View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14579_low_40 (Length: 238)
Name: NF14579_low_40
Description: NF14579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14579_low_40 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4574756 - 4574534
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574756 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
4574657 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccannn |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574656 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccattt |
4574557 |
T |
|
| Q |
201 |
nnnncggatcagccagcaaactg |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4574556 |
ttttcggatcagccagcaaactg |
4574534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4560953 - 4560731
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560953 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttt-gaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
4560855 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccannn |
200 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4560854 |
attgaaccacccatcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattt |
4560755 |
T |
|
| Q |
201 |
nnnncggatcagccagcaaactga |
224 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
4560754 |
tttgcagatcagccagcaaactga |
4560731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 4266850 - 4267046
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4266850 |
ctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttggtgtccacaagataaagt |
4266949 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
4266950 |
gttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggcca |
4267046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 4481138 - 4480945
Alignment:
| Q |
4 |
atcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtatt |
103 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
4481138 |
atcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgtccacaagagaaagtttt |
4481039 |
T |
|
| Q |
104 |
gaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| |
|
|
| T |
4481038 |
gaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgttgtgttggcca |
4480945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4564159 - 4563963
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||| ||||||||||||||||| || ||||| |||||||| ||| |||| ||||||||||||||||| |||| ||||||||||||||||| |||||||| |
|
|
| T |
4564159 |
ctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagt |
4564060 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4564059 |
attgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggcca |
4563963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4602237 - 4602042
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| |||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4602237 |
ctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagt |
4602138 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcc |
196 |
Q |
| |
|
|||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
4602137 |
gttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggcc |
4602042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 4514805 - 4514999
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || ||||| ||| |||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4514805 |
ctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagt |
4514904 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggc |
195 |
Q |
| |
|
|||||||||| |||| | || |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| | ||||||| |
|
|
| T |
4514905 |
tttgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtgccaatgctttgttggc |
4514999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 4490039 - 4490235
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4490039 |
ctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaggt |
4490138 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||| |||| |||| | |||||||||||||||||||| ||||||||||||| || || || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
4490139 |
attgaatcacccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggagtgccaatgttgtgttggcca |
4490235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4617470 - 4617274
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||| ||| || |||||| |||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
4617470 |
ctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagacaaagt |
4617371 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||||||| |
|
|
| T |
4617370 |
gttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgccaatgttgtgttggcca |
4617274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4613402 - 4613624
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| ||||| || ||| |||| ||||||||||||||||| ||||| || || |||||||| |||||| |||| |
|
|
| T |
4613402 |
ctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcctcaagagcaagt |
4613501 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccannn |
200 |
Q |
| |
|
||| ||||||| |||| | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
4613502 |
attaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattt |
4613601 |
T |
|
| Q |
201 |
nnnncggatcagccagcaaactg |
223 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4613602 |
ttcgcggatcagccagcaaactg |
4613624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 4458042 - 4457858
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| |||||| |||| |||| ||| |||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
4458042 |
ctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtccacaagataaagt |
4457943 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatg |
185 |
Q |
| |
|
|||||||||| |||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
4457942 |
gttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatg |
