View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14579_low_31 (Length: 298)

Name: NF14579_low_31
Description: NF14579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14579_low_31
NF14579_low_31
[»] chr8 (47 HSPs)
chr8 (18-282)||(32231769-32232037)
chr8 (161-282)||(14689897-14690018)
chr8 (172-282)||(2195416-2195526)
chr8 (172-282)||(42412432-42412542)
chr8 (161-282)||(2796976-2797098)
chr8 (172-282)||(25174634-25174744)
chr8 (170-282)||(886497-886609)
chr8 (219-282)||(7258416-7258479)
chr8 (161-282)||(14748755-14748877)
chr8 (172-276)||(8418357-8418464)
chr8 (161-244)||(8566493-8566576)
chr8 (222-282)||(15559179-15559239)
chr8 (161-282)||(37459287-37459408)
chr8 (223-282)||(5392048-5392107)
chr8 (219-282)||(10728971-10729034)
chr8 (161-276)||(33743712-33743828)
chr8 (161-207)||(8394642-8394688)
chr8 (220-282)||(27973735-27973797)
chr8 (220-282)||(28031004-28031066)
chr8 (219-273)||(28791303-28791357)
chr8 (223-276)||(38252493-38252546)
chr8 (161-247)||(45421024-45421110)
chr8 (179-276)||(41726476-41726573)
chr8 (219-282)||(2875135-2875198)
chr8 (223-282)||(5962522-5962581)
chr8 (169-208)||(9734481-9734520)
chr8 (221-282)||(17005945-17006003)
chr8 (221-282)||(17571245-17571303)
chr8 (223-282)||(21587276-21587335)
chr8 (223-282)||(33925133-33925192)
chr8 (223-282)||(39171542-39171601)
chr8 (223-282)||(44615414-44615473)
chr8 (232-282)||(27868374-27868424)
chr8 (232-281)||(15020680-15020729)
chr8 (227-276)||(17790125-17790174)
chr8 (221-270)||(27987655-27987704)
chr8 (221-270)||(28044957-28045006)
chr8 (223-276)||(29615797-29615850)
chr8 (223-276)||(32967332-32967385)
chr8 (223-276)||(44790477-44790530)
chr8 (223-271)||(2349349-2349397)
chr8 (232-276)||(11637148-11637192)
chr8 (220-276)||(14117458-14117514)
chr8 (220-276)||(29638297-29638353)
chr8 (223-271)||(33190969-33191017)
chr8 (220-272)||(33826227-33826279)
chr8 (232-276)||(39998171-39998215)
[»] chr4 (55 HSPs)
chr4 (171-282)||(38319858-38319969)
chr4 (161-276)||(54217279-54217394)
chr4 (161-282)||(37315971-37316092)
chr4 (172-282)||(42132761-42132871)
chr4 (174-282)||(17236993-17237101)
chr4 (220-282)||(20964337-20964399)
chr4 (170-282)||(36047149-36047262)
chr4 (223-282)||(42024250-42024309)
chr4 (219-276)||(9052105-9052162)
chr4 (219-276)||(25149446-25149503)
chr4 (221-270)||(51572289-51572338)
chr4 (220-276)||(10099780-10099836)
chr4 (220-276)||(29550782-29550838)
chr4 (219-282)||(22872437-22872500)
chr4 (161-276)||(29990527-29990640)
chr4 (223-282)||(39976439-39976498)
chr4 (223-282)||(41710193-41710252)
chr4 (223-282)||(49306586-49306645)
chr4 (224-282)||(16493345-16493403)
chr4 (220-282)||(28330790-28330852)
chr4 (172-282)||(4360457-4360567)
chr4 (175-208)||(14784426-14784459)
chr4 (223-276)||(38976990-38977043)
chr4 (223-276)||(39052956-39053009)
chr4 (223-276)||(39979779-39979832)
chr4 (223-276)||(41203736-41203789)
chr4 (221-282)||(41436478-41436539)
chr4 (219-276)||(44633152-44633208)
chr4 (221-270)||(47846896-47846945)
chr4 (221-282)||(49448838-49448899)
chr4 (223-271)||(29815157-29815205)
chr4 (220-272)||(40021007-40021059)
chr4 (220-276)||(49401652-49401708)
chr4 (220-276)||(55360403-55360459)
chr4 (223-282)||(1796291-1796350)
chr4 (223-282)||(3686010-3686069)
chr4 (223-270)||(4357567-4357614)
chr4 (223-282)||(8759778-8759837)
chr4 (219-282)||(22020559-22020622)
chr4 (223-270)||(42185857-42185904)
chr4 (161-208)||(42738455-42738502)
chr4 (223-282)||(54729533-54729591)
chr4 (177-276)||(28279790-28279889)
chr4 (161-276)||(43335078-43335193)
chr4 (220-273)||(5499487-5499540)
chr4 (223-276)||(29644354-29644407)
chr4 (223-276)||(34791007-34791060)
chr4 (223-276)||(35998172-35998225)
chr4 (219-276)||(46958717-46958774)
chr4 (175-276)||(49218837-49218939)
chr4 (232-276)||(18509454-18509498)
chr4 (219-275)||(25250649-25250705)
chr4 (222-282)||(27977145-27977205)
chr4 (223-271)||(32559162-32559210)
chr4 (172-208)||(40667701-40667737)
[»] chr6 (19 HSPs)
chr6 (161-282)||(15371912-15372033)
chr6 (170-270)||(2310349-2310449)
chr6 (219-276)||(33017999-33018056)
chr6 (161-282)||(15321274-15321395)
chr6 (161-276)||(33921524-33921639)
chr6 (161-282)||(15325084-15325205)
chr6 (161-274)||(15351440-15351553)
chr6 (223-282)||(30063998-30064057)
chr6 (220-282)||(4552905-4552967)
chr6 (220-282)||(28538992-28539054)
chr6 (223-276)||(15081422-15081475)
chr6 (222-270)||(26356267-26356315)
chr6 (231-270)||(2657908-2657947)
chr6 (223-282)||(3604649-3604708)
chr6 (170-208)||(4552848-4552886)
chr6 (219-276)||(3166163-3166220)
chr6 (224-273)||(6787295-6787344)
chr6 (223-276)||(31265778-31265831)
chr6 (232-276)||(117087-117131)
[»] chr3 (36 HSPs)
chr3 (161-282)||(46194255-46194376)
chr3 (219-282)||(1923085-1923148)
chr3 (161-282)||(39329799-39329920)
chr3 (219-276)||(44219088-44219145)
chr3 (223-282)||(21296552-21296611)
chr3 (172-272)||(42547165-42547265)
chr3 (220-270)||(37041934-37041984)
chr3 (175-270)||(41031523-41031618)
chr3 (177-276)||(50736054-50736153)
chr3 (177-276)||(50776702-50776801)
chr3 (220-282)||(52325173-52325235)
chr3 (223-276)||(1334836-1334889)
chr3 (223-276)||(15280604-15280657)
chr3 (219-276)||(48409579-48409636)
chr3 (172-276)||(30261556-30261661)
chr3 (162-276)||(38600861-38600974)
chr3 (223-282)||(9218144-9218203)
chr3 (223-282)||(54845565-54845624)
chr3 (219-273)||(21585468-21585522)
chr3 (219-276)||(53051021-53051078)
chr3 (223-267)||(47684766-47684810)
chr3 (223-270)||(26134764-26134811)
chr3 (223-282)||(32023150-32023209)
chr3 (223-270)||(32827365-32827412)
chr3 (223-270)||(43639577-43639624)
chr3 (223-270)||(45392089-45392136)
chr3 (223-270)||(54493907-54493954)
chr3 (224-270)||(26832071-26832117)
chr3 (219-273)||(32977848-32977902)
chr3 (170-208)||(36790996-36791034)
chr3 (220-282)||(45746362-45746424)
chr3 (223-276)||(5245411-5245464)
chr3 (219-276)||(29858920-29858977)
chr3 (223-276)||(39365072-39365125)
chr3 (221-270)||(47496166-47496215)
chr3 (231-276)||(54021513-54021558)
[»] chr1 (50 HSPs)
chr1 (161-282)||(29756192-29756315)
chr1 (170-282)||(24131450-24131562)
chr1 (172-282)||(26583676-26583786)
chr1 (176-282)||(29225705-29225811)
chr1 (161-282)||(2886108-2886229)
chr1 (175-276)||(4466210-4466311)
chr1 (173-282)||(31798367-31798476)
chr1 (170-282)||(10587631-10587743)
chr1 (220-282)||(33149269-33149331)
chr1 (219-276)||(36232845-36232902)
chr1 (170-282)||(44580462-44580574)
chr1 (220-282)||(35622829-35622891)
chr1 (220-282)||(37925296-37925358)
chr1 (219-276)||(37541169-37541228)
chr1 (161-282)||(46363461-46363582)
chr1 (219-282)||(2571358-2571421)
chr1 (223-282)||(17724764-17724823)
chr1 (223-282)||(28839338-28839397)
chr1 (223-282)||(51749233-51749292)
chr1 (177-276)||(12267687-12267786)
chr1 (161-276)||(29225464-29225578)
chr1 (223-276)||(28908092-28908145)
chr1 (223-271)||(8327716-8327764)
chr1 (220-276)||(11425925-11425981)
chr1 (220-276)||(14352562-14352618)
chr1 (220-276)||(16040073-16040129)
chr1 (173-270)||(18186268-18186364)
chr1 (220-276)||(20988538-20988594)
chr1 (219-282)||(27831840-27831904)
chr1 (223-282)||(3555605-3555664)
chr1 (219-282)||(19349044-19349107)
chr1 (223-270)||(26755975-26756022)
chr1 (219-282)||(27932883-27932946)
chr1 (223-282)||(46496017-46496076)
chr1 (223-281)||(8773241-8773299)
chr1 (220-270)||(15290489-15290539)
chr1 (219-273)||(26040636-26040690)
chr1 (223-276)||(2219504-2219557)
chr1 (219-276)||(3718905-3718962)
chr1 (221-282)||(13500779-13500840)
chr1 (223-276)||(37525051-37525103)
chr1 (221-282)||(40061806-40061867)
chr1 (172-208)||(1859455-1859491)
chr1 (172-200)||(13409869-13409897)
chr1 (222-270)||(17342826-17342874)
chr1 (221-273)||(28706683-28706735)
chr1 (222-282)||(34877140-34877200)
chr1 (223-271)||(38664400-38664448)
chr1 (172-208)||(40754528-40754564)
chr1 (220-276)||(52382442-52382498)
[»] chr7 (38 HSPs)
chr7 (172-282)||(37264261-37264371)
chr7 (221-282)||(25778741-25778802)
chr7 (219-276)||(38589729-38589786)
chr7 (177-276)||(30659535-30659634)
chr7 (176-276)||(5068353-5068453)
chr7 (172-276)||(28333119-28333223)
chr7 (172-276)||(37496452-37496556)
chr7 (220-282)||(32972067-32972129)
chr7 (183-282)||(46288480-46288579)
chr7 (223-276)||(2846731-2846784)
chr7 (221-282)||(9602858-9602919)
chr7 (221-282)||(9830429-9830490)
chr7 (219-276)||(32775978-32776035)
chr7 (182-271)||(31581503-31581592)
chr7 (220-276)||(34064211-34064267)
chr7 (219-274)||(14648976-14649031)
chr7 (223-282)||(29257546-29257605)
chr7 (223-282)||(38181923-38181982)
chr7 (161-276)||(3667932-3668047)
chr7 (161-248)||(23111613-23111700)
chr7 (167-208)||(1102065-1102106)
chr7 (220-276)||(2849251-2849307)
chr7 (223-271)||(33584562-33584610)
chr7 (220-276)||(36070101-36070157)
chr7 (220-276)||(39343726-39343782)
chr7 (223-270)||(5724768-5724815)
chr7 (176-276)||(8149911-8150011)
chr7 (219-276)||(18731437-18731491)
chr7 (223-282)||(29434629-29434688)
chr7 (224-282)||(7425927-7425985)
chr7 (220-270)||(30462656-30462706)
chr7 (223-276)||(23186198-23186251)
chr7 (221-270)||(39498671-39498720)
chr7 (223-276)||(44604532-44604585)
chr7 (223-276)||(45890892-45890945)
chr7 (219-248)||(47238212-47238241)
chr7 (223-271)||(30463015-30463063)
chr7 (172-208)||(40023849-40023885)
[»] chr2 (40 HSPs)
chr2 (161-275)||(31348448-31348562)
chr2 (219-282)||(43427135-43427198)
chr2 (172-282)||(13222017-13222126)
chr2 (219-282)||(4794568-4794631)
chr2 (219-276)||(6075493-6075550)
chr2 (219-282)||(2427355-2427418)
chr2 (219-282)||(19515876-19515939)
chr2 (232-282)||(26273767-26273817)
chr2 (221-282)||(3199895-3199956)
chr2 (220-276)||(1908549-1908605)
chr2 (220-276)||(2756670-2756726)
chr2 (175-276)||(33880110-33880210)
chr2 (220-276)||(37529126-37529182)
chr2 (221-276)||(6685718-6685773)
chr2 (220-282)||(3487390-3487452)
chr2 (220-282)||(6972589-6972651)
chr2 (172-276)||(31592499-31592602)
chr2 (220-282)||(44424312-44424374)
chr2 (221-282)||(18181262-18181323)
chr2 (172-270)||(38872981-38873079)
chr2 (181-282)||(5425814-5425915)
chr2 (220-276)||(14384333-14384389)
chr2 (220-276)||(24356107-24356163)
chr2 (223-271)||(30757628-30757676)
chr2 (172-248)||(928619-928694)
chr2 (220-275)||(9472418-9472473)
chr2 (172-276)||(14887763-14887867)
chr2 (223-270)||(23684958-23685005)
chr2 (220-275)||(24451780-24451835)
chr2 (223-270)||(28301433-28301480)
chr2 (223-282)||(41436078-41436137)
chr2 (220-275)||(43182270-43182325)
chr2 (220-282)||(10069634-10069696)
chr2 (220-282)||(39095627-39095689)
chr2 (223-276)||(28108430-28108483)
chr2 (226-282)||(3100402-3100458)
chr2 (220-264)||(5007609-5007653)
chr2 (220-276)||(7931551-7931607)
chr2 (232-276)||(11726777-11726821)
chr2 (219-271)||(44736714-44736766)
[»] chr5 (40 HSPs)
chr5 (161-282)||(15898129-15898249)
chr5 (161-268)||(4194577-4194684)
chr5 (220-282)||(39212601-39212663)
chr5 (172-282)||(72155-72265)
chr5 (169-282)||(39061004-39061117)
chr5 (171-282)||(13016413-13016525)
chr5 (223-282)||(35334576-35334635)
chr5 (161-276)||(42818841-42818955)
chr5 (223-276)||(11099533-11099586)
chr5 (221-282)||(15254762-15254823)
chr5 (219-276)||(25111204-25111261)
chr5 (219-276)||(25170295-25170352)
chr5 (220-276)||(19889589-19889645)
chr5 (221-276)||(5357873-5357928)
chr5 (223-282)||(17243004-17243063)
chr5 (180-276)||(31090260-31090356)
chr5 (231-282)||(36446737-36446788)
chr5 (221-276)||(43525475-43525530)
chr5 (220-282)||(6173030-6173092)
chr5 (172-282)||(13087791-13087902)
chr5 (220-282)||(39183677-39183739)
chr5 (219-276)||(25108568-25108625)
chr5 (219-276)||(25167660-25167717)
chr5 (219-276)||(36006948-36007005)
chr5 (221-282)||(36469144-36469205)
chr5 (220-276)||(7871310-7871365)
chr5 (227-282)||(146750-146805)
chr5 (223-282)||(8369746-8369805)
chr5 (223-282)||(35646139-35646198)
chr5 (223-282)||(42575688-42575747)
chr5 (229-282)||(15564938-15564991)
chr5 (221-282)||(16283637-16283698)
chr5 (221-270)||(32539659-32539708)
chr5 (223-276)||(33012353-33012406)
chr5 (223-271)||(4412382-4412430)
chr5 (220-276)||(5072946-5073002)
chr5 (223-267)||(15814660-15814703)
chr5 (172-208)||(20369223-20369259)
chr5 (223-267)||(22582936-22582980)
chr5 (232-276)||(25344794-25344838)
[»] scaffold0221 (1 HSPs)
scaffold0221 (219-282)||(10840-10903)
[»] scaffold0058 (1 HSPs)
scaffold0058 (223-276)||(14455-14508)
[»] scaffold0005 (1 HSPs)
scaffold0005 (175-208)||(55271-55304)
[»] scaffold0028 (1 HSPs)
scaffold0028 (231-282)||(26620-26671)
[»] scaffold0006 (1 HSPs)
scaffold0006 (223-282)||(229822-229881)
[»] scaffold0654 (1 HSPs)
scaffold0654 (220-273)||(2716-2769)
[»] scaffold0086 (1 HSPs)
scaffold0086 (223-276)||(5817-5870)
[»] scaffold0045 (1 HSPs)
scaffold0045 (223-276)||(26321-26374)
[»] scaffold0020 (1 HSPs)
scaffold0020 (186-276)||(171188-171278)
[»] scaffold0003 (1 HSPs)
scaffold0003 (219-276)||(352516-352573)
[»] scaffold0001 (1 HSPs)
scaffold0001 (223-276)||(394777-394830)
[»] scaffold0685 (1 HSPs)
scaffold0685 (220-276)||(6455-6511)
[»] scaffold0578 (1 HSPs)
scaffold0578 (220-264)||(4025-4069)
[»] scaffold0007 (1 HSPs)
scaffold0007 (223-271)||(230255-230303)


Alignment Details
Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 18 - 282
Target Start/End: Complemental strand, 32232037 - 32231769
Alignment:
Q  18 aaaaagccttattaaactcccatcttcataagtccttatgaaccataggttgtg----atactactgatcgagtttttgtgtttgtatttaggaaattat 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  32232037 aaaaagccttattaaactcccatcttcataggtccttatgaaccataggttgtgtgtgatactactgatcgagtttttgtgtttgtatttaggaaattat 32231938  T
Q  114 atgagatactccctccattccataattctaagtcatttatnnnnnnntattgttctagaaaaattgactcatttcactttttaatataatattaagtann 213  Q
    ||||||||||||||||||||||||||||| ||||||||||       |||||| | | ||||||||||||||||||||||| |||| |||||||| ||      
T  32231937 atgagatactccctccattccataattctgagtcatttataaaaaaatattgtcccaaaaaaattgactcatttcacttttcaatacaatattaattact 32231838  T
Q  214 nnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
         |||||||||||||||||||||| |||||||  |||| ||||||||||||||| ||||| |||||    
T  32231837 tttttccaattataacactaattaataatactttcaccactcccaattcaatatattttactttgcatt 32231769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 14689897 - 14690018
