View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1457_1D_low_30 (Length: 283)
Name: NF1457_1D_low_30
Description: NF1457_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457_1D_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 26137724 - 26138006
Alignment:
| Q |
1 |
tcatatcttaatttggagtatttggtgttttcaatttcataggttgttatattagtaatgtaattttgttaaaaactaatagtaatagtgtgtaattaaa |
100 |
Q |
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| T |
26137724 |
tcatatcttaatttcgagtatttggtgttttcaatttcataggttgttatattagtaatgtaattttgttaaaaactaacagtaatagtgtgtaattaaa |
26137823 |
T |
|
| Q |
101 |
atgaataatccgcgtaaggaaaatgtgaccaactaacaaaagagatgaataattgattagaaggggcaatcaaaggtttccaaccacttggtagaatatg |
200 |
Q |
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| T |
26137824 |
atgaataatccgcgtaaggaaaatgtgaccaactaacaaaagagatgaataattgattagaaggagcaatcaaaggtttccaaccacttggtagaatatg |
26137923 |
T |
|
| Q |
201 |
tatgctcccacctaaagtttgaatttatacctttagaacaattattccatag-ttaattgagaaagacgtaaggcaaagcatg |
282 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
26137924 |
tatgctcccacctaaagtttgaatttatacctttggaacaattattccatagattaattgagaaagacgtaaggcaaagcatg |
26138006 |
T |
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