4457858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4461571 - 4461375
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| |||||| | |||| |||||||| ||| |||| ||||||||||||||||| ||||||||||| |||||||| |||||| |||| |
|
|
| T |
4461571 |
ctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgcaagagcaagt |
4461472 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
| ||||||||| |||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||| |
|
|
| T |
4461471 |
actgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggcca |
4461375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 3172189 - 3171993
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| || ||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
3172189 |
ctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagagaaagt |
3172090 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||| | |||| | || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| | |||||||| ||| ||||| |
|
|
| T |
3172089 |
gttgaaccatccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaatgccaatgttgtgtaggcca |
3171993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4586084 - 4585888
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
||||||||||||||||||| || ||||||| |||||||| ||| ||| ||||||||||||||||| ||||| || ||||||| || |||||| |||| |
|
|
| T |
4586084 |
ctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgcaagagcaagt |
4585985 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
||||||||||| |||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
4585984 |
attgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggcca |
4585888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 4504081 - 4504277
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||| ||||||||||| | ||| || |||||||||||| |||| |||| ||| |||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
4504081 |
ctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagttggtgtccacaagataaagt |
4504180 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||| |
|
|
| T |
4504181 |
gttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgttgtgttggcca |
4504277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 4470249 - 4470055
Alignment:
| Q |
3 |
gatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtat |
102 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| || || | || | ||||||||||||||| ||||| | | |||||||| |||||| ||||| |
|
|
| T |
4470249 |
gatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgtcctcaagagcaagtac |
4470150 |
T |
|
| Q |
103 |
tgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
4470149 |
tgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggcca |
4470055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 4579878 - 4579684
Alignment:
| Q |
3 |
gatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtat |
102 |
Q |
| |
|
||||||||||| || ||||| | ||||| ||||| || ||| |||| ||||||||||||||||| |||||| | || |||||||| |||||| ||||| |
|
|
| T |
4579878 |
gatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacgagctggtgtccgcaagagcaagtac |
4579779 |
T |
|
| Q |
103 |
tgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
||||||||| |||| | |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4579778 |
tgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgttggcca |
4579684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4592679 - 4592483
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||| | | ||||| ||||| || ||| |||| ||||||||||||||||| |||| || || |||||||| |||||| |||| |
|
|
| T |
4592679 |
ctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctcaagagcaagt |
4592580 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
||| ||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| |
|
|
| T |
4592579 |
attaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgttggcca |
4592483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 4598619 - 4598427
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| || ||| |||| ||||||||||||||||| || | ||||| ||||||| |||||| |||| |
|
|
| T |
4598619 |
ctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgcaagctggtgtctgcaagagcaagt |
4598520 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttg |
193 |
Q |
| |
|
||| ||||| | |||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| |
|
|
| T |
4598519 |
attaaaccatccttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgttg |
4598427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4506305 - 4506110
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| || || || ||| || ||||||||||||||| | || |||||||| |||||| ||||||||||||| |
|
|
| T |
4506305 |
ctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagcaagctggtgttcacaagagaaagt |
4506206 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcc |
196 |
Q |
| |
|
|| || |||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||||| |
|
|
| T |
4506205 |
gttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctgtgttggcc |
4506110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 4557571 - 4557351
Alignment:
| Q |
3 |
gatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtat |
102 |
Q |
| |
|
||||||||||| |||||||| || ||||| ||||| || ||| | || ||||||||||||||||| ||||| || | ||||| || |||||| |||||| |
|
|
| T |
4557571 |
gatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgcaagagcaagtat |
4557472 |
T |
|
| Q |
103 |
tgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccannnnn |
202 |
Q |
| |
|
| ||||| | |||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4557471 |
taaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttt |
4557372 |
T |
|
| Q |
203 |
nncggatcagccagcaaactg |
223 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
4557371 |
tgctgatcagccagcaaactg |
4557351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4626399 - 4626203