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | |||||||||||| |||||||||||| |||| |||||||| ||       ||||||||||||||||||||||||||||||  |||| |||||    
T  14689897 tattgtcccagaaaaattgacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactcccaat 14689996  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  14689997 tcaatatattctactttgcatt 14690018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 2195416 - 2195526
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| |||| || | ||| ||       ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  2195416 aaaaattgacccatttcacttttcaatacaacaataattacttttttccaattataactctaattaatactactttcatcactcccaattcaatatattc 2195515  T
Q  272 tacttcgcatt 282  Q
    ||||| |||||    
T  2195516 tactttgcatt 2195526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 42412542 - 42412432
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||| |||||||||||||||||||||  |||||||| ||       ||||||||| | |||||||||||||||||| ||||| ||||||||||||||||    
T  42412542 aaaaactgactcatttcactttttaatgcaatattaattacttttttccaattatagctctaattaatactactttcatcactcccaattcaatatattc 42412443  T
Q  272 tacttcgcatt 282  Q
     |||| |||||    
T  42412442 cactttgcatt 42412432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 2796976 - 2797098
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnn-ccaattataacactaattaatactactttcgtcacttccaa 259  Q
    |||||||| | |||| |||||||||||||||||| |||| |||||||| ||        ||||||||||| |||||||||| ||||||| | ||| ||||    
T  2796976 tattgttcaaaaaaacttgactcatttcacttttcaatacaatattaattatttttttaccaattataactctaattaatattactttcattactcccaa 2797075  T
Q  260 ttcaatatattctacttcgcatt 282  Q
    ||||||||||||||||| |||||    
T  2797076 ttcaatatattctactttgcatt 2797098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 25174744 - 25174634
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| ||||||||||||| ||       |||| ||||||||||||||||| |||||||   |||  |||||||||||||||    
T  25174744 aaaaattgacccatttcacttttcaatataatattaattacatttttccaactataacactaattaatattactttccctactctcaattcaatatattc 25174645  T
Q  272 tacttcgcatt 282  Q
    ||||| |||||    
T  25174644 tactttgcatt 25174634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 886609 - 886497
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatat 269  Q
    ||||||||||||||||||||||||| |||| |||||||| ||        ||||||||||||||||||||| ||||||  ||| |  |||||| ||||||    
T  886609 agaaaaattgactcatttcacttttcaatacaatattaattactttttttcaattataacactaattaatattacttttatcattctcaattcgatatat 886510  T
Q  270 tctacttcgcatt 282  Q
    ||||||| |||||    
T  886509 tctactttgcatt 886497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 7258479 - 7258416
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||| || |||||    
T  7258479 ccaattataactctaattaatactactttcatcactcccaattcaatatattctagtttgcatt 7258416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 14748877 - 14748755
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnn-ccaattataacactaattaatactactttcgtcacttccaa 259  Q
    |||||||| |||||||||||  ||||| |||||| |||| |||||||| ||        ||||||||||||||||||||||||||||||  || |  |||    
T  14748877 tattgttccagaaaaattgatccattttacttttcaatacaatattaattactttttttccaattataacactaattaatactactttcaccattctcaa 14748778  T
Q  260 ttcaatatattctacttcgcatt 282  Q
    ||||||||||||||||| |||||    
T  14748777 ttcaatatattctactttgcatt 14748755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 8418464 - 8418357
Alignment:
Q  172 aaaaattgactcatttcactttttaatataata---ttaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatata 268  Q
    ||||||||||||||||||||||| |||||||||   |||| ||        |||||||||| |||||||||||||||||| |||||  ||||||| ||||    
T  8418464 aaaaattgactcatttcacttttcaatataatagtattaattattttttttcaattataactctaattaatactactttcatcactctcaattcagtata 8418365  T
Q  269 ttctactt 276  Q
    ||||||||    
T  8418364 ttctactt 8418357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 8566576 - 8566493
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactac 244  Q
    |||||| |||||||||||||| |||||||||||| |||| |||||||| ||        |||||||||||||||||||||||||    
T  8566576 tattgtcctagaaaaattgacccatttcacttttcaatacaatattaattattttttttcaattataacactaattaatactac 8566493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 15559239 - 15559179
Alignment:
Q  222 attataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||| ||||||||||| |||||| ||||| | ||||||||||||||||||| |||||    
T  15559239 attataactctaattaataccactttcatcactcctaattcaatatattctactttgcatt 15559179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 37459287 - 37459408
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | ||||||||| |  ||||||||||||||||| |||||||| ||       | |||||||| ||||||| |||||||||||  |||| |||||    
T  37459287 tattgtcccagaaaaattaatccatttcactttttaatacaatattaattacttttttctaattataatactaattgatactactttcaccactcccaat 37459386  T
Q  261 tcaatatattctacttcgcatt 282  Q
    | ||||||||| |||| |||||    
T  37459387 ttaatatattcaactttgcatt 37459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 5392048 - 5392107
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||| |||| |||||    
T  5392048 ttataactctaattaatactactttcaacactcccaattcaatatattccactttgcatt 5392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 10729034 - 10728971
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||| |||| |||||||||||||||||  ||||| |||||||||||||||| |||| |||||    
T  10729034 ccaattgtaactctaattaatactactttaatcactcccaattcaatatattccactttgcatt 10728971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 33743712 - 33743828
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagta-nnnnnnnccaattataacactaattaatactactttcgtcacttccaa 259  Q
    |||||||| |||||||||||||||||| |||||| |||| |||||||| ||        || ||| || |||||||||||| ||||||| |||||  |||    
T  33743712 tattgttccagaaaaattgactcatttaacttttcaatacaatattaattattttttttcctattttaccactaattaatattactttcatcactcacaa 33743811  T
Q  260 ttcaatatattctactt 276  Q
    || ||||||||||||||    
T  33743812 tttaatatattctactt 33743828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 8394688 - 8394642
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatatta 207  Q
    |||||||||||||||||||||||||||||||||| | || |||||||    
T  8394688 tattgttctagaaaaattgactcatttcacttttcagtacaatatta 8394642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 27973797 - 27973735
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| ||||||||||||| |||||| | | |||||||||| |||||||||| |||||    
T  27973797 caattataaccctaattaatactattttcgttattcccaattcaatgtattctactttgcatt 27973735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 28031066 - 28031004
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| ||||||||||||| |||||| | | |||||||||| |||||||||| |||||    
T  28031066 caattataaccctaattaatactattttcgttattcccaattcaatgtattctactttgcatt 28031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 28791303 - 28791357
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||||||| ||||||||||||||||||   ||| ||||||||||||||||||    
T  28791303 ccaattataactctaattaatactactttcacaactcccaattcaatatattcta 28791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 38252546 - 38252493
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||| |||||||||||| ||| |||||||||||||||||| ||||    
T  38252546 ttataactctaatcaatactactttcatcatttccaattcaatatattccactt 38252493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 45421110 - 45421024
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactacttt 247  Q
    |||||| | ||| ||||| || |||||||||||| |||| |||||||| ||       |||||||||||||||||||||||||||||    
T  45421110 tattgtcccagataaattaacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactacttt 45421024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 41726476 - 41726573
Alignment:
Q  179 gactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||||| |||| |||||||| ||        ||||||||||  |||||||||||| ||||   ||| |||||||||||||||||||||    
T  41726476 gactcatttcacttttcaatacaatattaattactttttttcaattataactgtaattaatactaatttcacaactcccaattcaatatattctactt 41726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 2875198 - 2875135
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| |||||||||||||||||| |  ||   ||||||||||||||||||| |||||    
T  2875198 ccaattataactctaattaatactactttcattcctctaaattcaatatattctactttgcatt 2875135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 5962581 - 5962522
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| || |||| ||||| |||||||||||||||| |||| |||||    
T  5962581 ttataactctaattaatattaatttcatcactcccaattcaatatattccactttgcatt 5962522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 9734520 - 9734481
Alignment:
Q  169 tagaaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  9734520 tagaaaaattgacccatttcactttttaatacaatattaa 9734481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 17005945 - 17006003
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| ||||||||||||   ||| ||||| ||||||||||||||||||||| |||||    
T  17005945 aattataactctaattaatact---ttcatcactcccaattcaatatattctactttgcatt 17006003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 17571303 - 17571245
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| ||||||||||||   ||| ||||| ||||||||||||||||||||| |||||    
T  17571303 aattataactctaattaatact---ttcatcactcccaattcaatatattctactttgcatt 17571245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 21587276 - 21587335
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| || || |||||||||||| ||||| |||||||||||||||| |||| |||||    
T  21587276 ttataacgctgatcaatactactttcatcactcccaattcaatatattccactttgcatt 21587335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 33925192 - 33925133
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||   |||| ||||||||||||||| |||| |||||    
T  33925192 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatt 33925133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 39171542 - 39171601
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||| |||| |||||  ||||||||||||||| |||| |||||    
T  39171542 ttataactctaattaatactattttcatcactcacaattcaatatattccactttgcatt 39171601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 44615473 - 44615414
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| || |||| |||||  |||||||||||||||||||| |||||    
T  44615473 ttataactctaattaatattattttcatcactctcaattcaatatattctactttgcatt 44615414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 27868424 - 27868374
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||| ||| |  |||||||||||||||||||| |||||    
T  27868424 taattaatactactttcatcattctcaattcaatatattctactttgcatt 27868374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 15020680 - 15020729
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctacttcgcat 281  Q
    ||||||||| || |||| ||||| ||||||||||||||||||||| ||||    
T  15020680 taattaataataatttcatcactaccaattcaatatattctactttgcat 15020729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 17790174 - 17790125
Alignment:
Q  227 aacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||| || ||||  ||||||||| ||||||||||||||||    
T  17790174 aacactaattaatattattttcaccacttccaaatcaatatattctactt 17790125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 27987655 - 27987704
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||  ||||||||||||||||| |||||  ||||||||||||||    
T  27987655 aattataactataattaatactactttcatcactcacaattcaatatatt 27987704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 28044957 - 28045006
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||  ||||||||||||||||| |||||  ||||||||||||||    
T  28044957 aattataactataattaatactactttcatcactcacaattcaatatatt 28045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 29615797 - 29615850
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||  ||||||||||||||||| ||| | |||||||||||||||| ||||    
T  29615797 ttataactttaattaatactactttcatcattcccaattcaatatattccactt 29615850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 32967385 - 32967332
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||| |  ||||||||||||||| ||||    
T  32967385 ttataactctaattaatactactttcatcattctcaattcaatatattccactt 32967332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 44790530 - 44790477
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||||||||||  || | |||||||||||||||| ||||    
T  44790530 ttataactctaattaatactactttcaccattcccaattcaatatattccactt 44790477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 2349349 - 2349397
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||| |||||||  || ||||||||||||||||||    
T  2349349 ttataactctaattaatattactttcaacatttccaattcaatatattc 2349397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 11637148 - 11637192
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||    
T  11637148 taattaatactactttcaccactctcaattcaatatattctactt 11637192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 14117458 - 14117514
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| |||||||   |||| ||||||||||||||| ||||    
T  14117458 caattataactctaattaatattactttcacaactttcaattcaatatattcaactt 14117514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 29638297 - 29638353
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| |||||||  |||| | ||||||||||||| |||||    
T  29638297 caattataactctaattaatattactttcaccactcctaattcaatatattatactt 29638353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 33191017 - 33190969
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| ||||||| ||||||||||   ||||||||||||||||||||    
T  33191017 ttataactctaattagtactactttcacaacttccaattcaatatattc 33190969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 33826227 - 33826279
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattct 272  Q
    |||||||||| ||||| |||||||||||| ||| |  ||||||||||||||||    
T  33826227 caattataactctaatcaatactactttcatcattctcaattcaatatattct 33826279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 39998171 - 39998215
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||    
T  39998171 taattaatactactttcaccactctcaattcaatatattctactt 39998215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 38319858 - 38319969
Alignment:
Q  171 gaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||||||||||||||||| |||| |||||||| ||       |||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  38319858 gaaaaattgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcatcactctcaattcaatatatt 38319957  T
Q  271 ctacttcgcatt 282  Q
    |||||| |||||    
T  38319958 ctactttgcatt 38319969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 54217279 - 54217394
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    ||||||||||||||||||||||||||||| |||| |||| |||||||| ||       |||||||||||| |||||||||| ||||||  |||| |||||    
T  54217279 tattgttctagaaaaattgactcatttcatttttcaatacaatattaattacttttttccaattataacattaattaataccactttcaccactcccaat 54217378  T
Q  261 tcaatatattctactt 276  Q
    |||||||||| |||||    
T  54217379 tcaatatattatactt 54217394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 37316092 - 37315971
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||||  |||||||||||  |||||||||||| |||| |||||||| ||       ||||||||||||||||||||||||||||||  |||| |||||    
T  37316092 tattgtttcagaaaaattgatccatttcacttttcaatacaatattaattacatttttccaattataacactaattaatactactttcaccactcccaat 37315993  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||| ||||||||||| |||||    
T  37315992 tcaacatattctactttgcatt 37315971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 42132761 - 42132871
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||||  |||||| ||| |||| |||||||| ||       |||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  42132761 aaaaattgacttgtttcacatttcaatacaatattaattacttttttccaattataacactaattaatattactttcaccacttccaattcaatatattc 42132860  T
Q  272 tacttcgcatt 282  Q
    ||||| |||||    
T  42132861 tactttgcatt 42132871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 17236993 - 17237101
Alignment:
Q  174 aaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||||  ||||||||||| ||||||||||||| ||        |||||||||| |||||||||||||||||| || ||| ||||||||||||||| |    
T  17236993 aaattgaccaatttcacttttcaatataatattaattaatttttttcaattataactctaattaatactactttcatcgctttcaattcaatatattcca 17237092  T
Q  274 cttcgcatt 282  Q
    ||| |||||    
T  17237093 ctttgcatt 17237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 20964399 - 20964337
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||||||||||| |||||    
T  20964399 caattataagactaattaatactactttcaccacttccaattcgatatattctactttgcatt 20964337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 36047262 - 36047149
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaagtannnnnnn-ccaattataacactaattaatactactttcgtcacttccaattcaatata 268  Q
    ||||||||||||||||||||||||| |||| |||||||| ||        |||| ||||||| ||||||||| |||||||  ||||  ||||||||||||    
T  36047262 agaaaaattgactcatttcacttttcaatacaatattaattactttttttccaactataacattaattaatattactttcaccactctcaattcaatata 36047163  T
Q  269 ttctacttcgcatt 282  Q
    |||||||| |||||    
T  36047162 ttctactttgcatt 36047149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 42024309 - 42024250
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  42024309 ttataactataattaatactactttcatcacttccaattcaatatattccactttgcatt 42024250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 9052162 - 9052105
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||||||||||||||||||| ||| |   |||||||||||||||||||    
T  9052162 ccaattataacactaattaatactactttcatcattctgaattcaatatattctactt 9052105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 25149446 - 25149503
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||| ||||    
T  25149446 ccaattataactctaattaatactactttcacaacttccaattcaatatattccactt 25149503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 51572338 - 51572289
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  51572338 aattataactctaattaatactacttttatcacttccaattcaatatatt 51572289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 10099836 - 10099780
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| ||||||||||||||||||   ||| |||||||||||||||||||||    
T  10099836 caattataactctaattaatactactttcacaactcccaattcaatatattctactt 10099780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 29550838 - 29550782
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| ||||||||||||||||||   ||| |||||||||||||||||||||    
T  29550838 caattataactctaattaatactactttcacaactcccaattcaatatattctactt 29550782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 22872500 - 22872437
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| |||||||||| ||||||| |||||  ||||||||||||||| |||| |||||    
T  22872500 ccaattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatt 22872437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 29990640 - 29990527
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    ||||||| || ||||||||| ||||||||||||||||||||||| |||  |        ||||||||||  |||||||||||| |||  |||||| ||||    
T  29990640 tattgttttacaaaaattgattcatttcactttttaatataataataa--atttttattcaattataactttaattaatactatttttttcactttcaat 29990543  T
Q  261 tcaatatattctactt 276  Q
    ||||||||||| ||||    
T  29990542 tcaatatattcaactt 29990527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 39976498 - 39976439
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| ||||||||||||||| |||||  ||||||||||||||| |||| |||||    
T  39976498 ttataacactgattaatactactttcatcactctcaattcaatatattccactttgcatt 39976439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 41710252 - 41710193
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||||| |||| |||||    
T  41710252 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatt 41710193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 49306586 - 49306645
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| ||||| | |||||||||||||| |||| |||||    
T  49306586 ttataactctaattaatactactttcatcactcctaattcaatatattccactttgcatt 49306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 16493403 - 16493345
Alignment:
Q  224 tataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||| |||||||||| ||||||| | |||||||||||||||||||| |||| |||||    
T  16493403 tataactctaattaatattactttcataacttccaattcaatatattccactttgcatt 16493345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 28330790 - 28330852
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||| |||||||  |||| ||||||||||||| ||| ||| |||||    
T  28330790 caattataacactaattaatattactttcaccactcccaattcaatataatctgctttgcatt 28330852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 4360567 - 4360457
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||||||  ||||||||||| |||| || ||||| ||       |||| |||||| |||||||||||||||||| ||| |  |||||||||||||||    
T  4360567 aaaaattgaccaatttcacttttcaatacaacattaattacttttttccaaatataactctaattaatactactttcatcattcacaattcaatatattc 4360468  T
Q  272 tacttcgcatt 282  Q
     |||| |||||    
T  4360467 cactttgcatt 4360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 14784426 - 14784459
Alignment:
Q  175 aattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||||||||||||||    
T  14784426 aattgactcatttcactttttaatataatattaa 14784459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 38976990 - 38977043
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||| || ||||||||||||||| ||||    
T  38976990 ttataactctaattaatactactttcatcattttcaattcaatatattccactt 38977043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 39053009 - 39052956
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||||||||||  ||||  ||||||||||||||||||||    
T  39053009 ttataactctaattaatactactttcaccactctcaattcaatatattctactt 39052956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 39979779 - 39979832
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||| ||||||| ||| |||||||||||||||||| ||||    
T  39979779 ttataactctaattaatattactttcatcatttccaattcaatatattccactt 39979832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 41203736 - 41203789
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||  |||||| ||||||||||||||| ||||    
T  41203736 ttataactctaattaatactacttttatcactttcaattcaatatattccactt 41203789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 41436478 - 41436539
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||||||||||||||| ||| |  |||||||| ||||||||||| |||||    
T  41436478 aattataactctaattaatactactttcatcattcgcaattcaaaatattctactttgcatt 41436539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 44633152 - 44633208
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||  ||||| ||||||||||| ||||||||    
T  44633152 ccaattataactctaattaatactactttcaccactttcaattcaatat-ttctactt 44633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 47846896 - 47846945
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||| |||||||||||||||||| ||||| | |||||||||||||    
T  47846896 aattataactctaattaatactactttcatcactcctaattcaatatatt 47846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 49448838 - 49448899
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||||||||||||||| ||| |  |||||||||||||| ||||| |||||    
T  49448838 aattataactctaattaatactactttcatcattctcaattcaatatattatactttgcatt 49448899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 29815205 - 29815157
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||| |||||||  |||||||||||||||||||||    
T  29815205 ttataactctaattaatattactttcaccacttccaattcaatatattc 29815157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 40021059 - 40021007
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattct 272  Q
    |||||||||| ||||||||||||||| || ||||| |||||| ||||||||||    
T  40021059 caattataactctaattaatactactgtcatcactcccaatttaatatattct 40021007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 49401652 - 49401708
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| || ||||||||||| |||||| | | |||||||||||||||||||||||    
T  49401652 caattatgactctaattaataccactttcataatttccaattcaatatattctactt 49401708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 55360459 - 55360403
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| ||||||| |||||  |||||||||||||| |||||    
T  55360459 caattataactctaattaatattactttcatcactctcaattcaatatattgtactt 55360403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 1796350 - 1796291
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||| |||||||||||   |||||||||||||||||||| |||| |||||    
T  1796350 ttataactctaatttatactactttcacaacttccaattcaatatattccactttgcatt 1796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 3686010 - 3686069
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| ||||||| |||||  ||||||||||||||| |||| |||||    
T  3686010 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatt 3686069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 4357567 - 4357614
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  4357567 ttataactctaattaatactattttcatcactcccaattcaatatatt 4357614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 8759778 - 8759837
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||||||||||| || ||||   ||| ||||||||||||||||||||| |||||    
T  8759778 ttataacactaattaataataatttcacaactcccaattcaatatattctactttgcatt 8759837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 22020622 - 22020559
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| ||||||| ||||||||||  || |  |||||||||||||||||||| |||||    
T  22020622 ccaattataactctaattattactactttcaccattctcaattcaatatattctactttgcatt 22020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 42185904 - 42185857
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  42185904 ttataactctaattaatactactttcatcactctcaattcaatatatt 42185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 42738502 - 42738455
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaa 208  Q
    |||||| ||| ||||||||||||||||||||||| |||| ||||||||    
T  42738502 tattgtcctaaaaaaattgactcatttcacttttcaatacaatattaa 42738455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 54729591 - 54729533
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| |||| | ||||||||||||||| |||| |||||    
T  54729591 ttataactctaattaatactactttcatcacct-caattcaatatattccactttgcatt 54729533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 28279790 - 28279889
Alignment:
Q  177 ttgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||||||| |||| || ||||| ||        |||||||||| ||||||||||||| ||||    ||||||||| ||||||||||||||    
T  28279790 ttgactcatttcacttttcaatacaacattaattactttttttcaattataactctaattaatactattttcactgcttccaattaaatatattctactt 28279889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 43335193 - 43335078
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||||||| || || ||| | ||||||||||| |||| |||||||| ||        ||||||| ||  ||||||||||||||||| |||||  ||||    
T  43335193 tattgttctaaaataactgatttatttcacttttcaatacaatattaattactttttatcaattatgactataattaatactactttcttcactctcaat 43335094  T
Q  261 tcaatatattctactt 276  Q
    ||||||||||| ||||    
T  43335093 tcaatatattccactt 43335078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 5499540 - 5499487
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||| || |||||||||| ||||||| ||||| | ||||||||||||||||    
T  5499540 caattatgactctaattaatattactttcatcactcctaattcaatatattcta 5499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 29644354 - 29644407
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||  ||||||||||||||||| ||| |  ||||||||||||||||||||    
T  29644354 ttataactataattaatactactttcatcattctcaattcaatatattctactt 29644407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 34791060 - 34791007
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||| ||  |||||  ||||||||||||||||||||    
T  34791060 ttataactctaattaatactacatttatcactctcaattcaatatattctactt 34791007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 35998225 - 35998172
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||||||||||  ||||  |||||||||||||| |||||    
T  35998225 ttataactctaattaatactactttcaccactctcaattcaatatattttactt 35998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 46958717 - 46958774
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||  | |||||||||||||||  |||||  ||||||||||||||||||||    
T  46958717 ccaattataattcaaattaatactactttaatcactctcaattcaatatattctactt 46958774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 49218939 - 49218837
Alignment:
Q  175 aattgactcatttcactttttaatataatattaagtannnnnnnc-caattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    |||||||||||||||||||| |||| |||||||| ||         ||||||||||| ||||||||| |||||||  ||||  |||||||||||||| ||    
T  49218939 aattgactcatttcacttttcaatacaatattaattacttttttttcaattataacattaattaatattactttcaccactctcaattcaatatattata 49218840  T
Q  274 ctt 276  Q
    |||    
T  49218839 ctt 49218837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 18509454 - 18509498
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||| ||||||| ||||| ||||||||||||||| |||||    
T  18509454 taattaataatactttcatcactcccaattcaatatattatactt 18509498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 25250705 - 25250649
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    ||||||||||| ||||||||||||| |||| |||||   |||| |||||||||||||    
T  25250705 ccaattataactctaattaatactagtttcatcactcttaatttaatatattctact 25250649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 27977145 - 27977205
Alignment:
Q  222 attataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||| ||||||||||  |||||| |||||  ||||||||||||||| |||| |||||    
T  27977145 attataactctaattaatatcactttcatcactctcaattcaatatattccactttgcatt 27977205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 32559162 - 32559210
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||||||||||| ||||| | |||| |||||||||    
T  32559162 ttataactctaattaatactactttcatcactcctaatttaatatattc 32559210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 40667701 - 40667737
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||  |||||||||||||||||||||||||    
T  40667701 aaaaattgaccaatttcactttttaatataatattaa 40667737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 15372033 - 15371912
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||||||||||| ||||||  ||||||||||| ||||| ||||| | ||       ||||||||||||||||||||||||||||||  |||| |||||    
T  15372033 tattgttctagaaatattgacctatttcacttttcaatattatatttattacttttttccaattataacactaattaatactactttcaccactcccaat 15371934  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  15371933 tcaatatattctactttgcatt 15371912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 2310449 - 2310349
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatat 269  Q
    ||||||||||||  ||||||||||| |||| |||||||| ||        ||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  2310449 agaaaaattgaccaatttcacttttcaatacaatattaattactttttttcaattataacattaattaatactactttcatcactcccaattcaatatat 2310350  T
Q  270 t 270  Q
    |    
T  2310349 t 2310349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 33018056 - 33017999
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||    
T  33018056 ccaattataactctaattaatactactttcaccactcccaattcaatatattctactt 33017999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 15321395 - 15321274
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | ||||| ||||| ||||||||| ||| ||||| ||||||| ||       | ||||||||||||||||||||||||||||  || |  ||||    
T  15321395 tattgtcccagaaatattgattcatttcacgtttcaatattatattaattacttttttctaattataacactaattaatactactttcaacattctcaat 15321296  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  15321295 tcaatatattctactttgcatt 15321274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 33921639 - 33921524
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | |||||||||||| |||||||||||  || | |||||||| ||       ||||||||||| |||||||||||||||||    ||| |||||    
T  33921639 tattgtcccagaaaaattgacccatttcactttccaaaacaatattaattacttttttccaattataactctaattaatactacttttacaactcccaat 33921540  T
Q  261 tcaatatattctactt 276  Q
    ||||||||||||||||    
T  33921539 tcaatatattctactt 33921524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 15325084 - 15325205
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| ||| ||| |||||  |||||||||||| ||||| ||||||| ||       |||||||||| |||||||||||||| ||||  ||||  ||||    
T  15325084 tattgtcctataaatattgatccatttcacttttcaatattatattaattacttttttccaattataatactaattaatactagtttcaccactctcaat 15325183  T
Q  261 tcaatatattctacttcgcatt 282  Q
     ||||||||||||||| |||||    
T  15325184 ccaatatattctactttgcatt 15325205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 15351553 - 15351440
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||||||||||| |||||   ||||||||||| ||||| ||||||| ||        |||||| ||||||||||||||||||||||  | ||  ||||    
T  15351553 tattgttctagaaatattgatcaatttcacttttcaatattatattaattactttttttcaattacaacactaattaatactactttcaccgctctcaat 15351454  T
Q  261 tcaatatattctac 274  Q
    ||||||||||||||    
T  15351453 tcaatatattctac 15351440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 30064057 - 30063998
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||||| |||| |||||    
T  30064057 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatt 30063998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 4552905 - 4552967
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||| |||||||  |||| |||||| ||||||||||| || |||||    
T  4552905 caattataacactaattaatattactttcaccactcccaatttaatatattctaatttgcatt 4552967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 28538992 - 28539054
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| ||||||||||| |||||| ||||||  |||| |||||||||||||| |||||    
T  28538992 caattataactctaattaataccactttcatcacttttaatttaatatattctactttgcatt 28539054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 15081422 - 15081475
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||||| ||||    
T  15081422 ttataactctaattaatactactttcataatttccaattcaatatattccactt 15081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 26356267 - 26356315
Alignment:
Q  222 attataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||  ||||||||||||||||| ||||||| |||||||||||||    
T  26356267 attataactttaattaatactactttcatcacttctaattcaatatatt 26356315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 2657908 - 2657947
Alignment:
Q  231 ctaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  2657908 ctaattaatattactttcatcacttccaattcaatatatt 2657947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 3604708 - 3604649
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| |||||||   |||||||||||||||||||| |||| |||||    
T  3604708 ttataactctaattaatattactttcacaacttccaattcaatatattccactttgcatt 3604649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 4552848 - 4552886
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  4552848 agaaaaattgactcatttcacttttcaatacaatattaa 4552886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 3166220 - 3166163
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||  || | |  ||||||||||||||||||    
T  3166220 ccaattataactctaattaatactactttcaccaatcctcattcaatatattctactt 3166163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 6787295 - 6787344
Alignment:
Q  224 tataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    |||||| |||||||| ||||||||| |||||| ||||| |||||||||||    
T  6787295 tataactctaattaaaactactttcatcactttcaattaaatatattcta 6787344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 31265778 - 31265831
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||| |||||||   |||||||||||||||||||| ||||    
T  31265778 ttataactctaattaatattactttcacaacttccaattcaatatattccactt 31265831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 117087 - 117131
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||    
T  117087 taattaatactactttcatcactctcaattcaatatattccactt 117131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 46194376 - 46194255
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | |||||||||||| |||||||||||| |||| |||||||| ||       ||||||||||||||||||||||||||||||  ||||  ||||    
T  46194376 tattgtcccagaaaaattgacccatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactctcaat 46194277  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  46194276 tcaatatattctactttgcatt 46194255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 1923085 - 1923148
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| |||||    
T  1923085 ccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatt 1923148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 39329920 - 39329799
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| ||| |||| |||||||||||||||||| |||| || | ||| ||       ||||||||||  |||||||||||||||||| |||||  ||||    
T  39329920 tattgtcctaaaaaagttgactcatttcacttttcaatacaacaataattacttttttccaattataattctaattaatactactttcatcactctcaat 39329821  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  39329820 tcaatatattctactttgcatt 39329799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 44219145 - 44219088
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||| |||| | |||||||||||||||||||||||||    
T  44219145 ccaattataactctaattaatactattttcattacttccaattcaatatattctactt 44219088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 21296611 - 21296552
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  21296611 ttataactctaattaatactactttcacaacttccaattcaatatattctactttgcatt 21296552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 42547265 - 42547165
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||||||||||||||||||| |||| || | ||| ||       | ||||||| | |||||||||||||||||| ||||| ||||||||||||||||    
T  42547265 aaaaattgactcatttcacttttcaatacaacaataattattttattcaaattatagctctaattaatactactttcatcactcccaattcaatatattc 42547166  T
Q  272 t 272  Q
    |    
T  42547165 t 42547165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 37041984 - 37041934
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  37041984 caattataactctaattaatactactttcatcatttccaattcaatatatt 37041934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 41031523 - 41031618
Alignment:
Q  175 aattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||| ||||||||||||| |||| |||||||| ||       ||| |||||||  ||||||||||||||||| ||| |||||||||||||||||    
T  41031523 aattgagtcatttcacttttcaatacaatattaattacttttttccatttataactttaattaatactactttcatcatttccaattcaatatatt 41031618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 50736054 - 50736153
Alignment:
Q  177 ttgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||| |||| |||| || ||||| ||       |||| |||||| ||||||||||||||||||   |||||||||||||||||||||||||    
T  50736054 ttgactcatttcagttttcaatagaacattaattacttttttccaactataactctaattaatactactttcactacttccaattcaatatattctactt 50736153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 50776801 - 50776702
Alignment:
Q  177 ttgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||| |||| |||| || ||||| ||       |||| |||||| ||||||||||||||||||   |||||||||||||||||||||||||    
T  50776801 ttgactcatttcagttttcaatagaacattaattacttttttccaactataactctaattaatactactttcactacttccaattcaatatattctactt 50776702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 52325173 - 52325235
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||||||||||||| |  ||||||||||||||| |||| |||||    
T  52325173 caattataactctaattaatactactttcgtcattctcaattcaatatattccactttgcatt 52325235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 1334889 - 1334836
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||    
T  1334889 ttataactctaattaatactactttcaccactcccaattcaatatattctactt 1334836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 15280604 - 15280657
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||    
T  15280604 ttataaccctaattaatactactttcatcactcccaattcaatatattccactt 15280657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 48409579 - 48409636
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||| |||||||||||    
T  48409579 ccaattataactctaattaatactactttcaccactcccaattcaacatattctactt 48409636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 30261661 - 30261556
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttcc-aattcaatatatt 270  Q
    |||||||||| |||||||||||| |||| |||| ||| ||       | ||||||||| |||||||||||||||||| ||||| || |||||||||||||    
T  30261661 aaaaattgacccatttcacttttcaatacaataataattactttttcctaattataactctaattaatactactttcatcactcccaaattcaatatatt 30261562  T
Q  271 ctactt 276  Q
    | ||||    
T  30261561 ccactt 30261556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 38600974 - 38600861
Alignment:
Q  162 attgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaatt 261  Q
    ||||||||| || |||||| ||||||||| ||| |||| |||||||| ||       ||| ||||||| |||||||||||||||||| ||||| ||| ||    
T  38600974 attgttctaaaataattgagtcatttcacctttcaatacaatattaattactcttt-ccatttataactctaattaatactactttcatcactcccagtt 38600876  T
Q  262 caatatattctactt 276  Q
    ||||||||| |||||    
T  38600875 caatatattatactt 38600861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 9218144 - 9218203
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| |||||  ||||||| |||||||||||| |||||    
T  9218144 ttataactctaattaatactactttcatcactctcaattcattatattctactttgcatt 9218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 54845624 - 54845565
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| | ||||| |||||||||||||| |||| |||||    
T  54845624 ttataactctaattaatactactttcattacttctaattcaatatattccactttgcatt 54845565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 21585522 - 21585468
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||||||| |||||||||| |||||||  |||||||||| ||||||||||||    
T  21585522 ccaattataactctaattaatattactttcaccacttccaatacaatatattcta 21585468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 53051021 - 53051078
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||   ||| ||||||||||||||| |||||    
T  53051021 ccaattataactctaattaatactactttcacaactcccaattcaatatattatactt 53051078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 47684766 - 47684810
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatat 267  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||||    
T  47684766 ttataactctaattaatactactttcatcactcccaattcaatat 47684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 26134811 - 26134764
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| ||||||| |||||||||| ||||| |||||||||||||||    
T  26134811 ttataactctaattagtactactttcatcactcccaattcaatatatt 26134764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 32023209 - 32023150
