071072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 182 - 330
Target Start/End: Complemental strand, 2506732 - 2506584
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||||||||||| ||||| || |||||||||||||||||| |||||  ||||||||| || ||||||||||||| |||||||||||||||||||| ||||    
T  2506732 ttttcttttttaaattacagatattataaaataatttttaaaaaatcgaattaacaatataataaatgatcatataatacttcaaaaacacttaatttat 2506633  T
Q  282 tttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||||||||||||||||| |||| |||||||||| || ||||||||||||    
T  2506632 tttgaaaaaacattttatattggtcgtaatttaaaagataaaaatgaac 2506584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 1085545 - 1085683
Alignment:
Q  186 cttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttg 285  Q
    |||||||| ||||||||||||| ||||| |||||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| |||||||     
T  1085545 cttttttaaattacggacattagaaaatgatttttagaaaattgaactaacagcatgataaatgatcatataatacttcaaaaacacttaatttatttta 1085644  T
Q  286 aaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||||||||||| | |||||||||| |||||||||    
T  1085645 aaaaaacattttacatggttcgtaatttaaaaaataaaa 1085683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 40709341 - 40709485
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||| ||    
T  40709341 acttttcttttttaaattacgaatattataaaataatttttagaaaattaaattaacgatatgataaatgatcatataatacttcaaaaacacttaattt 40709440  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
     |||| ||||||| |||||||||| || ||||||| |||||||||    
T  40709441 ctttttaaaaaaccttttacattgttcataatttaaaaaataaaa 40709485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 143 - 324
Target Start/End: Complemental strand, 33643499 - 33643319
Alignment:
Q  143 ggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatg 242  Q
    |||||||||||||  ||||||||||| ||||  ||| | ||| |||||||| |||| | ||||| |||||| |||||||||||||| |||||| || |||    
T  33643499 ggtgtgtttggatagagggtttaggaggggagaatttaattt-cttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatg 33643401  T
Q  243 ataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    || |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||  |||||||||| |||||||||    
T  33643400 atgaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatttttcgtaatttaaaaaataaaa 33643319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 324
Target Start/End: Complemental strand, 1344783 - 1344600
Alignment:
Q  140 aagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaac 239  Q
    |||| |||||||||||| ||||||||||| ||||| ||| | |||||||||||| |||||||||||| |||||| |||||||||||||| ||  ||||||    
T  1344783 aaggatgtgtttggatggagggtttaggaggggaaaatttatttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaac 1344684  T
Q  240 atgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||| | |||| | ||| |||||||||||||| || |||| |||||||||||| ||||| | |||||||| |||||||||    
T  1344683 atgataaataaacatatattacatcaaaaacacttaa-ttttttttaaaaaacattttgcattgtttgtaatttaaaaaataaaa 1344600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 25268459 - 25268315
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||| |||||||| |||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| ||    
T  25268459 actttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaacgtgataaatgatcatataatacttcaaaaacacttaattt 25268360  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| |||| ||||||||||||| ||  |||||| || ||||||    
T  25268359 attttaaaaatacattttacattgttcaaaatttaaaatataaaa 25268315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 139 - 330
Target Start/End: Original strand, 525110 - 525299
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaa 238  Q
    ||||| ||||||||||||| || ||||||| |||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||    
T  525110 taaggatgtgtttggatgatggatttaggaggggaggatta-cttttcttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaa 525206  T
Q  239 catgataaatgatcataaaatacttcaaaaacacttaacttatttt-gaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
     |||||||||||| ||| ||||||||||| | |||||| |||||||  |||||||||||||| ||| | |||||||| ||| ||||| |||||    
T  525207 tatgataaatgattatataatacttcaaacaaacttaatttattttaaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaac 525299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 169 - 323
Target Start/End: Complemental strand, 35928018 - 35927866
Alignment:
Q  169 agggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaa 268  Q
    ||||| |||| |||||||||||||| ||||| ||  ||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  35928018 agggatgatttacttttcttttttaaattacagattttataaaataatttt-agaaaattgaattaacaacatgataaatgatcatataatacttcaaaa 35927920  T
Q  269 acacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaa 323  Q
    | |||||| |||||||  ||||| | ||||||||| || ||||||| ||||||||    
T  35927919 atacttaatttattttagaaaaata-tttacattgttcataatttaaaaaataaa 35927866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 51303433 - 51303579
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||| ||||||| |||||  ||| | |||||| ||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  51303433 acttttattttttatattaccaacaatgtaaaatgatttttttaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattt 51303532  T
Q  280 atttt-gaaaaaacattttacattgctcgtaatttacaaaataaaaa 325  Q
    |||||  ||||||  |||||||||| |||||||||| ||||||||||    
T  51303533 attttaaaaaaaatgttttacattgttcgtaatttaaaaaataaaaa 51303579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 52707840 - 52707696
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||  ||||||| |||||||||||  |||| || | ||||||||||||||||||| ||| ||||||||||||| || ||| ||    
T  52707840 acttttcttttttaaattaccaacattatcaaataatttttttaaaaatttaataacaacatgataaatgatgatataatacttcaaaaatacataattt 52707741  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| |||||||||||||||||| | ||| |||| |||||||||    
T  52707740 atttttaaaaaacattttacattgtttgtagtttaaaaaataaaa 52707696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 50079473 - 50079583
Alignment:
Q  220 tagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaa 319  Q
    |||||||||||| |||||| |||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||| |||| ||||| |||| | ||    
T  50079473 tagaaaatttaactaacaatatgataaatgatcatataatactttaaaaacacttaatttattttaaaaaaacattttatattgttcgtactttaaataa 50079572  T
Q  320 taaaaatgaac 330  Q
    |||||| ||||    
T  50079573 taaaaaggaac 50079583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 35512992 - 35512909
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatactt 263  Q
    |||||| ||||||| |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  35512992 acttttattttttaaattatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 13386968 - 13387071
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||  |||| |||||| ||||||  |||||||||||||| |||||||||||||||||||||||||| |||||   |||||||||||| ||    
T  13386968 acttttctttttttaattatggacatcataaaacgatttttagaaaattgaattaacaacatgataaatgatcatataatacacaaaaaacacttaattt 13387067  T
Q  280 attt 283  Q
    ||||    
T  13387068 attt 13387071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 40287311 - 40287451
Alignment:
Q  186 cttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttg 285  Q
    |||||||| |||| ||||||| | |||| | |||||||||||| ||||||||| || ||||||||| ||| |||||||||||||||||||| ||||||      
T  40287311 cttttttaaatta-ggacattgtgaaatgagttttagaaaattgaattaacaaaatcataaatgattatataatacttcaaaaacacttaatttatttaa 40287409  T
Q  286 aaaaa---acattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||   | ||||||||| | ||||| |||| |||||||||    
T  40287410 aaaaatatatattttacatagttcgtagtttaaaaaataaaa 40287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 20607408 - 20607311
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||| ||||||| |||| |||||||||||||| |||||| ||||||| ||||||||   ||||| || |||||| |||||||||||||||||||| ||||    
T  20607408 ttttttttttta-attatggacattataaaatgattttttgaaaattaaattaaca---tgatatattatcatataatacttcaaaaacacttaatttat 20607313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 33673356 - 33673311
Alignment:
Q  257 aatacttcaaaaacacttaacttattttgaaaaaacattttacatt 302  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||    
T  33673356 aatacttcaaaaacacttaacttattttaaaaaaatattttacatt 33673311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 17622694 - 17622630
Alignment:
Q  218 tttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttatt 282  Q
    |||| |||||| |||||| |||||||||| |||||||| |||||||| ||||||||||| |||||    
T  17622694 tttaaaaaattgaattaataacatgataagtgatcatataatacttctaaaacacttaatttatt 17622630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 27739192 - 27739129
Alignment:
Q  234 aacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 298  Q
    ||||||||||||||||||||| |||||||||||  |||||||| | ||||| |||||||||||||    
T  27739192 aacaacatgataaatgatcattaaatacttcaatcacacttaattgatttt-aaaaaacatttta 27739129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 44210997 - 44211067
Alignment:
Q  223 aaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaaca 293  Q
    |||||| || ||||||||||||||| ||||||| ||||||||||  |||||||| |||||||  |||||||    
T  44210997 aaaattaaaataacaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaca 44211067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 294
Target Start/End: Original strand, 49946645 - 49946751
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaa 287  Q
    |||||| |||||||||| ||||||||| |||||  ||| || |  ||  |||||||||||| |||||| ||||||||||  ||| |||| ||||||| ||    
T  49946645 tttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacatttaatttattttaaa 49946744  T
Q  288 aaaacat 294  Q
    |||||||    
T  49946745 aaaacat 49946751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 23536836 - 23536904
Alignment:
Q  279 tattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    |||||| |||||||||||||||||| || | ||||| ||||||||||||| |  | |||||||||||||    
T  23536836 tattttaaaaaaacattttacattgatcattatttaaaaaataaaaatgagccctcccctcccttcccc 23536904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 20607466 - 20607427
Alignment:
Q  136 ctttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  20607466 ctttaagggtgtgtttggatggagggtttaggaggggaag 20607427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 41498609 - 41498498
Alignment:
Q  170 gggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaa 269  Q
    |||| |||| ||||||| |||||| |||||||||| ||| ||||  ||| || ||| || |  ||  ||||||||||| ||||||| ||||||||||  |    
T  41498609 gggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatca 41498510  T
Q  270 cacttaacttat 281  Q
    ||||||||||||    
T  41498509 cacttaacttat 41498498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 294
Target Start/End: Original strand, 36285631 - 36285737
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaa 287  Q
    |||||| |||||| ||| ||||||||| |||||| ||| || |  ||  ||||||||||| ||||||| ||||||||||  |||||| |  |||||| ||    
T  36285631 tttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttgatatattttaaa 36285730  T
Q  288 aaaacat 294  Q
    |||||||    
T  36285731 aaaacat 36285737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 40095039 - 40095097
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttatttt-gaaaaaacat 294  Q
    ||||||||||| ||||||| ||||||||||  |||||||| ||||||| ||||||||||    
T  40095039 aacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacat 40095097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 2859051 - 2859148
Alignment:
Q  250 atcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    |||||| ||||||||||  |||||||| |||||||  |||||||| ||| || |  ||||||||| ||||||||| | |||  | |||||||||||||    
T  2859051 atcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccc 2859148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 26941077 - 26941016
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacgga 202  Q
    |||||||||||||||  ||||||||||| |||||| || | |||||||||||| | ||||||    
T  26941077 agggtgtgtttggattgagggtttaggaggggaaggttcaattttcttttttaaaatacgga 26941016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 42742413 - 42742476
Alignment:
Q  234 aacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 298  Q
    |||||||||||||||  ||||| | ||||||||  |||||||| ||||||| |||||||||||||    
T  42742413 aacaacatgataaatagtcatatagtacttcaatcacacttaatttatttt-aaaaaacatttta 42742476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 139 - 330
Target Start/End: Complemental strand, 55080815 - 55080624
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaa 238  Q
    |||||||||||||||||| ||||||||||| |||| || | |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  55080815 taagggtgtgtttggatggagggtttaggatgggaggacttacttttcttttttaaattacgaacattataaaataatttttagaaaatttaattaacaa 55080716  T
Q  239 catgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  55080715 catgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttcgtaatttacaaaataaaaatgaac 55080624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 144 - 346
Target Start/End: Complemental strand, 22186950 - 22186748
Alignment:
Q  144 gtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatga 243  Q
    ||||||||||||| ||||||||  | |||| || | |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22186950 gtgtgtttggatggagggtttaaaaggggaggactcacttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatga 22186851  T
Q  244 taaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctccctt 343  Q
    |||||||| ||| |||||||||||||||||| | ||||||| |||||||||||||| ||| | |||||||| ||| ||||| |||||  |||||||||||    
T  22186850 taaatgattatataatacttcaaaaacactttatttattttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactctgccctccctt 22186751  T
Q  344 ccc 346  Q
    |||    
T  22186750 ccc 22186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 141 - 324
Target Start/End: Complemental strand, 43961644 - 43961461
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaaca 240  Q
    |||||||||||||||| |||| ||| || |||| |  | | |||||||||||| |||| | |||||||||||| |||||||||||||| ||||| |||||    
T  43961644 agggtgtgtttggatggagggattatgaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaaca 43961545  T
Q  241 tgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||| |||||||||    
T  43961544 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataatttaaaaaataaaa 43961461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 324
Target Start/End: Original strand, 17182483 - 17182678
Alignment:
Q  131 aaattctttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttag--aaaatt 228  Q
    ||||| ||||| |||||||||||||  ||| ||||||| ||||||||| |||||||||||||| ||||  ||| ||||||||| |||||| |  ||||||    
T  17182483 aaattatttaaaggtgtgtttggatagaggttttaggaggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaatt 17182582  T
Q  229 taattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
     ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||| ||| |||||||||| |||||||||    