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||| ||||||||||| | ||| ||||| || ||| ||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4626399 |
ctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgcaagagaaagt |
4626300 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
| ||||||| | |||| | ||||||||||| |||||||| |||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
4626299 |
actgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgttggcca |
4626203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4516769 - 4516574
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||||| |||||| |||| |||| ||| |||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
4516769 |
ctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgcaagagaaagt |
4516670 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcc |
196 |
Q |
| |
|
|||||||| | |||||| || ||||||||||||||||| ||||||||||| || | |||||||| ||||| ||||| |||||||| |||||||| |
|
|
| T |
4516669 |
gttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtgttggcc |
4516574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 4571418 - 4571198
Alignment:
| Q |
3 |
gatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtat |
102 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||| || ||| |||| ||||||||||||||||| ||||| || ||||||| | ||||||||||||| |
|
|
| T |
4571418 |
gatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctcgcaagagaaagtat |
4571319 |
T |
|
| Q |
103 |
tgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccannnnn |
202 |
Q |
| |
|
||||||| | |||| | ||||| ||||||||||| || |||||||||||||| || |||||||||| | |||||||||||||||| |||| |||| |
|
|
| T |
4571318 |
tgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgttagccattttt |
4571219 |
T |
|
| Q |
203 |
nncggatcagccagcaaactg |
223 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
4571218 |
tgctgatcagccagcaaactg |
4571198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4622590 - 4622394
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||| |||||||| || |||||| | |||| |||||||| ||| ||| |||||||||| |||||| ||||| ||| ||||||||||||||||| |||| |
|
|
| T |
4622590 |
ctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaagaggaagt |
4622491 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
| | ||||||| | || | |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||| | ||||||||| |
|
|
| T |
4622490 |
acttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttggcca |
4622394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 4256349 - 4256491
Alignment:
| Q |
55 |
tttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaac |
154 |
Q |
| |
|
|||| |||||||||||||| | ||||||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4256349 |
tttcggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaac |
4256448 |
T |
|
| Q |
155 |
cactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
4256449 |
cattgaaagcatttgtgccggagttccaatgttgtgttggcca |
4256491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 197
Target Start/End: Original strand, 4259888 - 4260034
Alignment:
| Q |
51 |
gaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaact |
150 |
Q |
| |
|
|||||||| |||||||| ||||| || || |||||||| |||||| ||||| |||||||| |||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
4259888 |
gaaatttcggatagaggcctaatcgcgagctggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaact |
4259987 |
T |
|
| Q |
151 |
caaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||| ||||||||| ||||| | |||||||||||| ||||||||| |
|
|
| T |
4259988 |
caaccattgaaagcatttgtgccgaagttccaatgttgtgttggcca |
4260034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 4493346 - 4493208
Alignment:
| Q |
58 |
cagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccac |
157 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||||||| | ||||||||| ||| | |||||||||||||||||||| |||||||||||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
158 |
tgaaagcatatgtgctggagttccaatgttatgttggcc |
196 |
Q |
| |
|
||| ||||||||| ||||| |||||||| |||||||| |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcc |
4493208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 4568499 - 4568309
Alignment:
| Q |
6 |
cttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattga |
105 |
Q |
| |
|
||||||||||||||||| || |||| ||||| || ||| |||| | || ||| |||||||| | ||||||||| |||||||| |||||| |||| |||| |
|
|
| T |
4568499 |
cttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaagagcaagtgttga |
4568400 |
T |
|
| Q |
106 |
accacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcc |
196 |
Q |
| |
|
|||||| |||||| || |||||||||||||||| ||||||||||| || |||||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
4568399 |
accacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtaccaatgttatgttggcc |
4568309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 4299510 - 4299673
Alignment:
| Q |
6 |
cttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattga |
105 |
Q |
| |
|
||||||||||| |||| | | |||| |||||||| ||| ||| ||||||||| ||||||| |||| ||||| | |||||||||||| ||||| ||| |
|
|
| T |
4299510 |
cttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagctagtgtccacaagaacaagtactga |
4299609 |
T |
|
| Q |
106 |
accacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatg |
169 |
Q |
| |
|
|||||| |||| | ||||||||||||||||| || |||||||||||||||| |||||||||||| |
|
|
| T |
4299610 |
accacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 4391885 - 4391996
Alignment:
| Q |
75 |
gcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctg |
174 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||||||| || | | |||||||||| || ||||| ||||| |||||| ||| ||||||||| ||| || |
|
|
| T |
4391885 |
gcaagatggtgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcatttgttcta |
4391984 |
T |
|
| Q |
175 |
gagttccaatgt |