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| ||||||| |||||  ||||||||||||||| |||| |||||    
T  32023209 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatt 32023150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 32827412 - 32827365
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| ||| ||| |||||||||||||    
T  32827412 ttataactctaattaatactactttcatcatttctaattcaatatatt 32827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 43639624 - 43639577
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| ||||||||||||||||||   |||||||||||||||||||    
T  43639624 ttataactctaattaatactactttcacaacttccaattcaatatatt 43639577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 45392089 - 45392136
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||| ||||||| ||| |||||||||||||||||    
T  45392089 ttataactctaattaatattactttcatcatttccaattcaatatatt 45392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 54493907 - 54493954
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  54493907 ttataactctaattaatactactttcatcatttccaatttaatatatt 54493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 26832071 - 26832117
Alignment:
Q  224 tataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||| |||||||||||||||||| ||||| |||||| ||||||||    
T  26832071 tataactctaattaatactactttcatcactaccaatttaatatatt 26832117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 32977902 - 32977848
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||||||| ||||||||||||||||||   |||  |||||||||||||||||    
T  32977902 ccaattataactctaattaatactactttcacaactctcaattcaatatattcta 32977848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 36791034 - 36790996
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  36791034 agaaaaattgactcatttcacttttcaatacaatattaa 36790996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 45746362 - 45746424
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||||||||| |||||   || || ||||||||||||| |||||    
T  45746362 caattataactctaattaatactactttcatcactcttaactccatatattctactttgcatt 45746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 5245411 - 5245464
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||| |||||| |||||  ||||||||||||||| ||||    
T  5245411 ttataactctaattaataccactttcatcactctcaattcaatatattccactt 5245464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 29858977 - 29858920
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||  ||||||||||||||||||  ||||   |||||||||||||||||||    
T  29858977 ccaattataattctaattaatactactttcaccactcataattcaatatattctactt 29858920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 39365125 - 39365072
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||||| |||| ||| | |||||||||||||||| ||||    
T  39365125 ttataactctaattaatactattttcatcattcccaattcaatatattccactt 39365072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 47496166 - 47496215
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||| |||||||||||||||||| |||||   |||||||||||||    
T  47496166 aattataactctaattaatactactttcatcactcttaattcaatatatt 47496215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 54021558 - 54021513
Alignment:
Q  231 ctaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||||||||  |||| | |||||||||||||||||||    
T  54021558 ctaattaatactactttcaccactccgaattcaatatattctactt 54021513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 29756315 - 29756192
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnn--ccaattataacactaattaatactactttcgtcacttcca 258  Q
    |||||| |||||||||||||| |||||||||||| |||| |||||||| ||         ||||||||||||||||||||||||||||||  |||| |||    
T  29756315 tattgtcctagaaaaattgacccatttcacttttcaatacaatattaattacttttttttccaattataacactaattaatactactttcaccactccca 29756216  T
Q  259 attcaatatattctacttcgcatt 282  Q
    |||||||||||||||||| |||||    
T  29756215 attcaatatattctactttgcatt 29756192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 24131562 - 24131450
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatat 269  Q
    ||||||||||||| ||||||||||| |||  |||||||| ||       ||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  24131562 agaaaaattgacttatttcacttttcaatgcaatattaattacttttttccaattataacactaattaatactactttcaccactcccaattcaatatat 24131463  T
Q  270 tctacttcgcatt 282  Q
    | ||||| |||||    
T  24131462 tatactttgcatt 24131450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 26583676 - 26583786
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| |||| |||||||| ||       |||||||||||||||||||||| || |||| ||||| ||||||||||||||||    
T  26583676 aaaaattgacccatttcacttttcaatacaatattaattactttattccaattataacactaattaataatattttcatcactcccaattcaatatattc 26583775  T
Q  272 tacttcgcatt 282  Q
    || || |||||    
T  26583776 tattttgcatt 26583786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 29225705 - 29225811
Alignment:
Q  176 attgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    |||||| |||||||||||| |||| |||| ||| ||       ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  29225705 attgacccatttcacttttcaatacaataataattacttttttccaattataactctaattaatactactttcatcactcccaattcaatatattctact 29225804  T
Q  276 tcgcatt 282  Q
    | |||||    
T  29225805 ttgcatt 29225811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 2886108 - 2886229
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | |||||||||||   ||||||||||| |||| |||||||| ||       ||||||||||||||||||||||||||||||  ||||  ||||    
T  2886108 tattgtcccagaaaaattgatcaatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactctcaat 2886207  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  2886208 tcaatatattctactttgcatt 2886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 4466311 - 4466210
Alignment:
Q  175 aattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctac 274  Q
    |||||| ||||||||||||  |||| |||||||| ||       ||||||||||| ||||||||||||||||||  |||||||||| |||||||||||||    
T  4466311 aattgagtcatttcactttccaatacaatattaattatttttttccaattataactctaattaatactactttcaccacttccaatacaatatattctac 4466212  T
Q  275 tt 276  Q
    ||    
T  4466211 tt 4466210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 31798367 - 31798476
Alignment:
Q  173 aaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattct 272  Q
    |||||||||  ||||||||||| ||||||||||||| ||       |||||||||||||||||||||| |||||||   |||  ||||||||||||||||    
T  31798367 aaaattgacctatttcacttttcaatataatattaattacttttttccaattataacactaattaatattactttcactactctcaattcaatatattct 31798466  T
Q  273 acttcgcatt 282  Q
    |||| |||||    
T  31798467 actttgcatt 31798476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 10587743 - 10587631
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatat 269  Q
    ||||||||||||||||||  || || |||| |||||||| ||       | |||||||||||||||||||||||||||| |||||  |||||||||||||    
T  10587743 agaaaaattgactcattttcctcttaaatacaatattaattacttttttctaattataacactaattaatactactttcatcactctcaattcaatatat 10587644  T
Q  270 tctacttcgcatt 282  Q
    |||| || |||||    
T  10587643 tctattttgcatt 10587631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 33149269 - 33149331
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||| |||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||    
T  33149269 caataataacactaattaatactactttcatcactctcaattcaatatattctactttgcatt 33149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 36232902 - 36232845
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||||||||  || |||||||||||||||||||||||    
T  36232902 ccaattataactctaattaatactactttcaccatttccaattcaatatattctactt 36232845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 44580462 - 44580574
Alignment:
Q  170 agaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatat 269  Q
    ||||||||||||||||||||||||| |||| |||||| | ||       | |||||||||||||||||||| ||| |||  |||| | |||| |||||||    
T  44580462 agaaaaattgactcatttcacttttcaatacaatattcattattttttcctaattataacactaattaatattacattcaccactcctaatttaatatat 44580561  T
Q  270 tctacttcgcatt 282  Q
    ||||||| |||||    
T  44580562 tctactttgcatt 44580574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 35622891 - 35622829
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||||||||| | | | ||||||||||||||||||||| |||||    
T  35622891 caattataactctaattaatactactttcataattgccaattcaatatattctactttgcatt 35622829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 37925358 - 37925296
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||| |||||||  ||||  |||||||||||||||||||| |||||    
T  37925358 caattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatt 37925296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 37541228 - 37541169
Alignment:
Q  219 ccaattataacactaattaata--ctactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||| |||||||||  ||||||||  ||||||||||||||||||||||||||    
T  37541228 ccaattataacattaattaatatactactttcaccacttccaattcaatatattctactt 37541169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 46363582 - 46363461
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | ||||||||||| |  |||||||||| ||||||||||||| |        |||||||||||| ||||||||||||||| |  ||||  ||||    
T  46363582 tattgtcccagaaaaattgatttgtttcacttttcaatataatattaatttttttcttccaattataacaataattaatactacttccaccactctcaat 46363483  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||| ||||| |||||    
T  46363482 tcaatatattttactttgcatt 46363461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 2571358 - 2571421
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||| |||||| ||| |||||||||||||| |||||  |||||||||||||||||||| |||||    
T  2571358 ccaaatataactctagttaatactactttcatcactctcaattcaatatattctactttgcatt 2571421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 17724823 - 17724764
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||| |||| ||||| ||||||||||| ||||||||| |||||    
T  17724823 ttataactctaattaatactattttcatcactcccaattcaataaattctactttgcatt 17724764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 28839338 - 28839397
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||  ||||||||||||||||| ||||| |||||||||||||||| |||| |||||    
T  28839338 ttataactataattaatactactttcatcactcccaattcaatatattccactttgcatt 28839397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 51749292 - 51749233
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||||| |||| |||||    
T  51749292 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatt 51749233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 12267786 - 12267687
Alignment:
Q  177 ttgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||||||||||| ||||  | ||||| ||       ||||||||||| ||| ||||||||||||||   ||| |||||||||||||||||||||    
T  12267786 ttgactcatttcacttttcaatacgacattaattacttttttccaattataactctagttaatactactttcacaactcccaattcaatatattctactt 12267687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 29225578 - 29225464
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| ||| ||||||| || ||||||| |||  |||| |||||||| ||       ||||||||||| | ||| ||||||||||||  ||||||||||    
T  29225578 tattgtcctaaaaaaattaacccatttcattttccaatacaatattaattacttttttccaattataactcaaat-aatactactttcaccacttccaat 29225480  T
Q  261 tcaatatattctactt 276  Q
    ||||||||||||||||    
T  29225479 tcaatatattctactt 29225464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 28908092 - 28908145
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||| |||||||||||| |||||  ||||||||||||||||||||    
T  28908092 ttataactctaataaatactactttcatcactatcaattcaatatattctactt 28908145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 8327716 - 8327764
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||||||||||| |||||  |||||||||||||||    
T  8327716 ttataactctaattaatactactttcatcactctcaattcaatatattc 8327764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 11425981 - 11425925
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||  |||||||||||||||||   ||||||||| |||||||||||||||    
T  11425981 caattataactttaattaatactactttcactacttccaatacaatatattctactt 11425925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 14352562 - 14352618
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||  ||||||||| |||||||  |||| |||||||||||||||||||||    
T  14352562 caattataactgtaattaatattactttcaccactcccaattcaatatattctactt 14352618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 16040073 - 16040129
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||| ||||| |||||||  |||||||||| |||||||||||||||    
T  16040073 caattataactctaaataatattactttcaccacttccaatacaatatattctactt 16040129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 18186364 - 18186268
Alignment:
Q  173 aaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||||||||||||||| |||| |||||||  ||        |||||||||| ||||||||||||||||||  |||| |||||||| ||||||    
T  18186364 aaaattgactcatttcacttttcaatacaatattat-tactttttttcaattataactctaattaatactactttcaccactcccaattcagtatatt 18186268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 20988594 - 20988538
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| || ||||  |||| |||||||||||||||||||||    
T  20988594 caattataactctaattaatattattttcaccactcccaattcaatatattctactt 20988538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 27831840 - 27831904
Alignment:
Q  219 ccaattata-acactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| || |||||||||||||||||| ||||| |||||||||||| ||| |||| |||||    
T  27831840 ccaattatacactctaattaatactactttcatcactcccaattcaatatcttccactttgcatt 27831904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 3555664 - 3555605
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| ||  | |||||||||||||||| |||| |||||    
T  3555664 ttataactctaattaatactactttcatctatcccaattcaatatattccactttgcatt 3555605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 19349107 - 19349044
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| ||||||||||||||||||   |||  ||||||||||||||||| || |||||    
T  19349107 ccaattataaccctaattaatactactttcaaaactctcaattcaatatattctattttgcatt 19349044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 26755975 - 26756022
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| ||| || ||||||||||||||    
T  26755975 ttataactctaattaatactactttcatcattttcaattcaatatatt 26756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 27932946 - 27932883