T  17182583 gaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaatattttaccttgttcgtaatttaaaaaataaaa 17182678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 187 - 347
Target Start/End: Original strand, 7977552 - 7977713
Alignment:
Q  187 ttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta-ttttg 285  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||      
T  7977552 ttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacaattaatttactttaa 7977651  T
Q  286 aaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    |||||||||||||||||  |||||||||| ||||||||| |||||  | |||||| ||||||    
T  7977652 aaaaaacattttacattcttcgtaatttaaaaaataaaattgaaccctcccctcctttcccc 7977713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 47846104 - 47846249
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||  |||||||||||||||||||||| |||||| |||||| |||||||||||| |||||| |||||||||||||||||||| ||    
T  47846104 acttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatgataaataatcatataatacttcaaaaacacttaattt 47846203  T
Q  280 atttt-gaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||  |||||||| ||||||||| || ||||||| |||||||||    
T  47846204 attttaaaaaaaacactttacattgttcataatttaaaaaataaaa 47846249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 54576376 - 54576528
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||||||||| ||| ||||||||||||||| |||| ||    
T  54576376 acttttcttttttagattacggacattataaaatgatttatagaaaattgaattaacaacgtgataaatgattatataatacttcaaaaacatttaattt 54576475  T
Q  280 attt--tgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||||    |||||||||||||| ||| |||||||||| ||| ||||| |||||    
T  54576476 atttaaaaaaaaaacattttacgttgttcgtaatttaaaaattaaaagtgaac 54576528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 182 - 330
Target Start/End: Original strand, 4437476 - 4437623
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||||||||||| |||| ||| |||||||||| ||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||| | ||||    
T  4437476 ttttcttttttaaattatggatattataaaatgatttttaaaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttgatttat 4437575  T
Q  282 tttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    |||  ||||||||||||||||| |  ||||||| |||||||||||||||    
T  4437576 ttt-taaaaacattttacattgtttttaatttaaaaaataaaaatgaac 4437623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 182 - 330
Target Start/End: Original strand, 29993822 - 29993970
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||| ||||||  |||    
T  29993822 ttttcttttttaaattacggacactataaaatgatttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaatacttaatctat 29993921  T
Q  282 tttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||| ||||||| |||||||||| |||||||||| ||| ||||| |||||    
T  29993922 tttaaaaaaactttttacattgttcgtaatttaaaaagtaaaagtgaac 29993970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 56135904 - 56135777
Alignment:
Q  217 ttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttaca 316  Q
    |||||||||||| ||||||||   ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| |    
T  56135904 ttttagaaaattgaattaaca---tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaa 56135808  T
Q  317 aaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||||||||||||  | |||||||||||||    
T  56135807 aaataaaaatgaaccctcccctcccttcccc 56135777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 34995244 - 34995102
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||| ||||| |||| |||||||||||||| ||||||  ||||||||||| ||| || |||||||||||||||||||| ||    
T  34995244 acttttcttttttaaattacggatattatcaaatgatttttagaaaattgaattaa--acatgataaataatcttataatacttcaaaaacacttaattt 34995147  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||  |||||||||| |||||| |||||||||| |||||||||    
T  34995146 attttagaaaaacatttcacattgttcgtaatttaaaaaataaaa 34995102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 37761658 - 37761510
Alignment:
Q  181 cttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta 280  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||| |||    
T  37761658 cttttcttttttaaattatggacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttcaaaaacacttaattta 37761559  T
Q  281 ttttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    || | |||||| ||||||  ||| |||||||||| ||| ||||| |||||    
T  37761558 ttct-aaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaac 37761510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 272
Target Start/End: Complemental strand, 11089760 - 11089619
Alignment:
Q  134 ttctttaagggtgtgtttggatgaagggtttaggaagggaagat---taacttttcttttttagattacggacattataaaataatttttagaaaattta 230  Q
    ||||||||||||||||||||||  ||| ||||| | ||||||||   | || ||||||||||| ||||||||| |||||||||| ||||||||||||| |    
T  11089760 ttctttaagggtgtgtttggattgaggatttagaaggggaagatggtttacatttcttttttaaattacggactttataaaatattttttagaaaattga 11089661  T
Q  231 attaacaacatgataaatgatcataaaatacttcaaaaacac 272  Q
    ||||||||||| ||||||||||||| | ||||||||||||||    
T  11089660 attaacaacatcataaatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 9030396 - 9030263
Alignment:
Q  195 attacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttatt-ttgaaaaaaca 293  Q
    ||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| ||| ||||||| |||||||||||| ||||| || ||||||||    
T  9030396 attacagacattataaaatgatttttagaaaatttaattaataaaatgataaatgattatataatactttaaaaacacttaatttattgtttaaaaaaca 9030297  T
Q  294 ttttacattgctcgtaatttacaaaataaaaatg 327  Q
    |||||| ||| |||||||||| ||| | ||||||    
T  9030296 ttttacgttgttcgtaatttaaaaatttaaaatg 9030263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 314
Target Start/End: Original strand, 54001155 - 54001287
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacac-ttaact 278  Q
    |||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||   ||||||||||||||||||| |||||||||||||||| || | |    
T  54001155 acttttgttttttaaattacggacattataaaataatttttaaaaaattgaatt---aacatgataaatgatcatataatacttcaaaaacacttttatt 54001251  T
Q  279 tattttgaaaaaacattttacattgctcgtaattta 314  Q
    |||||| |||| ||||||||||||| |||| |||||    
T  54001252 tattttaaaaagacattttacattgttcgtgattta 54001287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 330
Target Start/End: Complemental strand, 51329983 - 51329841
Alignment:
Q  187 ttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttga 286  Q
    ||||||| |||| ||| ||||||||||||||| ||||||||| ||||||||| |||||||||||| ||| ||||||||||||| |||||| ||||||| |    
T  51329983 ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatgataaatgattatataatacttcaaaaa-acttaatttattttaa 51329885  T
Q  287 aaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    |||||||||||   ||| |||||||||| ||| ||||| |||||    
T  51329884 aaaaacattttgtgttgttcgtaatttaaaaattaaaattgaac 51329841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 5825096 - 5825016
Alignment:
Q  175 gattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcata 255  Q
    |||| |||||||||||||  ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  5825096 gatttacttttcttttttgaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcata 5825016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 14539465 - 14539357
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||| |||| || |||||| ||||||||||||  || |||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||    
T  14539465 tttttttttataaattacgaacattataaaatgtttgttagaaaattaaattaagaacataataaatgatcatataatacttcaaaaacacttaatttat 14539366  T
Q  282 tttgaaaaa 290  Q
    ||| |||||    
T  14539365 tttaaaaaa 14539357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 303
Target Start/End: Complemental strand, 55510356 - 55510242
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaa 287  Q
    |||||| |||||| ||| ||||||||| |||| | |||||| || |||||||||||| |||||||||| |||||||||   |||||||| ||||||| ||    
T  55510356 tttttaaattacgaacactataaaata-ttttaaaaaaattgaaataacaacatgatgaatgatcatataatacttcagtcacacttaatttattttaaa 55510258  T
Q  288 aaaacattttacattg 303  Q
    ||||||||||||||||    
T  55510257 aaaacattttacattg 55510242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 294
Target Start/End: Original strand, 47433715 - 47433871
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaa-gattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaac 236  Q
    ||||||||| |||| |||| ||||||||||| ||||| | || | ||||| |||||| |||| |||||||||  |||  |||||| |||||| || |||     
T  47433715 ttaagggtgcgtttagatggagggtttaggaggggaagggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataat 47433814  T
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||| ||||| ||||||| ||||||||||  |||||||| ||||||| |||||||||    
T  47433815 aacat-ataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacat 47433871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 51075268 - 51075217
Alignment:
Q  204 attataaaataatttttagaaaatttaattaacaacatgataaatgatcata 255  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatgataaatgatcata 51075217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 21694939 - 21695040
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||||| ||||||||  ||||||  ||||| || |||||| ||||| |||||||||| ||||||||||  |||||||| ||    
T  21694939 acttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgat-aatgatcatataatacttcaatcacacttaattt 21695037  T
Q  280 att 282  Q
    |||    
T  21695038 att 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 35543315 - 35543411
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaa 235  Q
    |||| |||||||| |||| |||||||| |||||||  | | | |||||||||||| |||| | |||||||||||||||||||| |||||| ||||||    
T  35543315 taagagtgtgtttagatggagggtttaagaagggagaacttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 264
Target Start/End: Complemental strand, 44145968 - 44145842
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaaca 237  Q
    |||||||||| ||||||   ||||||||||| |||| |  | || || ||||||||  |||  ||||||||||||| ||||||| |||||| ||||||||    
T  44145968 ttaagggtgtatttggaaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 44145869  T
Q  238 acatgataaatgatcataaaatacttc 264  Q
     ||| ||||||||||||  ||||||||    
T  44145868 gcattataaatgatcatgtaatacttc 44145842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 27735883 - 27735826
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||||||||||||| ||||||||||  |||||||| ||||||| |||||||||    
T  27735883 aacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacat 27735826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 46007715 - 46007863
Alignment:
Q  147 tgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattat-aaaataatttttagaaaatttaat-taacaacatgat 244  Q
    |||||||||| ||||||||||| |||| | || ||||||| |||||| ||||| ||||| || |||||  |||||  |||| ||||  ||  ||||||||    
T  46007715 tgtttggatggagggtttaggaggggagggtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgat 46007814  T
Q  245 aaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaaca 293  Q
    ||||||||||| ||||||||||   ||||||| |||||||  |||||||    
T  46007815 aaatgatcatataatacttcaatctcacttaatttattttacaaaaaca 46007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 17938158 - 17938259
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    ||||| |||||| |||| |||||||||  |||  |||||| ||| || || ||| ||||||||||| ||||||| ||||||||||  |||||||| ||||    
T  17938158 ttttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttat 17938257  T
Q  282 tt 283  Q
    ||    
T  17938258 tt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 37711281 - 37711172
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgcc 336  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||||  | |||||| ||| || |  ||||||||| |||| |||||  |||  | ||    
T  37711281 aacatgataaatgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaaccctccc 37711182  T
Q  337 ctcccttccc 346  Q
    ||||||||||    
T  37711181 ctcccttccc 37711172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 47846369 - 47846456
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattt-tgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||||||| |||||| |||||||| |||| |||||| ||||||   |||||||| ||||||||| || ||||||| |||||||||    
T  47846369 aacatgataaataatcatataatacttc-aaaatacttaatttatttaaaaaaaaacactttacattgttcataatttaaaaaataaaa 47846456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 5730936 - 5730983
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttatttt 284  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  5730936 aacatgataaatgatcatataatacttcaattacacttaatttatttt 5730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 293
Target Start/End: Complemental strand, 45742136 - 45741972
Alignment:
Q  139 taagggtgtgtttggatgaagggtttagg-----aaggga----aga-ttaacttttcttttttagattacggacattataaaataatttttagaaaatt 228  Q
    |||||||||||||||||||||||||||||     ||||||    ||| || ||||||| |||||| |||||||||| ||| ||||  |||||| ||| ||    
T  45742136 taagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagtt 45742037  T
Q  229 taattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaaca 293  Q
     |  ||  ||||||||||| ||||||| ||||||||||  ||| |||| |||||||  |||||||    
T  45742036 aacatattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaaca 45741972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 5824998 - 5824948
Alignment:
Q  278 ttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatga 328  Q
    ||||||| || ||||||||||||||  |||||||||| |||||||||||||    
T  5824998 ttattttaaacaaacattttacatttttcgtaatttaaaaaataaaaatga 5824948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 35248824 - 35248742
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaa 319  Q
    |||||||||||| |||||| ||||||||||  |||||||| |||||||  |||||||| ||| || |  ||||||||| ||||    
T  35248824 aacatgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaa 35248742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 24565344 - 24565381
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaaga 176  Q
    |||||||||||||||||| | |||||||||||||||||    
T  24565344 taagggtgtgtttggatggaaggtttaggaagggaaga 24565381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 36151714 - 36151657
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||||| ||||||| ||||||||||  |||||||| |||||||  ||||||||    
T  36151714 aacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacat 36151657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 37711378 - 37711333
Alignment:
Q  130 caaattctttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||| |||| |||||||||||||||| ||||||||||| ||||||    
T  37711378 caaatccttttagggtgtgtttggatggagggtttaggaggggaag 37711333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 53260715 - 53260752
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  53260715 ttaagggtgtgtttggatggagggtttaggaggggaag 53260752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 54935204 - 54935119
Alignment:
Q  240 atgataaatgatcata-aaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||| ||||||| |||||||||||  |||||||| |||||||  |||||||| ||| || | |||||||||| |||| ||||    
T  54935204 atgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaa 54935119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 56135965 - 56135908
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagatta 198  Q
    |||||||||||||||| ||||||||||| |||| |  | |||||||||||||| ||||    
T  56135965 agggtgtgtttggatggagggtttaggaggggagggcttacttttcttttttaaatta 56135908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 37711132 - 37711172
Alignment:
Q  135 tctttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    |||||||||||||||||||||  ||||||||||| ||||||    
T  37711132 tctttaagggtgtgtttggattgagggtttaggaggggaag 37711172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 41174591 - 41174555
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  41174591 taagggtgtgtttggatggagggtttaggaggggaag 41174555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 47694490 - 47694458
Alignment:
Q  234 aacaacatgataaatgatcataaaatacttcaa 266  Q
    |||||||||||||||||||||| ||||||||||    
T  47694490 aacaacatgataaatgatcatataatacttcaa 47694458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 207 - 347
Target Start/End: Complemental strand, 43826500 - 43826360
Alignment:
Q  207 ataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctc 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttc 43826401  T
Q  307 gtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||||||||||||||||||||||  | |||||| ||||||    
T  43826400 gtaatttacaaaataaaaatgaactctcccctccattcccc 43826360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 12022192 - 12022336
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  12022192 acttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattt 12022291  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||    
T  12022292 attttaaaaaaacattttacattgtccgtaatttaaaaaataaaa 12022336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 8815190 - 8815363
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||| | ||    
T  8815190 acttttcttttttaaattacggacattataaaatgatttttagaaaattgaatcaacaacatgataaatgattatataatacttcaaaaacactttaatt 8815289  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttccccctcctaa 354  Q
      ||||||||||||||||||| || |||||||||| ||| ||||| |||||  | ||||||| ||||||||||||    
T  8815290 tatttgaaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccc-tccccctcctaa 8815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 20472741 - 20472885
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||| | ||    
T  20472741 acttttcttttttaaattacagacattataaaataaattttagaaaattgaattaacaatatgatatatgatcatataatacttcaaaaacacttgattt 20472840  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| ||||||||  |||||||| |||||||||| |||||||||    
T  20472841 atttttaaaaaacaacttacattgttcgtaatttaaaaaataaaa 20472885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 16024341 - 16024214
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaa 287  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||    
T  16024341 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaa 16024242  T
Q  288 aaaa-cattttacattgctcgtaattta 314  Q
    |||| ||||||| |||| ||||||||||    
T  16024241 aaaatcattttatattgttcgtaattta 16024214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 329
Target Start/End: Complemental strand, 9933475 - 9933286
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaaca 240  Q
    ||||| |||||||||| ||  ||||||| |||| | || |||||||||||||| | |  |||||||||||||| ||||| | |||||| |||||||||||    
T  9933475 agggtatgtttggatggagaatttaggaggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaaca 9933376  T
Q  241 tgataaatgatcataaaatacttcaaaaacacttaacttattttgaa-aaaacattttacattgctcgtaatttacaaaataaaaatgaa 329  Q
    ||||||||||||||| |||| |||||||| |||||| |||||||||| |||| ||||||||||| |||||||||| || |||||| ||||    
T  9933375 tgataaatgatcatataatatttcaaaaatacttaatttattttgaaaaaaatattttacattgttcgtaatttaaaatataaaagtgaa 9933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 189 - 330
Target Start/End: Original strand, 40633047 - 40633188
Alignment:
Q  189 ttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaa 288  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||| ||||||||||||||| ||||||| |||    
T  40633047 ttttaaattacggacattataaaataatttttagaaaattgaattaacaacatgataaatgattgtataatatttcaaaaacacttaatttattttaaaa 40633146  T
Q  289 aaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
     |||||||||| ||| |||||||| | ||| ||||| |||||    
T  40633147 caacattttacgttgttcgtaattgaaaaattaaaattgaac 40633188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 43732882 - 43732730
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  43732882 acttttcttttttaaattacggacattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaattt 43732783  T
Q  280 atttt--------gaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||         |||||||||||||||||| | |||||||| |||||||||    
T  43732782 attttttttaaaaaaaaaaacattttacattgttagtaatttaaaaaataaaa 43732730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 30365324 - 30365175
Alignment:
Q  181 cttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta 280  Q
    ||||||||||||| ||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||| |||    
T  30365324 cttttcttttttaaattacagacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttcaaaaacacttaattta 30365225  T
Q  281 ttttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    || | |||||| ||||||  ||| |||||||||| ||| ||||| |||||    
T  30365224 ttctaaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaac 30365175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 324
Target Start/End: Original strand, 8671849 - 8671987
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaa--tgatcataaaatacttcaaaaacacttaacttattttg 285  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||||||||| |||| |||  |||||||| ||||||||||||| |||||| |||||||     
T  8671849 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttta 8671948  T
Q  286 aaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||| ||||||||||||  | |||||||| |||||||||    
T  8671949 aaaatacattttacattatttgtaatttaaaaaataaaa 8671987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 39449474 - 39449355
Alignment:
Q  205 ttataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgc 304  Q
    ||||||||| ||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||| |||| |||| || |||| |||||| ||||||     
T  39449474 ttataaaattatttttaaaaaattgaattaacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgt 39449375  T
Q  305 tcgtaatttacaaaataaaa 324  Q
    |||||||||| |||||||||    
T  39449374 tcgtaatttaaaaaataaaa 39449355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 330
Target Start/End: Original strand, 9434362 - 9434499
Alignment:
Q  195 attacggacattataaaa-taatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttatt-ttgaaaaaac 292  Q
    |||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||| ||||||| |||||    |||||||    
T  9434362 attacggatattataaaaataatttttaaaaaattgaattaacaacatgataaatgataatataatacttcaaaaccacttaatttattaaaaaaaaaac 9434461  T
Q  293 attttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||||||||||| || ||||||| ||||||||| |||||    
T  9434462 attttacattgttcctaatttaaaaaataaaagtgaac 9434499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 6453378 - 6453239
Alignment:
Q  181 cttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta 280  Q
    |||||| |||||| |||||   ||||||||||| |||||||||||||| |||||| |||||||||| | |||||| ||||||||||||||||||||  ||    
T  6453378 cttttcctttttaaattacaatcattataaaatgatttttagaaaattgaattaataacatgataagtaatcatataatacttcaaaaacacttaatata 6453279  T
Q  281 tttt-gaaaaaacattttacattgctcgtaatttacaaaa 319  Q
    ||||  |||||| ||||||||||  |||||||||| ||||    
T  6453278 ttttaaaaaaaatattttacattattcgtaatttaaaaaa 6453239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 29937697 - 29937614
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatactt 263  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  29937697 acttttctttttaaaattatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt 29937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 34196496 - 34196409
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacactta 275  Q
    |||||| ||||| ||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  34196496 tttttaaattacagacattataaaatgatttttagaaaattgaattaacaacaagataaacgatcatataatacttcaaaaacactta 34196409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 29358345 - 29358490
Alignment:
Q  136 ctttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaa 235  Q
    |||| ||| |||||||||||| ||||||||||| | |||| || ||||||  |||||| |||||||||| ||||||||| |||||| |||||| |  ||     
T  29358345 cttttaggttgtgtttggatggagggtttaggaggagaaggtttactttttatttttaaattacggacactataaaatatttttta-aaaattaacatat 29358443  T
Q  236 caacatgataaatgatcataaaatacttcaaaaacacttaacttatt 282  Q
     ||||| ||||| |||| || ||||||||||  |||||||| |||||    
T  29358444 taacattataaacgatcctataatacttcaatcacacttaatttatt 29358490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 346
Target Start/End: Original strand, 1026863 - 1027063
Alignment:
Q  145 tgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgat 244  Q
    |||||||||||| ||||||||||| |||| | || ||||||| |||||| ||| |||||| ||| ||||| ||| |  ||| || |  ||  ||||||||    
T  1026863 tgtgtttggatggagggtttaggaggggagggtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgat 1026962  T
Q  245 aaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttc 344  Q
    ||| ||||||| ||||||||||  | |||||| |||||||  ||||||| |||| || |  ||||||||| |||| |||| |||||  | ||||||||||    
T  1026963 aaacgatcatataatacttcaatcatacttaatttattttagaaaaaca-tttatatagtccgtaatttaaaaaagaaaagtgaacccttccctcccttc 1027061  T
Q  345 cc 346  Q
    ||    
T  1027062 cc 1027063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 27487131 - 27487067
Alignment:
Q  234 aacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 298  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |  ||||  ||||||||||||    
T  27487131 aacaacatgataaatgatcatataatacttcaataacacttaattggttttagaaaaacatttta 27487067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 329
Target Start/End: Original strand, 38021409 - 38021531
Alignment:
Q  202 acattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaa-acacttaacttattttgaaa-aaacattttac 299  Q
    |||||||||||||||||||  |||||| ||||||       ||||||||||||| |||||||||||| | |||||| ||||||| ||| | | |||||||    
T  38021409 acattataaaataattttttaaaaattgaattaa-------ataaatgatcatataatacttcaaaataaacttaatttattttaaaatatatattttac 38021501  T
Q  300 attgctcgtaatttacaaaataaaaatgaa 329  Q
    |||  || ||||||| ||||||||||||||    
T  38021502 attattcctaatttaaaaaataaaaatgaa 38021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 41103612 - 41103699
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||||| ||||||| ||||||||||  |||||||| |||||||  |||||||| ||| || ||| |||||||| |||| ||||    
T  41103612 aacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaa 41103699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 7394616 - 7394677
Alignment:
Q  286 aaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||||| |||| ||||| |||||||||| ||||||||| ||||| || |||||||||||||    
T  7394616 aaaaaacgttttgcattgttcgtaatttaaaaaataaaagtgaaccatcccctcccttcccc 7394677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 24243084 - 24243206
Alignment:
Q  166 ggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttca 265  Q
    |||||||| || | ||||||| |||| | |||||| ||| ||||||||   ||||| |||||| || ||| ||||||||||||||||||| |||||||||    
T  24243084 ggaagggatgacttacttttcattttgaaattacg-acactataaaatgtctttta-aaaattgaaataataacatgataaatgatcatataatacttca 24243181  T
Q  266 aaaacacttaacttattttgaaaaaa 291  Q
    |  |||||||| ||| ||||||||||    
T  24243182 atcacacttaa-ttaatttgaaaaaa 24243206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 1027094 - 1027058
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1027094 taagggtgtgtttggattaagggtttaggaagggaag 1027058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 9718486 - 9718614
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaaca 237  Q
    ||||||||||||||||||| ||||||||||| |||| | ||   ||||| |||||| |||||||||| ||| ||||  |||||| ||| ||    ||  |    
T  9718486 ttaagggtgtgtttggatggagggtttaggaggggagggttcgattttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatatta 9718585  T
Q  238 acatgataaatgatcataaaatacttcaa 266  Q
    ||||||||||  |||||| ||||||||||    
T  9718586 acatgataaacaatcatataatacttcaa 9718614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 27483701 - 27483637
Alignment:
Q  234 aacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 298  Q
    |||| |||||||||| |||||| |||||||||| ||||||| | ||||||  |||||||||||||    
T  27483701 aacagcatgataaattatcatataatacttcaataacactttatttatttaaaaaaaacatttta 27483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 31738615 - 31738516
Alignment:
Q  183 tttcttttttagattacggacattataaaataatttttagaaaatttaat-taacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||| |||||| |||||||||| ||||||||| ||||| ||| | ||||  ||  ||||||||||||||||||| ||||||||||  |||||||| ||||    
T  31738615 tttcatttttaaattacggacactataaaatatttttt-gaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttat 31738517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 38198141 - 38198208
Alignment:
Q  223 aaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaa 290  Q
    |||||| || ||||||||||||| ||||||||| ||||||||||  |||||||| | ||||| |||||    
T  38198141 aaaattgaaataacaacatgatatatgatcatataatacttcaatcacacttaattcattttaaaaaa 38198208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 22591501 - 22591543
Alignment:
Q  224 aaatttaattaacaacatgataaatgatcataaaatacttcaa 266  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||    
T  22591501 aaattgaatgaacaacatgataaatgatcatataatacttcaa 22591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 30581914 - 30581955
Alignment:
Q  235 acaacatgataaatgatcataaaatacttcaaaaacacttaa 276  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  30581914 acaacatgataaatgatcatataatacttcaatcacacttaa 30581955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 41103502 - 41103539
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaaga 176  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  41103502 taagggtgtgtttggatggagggtttaggaggggaaga 41103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 26167894 - 26167842
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaa 289  Q
    ||||||||||||||||||| |||||||||| ||| ||| | ||||||| ||||    
T  26167894 aacatgataaatgatcatataatacttcaataactctttatttattttaaaaa 26167842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 142 - 324
Target Start/End: Complemental strand, 40858798 - 40858616
Alignment:
Q  142 gggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacat 241  Q
    ||||||||||||||| ||||||||||| |||| | || | |||||||||||| ||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  40858798 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacat 40858699  T
Q  242 gataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||||||||| ||||||||||||||||| || ||||||| |||||||||||||||||| |||||||||| |||||||||    
T  40858698 gataaatgatcatataatacttcaaaaacactaaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaa 40858616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 26135992 - 26135848
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| || ||| |||||||||||||||||||| ||    
T  26135992 acttttcttttttaaattacggacattataaaataattttttgaaaattgaattaacaatatgataaataattatataatacttcaaaaacacttaattt 26135893  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| |||||||||||||||||| || ||||||| |||||||||    
T  26135892 atttttaaaaaacattttacattgttcataatttaaaaaataaaa 26135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 34641185 - 34641043
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  34641185 acttttcttttttaaattacggacattataaaatgattt--agaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattt 34641088  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| ||||| | |||||||||| |||||||||| |||||||||    
T  34641087 attttaaaaaatccttttacattgttcgtaatttaaaaaataaaa 34641043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 141 - 324
Target Start/End: Complemental strand, 48683848 - 48683663
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaactttt-cttttttagattacggacattataaaataatttttagaaaatttaattaacaac 239  Q
    |||||||||||||||  ||||||||||| |||| | || | |||| |||||||| |||||| |||||||||||| |||||||| ||||| ||||||||||    
T  48683848 agggtgtgtttggatagagggtttaggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaac 48683749  T
Q  240 at-gataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    || |||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||  ||||||||    
T  48683748 attgataaatgatcatataatatttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaagaaataaaa 48683663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 347
Target Start/End: Original strand, 17474255 - 17474422
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||| ||||||||| |||| | |||||||||||||||||||| ||    
T  17474255 acttttcttttttaaattacggacattataaaataattttttaaaaattgaattaacaatatgataaataatcaaataatacttcaaaaacacttaattt 17474354  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||| |||||| ||||||||||  |||||||||| ||||||||| | |||  | |||||||||||||    
T  17474355 atttttaaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccc 17474422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 175 - 331
Target Start/End: Complemental strand, 24253922 - 24253766
Alignment:
Q  175 gattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacactt 274  Q
    |||| |||||||||||||| ||||||||||||||||||| | ||||||||| || |||||||||||||||||||||| ||| || |||||||||||||||    
T  24253922 gatttacttttcttttttaaattacggacattataaaatgagttttagaaagttgaattaacaacatgataaatgattatataacacttcaaaaacactt 24253823  T
Q  275 aacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaaca 331  Q
    || ||||||| |||||  |||||||||||||| ||||||| ||| ||||| ||||||    
T  24253822 aatttattttaaaaaattattttacattgctcataatttaaaaattaaaagtgaaca 24253766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 141 - 324
Target Start/End: Complemental strand, 41414313 - 41414129
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttctttttt-agattacggacattataaaataatttttagaaaatttaattaacaac 239  Q
    ||||||||||||||||  |||||||||| ||||   || ||||||||||||| | || | |||||||||||||| |||||||||||||| | ||||||||    
T  41414313 agggtgtgtttggatggtgggtttaggaggggagtgtttacttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaac 41414214  T
Q  240 atgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||||||||||| |||||||||||||| ||| | ||||||| |||||||||||||| ||| || ||||||| |||||||||    
T  41414213 atgataaatgatcatataatacttcaaaaacgcttgatttattttaaaaaaacattttaccttgttcataatttaaaaaataaaa 41414129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 42772266 - 42772123
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaaca 240  Q
    |||||||||||| ||| ||||||||||| |||||| || ||||| ||| || | ||||||||||||||||||| |||||| ||||||| |||||||||||    
T  42772266 agggtgtgtttgaatggagggtttaggaggggaaggtttactttgcttcttaaaattacggacattataaaatgattttttgaaaattgaattaacaaca 42772167  T
Q  241 tgataaatgatcataaaatacttcaaaaacacttaacttatttt 284  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  42772166 tgataaatgatcatataatacttcaaaaacacttaatttatttt 42772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 172 - 330
Target Start/End: Original strand, 10943655 - 10943813
Alignment:
Q  172 gaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaaca 271  Q
    ||||||| | |||||||||||| ||||  || |||||||||| |||||||||||||| |||||||||||| |||||| || ||| |||||||||||||||    
T  10943655 gaagatttaattttcttttttaaattatagatattataaaatgatttttagaaaattgaattaacaacataataaataattatataatacttcaaaaaca 10943754  T
Q  272 cttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||||| ||||||| |||||||||||| ||||| |||||||||| ||| ||||| |||||    
T  10943755 cttaatttattttaaaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaac 10943813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 44412556 - 44412412
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||| ||||||| |||||| ||| | |||||| |||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||    
T  44412556 acttttattttttaaattacgaacaatgtaaaatgattttttgaaaattgaattaacaacatgataaatcatcatataatacttcaaaaacacttaattt 44412457  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaa 325  Q
    ||||| ||||||  |||||||||| |||||||||| ||||||||||    
T  44412456 attttaaaaaaatgttttacattgttcgtaattta-aaaataaaaa 44412412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 42699669 - 42699795
Alignment:
Q  188 tttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaa 287  Q
    |||||| |||| |||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||  |    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatgataaatgatcatataatacttcaaaaacacttaatttatttttta 42699768  T
Q  288 aaaacattttacattgctcgtaattta 314  Q
    |||| |||||| |||| ||||||||||    
T  42699769 aaaatattttatattgttcgtaattta 42699795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 21090129 - 21090264
Alignment:
Q  189 ttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaa 288  Q
    ||||| ||||| || |||||||||  |||||| ||||||| |||||||||||||||| || |||||| |||||||||||||||||||| ||||||| |||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatatattatcatataatacttcaaaaacacttaatttattttaaaa 21090228  T
Q  289 aaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||| ||||||||||| || ||||||| |||||||||    
T  21090229 aaatattttacattgttcataatttaaaaaataaaa 21090264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 208 - 330
Target Start/End: Complemental strand, 46978594 - 46978472
Alignment:
Q  208 taaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcg 307  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||| |||||||||||||||  | |||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgataaatgattatataatacttcaaaaacatttaatttattttaaaaaaacattttacaccgttcg 46978495  T
Q  308 taatttacaaaataaaaatgaac 330  Q
    ||||||| ||| ||||| |||||    
T  46978494 taatttaaaaattaaaagtgaac 46978472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 18086029 - 18086133
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgat-aaatgatcataaaatacttcaaaaacacttaact 278  Q
    |||||||||||||| ||||| |||||||||||||  ||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |    
T  18086029 acttttcttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataataaaatgatcataaaatacttcaaaaacacttaatt 18086128  T
Q  279 tattt 283  Q
    |||||    
T  18086129 tattt 18086133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 195 - 330
Target Start/End: Original strand, 8432323 - 8432458
Alignment:
Q  195 attacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||| ||  || |||||||||||||||||||| | ||||| |||||||||    
T  8432323 attacagacattataaaatgatttttacaaaattgaattaacaacatgataaataattttataatacttcaaaaacacttaattcattttaaaaaaacat 8432422  T
Q  295 tttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||| ||||| ||||| |||| ||| ||||| |||||    
T  8432423 ttttcattgttcgtagtttaaaaattaaaattgaac 8432458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 324
Target Start/End: Original strand, 16884047 - 16884164
Alignment:
Q  206 tataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgct 305  Q
    ||||||| || ||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||| |    
T  16884047 tataaaaaaaattttaaaaaattgaat-aacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaagacattttacattgtt 16884145  T
Q  306 cgtaatttacaaaataaaa 324  Q
    ||||| ||| |||||||||    
T  16884146 cgtaacttaaaaaataaaa 16884164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 36727362 - 36727249
Alignment:
Q  189 ttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaa 288  Q
    ||||| |||||| |||||||||||||||||| |||||||| | ||||||||||||||||| |||||| |||||||||||||||||| | ||||||| |||    
T  36727362 ttttaaattacgaacattataaaataattttaagaaaattaacttaacaacatgataaattatcatataatacttcaaaaacactt-atttattttaaaa 36727264  T
Q  289 aaacattttacattg 303  Q
     ||||||||||||||    
T  36727263 gaacattttacattg 36727249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 27197734 - 27197842
Alignment:
Q  216 tttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttac 315  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||| ||| | |||||| ||||||| |||||| || |||||||| ||||||||||     
T  27197734 tttttagaaaattgaattaacaacatgatagatgatcatataatactttaaatatacttaatttattttaaaaaaatatgttacattgttcgtaatttaa 27197833  T
Q  316 aaaataaaa 324  Q
    |||||||||    
T  27197834 aaaataaaa 27197842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 325
Target Start/End: Original strand, 54985744 - 54985899
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgata-------aatgatcataaaatacttc-----aaaaa 269  Q
    ||||| |||||| ||||||||||||||||| | |||||||||||||| ||||||||| ||||||       |||||||||| ||||||||     |||||    
T  54985744 ttttcgtttttaaattacggacattataaattgatttttagaaaattgaattaacaatatgataaatgaataatgatcatataatacttcaaaaaaaaaa 54985843  T
Q  270 cacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaa 325  Q
    ||||||| ||||||||||| |||||||||||||  | |||||||| ||||| ||||    
T  54985844 cacttaatttattttgaaagaacattttacattagttgtaatttaaaaaattaaaa 54985899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 55428584 - 55428492
Alignment:
Q  170 gggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatact 262  Q
    |||| |||| ||||||||| |||| ||||||||||||| || || |||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  55428584 gggatgatttacttttcttctttaaattacggacattacaagatgatttttagaaaattgaattaacaacgtgataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 37102156 - 37102337
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaaca 237  Q
    ||||||||||||||||||| ||||||||||| |||| | || | ||||| |||||| |||||||||| ||| ||||  |||||| ||| || |  ||  |    
T  37102156 ttaagggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatatta 37102255  T
Q  238 acatgataaatgatcataaaatacttcaaaaacacttaacttatttt-gaaaaaacattttacattgctcgtaatttacaaaa 319  Q
    |||| || || ||||||| ||||||||||  |||||| | ||||||| |||||||||| ||| || |  ||||||||| ||||    
T  37102256 acataat-aacgatcatataatacttcaaccacacttgatttattttagaaaaaacatgttatatagtccgtaatttaaaaaa 37102337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 45663211 - 45663337
Alignment:
Q  197 tacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattt 296  Q
    |||| ||| ||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||||||  |||  ||| ||||||| |||||| ||||    
T  45663211 tacgaacactataaaatatttttt-gaaaattgaaataacaacatgataaatgatcttataatacttcaatcacatataatttatttt-aaaaaatattt 45663308  T
Q  297 tacattgctcgtaatttacaaaataaaaa 325  Q
    || ||||  ||||||| | |||| |||||    
T  45663309 tatattgtccgtaattgaaaaaaaaaaaa 45663337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 324
Target Start/End: Complemental strand, 21774016 - 21773833
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaaca 240  Q
    |||||||||||||||||||||||||||| |||| | || ||||||  |||||| |||||| ||| ||  ||||  |||||| ||| || |  ||   |||    
T  21774016 agggtgtgtttggatgaagggtttaggaggggagggtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttaca 21773917  T
Q  241 tgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||  |||||| ||| ||||||  |||||||| |||||||  |||||||| ||| || |  ||||||||| |||| ||||    
T  21773916 tgataaacaatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttagaaaagaaaa 21773833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 347
Target Start/End: Complemental strand, 24560412 - 24560245
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| ||||| |||| ||| ||||  |||||| ||| || |  ||  ||||||||||| ||||||| ||||||||||  ||| |||| ||    
T  24560412 acttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaattt 24560313  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    |||||  |||||||| |||||| |  ||||||||| |||| |||||  |||  | |||||||||||||    
T  24560312 attttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccc 24560245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 37102383 - 37102321
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggac 203  Q
    |||||||||||||||  ||||||||||| |||||| || |||| ||||||||| |||||||||    
T  37102383 agggtgtgtttggattgagggtttaggaggggaaggtttacttatcttttttaaattacggac 37102321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 30200098 - 30200187
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaattta 230  Q
    |||||||||||||||| ||||||||||| |||| | || | ||||| |||||| |||||||||| ||| ||||  |||||| ||| ||||    
T  30200098 agggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttta 30200187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 220405 - 220479
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaat 213  Q
    |||||||||| |||||||| |||||||||| |||| || || | ||||| |||||| |||||||||||||| ||||    
T  220405 ttaagggtgtatttggatggagggtttagg-aggggaggtttagttttcatttttaaattacggacattatgaaat 220479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 18654706 - 18654753
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttatttt 284  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  18654706 aacatgataaatgatcatataatacttcaattacacttaatttatttt 18654753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 41110370 - 41110484
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| |||||||||| ||| ||||| ||| || ||| || |  ||  |||||||||||  |||||| ||||||||||  |||||||| ||    
T  41110370 acttttcatttttaaattacggacactatgaaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaattt 41110469  T
Q  280 attttgaaaaaacat 294  Q
    |||||  ||||||||    
