View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1457R-Insertion-11 (Length: 283)

Name: NF1457R-Insertion-11
Description: NF1457R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1457R-Insertion-11
NF1457R-Insertion-11
[»] chr6 (1 HSPs)
chr6 (8-283)||(30010415-30010690)


Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 30010415 - 30010690
Alignment:
Q  8 aactagtcattcgggttagatatgaccgtaatgagattagtcactcgagtcacgtatatccttagcaagcattttacacaatattttgctctcttaagtg 107  Q
    ||||||||||||| || ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30010415 aactagtcattcgagtcagatatgaccgtaatgagactaatcactcgagtcaggtatatccttagcaagcattttacacaatattttgctctcttaagtg 30010514  T
Q  108 aatgttcatgtttggtgagctttataaagaagatattgattattgagttatagattgtggggttggtgaccaaaaccattttatgtcacatggttttcct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30010515 aatgttcatgtttggtgagctttataaagaagatattgattattgagttatagattgtggggttggtgaccaaaaccattttatgtcacatggttttcct 30010614  T
Q  208 cgacctattgatagtcgacttggttgtttttgttcttactcacaataaacaatcacttcctaactttgttttctgg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30010615 cgacctattgatagtcgacttggttgtttttgttcttactcacaataaacgatcacttcctaactttgttttctgg 30010690  T

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