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||| || |||  ||||  |||||||||||||||||||| |||||    
T  27932946 ccaattataatactaattaatacaaccttcaccactctcaattcaatatattctactttgcatt 27932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 46496017 - 46496076
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| ||||  | |||||||||||||| |||| |||||    
T  46496017 ttataactctaattaatactactttcatcacgcctaattcaatatattccactttgcatt 46496076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 8773241 - 8773299
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcat 281  Q
    ||||||| |||||||||||||||||| ||||||| | || ||||||||| |||| ||||    
T  8773241 ttataactctaattaatactactttcatcacttctagtttaatatattccactttgcat 8773299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 15290489 - 15290539
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||||  ||||||||| ||||||| |||||||| ||||||||||||    
T  15290489 caattataactataattaataatactttcatcacttcccattcaatatatt 15290539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 26040636 - 26040690
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||||||| |||||||||||| ||| |  ||||||||| |||||||||||||    
T  26040636 ccaattataactctaattaatactgcttccaccacttccaagtcaatatattcta 26040690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 2219557 - 2219504
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||| |||   ||||||||||||||||||| |||||    
T  2219557 ttataactctaattaatactacgttcacaacttccaattcaatatattttactt 2219504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 3718962 - 3718905
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||| |||||| |||||||||||||| ||| |||||  |||||||||||||| |||||    
T  3718962 ccaactataactctaattaatactaccttcatcactctcaattcaatatattatactt 3718905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 13500840 - 13500779
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||  ||||||||||||||||||  |||| |||||||||||| ||| |||| |||||    
T  13500840 aattataattctaattaatactactttcagcactcccaattcaatattttccactttgcatt 13500779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 37525051 - 37525103
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||||||||||||| |||||||| || ||||||||||||||| ||||    
T  37525051 ttataactctaattaatacta-tttcgtcattttcaattcaatatattccactt 37525103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 40061806 - 40061867
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||  |||||||||| ||||||| |||||  ||||||||||||||||| || |||||    
T  40061806 aattataattctaattaatattactttcatcactctcaattcaatatattctaatttgcatt 40061867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 1859455 - 1859491
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  1859455 aaaaattgactcatttcacttttcaatacaatattaa 1859491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 13409897 - 13409869
Alignment:
Q  172 aaaaattgactcatttcactttttaatat 200  Q
    |||||||||||||||||||||||||||||    
T  13409897 aaaaattgactcatttcactttttaatat 13409869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 17342826 - 17342874
Alignment:
Q  222 attataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||| |||||||||||||||||  |||||  ||||||||||||||    
T  17342826 attataactctaattaatactacttttatcactctcaattcaatatatt 17342874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 28706735 - 28706683
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    ||||||||| ||||||||||  |||||| ||||| | ||||||||||||||||    
T  28706735 aattataactctaattaatataactttcatcactgctaattcaatatattcta 28706683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 34877200 - 34877140
Alignment:
Q  222 attataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||| |||||||||| || |||| |||||  ||||||||||||||| |||| |||||    
T  34877200 attataactctaattaatattattttcatcactcacaattcaatatattcaactttgcatt 34877140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 38664400 - 38664448
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||||||||||| ||| | | ||||||||||||||    
T  38664400 ttataactctaattaatactactttcatcattcctaattcaatatattc 38664448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 40754564 - 40754528
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaa 208  Q
    |||||| | ||||||||||||||||||||||||||||    
T  40754564 aaaaatagtctcatttcactttttaatataatattaa 40754528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 52382498 - 52382442
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| |||||||  ||||  |||||||||||||| |||||    
T  52382498 caattataactctaattaatattactttcaccactctcaattcaatatattttactt 52382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 37264261 - 37264371
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| |||| |||||||| ||       | ||||||||| ||||||||||||||||||  |||| ||||||||||||||||    
T  37264261 aaaaattgacccatttcacttttcaatacaatattaattactttttcctaattataactctaattaatactactttcaccactcccaattcaatatattc 37264360  T
Q  272 tacttcgcatt 282  Q
    ||||| |||||    
T  37264361 tactttgcatt 37264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 25778741 - 25778802
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  25778741 aattataactctaattaatactactttcatcacttccaattcaatatattttactttgcatt 25778802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 38589729 - 38589786
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  38589729 ccaattataacactaattaatactactttcaccactcccaattcaatatattctactt 38589786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 30659634 - 30659535
Alignment:
Q  177 ttgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||| |||||||||||| |||| || ||||| ||       ||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||||    
T  30659634 ttgacccatttcacttttcaatacaacattaattacttttttccaattataactctaattaatactactttcaccacttcaaattcaatatattctactt 30659535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 5068453 - 5068353
Alignment:
Q  176 attgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    |||||||||||||||||||||||| |||| ||| ||       ||||||||||| |||||||||| |||||||  ||||   ||||||||||||||||||    
T  5068453 attgactcatttcactttttaatacaatactaattacttttttccaattataactctaattaatattactttcaccactcttaattcaatatattctact 5068354  T
Q  276 t 276  Q
    |    
T  5068353 t 5068353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 28333119 - 28333223
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||||| ||||||||||||| |||| || | ||| ||       |||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||    
T  28333119 aaaaattgattcatttcacttttcaatacaacaataattacttttttccaaatataactctaattaatattactttcatcactcccaattcaatatattc 28333218  T
Q  272 tactt 276  Q
    |||||    
T  28333219 tactt 28333223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 37496556 - 37496452
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| || | || ||||| ||       |||||||||||  ||||||||||||||||| |||||  |||||||||||||||    
T  37496556 aaaaattgacccatttcacttttcaacacaacattaattacttttttccaattataactttaattaatactactttcatcactctcaattcaatatattc 37496457  T
Q  272 tactt 276  Q
    |||||    
T  37496456 tactt 37496452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 32972129 - 32972067
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||| |||||||  ||||  |||||||||||||||||||| |||||    
T  32972129 caattataacactaattaataatactttcaccactcacaattcaatatattctactttgcatt 32972067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 46288579 - 46288480
Alignment:
Q  183 catttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||||| ||||||||||||| ||       ||  ||||||| |||||||||||||||||| | |||| ||||||||||||||| |||| |||||    
T  46288579 catttcacttttcaatataatattaattaattttttccctttataactctaattaatactactttcataactttcaattcaatatattccactttgcatt 46288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 2846784 - 2846731
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||    
T  2846784 ttataactctaattaatactactttcatcaattccaattcaatatattccactt 2846731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 9602858 - 9602919
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||||| |||||    
T  9602858 aattataacactaattaatactactttcaccactctcaattcaatatgttctactttgcatt 9602919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 9830429 - 9830490
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||||| |||||    
T  9830429 aattataacactaattaatactactttcaccactctcaattcaatatgttctactttgcatt 9830490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 32775978 - 32776035
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| |||| |||||||||||||  |||| |||||||||||||||||||||    
T  32775978 ccaattataactctaaataatactactttcaccactcccaattcaatatattctactt 32776035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 31581592 - 31581503
Alignment:
Q  182 tcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||||||||| |||| |||||||| ||       ||| ||||||| |||||||||||||||||| ||| || |||||||||||||||    
T  31581592 tcatttcacttttcaatacaatattaattacttttttccatttataactctaattaatactactttcatcattttcaattcaatatattc 31581503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 34064211 - 34064267
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| ||||||| |||||  ||||||||||||||||||||    
T  34064211 caattataactctaattaatattactttcatcactctcaattcaatatattctactt 34064267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 14649031 - 14648976
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctac 274  Q
    ||||||||||| |||||||||| ||||||| |||||  ||||||||||||||||||    
T  14649031 ccaattataactctaattaatattactttcatcactctcaattcaatatattctac 14648976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 29257546 - 29257605
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||||| |||| |||||    
T  29257546 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatt 29257605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 38181982 - 38181923
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||   |||||||||||||||||||||| || |||||    
T  38181982 ttataactctaattaatactactttcacaacttccaattcaatatattctattttgcatt 38181923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 3668047 - 3667932
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| ||| |||||||||| |||||||||||| |||| || | ||| ||       |||| |||||  |||||||||| ||||||| |||||  ||||    
T  3668047 tattgtcctaaaaaaattgacccatttcacttttcaatacaacaataattacttttttccaaatataattctaattaatattactttcatcactctcaat 3667948  T
Q  261 tcaatatattctactt 276  Q
    ||||||||||||||||    
T  3667947 tcaatatattctactt 3667932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 23111700 - 23111613
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttc 248  Q
    |||||| | ||||||||||  | |||| |||||| ||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  23111700 tattgtccgagaaaaattggttaattttacttttcaatataatattaattacttttttccaattataacactaattaatactactttc 23111613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 1102106 - 1102065
Alignment:
Q  167 tctagaaaaattgactcatttcactttttaatataatattaa 208  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  1102106 tctaaaaaaattgactcatttcactttttaatgtaatattaa 1102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 2849251 - 2849307
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||  ||||||||||||||||||  ||||  ||||||||||||||||||||    
T  2849251 caattataattctaattaatactactttcaccactctcaattcaatatattctactt 2849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 33584562 - 33584610
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||  ||||||||||||||||| ||||| ||||||||||||||||    
T  33584562 ttataactataattaatactactttcatcactcccaattcaatatattc 33584610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 36070101 - 36070157
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||| | |||||||||||||||||| |||||  ||||||| ||||||||||||    
T  36070101 caattatagctctaattaatactactttcatcactctcaattcagtatattctactt 36070157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 39343782 - 39343726
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| ||||||||||||| ||||  |||| | |||||||||||||||||||    
T  39343782 caattataactctaattaatactattttcaccactccaaattcaatatattctactt 39343726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 5724815 - 5724768
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| ||| ||| |||||||||||||    
T  5724815 ttataactctaattaatactactttcttcatttctaattcaatatatt 5724768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 8149911 - 8150011
Alignment:
Q  176 attgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    ||||| |||||||| |||| |||| |||||||| ||       ||||||||||| |||||||||| ||||||| ||||| | | ||| ||||||||||||    
T  8149911 attgattcatttcatttttcaatacaatattaattacttttttccaattataactctaattaatattactttcatcactactagttcgatatattctact 8150010  T
Q  276 t 276  Q
    |    
T  8150011 t 8150011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 18731437 - 18731491
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||||||||||||   |||  ||||||||||||||||||||||||||    
T  18731437 ccaattataactctaattaatact---ttcaccacttccaattcaatatattctactt 18731491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 29434688 - 29434629
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| ||| |  ||||||||||||||| |||| |||||    
T  29434688 ttataactctaattaatactactttcatcattcacaattcaatatattccactttgcatt 29434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 7425985 - 7425927
Alignment:
Q  224 tataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||| ||| ||||||||||||||   |||||||||||||||||||| |||| |||||    
T  7425985 tataactctagttaatactactttcacaacttccaattcaatatattccactttgcatt 7425927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 30462656 - 30462706
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||| ||||||||||||| |||| |||||  ||||||||||||||    
T  30462656 caattataactctaattaatactaatttcatcactctcaattcaatatatt 30462706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 23186251 - 23186198
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||| ||||||||  ||||| | |||||||||||||||||||    
T  23186251 ttataactctaattaacactacttttatcactccaaattcaatatattctactt 23186198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 39498671 - 39498720
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||  |||||||||| ||||||| ||||| |||||||||||||||    