T  41110470 attttcgaaaaacat 41110484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 24560215 - 24560251
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  24560215 taagggtgtgtttggattaagggtttaggaggggaag 24560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 34641236 - 34641200
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  34641236 taagggtgtgtttggatggagggtttaggaggggaag 34641200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 46205017 - 46204937
Alignment:
Q  244 taaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||||||| ||||||||||  |||||||| |||||||  |||||||| ||| || | || ||||||| |||| ||||    
T  46205017 taaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaa 46204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 9e-55; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 141 - 328
Target Start/End: Original strand, 40305670 - 40305862
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagat-----taacttttcttttttagattacggacattataaaataatttttagaaaatttaattaa 235  Q
    |||||||||||||||| ||||||||||| ||||||       | | |||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggagggcttagttttcttttttaaattacagacattataaaataatttttagaaaattgaattaa 40305769  T
Q  236 caacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatga 328  Q
    ||| |||||||||||||||| | |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  40305770 caatatgataaatgatcatatagtacttcaaaaacccttaatttattttgaaaaaacattttacattggtcgtaatttaaaaaataaaaatga 40305862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 347
Target Start/End: Complemental strand, 34981005 - 34980838
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||| |||||||||||||| |||| ||||||||| | |||||||||||||||||||| ||| |||||||||||||||||||| ||    
T  34981005 acttttcttttttaaattatggacattataaaatgatttatagaaaattgagttaacaacatgataaatgattatataatacttcaaaaacacttaattt 34980906  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||| |||||| ||||||| ||| |||||||||| ||| ||||| |||||  | |||||||||||||    
T  34980905 attttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacccttccctcccttcccc 34980838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 347
Target Start/End: Complemental strand, 10043447 - 10043280
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||| | |||||||||| |||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||| ||    
T  10043447 acttttcttttttaaattacgaatattataaaatgatttttagaaaattgaattaacaacattataaataatcatataatacttcaaaaacacttaattt 10043348  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
     |||| ||| || ||||||||||| |||||||||| ||||||||| |||   || |||||||||||||    
T  10043347 cttttaaaacaatattttacattgttcgtaatttaaaaaataaaagtgagtcatcccctcccttcccc 10043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 178 - 324
Target Start/End: Complemental strand, 21581145 - 21580998
Alignment:
Q  178 taacttttctttttt-agattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaa 276  Q
    ||||||||||||||| | |||| |||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||  |||||||||||||||||||    
T  21581145 taacttttctttttttaaattatggacgttatgaaataatttttagaaaattgaattaacaacatgataaatgttcatatgatacttcaaaaacacttaa 21581046  T
Q  277 cttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
     ||||||| |||||| ||||||||||| |||||||||| |||||||||    
T  21581045 tttattttaaaaaaatattttacattgttcgtaatttagaaaataaaa 21580998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 33744242 - 33744386
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| | | |||||||||||||||| ||    
T  33744242 acttttcttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatatatttcttcaaaaacacttaattt 33744341  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| ||||||||||||  |||| |||||||||| || ||||||    
T  33744342 attttaaaaaaacattttgaattgttcgtaatttaaaatataaaa 33744386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 201 - 324
Target Start/End: Original strand, 8551488 - 8551611
Alignment:
Q  201 gacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttaca 300  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||| |||| ||||||||||    
T  8551488 gacattataaaatgatttttaaaaaattaaattaacaacattataaatgatcatataatactttaaaaacacttaatttatttttaaaacacattttaca 8551587  T
Q  301 ttgctcgtaatttacaaaataaaa 324  Q
    |||||||||||||| |||||||||    
T  8551588 ttgctcgtaatttaaaaaataaaa 8551611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 10204771 - 10204627
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||||||||||  |||| ||||||| ||||| ||||||| |||||| |||||||||| | ||||||||||||| |||||||||||||||||||| ||    
T  10204771 acttttcttttttaatttacagacattaaaaaatgatttttaaaaaattgaattaacaacgtaataaatgatcatataatacttcaaaaacacttaattt 10204672  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| |||| ||||||||||||| | |||||||| |||||||||    
T  10204671 attttaaaaagacattttacattgttggtaatttaaaaaataaaa 10204627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 324
Target Start/End: Original strand, 15986675 - 15986817
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    ||||||||||||  |||| ||||||||||||| | ||||| |||||| ||||||||||||   ||||||||||| ||||||| |||||||||||| ||||    
T  15986675 ttttcttttttaatttacagacattataaaatgacttttaaaaaattgaattaacaacatttaaaatgatcatataatactttaaaaacacttaatttat 15986774  T
Q  282 tttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||| |||| ||||||||||||| |||||||||| |||||||||    
T  15986775 tttaaaaagacattttacattgttcgtaatttaaaaaataaaa 15986817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 5688572 - 5688458
Alignment:
Q  216 tttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttac 315  Q
    ||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||     
T  5688572 tttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaa 5688473  T
Q  316 aaaataaaaatgaac 330  Q
    ||||||||| |||||    
T  5688472 aaaataaaagtgaac 5688458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 328
Target Start/End: Original strand, 6597839 - 6597979
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||||||| |||||| |||||| ||||||| || ||||||||||||||||||||||| |||||       |||||||| ||    
T  6597839 acttttcttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatgataaatgatcatataatac-------acacttaattt 6597931  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatga 328  Q
    ||||| |||||| ||||||||||  || ||||||| |||||||||||||    
T  6597932 atttt-aaaaaatattttacattattcataatttaaaaaataaaaatga 6597979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 6382522 - 6382419
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||||||| ||  ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||   |||||||||||| |||||| ||    
T  6382522 acttttcttttctaatttacggacattataaaatactttttagaaaattgaattaacaacatgataaatgttcatgtgatacttcaaaaagacttaattt 6382423  T
Q  280 attt 283  Q
    ||||    
T  6382422 attt 6382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 12035987 - 12036087
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||||||||||| |||| | |||||||||||| ||| |||||||||| ||||| ||||||||||||| |||||| ||||||| |||||||||||| ||||    
T  12035987 ttttcttttttaaattatgaacattataaaattattattagaaaattgaatta-caacatgataaattatcatataatacttaaaaaacacttaatttat 12036085  T
Q  282 tt 283  Q
    ||    
T  12036086 tt 12036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 10043058 - 10043154
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaa 276  Q
    |||||||||| ||| ||||   |||||| | ||| |||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  10043058 acttttctttcttaaattataaacattaaagaattatttctagaaaattgaattaacaacatgataaatgatcatataatactttaaaaacacttaa 10043154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 28279525 - 28279640
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| |||| ||||||||| ||||  |||||| ||| || |  ||  ||||||||||||||||||| ||||||||||  |||||||  ||    
T  28279525 acttttcatttttaaattatggacattatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagttt 28279624  T
Q  280 atttt-gaaaaaacat 294  Q
    ||||| ||||||||||    
T  28279625 attttagaaaaaacat 28279640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 42681619 - 42681534
Alignment:
Q  209 aaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    |||||| |||||| |||||| || ||| ||||||||||||||||||| ||||||| ||  ||||| || |||||||  ||||||||    
T  42681619 aaaatattttttaaaaaattaaaataataacatgataaatgatcatataatactttaatcacactaaaattattttagaaaaacat 42681534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 325
Target Start/End: Complemental strand, 11757015 - 11756927
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaa 325  Q
    ||||| ||||||||||||| ||||||| ||  |||||||| |||||||  | |||||| ||| || | |||||||||| ||||||||||    
T  11757015 aacatcataaatgatcatataatactttaatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaaataaaaa 11756927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 4373672 - 4373727
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaac 292  Q
    ||||||||||||||||||| |||| |||||  |||||||| ||||||| |||||||    
T  4373672 aacatgataaatgatcatataatatttcaatcacacttaatttatttttaaaaaac 4373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 22023603 - 22023542
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacgga 202  Q
    |||||||||||||||| ||||||||||| |||| | || ||||||| ||| || ||||||||    
T  22023603 agggtgtgtttggatggagggtttaggaggggagggtttacttttcatttataaattacgga 22023542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 2183999 - 2183943
Alignment:
Q  190 tttagattacggacattataaaataatttttagaaaatttaattaacaacatgataa 246  Q
    |||| |||||||||||||||||||  | |||| |||||| || ||||||||||||||    
T  2183999 tttaaattacggacattataaaatgttatttaaaaaattgaaataacaacatgataa 2183943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 7544134 - 7544170
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    |||||||||||||||||  ||||||||||||||||||    
T  7544134 taagggtgtgtttggattgagggtttaggaagggaag 7544170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 29002220 - 29002288
Alignment:
Q  145 tgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaat 213  Q
    |||||||||||| ||||||||||| |||| | || ||||||| |||||| |||| | ||| ||||||||    
T  29002220 tgtgtttggatggagggtttaggaggggagggtttacttttcatttttaaattatgaacactataaaat 29002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 347
Target Start/End: Complemental strand, 33519243 - 33519076
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||||| |||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  33519243 acttttcttctttaaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattt 33519144  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||  ||||||||||||| |||| |||||||||| ||||||||| ||| |  | |||||||||||||    
T  33519143 atttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccc 33519076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 180 - 326
Target Start/End: Complemental strand, 35422159 - 35422013
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||||| ||    
T  35422159 acttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacataataaataatcatatgatacttcaaaaacacttaattt 35422060  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaat 326  Q
    ||||| |||||||||||||||||| | |||||||| |||||||||||    
T  35422059 attttaaaaaaacattttacattgtttgtaatttaaaaaataaaaat 35422013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 135 - 347
Target Start/End: Complemental strand, 48013743 - 48013531
Alignment:
Q  135 tctttaagggtgtgtttggatgaagggtttaggaaggga-agattaacttttcttttttagattacggacattataaaataatttttagaaaatttaatt 233  Q
    |||||||||||||||||||||| |||| |||||| |||| || ||| |||||| |||||| || || ||| |||||||||||||||||||||||| ||||    
T  48013743 tctttaagggtgtgtttggatggagggattaggaggggagagctta-cttttcgtttttaaatcacagactttataaaataatttttagaaaattgaatt 48013645  T
Q  234 aacaacatgataaatgatcata-aaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaa 332  Q
    ||||||||||||||||||||||  |||  ||||||||||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||  ||||      
T  48013644 aacaacatgataaatgatcatatgaatttttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattta-aaaataaaagcgaacgc 48013546  T
Q  333 tgccctcccttcccc 347  Q
    | |||||||||||||    
T  48013545 tcccctcccttcccc 48013531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 182 - 347
Target Start/End: Original strand, 36267604 - 36267769
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||   |||    
T  36267604 ttttcttttttaaattacggatattataaaatgatttttagaaaattgaatcaacaatatgataaatgatcatataatacttcaaaaacacttactatat 36267703  T
Q  282 tttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| |  | |||||||||||||    
T  36267704 tttgaaaaaacattttacattggttgtaatttaaaaaataaaaatgagccctcccctcccttcccc 36267769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 324
Target Start/End: Complemental strand, 39646699 - 39646520
Alignment:
Q  145 tgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgat 244  Q
    |||||||||||  ||||||||||| |||| || | |||||| ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  39646699 tgtgtttggattgagggtttaggaggggatgactcacttttattttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgat 39646600  T
Q  245 aaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
      ||||| ||| ||||||||||||||| |||| ||||||| |||| | ||||||||||| || ||||||| |||||||||    
T  39646599 tgatgatgatataatacttcaaaaacagttaatttattttaaaaatatattttacattgttcataatttaaaaaataaaa 39646520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 144 - 330
Target Start/End: Complemental strand, 21857577 - 21857392
Alignment:
Q  144 gtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatga 243  Q
    ||||||||| ||| || |||||||| | || || | |||||||| ||||| |||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  21857577 gtgtgtttgaatggagtgtttaggaggagaggacttacttttctctttta-attacgaacattataaaatgatttttagaaaattgaattaacaacatga 21857479  T
Q  244 taaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    |||||||||||| |||| ||||||||||||||| ||||||| |||||  |||||| |||| || ||||||| |||||||||||||||    
T  21857478 taaatgatcatacaatatttcaaaaacacttaatttattttaaaaaaggattttatattgttcttaatttaaaaaataaaaatgaac 21857392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 37926034 - 37925869
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    ||||||||| || ||||||||||||||||||| || ||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||||||  |||    
T  37926034 ttttcttttctaaattacggacattataaaatgatgtttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctat 37925935  T
Q  282 tttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||  |||||||||||||||||| |||||||||| ||||||||| |||||  | |||||||||||||    
T  37925934 ttaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccc 37925869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 180 - 330
Target Start/End: Original strand, 48881607 - 48881758
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| ||||||||| |||||| ||    
T  48881607 acttttcttttttaaattacggacattataaaataattttcagaaaattgaattaacaacatgataaatgattatataatgcttcaaaaatacttaattt 48881706  T
