View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1457_1D_high_3 (Length: 470)
Name: NF1457_1D_high_3
Description: NF1457_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457_1D_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 434; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 7 - 448
Target Start/End: Original strand, 35771355 - 35771796
Alignment:
| Q |
7 |
tttggtgttgccagaaactgaagatgattgatctacacaattgtgacaatcttctaggttttggggacaatattgaaaactatatagaaattggatctct |
106 |
Q |
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| T |
35771355 |
tttggtgttgccagaaactgaagatgattgatctacacaattgtgacaatcttctaggttttggggacaatattgaaaactatatagaaattggatctct |
35771454 |
T |
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| Q |
107 |
taatactctggtcctttctgggtgcaaacaactcaatgcatcaaatctctatttcaacatcaaagcatggcaatcaactttaacctcgctgaatttggaa |
206 |
Q |
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| T |
35771455 |
taatactctggtcctttctgggtgcaaacaactcaatgcatcaaatctctatttcaacatcaaagcatggcaatcaactttaacctcgctgaatttggaa |
35771554 |
T |
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| Q |
207 |
aactgttgcaacttagaggcactacctgacaacattggtttattatcatcgttgcaacgcttaaggctaagtggaagcaatgttgagagtttgataccaa |
306 |
Q |
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| T |
35771555 |
aactgttgcaacttaaaggcactacctgacaacattggtttattatcatcgttgcaacgcttaaggctaagtggaagcaatgttgagagtttgacaccaa |
35771654 |
T |
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| Q |
307 |
acataaaaaatctcaacaacctcaaagaactaaggttagactactgcaagaaactcgtgtccgtatctgtgtctgactttccaccgtcactgcgattgtt |
406 |
Q |
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| T |
35771655 |
acataaaaaatctcaacaacctcaaagaactaaggttagactactgcaagaaactcgtgtccgtatctgtgtctgactttccaccgtcactgcgattgtt |
35771754 |
T |
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| Q |
407 |
tagtgctattaactgcatttctcttgtcactgaccttactac |
448 |
Q |
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| T |
35771755 |
tagtgctattaactgcatttctcttgtcactgaccttactac |
35771796 |
T |
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