186 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4391985 |
gagttccaatgt |
4391996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 1281562 - 1281366
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| ||||| ||| |||| |||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1281562 |
ctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagt |
1281463 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
1281462 |
gttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggcca |
1281366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 24103447 - 24103251
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24103447 |
ctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagttggtgtccacaagataaagt |
24103348 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|| ||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
24103347 |
gttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggcca |
24103251 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 194
Target Start/End: Original strand, 27999786 - 27999976
Alignment:
| Q |
4 |
atcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtatt |
103 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || |
|
|
| T |
27999786 |
atcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagtttt |
27999885 |
T |
|
| Q |
104 |
gaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttgg |
194 |
Q |
| |
|
|||||||| |||| || | || ||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||| |
|
|
| T |
27999886 |
gaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagtgccaatgttgtgttgg |
27999976 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 1674674 - 1674478
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |
|
|
| T |
1674674 |
ctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagt |
1674575 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||||| |||| |||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
1674574 |
gttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggcca |
1674478 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 20863527 - 20863723
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||| ||| |||| ||||||||||||||||| ||||| || |||||||||||||||||||| || |
|
|
| T |
20863527 |
ctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtgaatgaaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggt |
20863626 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||||| | |||| | |||||||| | |||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||| || |||||| |
|
|
| T |
20863627 |
gttgaaccatccttcaattggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctggagtgccaatgttgtgctggcca |
20863723 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 16685951 - 16686147
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||| | || || |||||||| |||||||| ||| ||| ||||| ||||||||| | ||||| || || ||||| || |||||| |||| |
|
|
| T |
16685951 |
ctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgcaagagcaagt |
16686050 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
||| ||||| | |||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
16686051 |
attaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgttggcca |
16686147 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 4370 - 4566
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||| ||||||||||| |||||| | |||| |||||||| ||| ||| ||||||||||||||||| ||||| || || ||||||||||||||| |||| |
|
|
| T |
4370 |
ctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagt |
4469 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
| ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
4470 |
actgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttggcca |
4566 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 3403 - 3599
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| |||||| | |||| ||||| || ||| ||| ||||||||||||||||| ||||| |||| ||||||||||||||| |||| |
|
|
| T |
3403 |
ctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccacaagagcaagt |
3502 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
| ||| ||||| |||| | |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
3503 |
actgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatgctttgttggcca |
3599 |
T |
|
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Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 3086868 - 3086672
Alignment:
| Q |
1 |
ctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
|||||||||||||||| ||||| | || | |||||||| ||| ||||||||||||||||||||| ||||| ||||| |||||||| |||||| |||| |
|
|
| T |
3086868 |
ctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgcaagagcaagt |
3086769 |
T |
|
| Q |
101 |
attgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttatgttggcca |
197 |
Q |
| |
|
|||||| |||| |||| | |||||||||||||||||||| |||||||||||||| ||||||| || ||||||||| |||||||| ||||||||| |
|
|
| T |
3086768 |
attgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgttggcca |
3086672 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 3443 - 3552
Alignment:
| Q |
75 |
gcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctg |
174 |
Q |
| |
|
||||| |||||||| ||||| |||| |||||||||| || ||| ||||||||||| |||||||| |||||||||||||||| ||||||||| ||| ||| |
|
|
| T |
3443 |
gcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctg |
3541 |
T |
|
| Q |
175 |
gagttccaatg |
185 |
Q |
| |
|
||||||||||| |
|
|
| T |
3542 |
gagttccaatg |
3552 |
T |
|
Back To:
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Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 1351057 - 1351098
Alignment:
| Q |
59 |
agatagaggactaatagcaagttggtgtccacaagagaaagt |
100 |
Q |
| |
|
||||||||||||||| | | |||||||||||||||||||||| |
|
|
| T |
1351057 |
agatagaggactaatggtaggttggtgtccacaagagaaagt |
1351098 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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