Q  280 a-ttttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    | |||| |||||||||||||| ||| | |||||||| ||| ||||| |||||    
T  48881707 atttttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaac 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 28074152 - 28074283
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||    
T  28074152 acttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacctgataaatgatcatataatacttcaaaaacacttaattt 28074251  T
Q  280 attt---tgaaaaaacattttacattgctcgt 308  Q
    ||||     |||||||||||||||||| ||||    
T  28074252 atttaaaacaaaaaacattttacattgttcgt 28074283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 37620968 - 37620802
Alignment:
Q  181 cttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta 280  Q
    ||||||||||||| |||| |||||||||||||| |||||| ||||||| ||||| |||||||||||| ||| ||| ||||||||||||||| |||| |||    
T  37620968 cttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatcaacatgataaaagattatataatacttcaaaaacatttaattta 37620869  T
Q  281 ttttgaaaaaacattttacattgctcgtaatttacaaaataaaaa-tgaacaatgccctcccttcccc 347  Q
    |||| ||||| |||||||||||| || ||||||  |||||||||| |||||  | |||||||||||||    
T  37620868 ttttaaaaaatcattttacattgttcataatttg-aaaataaaaagtgaactctcccctcccttcccc 37620802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 325
Target Start/End: Original strand, 31364094 - 31364234
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||||||| || ||||||||||||||||||| ||||| |||||||| ||| ||| ||||   ||||||||||| ||||||||||||||||  |||||    
T  31364094 acttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaacgacat---aaatgatcatataatacttcaaaaacac--aactt 31364188  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaa 325  Q
    ||||| |||||||||||||||||| || ||||||| ||||||||||    
T  31364189 attttaaaaaaacattttacattgttcctaatttaaaaaataaaaa 31364234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 3215934 - 3216048
Alignment:
Q  205 ttataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgc 304  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||| |||| | ||||||||||||||||||||||||||     
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatgataaatgatcatataatacttcataaatacttgatttattttgaaaaaacattttacattgt 3216033  T
Q  305 tcgtaatttacaaaa 319  Q
    || ||||||| ||||    
T  3216034 tcataatttaaaaaa 3216048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 48015402 - 48015278
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| ||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||| |||  ||||||||||||||| ||    
T  48015402 acttttcgtttttaaattacagactttataaaataatttttggaaaattgaattaacaacatgataaatgatcatataatttttcaaaaacacttaattt 48015303  T
Q  280 attt-tgaaaaaacattttacattg 303  Q
    ||||   ||||||||||||||||||    
T  48015302 atttaaaaaaaaacattttacattg 48015278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 3143675 - 3143531
Alignment:
Q  184 ttcttttttagattacggacattataaaataatttttagaaaatt----taattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||| ||||  ||||||||||||||||||||| ||||||    |||||||||| |||||||||||||||| ||||||||||||| |||||| ||    
T  3143675 ttcttttttaaattaatgacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaattt 3143576  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||  ||||| ||||||||||| |  ||||||| |||| ||||    
T  3143575 attttataaaaatattttacattgtttataatttaaaaaaaaaaa 3143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 12670928 - 12671029
Alignment:
Q  223 aaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataa 322  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||  ||||||||||| |||||| ||||| |||| |||||||    
T  12670928 aaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattcatttacaaaaaacatttcacattgttcgtagtttaaaaaataa 12671027  T
Q  323 aa 324  Q
    ||    
T  12671028 aa 12671029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 2087788 - 2087903
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaa----tgatcataaaatacttcaaaaacactta 275  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||| | ||||||||||||||||||    |||||||| ||||||||||||||| | |    
T  2087788 acttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataattgatcatataatacttcaaaaacattaa 2087887  T
Q  276 acttattttgaaaaaa 291  Q
    | ||||||| ||||||    
T  2087888 atttattttaaaaaaa 2087903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 8122322 - 8122195
Alignment:
Q  201 gacattataaaataatttttagaaaatttaattaacaacatgataaatgatcata----aaatacttcaaaaacacttaacttattttgaaaaaacattt 296  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||     ||||||||||||||| |||| ||||||| ||| || ||||    
T  8122322 gacattataaaataatttttagaaaattgaattaacaagatgataaattatcatataattaatacttcaaaaacaattaatttattttaaaacaatattt 8122223  T
Q  297 tacattgctcgtaatttacaaaataaaa 324  Q
    || || | |||||||||| |||||||||    
T  8122222 tatatggttcgtaatttaaaaaataaaa 8122195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 291
Target Start/End: Complemental strand, 48094127 - 48093977
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaaca 240  Q
    |||||||||||||||| ||| ||||||| |||| |||| |||||||||||||| |||||| ||  ||||||||  |||||| | |||| || ||| || |    
T  48094127 agggtgtgtttggatgtaggatttaggaggggaggatttacttttcttttttaaattacgaacgctataaaatcttttttatagaattgaaataataaaa 48094028  T
Q  241 tgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaa 291  Q
    ||||||||||||||| ||||||| ||  |||||||| ||||||| ||||||    
T  48094027 tgataaatgatcatataatactttaaccacacttaatttattttaaaaaaa 48093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 291
Target Start/End: Original strand, 23116269 - 23116420
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaa-taatttttagaaaatttaattaacaac 239  Q
    |||||||||||||||| |||||||||||||||| |  | |||||||||||||| ||||| |||| ||||||| |  || ||| |||||| || || ||||    
T  23116269 agggtgtgtttggatggagggtttaggaagggagggcttacttttcttttttaaattacagacactataaaagtgtttattaaaaaattgaaatagcaac 23116368  T
Q  240 atgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaa 291  Q
    |||||||||||| ||| ||||||||||  |||||||| || |||| ||||||    
T  23116369 atgataaatgattatataatacttcaatcacacttaattttttttaaaaaaa 23116420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 16833867 - 16833779
Alignment:
Q  203 cattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaa 291  Q
    |||||||| |||||||||| |||||| |||||| ||||||||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  16833867 cattataatataatttttataaaattgaattaataacatgataaatgatcatgtaatacttcaaaaacacttaatttttttttaaaaaa 16833779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 294
Target Start/End: Complemental strand, 17853106 - 17852952
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaa 238  Q
    |||||||||||||||||| ||||||||||| |||| |  | ||||||| |||||| ||||||  || ||| ||| | |||||| |||  | || ||||||    
T  17853106 taagggtgtgtttggatggagggtttaggaggggagggcttacttttcatttttaaattacgagcactatgaaa-agtttttaaaaagataaaataacaa 17853008  T
Q  239 catgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||| ||||||| ||||| ||||  |||||||| |||||||  ||||||||    
T  17853007 catgataaacgatcatataatacctcaatcacacttaatttattttagaaaaacat 17852952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 12682850 - 12682922
Alignment:
Q  252 cataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||| |||||||||||||||||||| ||||||  |||| ||||||||||||| ||||| |||| |||||||||    
T  12682850 catataatacttcaaaaacacttaatttatttaaaaaatacattttacattgttcgtagtttaaaaaataaaa 12682922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 33655157 - 33655301
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| |||||||||| ||| ||||  |||||| ||| || |  ||  ||||||||||||||||||| ||||||||||  |||||||| ||    
T  33655157 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttaattt 33655256  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||  |||||||| ||| || || | ||||||| |||| ||||    
T  33655257 attttagaaaaacatgttatatagcccataatttaaaaaagaaaa 33655301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 18795697 - 18795788
Alignment:
Q  233 taacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||| |||||||||| || |||| ||||| ||||||| | || |||| ||||||||||||| |||| |||||||||| |||| ||||    
T  18795697 taacaacataataaatgatcgtacaataattcaataacacttgatttgttttaaaaaaacattttatattgttcgtaatttaaaaaagaaaa 18795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 30592302 - 30592388
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaa 266  Q
    |||||||||||||| ||||| |||| |||||||| ||||||| |||||| || |||  | ||||||||| |||||| ||||||||||    
T  30592302 acttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaataatcatatgataaataatcatataatacttcaa 30592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 7791894 - 7791796
Alignment:
Q  200 ggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 298  Q
    ||||| ||||||||| ||||| ||||||| || ||| |||||||||||| |||||| ||||||| ||  ||| |||| |||| || ||||||| |||||    
T  7791894 ggacactataaaatacttttttgaaaattgaaataaaaacatgataaataatcatataatacttaaatcacatttaatttatgttaaaaaaacgtttta 7791796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 18063667 - 18063721
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaa 291  Q
    ||||||||||||||||||| ||||||||||  |||||||| ||||||| ||||||    
T  18063667 aacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaa 18063721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 346
Target Start/End: Original strand, 41497063 - 41497172
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgcc 336  Q
    ||||||||||||||||||| ||| ||||||  |||||||| |||||||  |||||||| ||| || |  ||||||||| |||| |||| | |||  | ||    
T  41497063 aacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctccc 41497162  T
Q  337 ctcccttccc 346  Q
    ||||||||||    
T  41497163 ctcccttccc 41497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 22163215 - 22163273
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatt 295  Q
    ||||||||||| ||||||| ||||||||||  |||||||| |||||||  |||||||||    
T  22163215 aacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatt 22163273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 22221923 - 22221981
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatt 295  Q
    ||||||||||| ||||||| ||||||||||  |||||||| |||||||  |||||||||    
T  22221923 aacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatt 22221981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 37417740 - 37417793
Alignment:
Q  238 acatgataaatgatcataaaatacttcaaaaacacttaactt-attttgaaaaa 290  Q
    |||||||||| ||||||| ||||||||||  ||||||||||| |||||||||||    
T  37417740 acatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaa 37417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 48881796 - 48881735
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattac 199  Q
    ||||||||||||||||||  ||||||||||| |||||| || ||||||  |||||| |||||    
T  48881796 ttaagggtgtgtttggattgagggtttaggaggggaaggttcacttttaatttttaaattac 48881735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 37417869 - 37417805
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggac 203  Q
    |||||||||||||||||  ||||||||||| |||| | || ||||||| |||||| || ||||||    
T  37417869 taagggtgtgtttggattgagggtttaggaggggatggtttacttttcatttttaaataacggac 37417805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 48152227 - 48152191
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaa 174  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  48152227 ttaagggtgtgtttggatgaaaggtttagaaagggaa 48152191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 170 - 330
Target Start/End: Complemental strand, 26318510 - 26318350
Alignment:
Q  170 gggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaa 269  Q
    ||||||||| |||||||||||||| |||| |||  ||||||||| | |||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  26318510 gggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaattaacaacatgataattgatcatataatacttcaaaaa 26318411  T
Q  270 cacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    ||||||| ||||||| ||||||||||||| |||  |||||||||| |||||||||||||||    
T  26318410 cacttaatttattttaaaaaaacattttatatttttcgtaatttaaaaaataaaaatgaac 26318350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 180 - 347
Target Start/End: Original strand, 9051583 - 9051748
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||| ||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||   ||||| |||||||||||| ||    
T  9051583 actttttttttttaaattacggatattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatatgctactttaaaaacacttaattt 9051682  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||  |||||| ||||||||||| |||||||||| ||||||||| ||| | || |||||||||||||    
T  9051683 atttaaaaaaaatattttacattgttcgtaattta-aaaataaaagtgagc-atcccctcccttcccc 9051748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 15323405 - 15323276
Alignment:
Q  195 attacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||||||||| ||||||| |||| | ||    
T  15323405 attacggacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcagaaacacttaatttattttaaaaatatat 15323306  T
Q  295 tttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||| |||||||||| |||||||||    
T  15323305 tttacattgttcgtaatttaaaaaataaaa 15323276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 15353543 - 15353415
Alignment:
Q  195 attacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||| | ||||||  |||||||||    
T  15353543 attacggacattataaaatgatttttagaaaattgaattaacaacattataaatgatcatataatacatcaaaaacactt-atttatttcaaaaaaacat 15353445  T
Q  295 tttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||| |||||||||| |||||||||    
T  15353444 tttacattgttcgtaatttaaaaaataaaa 15353415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 31799116 - 31798969
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||| ||||||||||||||| ||   ||    
T  31799116 acttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacatttttttt 31799017  T
Q  280 att---ttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||      ||||||||||||||||||||||||||||| |||||||||    
T  31799016 attaaaaaaaaaaaacattttacattgctcgtaatttaaaaaataaaa 31798969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 25468448 - 25468562
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||||| | |||||||| ||||||||||| ||| |||||||||||||||||||| ||    
T  25468448 acttttcttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtgataaatgattatataatacttcaaaaacacttaattt 25468547  T
Q  280 attttgaaaaaacat 294  Q
    ||||| |||||||||    
T  25468548 attttaaaaaaacat 25468562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 303
Target Start/End: Complemental strand, 3841332 - 3841156
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagatta----------acttttcttttttagattacggacattataaaataattttt--agaaaa 226  Q
    |||||||||||||||||||||||||||||| |||||||  |          |||||||||||||| ||||||||||||||||||| ||||||  | ||||    
T  3841332 taagggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggacattataaaatgatttttttacaaaa 3841233  T