T  39498671 aattataattctaattaatattactttcatcactcccaattcaatatatt 39498720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 44604585 - 44604532
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| |||||  ||| ||||||||||| ||||    
T  44604585 ttataactctaattaatactactttcatcactctcaactcaatatattccactt 44604532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 45890945 - 45890892
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||  ||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  45890945 ttataactataattaatattactttcatcatttccaattcaatatattttactt 45890892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 47238212 - 47238241
Alignment:
Q  219 ccaattataacactaattaatactactttc 248  Q
    ||||||||||||||||||||||||||||||    
T  47238212 ccaattataacactaattaatactactttc 47238241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 30463015 - 30463063
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||| ||||||| ||| || |||||||||||||||    
T  30463015 ttataactctaattaatattactttcatcattttcaattcaatatattc 30463063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 40023885 - 40023849
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  40023885 aaaaattgactcatttcacttttcaatacaatattaa 40023849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 31348448 - 31348562
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| |||||||||||||| ||||||| |||| |||| |||||||| ||       ||||||||||||||||||||||||||||||  || | | |||    
T  31348448 tattgtcctagaaaaattgacccatttcaattttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccattcctaat 31348547  T
Q  261 tcaatatattctact 275  Q
    |||||||||||||||    
T  31348548 tcaatatattctact 31348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 43427198 - 43427135
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || |||||    
T  43427198 ccaattataacactaattaatactactttcatcactcccaattcaatatattctattttgcatt 43427135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 13222017 - 13222126
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| |||| |||||||| ||        ||||||||||||||||||||| |||||||  ||||||||||||||||||||     
T  13222017 aaaaattgac-catttcacttttcaatacaatattaattattttttttcaattataacactaattaatattactttcaccacttccaattcaatatattt 13222115  T
Q  272 tacttcgcatt 282  Q
    ||||| |||||    
T  13222116 tactttgcatt 13222126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 4794568 - 4794631
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||| |||||    
T  4794568 ccaattataactctaattaatactactttcatcactttcaattcaatatattccactttgcatt 4794631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 6075493 - 6075550
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||    
T  6075493 ccaattataactctaattaatactactttcatcactcccaatttaatatattctactt 6075550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 2427355 - 2427418
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||  ||||||||||||||||  |||| ||||||||||||||||||||| |||||    
T  2427355 ccaattataacatcaattaatactactttcaccactcccaattcaatatattctactttgcatt 2427418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 19515876 - 19515939
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||| |||||||||||||||||| | |||| |||||||||||||| ||||| |||||    
T  19515876 ccaattataactctaattaatactactttcattacttacaattcaatatattttactttgcatt 19515939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 26273767 - 26273817
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  26273767 taattaatactactttcatcactcccaattcaatatattctactttgcatt 26273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 3199895 - 3199956
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| ||||||||||||||||||  |||| ||||||||||||||| ||||| |||||    
T  3199895 aattataactctaattaatactactttcaccactcccaattcaatatattatactttgcatt 3199956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 1908605 - 1908549
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| || ||||  ||||||||||||||||||||||||||    
T  1908605 caattataactctaattaatattattttcaccacttccaattcaatatattctactt 1908549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 2756670 - 2756726
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| ||||||||||||| || | |||||||||||| ||||||||||||||    
T  2756670 caattataactctaattaatactatttacatcacttccaatttaatatattctactt 2756726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 33880110 - 33880210
Alignment:
Q  175 aattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctac 274  Q
    |||||| |||||||||||||||||| |||||||| ||       ||  ||||||| |||||||||| |||||||  |||| |||||||||||||||||||    
T  33880110 aattgagtcatttcactttttaatacaatattaattactttttccct-ttataactctaattaatattactttcaccactcccaattcaatatattctac 33880208  T
Q  275 tt 276  Q
    ||    
T  33880209 tt 33880210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 37529182 - 37529126
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| |||||||  ||||||||||||||| ||||||||||    
T  37529182 caattataactctaattaatattactttcaccacttccaattcaatttattctactt 37529126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 6685773 - 6685718
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||  ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  6685773 aattataattctaattaatacaactttcaccacttccaattcaatatattctactt 6685718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 3487390 - 3487452
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| || |||||||||| ||||||| |||||  |||||||||||||||||||| |||||    
T  3487390 caattattactctaattaatattactttcatcactctcaattcaatatattctactttgcatt 3487452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 6972651 - 6972589
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||||||||||||| ||||||   ||||  |||||||||||||||||||| |||||    
T  6972651 caattataacactaattaatattacttttaccactctcaattcaatatattctactttgcatt 6972589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 31592499 - 31592602
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||||||||||||||||||| |||| |||| ||| ||       |||||||||||  ||||||||| || |||| |||||  |||||||||||||||    
T  31592499 aaaaattgactcatttcacttttcaatacaataataattacttttt-ccaattataactttaattaatattattttcatcactctcaattcaatatattc 31592597  T
Q  272 tactt 276  Q
    |||||    
T  31592598 tactt 31592602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 44424374 - 44424312
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||||||||| ||| |  ||||||||||||||| |||| |||||    
T  44424374 caattataactctaattaatactactttcatcattctcaattcaatatattcaactttgcatt 44424312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 18181323 - 18181262
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||||||||||||||| | | | ||||||||| ||||||||||| |||||    
T  18181323 aattataactctaattaatactactttcattattcccaattcaaaatattctactttgcatt 18181262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 38873079 - 38872981
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    |||||||||||||||||| ||||||||| |||||||| ||       || |||||||| ||||   |||||||||||  |||| |||||||||||||||    
T  38873079 aaaaattgactcatttcattttttaatacaatattaattacttttttccgattataactctaaccgatactactttcaccactcccaattcaatatatt 38872981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 5425814 - 5425915
Alignment:
Q  181 ctcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgca 280  Q
    |||||||||||||| |||| ||||||||  |       ||||||||||  |||| |||||||| |||| ||| | ||||||||||||||||| |||||||    
T  5425814 ctcatttcacttttcaatacaatattaataacttttttccaattataaatctaactaatactaatttcatcattcccaattcaatatattctgcttcgca 5425913  T
Q  281 tt 282  Q
    ||    
T  5425914 tt 5425915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 14384389 - 14384333
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||  |||||||||||||||||| |||||  |||||||||||||| |||||    
T  14384389 caattataattctaattaatactactttcttcactctcaattcaatatattatactt 14384333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 24356107 - 24356163
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| ||||||||||||||||||   ||| ||||||||| |||||||||||    
T  24356107 caattataactctaattaatactactttcacgactcccaattcaacatattctactt 24356163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 30757676 - 30757628
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||||||||||| ||| | ||||||||||||||||    
T  30757676 ttataactctaattaatactactttcatcattcccaattcaatatattc 30757628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 928694 - 928619
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttc 248  Q
    ||||||||||  |||| |||||||||||||||||||| ||       | ||||||||||||||||||||||||||||    
T  928694 aaaaattgaccaattttactttttaatataatattaattatttttttc-aattataacactaattaatactactttc 928619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 9472418 - 9472473
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    ||||||||||  |||||||||||||||||  ||||  |||||||||||||||||||    
T  9472418 caattataactataattaatactactttcaccactatcaattcaatatattctact 9472473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 14887763 - 14887867
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||||||||||| ||||||||| |||||||| ||       |||||||||||   ||||||||||| | |   |||  ||||||||||||||||    
T  14887763 aaaaattgactcatttcattttttaatacaatattaattacttttttccaattataacctcaattaatactattattaccacaaccaattcaatatattc 14887862  T
Q  272 tactt 276  Q
    |||||    
T  14887863 tactt 14887867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 23684958 - 23685005
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  23684958 ttataactctaattaatactactttcatcactctcaattcaatatatt 23685005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 24451780 - 24451835
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    |||||||||| |||||||||| |||||||  | |||||||| ||||||||||||||    
T  24451780 caattataactctaattaatattactttcaccccttccaatacaatatattctact 24451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 28301433 - 28301480
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  28301433 ttataactctaattaatactactttcatcactctcaattcaatatatt 28301480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 41436078 - 41436137
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| ||| |  ||||||||||||||| |||| |||||    
T  41436078 ttataactctaattaatactactttcatcattctcaattcaatatattccactttgcatt 41436137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 43182270 - 43182325
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctact 275  Q
    ||||||||||  |||||||||||| ||||  |||||||||||||||||||| ||||    
T  43182270 caattataactttaattaatactattttcaccacttccaattcaatatattatact 43182325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 10069696 - 10069634
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||| ||||| |||||||||| ||||||| |||||  ||||||||||||||| |||| |||||    
T  10069696 caatgataactctaattaataatactttcatcactctcaattcaatatattcgactttgcatt 10069634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 39095627 - 39095689
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||  ||||||||| ||||||| |||||  ||||||||||||||| |||| |||||    
T  39095627 caattataactttaattaatattactttcatcactgacaattcaatatattccactttgcatt 39095689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 28108483 - 28108430
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||| |  ||||||||||||||| ||||    
T  28108483 ttataactctaattaatactactttcatcattctcaattcaatatattccactt 28108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 3100402 - 3100458
Alignment:
Q  226 taacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||| ||||||||||||||||||   |||||||||| ||||||||| |||| |||||    
T  3100402 taactctaattaatactactttcacaacttccaatttaatatattccactttgcatt 3100458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 5007653 - 5007609
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaa 264  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||    
T  5007653 caattataactctaattaatactactttcatcactcccgattcaa 5007609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 7931607 - 7931551
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| ||||||||||||||||||   |||  |||||||||||||| |||||    
T  7931607 caattataactctaattaatactactttcacaactctcaattcaatatattttactt 7931551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 11726821 - 11726777
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||||||| |||||   |||||||||||||||||||    
T  11726821 taattaatactactttcatcactcttaattcaatatattctactt 11726777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 44736714 - 44736766
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||||||| |||||||||||||||||  |||||  | |||||||||||||    
T  44736714 ccaattataactctaattaatactacttttatcactctcgattcaatatattc 44736766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 15898129 - 15898249
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||||  ||||||||||||| ||||||||||| |||| |||||||| ||       | |||||||||||||||||||| |||||||  ||||  ||||    
T  15898129 tattgtttcagaaaaattgacttatttcacttttcaatacaatattaattacttttttc-aattataacactaattaatattactttcaccactctcaat 15898227  T
Q  261 tcaatatattctacttcgcatt 282  Q
    |||||||||||||||| |||||    
T  15898228 tcaatatattctactttgcatt 15898249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 4194577 - 4194684
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||| | ||||||||| || |||||||||||| |||| |||||||| ||        |||||||||||||||||||||||||||||  |||| |||||    
T  4194577 tattgtcccagaaaaattaacccatttcacttttcaatacaatattaattactttttttcaattataacactaattaatactactttcaccactcccaat 4194676  T
Q  261 tcaatata 268  Q
    ||||||||    
T  4194677 tcaatata 4194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 39212663 - 39212601
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||||||||| || || ||||||||||||||||||||| |||||    
T  39212663 caattataactctaattaatactactttcatcgctcccaattcaatatattctactttgcatt 39212601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 72265 - 72155
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    |||||||||| |||||||||||| |||| |||| ||| ||       ||||||||||  |||||||||||||||||| ||||| | |||| |||||||||    
T  72265 aaaaattgacccatttcacttttcaatacaataataattactttttcccaattataaatctaattaatactactttcatcactcctaatttaatatattc 72166  T
Q  272 tacttcgcatt 282  Q