Q  227 tttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttatttt-gaaaaaacattttacattg 303  Q
    || ||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||||||||    
T  3841232 ttgaattaacaa-atgataaatgatgatataatacttcaaaaacacttaatttattttaaaaaaaacattttacattg 3841156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 4097284 - 4097395
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||| ||||||  || ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||    
T  4097284 acttttattttttgaatcacggacattataaaatattttttagaaaattgaattaacaacatgataaatgatcatacaatacttccaaaacacttaattt 4097383  T
Q  280 attttgaaaaaa 291  Q
    ||||| ||||||    
T  4097384 atttttaaaaaa 4097395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 10293443 - 10293301
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||| | ||||| || |||||||||| |||||||||||| | |||| ||||||| |||||| |||||| |||||||||||||    ||| ||    
T  10293443 acttttctttttcaaattacagatattataaaatgatttttagaaaactgaattgacaacatcataaataatcatataatacttcaaaaatcggtaattt 10293344  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||  ||||| ||||||||||| |||||||||| |||||||||    
T  10293343 atttt--aaaaatattttacattgttcgtaatttaaaaaataaaa 10293301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 15373668 - 15373739
Alignment:
Q  200 ggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaaca 271  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||    
T  15373668 ggacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 34176610 - 34176711
Alignment:
Q  170 gggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaa 269  Q
    ||||||| | |||||||||||||| |||||| | |||||||| | ||||||| |||||| ||||||||| || ||||||||||||| |||| ||||||||    
T  34176610 gggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatataataaatgatcatataatatttcaaaaa 34176709  T
Q  270 ca 271  Q
    ||    
T  34176710 ca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 30849919 - 30850047
Alignment:
Q  136 ctttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaa 235  Q
    |||||||||| ||| |||||||||||||| ||| |||| |||| || |||| |||||| |||||| | | ||||||||| |||||  |||||| || |||    
T  30849919 ctttaagggtatgtatggatgaagggtttgggaggggaggatttacatttcgtttttaaattacgcatactataaaatatttttt--aaaattaaaataa 30850016  T
Q  236 caacatgataaatgatcataaaatacttcaa 266  Q
     ||||||||||| ||||||| ||||||||||    
T  30850017 taacatgataaacgatcatataatacttcaa 30850047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 29693079 - 29692977
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaa--------catgataaatgatcataaaatacttcaaaaacact 273  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||| | |||||||||        ||||||||||||||||  |||||||||||||||||    
T  29693079 ttttcttttttaaattacagacattataaaataattcttagaaaaataaattaacaaaagaaaatcatgataaatgatcatgtaatacttcaaaaacact 29692980  T
Q  274 taa 276  Q
    |||    
T  29692979 taa 29692977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 28477182 - 28477079
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaa---------catgataaatgatcataaaatacttcaaaaacac 272  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||| | |||||||||         ||||||||||||||||  ||||||||||||||||    
T  28477182 ttttcttttttaaattacagacattataaaataattcttagaaaaataaattaacaaaagaaaaatcatgataaatgatcatgtaatacttcaaaaacac 28477083  T
Q  273 ttaa 276  Q
    ||||    
T  28477082 ttaa 28477079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 347
Target Start/End: Original strand, 4097618 - 4097729
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttatttt-gaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgc 335  Q
    ||||||||||| ||||||| ||||||||||  |||||||| ||||||| ||||||| || ||| ||||  ||||||||| |||| |||| |||||  | |    
T  4097618 aacatgataaacgatcatataatacttcaatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacccttc 4097717  T
Q  336 cctcccttcccc 347  Q
    ||||||||||||    
T  4097718 cctcccttcccc 4097729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 347
Target Start/End: Complemental strand, 23091118 - 23091023
Alignment:
Q  252 cataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    |||| |||||||||||||||||||| ||| ||| |||| |||||||| |||| |||||||||| || |||||| ||| |  | |||||||||||||    
T  23091118 catataatacttcaaaaacacttaatttagtttaaaaatacattttagattgttcgtaatttaaaagataaaagtgagccctcccctcccttcccc 23091023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 382980 - 383026
Alignment:
Q  257 aatacttcaaaaacacttaacttattttgaaaaaacattttacattg 303  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  382980 aatacttcaaaaacacttaatttattttaaaaaaacattttacattg 383026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 21606852 - 21606915
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacgga 202  Q
    |||||||||||||||||| ||||||||||| |||| | || ||||||| |||||| ||||||||    
T  21606852 taagggtgtgtttggatggagggtttaggaggggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 34177040 - 34177093
Alignment:
Q  272 cttaacttattttgaa-aaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| |||||||||    
T  34177040 cttaatttattttgaagaaaacattttacattgttcgtaatttaaaaaataaaa 34177093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 298
Target Start/End: Original strand, 16738035 - 16738163
Alignment:
Q  170 gggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaa 269  Q
    ||||||||| ||||||| |||||| |||| ||| | ||| ||||  |||||   ||||| || ||| ||||||||| | ||||||| ||||||| || ||    
T  16738035 gggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaataataacatgatatacgatcatataatacttaaataa 16738134  T
Q  270 cacttaacttattttgaaaaaacatttta 298  Q
    ||||||  |||||||  ||||||||||||    
T  16738135 cacttactttattttagaaaaacatttta 16738163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 10818411 - 10818325
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaa 266  Q
    ||||||| |||||| |||||||||| ||| ||||  |||||| || ||| |  ||  ||||||||||||||||||| ||||||||||    
T  10818411 acttttcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatcatataatacttcaa 10818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 31849346 - 31849272
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaat 213  Q
    ||||||||||||| |||| || ||| |||| |||| | || ||||||| |||||| |||||||||| ||||||||    
T  31849346 taagggtgtgtttagatggagagttcaggaggggagggttcacttttcatttttaaattacggacactataaaat 31849272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 32926783 - 32926737
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattt 283  Q
    ||||||||||||||||||| ||||||||||  |||||||| ||||||    
T  32926783 aacatgataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 15373733 - 15373770
Alignment:
Q  287 aaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  15373733 aaaaacattttacattgttcgtaatttaaaaaataaaa 15373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 30487303 - 30487340
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  30487303 ttaagggtgtgtttggatggagggtttaggaggggaag 30487340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 180 - 324
Target Start/End: Complemental strand, 45257502 - 45257358
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||| |||||||||| |||||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  45257502 acttttcttttttaaattacggatattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaattt 45257403  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||| | |||||||||||||||| |||||||||| |||||||||    
T  45257402 attttaagaaaacattttacattgttcgtaatttataaaataaaa 45257358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 324
Target Start/End: Original strand, 15085751 - 15085894
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta- 280  Q
    |||| ||||| | ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||     
T  15085751 ttttttttttaaaattacggacattataaaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttcaaaaacacttaatttat 15085850  T
Q  281 ttttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||| |||||| |||||| |||| |||||||||| |||||||||    
T  15085851 tttttaaaaaatattttatattgttcgtaatttaaaaaataaaa 15085894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 31061565 - 31061410
Alignment:
Q  170 gggaagattaacttttctttttt-agattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaa 268  Q
    |||| |||| ||||||||||||| | ||||| ||||||||||| | | |||| ||||||| |||||||||||||||||||||||||| |||| |||||||    
T  31061565 gggaggatttacttttctttttttaaattacagacattataaagtgactttttgaaaattgaattaacaacatgataaatgatcatataatatttcaaaa 31061466  T
Q  269 acacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||| ||||||| |||| ||||||||||||| |||||||||| |||||||||    
T  31061465 acacttaatttattttaaaaacacattttacattgttcgtaatttaaaaaataaaa 31061410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 170 - 324
Target Start/End: Original strand, 1052793 - 1052949
Alignment:
Q  170 gggaagattaacttttctttttt-agattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaa 268  Q
    ||||||||| ||||||||||||| | ||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| |||||||    
T  1052793 gggaagatttacttttctttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatgataaatgatcgtataatatttcaaaa 1052892  T
Q  269 acacttaacttattt-tgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||| |||| ||||||   |||||||||||||||||| |||||||||| |||||||||    
T  1052893 acatttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaa 1052949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 347
Target Start/End: Original strand, 42296352 - 42296519
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| |||||||| |||||||||| | |||||||||| | |||||||||||| ||||||||||||| |||| || |||||||||||| |     
T  42296352 acttttcttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacataataaatgatcatataataatttaaaaacacttaattc 42296451  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||||| |||||| ||||||||| | |||||||||| ||||||||| |||||  |  ||||||||||||    
T  42296452 attttaaaaaaatattttacatcgttcgtaatttaaaaaataaaagtgaaccctctcctcccttcccc 42296519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 328
Target Start/End: Complemental strand, 33265838 - 33265654
Alignment:
Q  144 gtgtgtttggatgaagggtttaggaagggaag-attaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatg 242  Q
    |||| |||||||  ||||||||||||||| || | |  ||||| ||||||| |||| | ||| | |||||| |||||| ||||||| ||||||||| |||    
T  33265838 gtgtatttggattgagggtttaggaaggggaggactcgcttttattttttaaattatgaacaatgtaaaatgattttttgaaaattgaattaacaatatg 33265739  T
Q  243 ataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatga 328  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||  |||||||||| |||||||||| |||||||||||||    
T  33265738 ataaatgatcatataatacttcaaaaacacttaatttatttt-aaaaaatgttttacattgttcgtaatttaaaaaataaaaatga 33265654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 2381060 - 2381186
Alignment:
Q  204 attataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattg 303  Q
    |||||||||| | |||||||||||| |||| ||||||||||  ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  2381060 attataaaatgaattttagaaaattgaattgacaacatgattgatgatgatataatacttcaaaaacacttaatttattttaaaaaaacattttacattg 2381159  T
Q  304 ctcgtaatttacaaaataaaaatgaac 330  Q
     |||||||||| ||||||||| |||||    
T  2381160 ttcgtaatttaaaaaataaaagtgaac 2381186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 35325463 - 35325318
Alignment:
Q  181 cttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta 280  Q
    |||||| |||||| ||||  ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||| |||||| |||    
T  35325463 cttttcctttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgataaatgatcatataatacttcaaaaatacttaattta 35325364  T
Q  281 ttttgaaaaa--acattttacattgctcgtaatttacaaaataaaa 324  Q
    |||| |||||  | ||||||||||| |||||||| | |||||||||    
T  35325363 ttttaaaaaaatatattttacattgttcgtaattaaaaaaataaaa 35325318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 3094407 - 3094546
Alignment:
Q  185 tcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttatttt 284  Q
    ||||||||| |||||| || ||||||||| ||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||  || |||||||    
T  3094407 tcttttttaaattacgaacgttataaaatgattcttagaaaattgaattaacaacatgataaataatcatataatacttcaaaaacacgaaatttatttt 3094506  T
Q  285 gaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
      ||||||||||||||| | | |||||||| |||||||||    
T  3094507 agaaaaacattttacatagtttgtaatttaaaaaataaaa 3094546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 324
Target Start/End: Complemental strand, 45098355 - 45098220
Alignment:
Q  189 ttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaa 288  Q
    ||||| ||||| |||||||||||||  |||||  |||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaa 45098256  T
Q  289 aaacattttacattgctcgtaatttacaaaataaaa 324  Q
    | ||||||||||||  | ||||| || |||||||||    
T  45098255 atacattttacattatttgtaatgtaaaaaataaaa 45098220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 195 - 330
Target Start/End: Complemental strand, 34187757 - 34187620
Alignment:
Q  195 attacggacattataaaataatttttagaaaatttaattaacaacatgataaatgat--cataaaatacttcaaaaacacttaacttattttgaaaaaac 292  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||| ||||||| | |||||    
T  34187757 attatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgattatatataatacttcaaaaacacttaatttattttaataaaac 34187658  T
Q  293 attttacattgctcgtaatttacaaaataaaaatgaac 330  Q
    || |||| ||| |||||||||| ||| ||||| |||||    
T  34187657 atcttacgttgttcgtaatttaaaaattaaaagtgaac 34187620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 21502226 - 21502084
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttat 281  Q
    |||||||||||| | |||||| |||||||||||||||| ||||||||  |||||||||| |||||||| ||||| |||||||||||||||||||| ||||    
T  21502226 ttttcttttttaaactacggatattataaaataattttaagaaaattgcattaacaacaagataaatggtcatataatacttcaaaaacacttaatttat 21502127  T
Q  282 ttt--gaaaaaacattttacattgctcgtaatttacaaaataaa 323  Q
    |||   |||||| |||||| |||| |||||||||| ||||||||    
T  21502126 ttttaaaaaaaatattttatattgttcgtaattta-aaaataaa 21502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 36052105 - 36052260
Alignment:
Q  149 tttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaat 248  Q
    |||||||| ||  ||||||| |||| || | |||||||| ||||| |||||  |||||||||||| |||||||||||||| |||||||||||| ||| ||    
T  36052105 tttggatggagaatttaggaggggacgacttacttttctattttaaattacatacattataaaatgatttttagaaaattgaattaacaacatcatacat 36052204  T
Q  249 gatcataaaatacttcaaaaacacttaac-ttattttgaaaa-aacattttacatt 302  Q
    |||||||  ||||||||||||||||| || ||||||| |||| || ||||||||||    
T  36052205 gatcatatgatacttcaaaaacactttactttatttttaaaagaatattttacatt 36052260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 8554351 - 8554441
Alignment:
Q  183 tttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacact 273  Q
    ||||||||| | ||||||||||||||||||||||||||  |||||| |||||||| |||||||||||||| || |||||||||||||||||    
T  8554351 tttctttttcaaattacggacattataaaataattttttaaaaattgaattaacatcatgataaatgatcgtacaatacttcaaaaacact 8554441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 42813866 - 42813726
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaagat----------taacttttcttttttagattacggacattataaaataatttttagaaaatt 228  Q
    |||||||||||||||||||||||||||||| |||||||           | | |||||||||||| |||||| |||||||||||| ||||||||||||||    
T  42813866 taagggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaatt 42813767  T
Q  229 taattaacaacatgataaatgatcataaaatacttcaaaaa 269  Q
     |||||||||| |||||||| |||||| ||||||| |||||    
T  42813766 gaattaacaacctgataaataatcatataatactttaaaaa 42813726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 329
Target Start/End: Complemental strand, 22356106 - 22356011
Alignment:
Q  234 aacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaa 329  Q
    ||||| |||||  ||||| ||| ||||||||||||||||||||  |||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  22356106 aacaaaatgattgatgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaa 22356011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 31928121 - 31928242
Alignment:
Q  208 taaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattt-----tgaaaaaacattttacatt 302  Q
    |||||| ||||||  |||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||       |||||||||||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaaacattttacatt 31928220  T
Q  303 gctcgtaatttacaaaataaaa 324  Q
    | | |||||||| ||| |||||    
T  31928221 gtttgtaatttaaaaattaaaa 31928242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 9313182 - 9313082
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatc----ataaaatacttcaaaaacactta 275  Q
    ||||||| |||||| ||||| ||||||||||||| |||||| ||||||| |||||||||| ||||||||||||    |||  ||||||||||||||||||    
T  9313182 acttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttgataaatgatcgatcatattatacttcaaaaacactta 9313083  T
Q  276 a 276  Q
    |    
T  9313082 a 9313082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 39821902 - 39821750
Alignment:
Q  142 gggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacat 241  Q
    ||||||||||||||| ||||||||||| |||| | || | |||||||||||| |||||||||| ||| ||||||| |||| | | || |  ||  |||||    
T  39821902 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacat 39821803  T
Q  242 gataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||||| || ||||||| ||   ||||||| |||||||  ||||||||    
T  39821802 gataaatgatcttataatacttaaatcgcacttaatttattttagaaaaacat 39821750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 347
Target Start/End: Original strand, 15224743 - 15224910
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| |||||||||| ||| ||||  |||||| |||  | |  ||  ||||||||||||||||||| ||||||||||  |||||||| ||    
T  15224743 acttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatcacacttaattt 15224842  T
Q  280 attttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccctcccttcccc 347  Q
    ||| |  |||||||| ||| || || ||||||||| |||| |||| | ||| || |||||||||||||    
T  15224843 attctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccc 15224910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 347
Target Start/End: Complemental strand, 16713630 - 16713520
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgcc 336  Q
    ||||||||||||||  ||| |||||||||||||||| ||| || |||| |||||| |||||| ||||  ||||||||| ||| ||||| ||||| || ||    
T  16713630 aacatgataaatgaatatataatacttcaaaaacacataatttcttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatccc 16713531  T
Q  337 ctcccttcccc 347  Q
     ||||||||||    
T  16713530 ttcccttcccc 16713520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 31795818 - 31795932
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    ||||||| |||||| |||||||||| ||| |||   |||||  |||| | || ||||||||||||||| ||||||| ||||||||||  |||||||| ||    
T  31795818 acttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaataacaacatgataaacgatcatataatacttcaatcacacttaattt 31795917  T
Q  280 attttgaaaaaacat 294  Q
    ||||| |||||||||    
T  31795918 attttaaaaaaacat 31795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 1270394 - 1270471
Alignment:
Q  248 tgatcataaaatacttcaaaaacacttaacttattttgaaaa-aacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||| || ||||||||||||||||| ||||||  |||| |||||||||||||| |||||||||| |||||||||    
T  1270394 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaa 1270471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 16713718 - 16713650
Alignment:
Q  182 ttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatga 250  Q
    |||||||||| | | |||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  16713718 ttttctttttaaaactacggatattataaaataatttttagaaaattgaattaataacatgagaaatga 16713650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 22356197 - 22356134
Alignment:
Q  182 ttttcttttttagattacggacatt-ataaaataatttttagaaaatttaattaacaacatgat 244  Q
    |||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||| |||||    
T  22356197 ttttcttttttaaattacggacatttataaaatgatttttagaaaattgaattaacaaaatgat 22356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 23739882 - 23739948
Alignment:
Q  257 aatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaa 323  Q
    ||||||||||||||| |||| ||||||| |||||||||||||| ||  |||||||||| ||||||||    
T  23739882 aatacttcaaaaacatttaatttattttaaaaaaacattttacttttttcgtaatttaaaaaataaa 23739948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 41778906 - 41778850
Alignment:
Q  242 gataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatttta 298  Q
    |||||||||||||| ||||||||||  |||||||| ||||||| |||||||||||||    
T  41778906 gataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatttta 41778850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 17333937 - 17333983
Alignment:
Q  257 aatacttcaaaaacacttaacttattttgaaaaaacattttacattg 303  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||    
T  17333937 aatacttcaaaaacacttaatttattttaaaaagacattttacattg 17333983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 36347538 - 36347575
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  36347538 ttaagggtgtgtttggatgaagggtttaggaggggaag 36347575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 1583311 - 1583239
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaat 213  Q
    ||||| |||||||||| ||||||||||| |||| | || ||||||| |||||| |||||||||| ||| ||||    
T  1583311 agggtttgtttggatggagggtttaggaggggagggttcacttttcatttttaaattacggacactatgaaat 1583239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 887051 - 886988
Alignment:
Q  240 atgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattg 303  Q
    |||||||||||||||| ||||||||||  |||| ||| ||||||| ||||| ||||||| ||||    
T  887051 atgataaatgatcatataatacttcaatcacacataatttattttaaaaaagcattttatattg 886988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 37739997 - 37740055
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttatttt-gaaaaaacat 294  Q
    ||||||||||| ||||||| ||||||||||  |||||||| ||||||| ||||||||||    
T  37739997 aacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacat 37740055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 8426977 - 8427034
Alignment:
Q  237 aacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacat 294  Q
    ||||||||||||||||||| ||||||||||   ||||||| |||||||  ||||||||    
T  8426977 aacatgataaatgatcatataatacttcaatcgcacttaatttattttagaaaaacat 8427034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 23748342 - 23748305
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  23748342 ttaagggtgtgtttggatggagggtttaggaggggaag 23748305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 15224940 - 15224904
Alignment:
Q  139 taagggtgtgtttggatgaagggtttaggaagggaag 175  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  15224940 taagggtgtgtttggatcaagggtttaggaggggaag 15224904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 37577 - 37434
Alignment:
Q  181 cttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactta 280  Q
    ||||||||||||| ||||| |||| ||||| || |||||||||||| ||||||||||||||||||| |||||||| || ||||||||||||||| | |||    
T  37577 cttttcttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatgataagtgatcatataacacttcaaaaacacttgattta 37478  T
Q  281 ttttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||| |||||||||||||||||| |||||||||| |||||||||    
T  37477 ttttaaaaaaacattttacattgttcgtaatttaaaaaataaaa 37434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 30843 - 30766
Alignment:
Q  248 tgatcataaaatacttcaaaaacacttaacttattttgaaaaaa-cattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||| || ||||||||||||||||| ||||||  |||||| |||||||||||| |||||||||| |||||||||    
T  30843 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaa 30766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 138 - 324
Target Start/End: Complemental strand, 53120 - 52937
Alignment:
Q  138 ttaagggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaaca 237  Q
    ||||||||||||||||||| |||||||||||  |||  ||  |||||||||||||| |||| || |||||| |||| |||||| ||||||| || |||||    
T  53120 ttaagggtgtgtttggatggagggtttagga--ggacaatgtacttttcttttttaaattatgggcattatgaaatgattttttgaaaattgaactaaca 53023  T
Q  238 acatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    |||||||||||||||||| |||| |||||||||||||||  || ||| |||||| ||||||||||| | |||||||| |||||||||    
T  53022 acatgataaatgatcatataatatttcaaaaacacttaatgta-tttaaaaaaatattttacattgtttgtaatttaaaaaataaaa 52937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 52896 - 52975
Alignment:
Q  141 agggtgtgtttggatgaagggtttaggaagggaagattaacttttcttttttagattacggacattataaaataattttt 220  Q
    |||||||||||||||  ||||||||||| ||||||| | |||||| ||||||| |||||  ||| | ||||||| |||||    
T  52896 agggtgtgtttggattgagggtttaggatgggaagactcacttttattttttaaattacaaacaatgtaaaatatttttt 52975  T

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Target: scaffold0026 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 1446 - 1591
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| | | ||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||| |||||| ||    
T  1446 acttttcttttttaaactgcggacattatagaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttaaaaaatacttaattt 1545  T
Q  280 attttga-aaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
    ||||  | ||||||||||||||||| |||||||||| |||||||||    
T  1546 atttaaagaaaaacattttacattgttcgtaatttaaaaaataaaa 1591  T

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Target: scaffold0095 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 8317 - 8198
Alignment:
Q  205 ttataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgc 304  Q
    ||||||||| ||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||| |||| |||| || |||| |||||| ||||||     
T  8317 ttataaaattatttttaaaaaattgaattaacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgt 8218  T
Q  305 tcgtaatttacaaaataaaa 324  Q
    |||||||||| |||||||||    
T  8217 tcgtaatttaaaaaataaaa 8198  T

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Target: scaffold0007 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 242411 - 242275
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaactt 279  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||| ||| |||| |||||||| |||| | ||    
T  242411 acttttcttttttaaattacggacattataaaatgatttttaaaaaattgaattaacgacatgataaatgatgatataataattcaaaaatacttcattt 242312  T
Q  280 atttt----gaaaaaacattttacattgctcgtaatt 312  Q
    |||||     ||||||||||||| |||| ||||||||    
T  242311 attttaataaaaaaaacattttatattgttcgtaatt 242275  T

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Target: scaffold0012 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 184816 - 184698
Alignment:
Q  166 ggaagggaagattaacttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttca 265  Q
    |||||||| | || ||| |||||||||| |||| |||||||||||||| ||||||  |||||| |||||||||||||||| || |||||| |||||||||    
T  184816 ggaagggagggtttactattcttttttaaattatggacattataaaatgatttttttaaaattgaattaacaacatgatatattatcatataatacttca 184717  T
Q  266 -aaaacacttaacttattt 283  Q
     ||||||||||| ||||||    
T  184716 aaaaacacttaatttattt 184698  T

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Target: scaffold1414 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 473 - 355
Alignment:
Q  204 attataaaataatttttagaaaatttaa-ttaacaacatgataaatgatcataaaatacttcaaaaacacttaacttatt--ttgaaaaaacattttaca 300  Q
    |||||||||| |||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||| |||||  |  ||||||||||||||     
T  473 attataaaatgatttttagaaaattaaaattaacagcatgataaatgataataaaatacttcaaaaacacttaa-ttatttataaaaaaaacattttacg 375  T
Q  301 ttgctcgtaatttacaaaat 320  Q
    ||| ||||||| || |||||    
T  374 ttgttcgtaatataaaaaat 355  T

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Target: scaffold0240 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 17735 - 17640
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaatacttcaaaaacactta 275  Q
    |||||||||||||| |||||  | |||||||||| |||||| ||||||| ||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  17735 acttttcttttttaaattacaaatattataaaatgattttttgaaaattgaattagcaacatgataaataatcatataatacttcaaatacactta 17640  T

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Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 324
Target Start/End: Original strand, 39236 - 39383
Alignment:
Q  180 acttttcttttttagattacggacattataaaataatttttagaaaatttaattaacaacatgataaatgatcataaaata---cttcaaaaacacttaa 276  Q
    ||||||| |||||| |||||||||| ||| ||||  |||||| ||| || |  ||  ||||||||||||||||||| ||||   ||||||  ||||||||    
T  39236 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaa 39335  T
Q  277 cttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 324  Q
     |||||||  |||||||| |||||| |  ||||||||| |||| ||||    
T  39336 tttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaa 39383  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 69272 - 69374
Alignment:
Q  197 tacggacattataaaataatttttagaa-aatttaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacatt 295  Q
    |||| ||||||||||||  |||| | || |||| || |||||| |||||||||||||||| ||||||||    || ||||| ||||||| ||||||||||    
T  69272 tacgaacattataaaatctttttaaaaagaattgaaataacaagatgataaatgatcatataatacttctgtcacccttaatttattttaaaaaaacatt 69371  T
Q  296 tta 298  Q
    |||    
T  69372 tta 69374  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 15504 - 15472
Alignment:
Q  143 ggtgtgtttggatgaagggtttaggaagggaag 175  Q
    |||||||||||||| ||||||||||||||||||    
T  15504 ggtgtgtttggatggagggtttaggaagggaag 15472  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 81498 - 81546
Alignment:
Q  218 tttagaaaatttaattaacaacatgataaatgatcataaaatacttcaa 266  Q
    |||| |||||| || ||| ||||||||||||||||||| ||||||||||    
T  81498 tttaaaaaattgaaataataacatgataaatgatcatataatacttcaa 81546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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