    ||||| |||||    
T  72165 tactttgcatt 72155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 39061117 - 39061004
Alignment:
Q  169 tagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatata 268  Q
    |||||||||||| ||||||||||||| |||| |||||||| ||         |||||||||| ||||||||| |||||||  |||| | |||||||||||    
T  39061117 tagaaaaattgattcatttcacttttcaatacaatattaattaaatttttttaattataacattaattaatattactttcaccactcctaattcaatata 39061018  T
Q  269 ttctacttcgcatt 282  Q
    |||||||| |||||    
T  39061017 ttctactttgcatt 39061004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 13016525 - 13016413
Alignment:
Q  171 gaaaaattgactcatttcactttttaatataatattaagtannnnnnnc-caattataacactaattaatactactttcgtcacttccaattcaatatat 269  Q
    |||||||||||||||||||||||| |||| |||||||| ||         | ||||||| ||||||||||| |||||||  |||| ||||||||||||||    
T  13016525 gaaaaattgactcatttcacttttcaatacaatattaattacttttttttcgattataaaactaattaatattactttcaccactcccaattcaatatat 13016426  T
Q  270 tctacttcgcatt 282  Q
    ||||||| |||||    
T  13016425 tctactttgcatt 13016413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 35334635 - 35334576
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||| |||| |||||    
T  35334635 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgcatt 35334576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 42818841 - 42818955
Alignment:
Q  161 tattgttctagaaaaattgactcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaat 260  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||||||| ||        |||||||||| ||||||||||||| ||||  ||| ||  ||    
T  42818841 tattgttccagaaaaattgacctatttcacttttcaatataatattaattactttttttcaattataactctaattaatactattttcaccac-tctcat 42818939  T
Q  261 tcaatatattctactt 276  Q
    ||||||||||||||||    
T  42818940 tcaatatattctactt 42818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 11099586 - 11099533
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||    
T  11099586 ttataactctaattaatactactttcatcactcccaattcaatatattccactt 11099533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 15254762 - 15254823
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||||||| ||||||| |||||| ||||||||||||||||| || |||||    
T  15254762 aattataactctaattaatattactttcatcactttcaattcaatatattctaatttgcatt 15254823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 25111261 - 25111204
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||||||||||    
T  25111261 ccaattataattttaattaatactactttcaccacttccaattcaatatattctactt 25111204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 25170352 - 25170295
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||||||||||    
T  25170352 ccaattataattttaattaatactactttcaccacttccaattcaatatattctactt 25170295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 19889645 - 19889589
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| |||||||  ||||| ||||||||||||||||||||    
T  19889645 caattataactctaattaatattactttcaccactttcaattcaatatattctactt 19889589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 5357928 - 5357873
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||| |||||||||| |||||||  |||||||||| |||||||||||||||    
T  5357928 aattataactctaattaatattactttcaccacttccaatacaatatattctactt 5357873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 17243063 - 17243004
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||| |||| |||||    
T  17243063 ttataactctaattaatactactttcatcactctcaattcaatatattccactttgcatt 17243004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 31090260 - 31090356
Alignment:
Q  180 actcatttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||||| |||| |||||||| ||        |||| ||||||||||||||||||||||||  ||||  |||||| |||||||||||||    
T  31090260 actcatttcacttttcaatacaatattaattactttttttcaatcataacactaattaatactactttcaacactctcaattccatatattctactt 31090356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 36446788 - 36446737
Alignment:
Q  231 ctaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||| |||||    
T  36446788 ctaattaatactactttcatcactttcaattcaatatattatactttgcatt 36446737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 43525475 - 43525530
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||| ||||||||||||||||||  |||||||||||||| ||||| |||||    
T  43525475 aattataactctaattaatactactttcaccacttccaattcaacatattatactt 43525530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 6173092 - 6173030
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||||  ||||||||||||||||| |||||  |||||||||||||| ||||| |||||    
T  6173092 caattataactataattaatactactttcatcactcacaattcaatatattatactttgcatt 6173030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 13087902 - 13087791
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaagtannnnnnnc-caattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||||||||||||||||| |||| |||||||| ||         | ||||||| ||||||||||| |||||||  ||||  ||||||||||||||    
T  13087902 aaaaattgactcatttcacttttcaatacaatattaattacttttttttcgattataaaactaattaatattactttcaccactctcaattcaatatatt 13087803  T
Q  271 ctacttcgcatt 282  Q
    |||||| |||||    
T  13087802 ctactttgcatt 13087791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 39183739 - 39183677
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||| ||||||| |||||  ||||||||||||||| |||| |||||    
T  39183739 caattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatt 39183677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 25108568 - 25108625
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||| |||||    
T  25108568 ccaattataattttaattaatactactttcaccacttccaattcaatatattatactt 25108625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 25167660 - 25167717
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||| |||||    
T  25167660 ccaattataattttaattaatactactttcaccacttccaattcaatatattatactt 25167717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 36007005 - 36006948
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| |||||||||| || ||||  ||||||||||||| ||||||||||||    
T  36007005 ccaattataactctaattaatattattttcaccacttccaattcagtatattctactt 36006948  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 36469205 - 36469144
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||  |||||||||||||||||| ||||||  ||||||||||||| ||||| |||||    
T  36469205 aattataattctaattaatactactttcatcacttttaattcaatatattatactttgcatt 36469144  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 7871310 - 7871365
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||| |||||||||||||||||||  ||| ||||||| ||||||||||||||    
T  7871310 caattataatactaattaatactactttcaccac-tccaatttaatatattctactt 7871365  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 146805 - 146750
Alignment:
Q  227 aacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| |||||||||||||  |||||  |||||||||||||||||||| |||||    
T  146805 aacactacttaatactacttttatcactctcaattcaatatattctactttgcatt 146750  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 8369805 - 8369746
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||   |||| ||||||||||||||| |||| |||||    
T  8369805 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatt 8369746  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 35646198 - 35646139
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||   ||||| |||||||||||||| |||| |||||    
T  35646198 ttataactctaattaatactactttcacaacttctaattcaatatattccactttgcatt 35646139  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 42575747 - 42575688
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||  |||||||||||||||||   |||||||||||||||||||| |||| |||||    
T  42575747 ttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatt 42575688  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 15564991 - 15564938
Alignment:
Q  229 cactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||||| ||||||| |||||  ||||| |||||||||||||| |||||    
T  15564991 cactaattaatattactttcatcactctcaatttaatatattctactttgcatt 15564938  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 16283698 - 16283637
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||||| |||||| || |||||||| |||||  ||||||||||||||| |||| |||||    
T  16283698 aattataactctaattgatgctactttcatcactctcaattcaatatattccactttgcatt 16283637  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 32539659 - 32539708
Alignment:
Q  221 aattataacactaattaatactactttcgtcacttccaattcaatatatt 270  Q
    ||||||||| ||||||||||||| |||| |||||||| ||| ||||||||    
T  32539659 aattataactctaattaatactattttcatcacttccgatttaatatatt 32539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 33012353 - 33012406
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| ||| |||||||||||||| ||||| ||||||| |||||||| ||||    
T  33012353 ttataacgctagttaatactactttcatcactcccaattctatatattccactt 33012406  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 4412382 - 4412430
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| ||||||||||||| |||| ||| ||| ||||||||||||||    
T  4412382 ttataactctaattaatactattttcatcatttctaattcaatatattc 4412430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 5072946 - 5073002
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||||||||| | |  || ||||||||||||||| |||||    
T  5072946 caattataactctaattaatactacttccattgctcccaattcaatatattttactt 5073002  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 15814660 - 15814703
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatat 267  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||    
T  15814660 ttataactctaattaatactactttcatcac-tccaattcaatat 15814703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 20369223 - 20369259
Alignment:
Q  172 aaaaattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  20369223 aaaaattgactcatttcacttttcaatacaatattaa 20369259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 22582980 - 22582936
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatat 267  Q
    ||||||| ||||||||||||||||||   ||||||||||||||||    
T  22582980 ttataactctaattaatactactttcacaacttccaattcaatat 22582936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 25344838 - 25344794
Alignment:
Q  232 taattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||||||||| ||| |  ||||||||||||||||||||    
T  25344838 taattaatactactttcatcattctcaattcaatatattctactt 25344794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 10903 - 10840
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||| |||||||||||||||||||  |||| | ||||||||||||| ||||| |||||    
T  10903 ccaattataaaactaattaatactactttcaccactcctaattcaatatattttactttgcatt 10840  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 14455 - 14508
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| ||| || ||||||||||||||| ||||    
T  14455 ttataactctaattaatactactttcatcattttcaattcaatatattccactt 14508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 55304 - 55271
Alignment:
Q  175 aattgactcatttcactttttaatataatattaa 208  Q
    ||||||||||||||||||||||||||||||||||    
T  55304 aattgactcatttcactttttaatataatattaa 55271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 26620 - 26671
Alignment:
Q  231 ctaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    |||||||||||||||||| |||||  ||||||||||||||| |||| |||||    
T  26620 ctaattaatactactttcatcactcgcaattcaatatattccactttgcatt 26671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 229822 - 229881
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctacttcgcatt 282  Q
    ||||||| ||||||||||||||||||   |||||||||||||||||| | |||| |||||    
T  229822 ttataactctaattaatactactttcacaacttccaattcaatatataccactttgcatt 229881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 2769 - 2716
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattcta 273  Q
    |||||||||| ||||||||||||| |||| |||||  |||||||| ||||||||    
T  2769 caattataactctaattaatactaatttcatcactctcaattcaacatattcta 2716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 5817 - 5870
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||  |||||||||||||||||  ||||  ||||||||||||||||||||    
T  5817 ttataactttaattaatactactttcaccactctcaattcaatatattctactt 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 26321 - 26374
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||| ||||||  ||| |||||||||||||||||| ||||    
T  26321 ttataactctaattaatattacttttatcatttccaattcaatatattccactt 26374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 171188 - 171278
Alignment:
Q  186 ttcactttttaatataatattaagtannnnnnnccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||| ||||||||||||| ||        |||||||||| |  ||||||| ||||||| ||||| | |||||||||||||||||||    
T  171188 ttcacttttcaatataatattaattactttttttcaattataactcatattaatattactttcatcactcctaattcaatatattctactt 171278  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 352573 - 352516
Alignment:
Q  219 ccaattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||||||| ||| |||||| |||||||   ||| |||||||||||||||||||||    
T  352573 ccaattataactctatttaatattactttcactactcccaattcaatatattctactt 352516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 394777 - 394830
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    ||||||| |||||||||||||||||| |||||  ||||||| ||||||| ||||    
T  394777 ttataactctaattaatactactttcatcactctcaattcactatattccactt 394830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 6511 - 6455
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaatatattctactt 276  Q
    |||||||||| |||||||||| |||||||  ||||  |||||||||||||| |||||    
T  6511 caattataactctaattaatattactttcaccactctcaattcaatatattttactt 6455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 4025 - 4069
Alignment:
Q  220 caattataacactaattaatactactttcgtcacttccaattcaa 264  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||    
T  4025 caattataactctaattaatactactttcatcactcccgattcaa 4069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 230255 - 230303
Alignment:
Q  223 ttataacactaattaatactactttcgtcacttccaattcaatatattc 271  Q
    ||||||| |||||||||| |||||||   ||||||||||||||||||||    
T  230255 ttataactctaattaatattactttcacaacttccaattcaatatattc 230303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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