View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1457_1D_low_34 (Length: 272)

Name: NF1457_1D_low_34
Description: NF1457_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1457_1D_low_34
NF1457_1D_low_34
[»] chr2 (37 HSPs)
chr2 (17-272)||(42982418-42982674)
chr2 (122-241)||(33019142-33019260)
chr2 (143-241)||(42740977-42741075)
chr2 (41-121)||(7629750-7629830)
chr2 (122-241)||(44439231-44439353)
chr2 (143-236)||(11504053-11504146)
chr2 (146-241)||(13912790-13912886)
chr2 (122-241)||(16518760-16518877)
chr2 (143-237)||(4894147-4894242)
chr2 (191-241)||(1976850-1976900)
chr2 (143-241)||(43501125-43501222)
chr2 (44-226)||(37420196-37420391)
chr2 (122-241)||(22535979-22536097)
chr2 (53-180)||(37649534-37649659)
chr2 (146-241)||(5533017-5533113)
chr2 (154-194)||(7630204-7630244)
chr2 (48-120)||(9943318-9943390)
chr2 (54-122)||(40582650-40582718)
chr2 (46-118)||(43717235-43717307)
chr2 (42-109)||(3476561-3476628)
chr2 (198-237)||(9605242-9605281)
chr2 (122-211)||(10618957-10619045)
chr2 (122-235)||(11510934-11511046)
chr2 (202-241)||(15220847-15220886)
chr2 (124-194)||(30503192-30503260)
chr2 (143-228)||(3352076-3352162)
chr2 (166-227)||(33502260-33502322)
chr2 (39-116)||(4778439-4778516)
chr2 (122-194)||(21659700-21659770)
chr2 (161-241)||(32596009-32596090)
chr2 (204-241)||(40401629-40401666)
chr2 (122-204)||(2002718-2002799)
chr2 (44-72)||(3654759-3654787)
chr2 (166-241)||(8800684-8800760)
chr2 (189-241)||(13238847-13238899)
chr2 (55-107)||(16519348-16519400)
chr2 (166-241)||(33047568-33047644)
[»] chr6 (39 HSPs)
chr6 (49-241)||(34620782-34620985)
chr6 (49-241)||(34748219-34748422)
chr6 (143-241)||(1485132-1485231)
chr6 (143-241)||(4910908-4911007)
chr6 (126-233)||(852517-852623)
chr6 (154-241)||(31305833-31305921)
chr6 (163-237)||(17225872-17225947)
chr6 (122-240)||(2234496-2234614)
chr6 (122-228)||(26280586-26280691)
chr6 (44-115)||(29240575-29240646)
chr6 (45-231)||(5724626-5724823)
chr6 (166-241)||(3482069-3482145)
chr6 (44-120)||(10400814-10400890)
chr6 (122-224)||(10874475-10874576)
chr6 (143-242)||(25388077-25388176)
chr6 (170-237)||(34027407-34027475)
chr6 (143-237)||(6895940-6896035)
chr6 (154-232)||(9505781-9505860)
chr6 (143-241)||(16540107-16540206)
chr6 (144-241)||(882687-882785)
chr6 (169-241)||(25195876-25195947)
chr6 (47-120)||(31812203-31812276)
chr6 (126-208)||(7952728-7952809)
chr6 (123-237)||(8854902-8855015)
chr6 (166-237)||(8860527-8860599)
chr6 (154-241)||(30926765-30926852)
chr6 (43-120)||(33136601-33136677)
chr6 (53-120)||(33997098-33997165)
chr6 (170-238)||(947594-947661)
chr6 (191-241)||(24982342-24982392)
chr6 (122-241)||(25195352-25195468)
chr6 (71-117)||(31303120-31303166)
chr6 (145-237)||(34898697-34898791)
chr6 (143-192)||(765422-765471)
chr6 (122-241)||(6654076-6654194)
chr6 (44-121)||(7952443-7952520)
chr6 (48-112)||(7262966-7263030)
chr6 (197-241)||(8856362-8856406)
chr6 (166-232)||(34910970-34911035)
[»] chr4 (28 HSPs)
chr4 (122-241)||(32818356-32818474)
chr4 (122-241)||(55927756-55927874)
chr4 (154-241)||(10185205-10185293)
chr4 (143-241)||(8604608-8604707)
chr4 (145-240)||(16551959-16552053)
chr4 (122-241)||(35065044-35065162)
chr4 (162-241)||(4243406-4243486)
chr4 (154-232)||(33843988-33844067)
chr4 (143-235)||(9064231-9064324)
chr4 (166-241)||(21691198-21691274)
chr4 (147-242)||(22250230-22250326)
chr4 (122-240)||(9134591-9134706)
chr4 (122-241)||(46344820-46344935)
chr4 (166-241)||(45011897-45011973)
chr4 (143-237)||(29904232-29904327)
chr4 (44-117)||(47596416-47596490)
chr4 (44-117)||(2635054-2635127)
chr4 (122-225)||(50061630-50061732)
chr4 (124-195)||(2635146-2635215)
chr4 (143-241)||(1616391-1616489)
chr4 (48-118)||(41058821-41058891)
chr4 (172-241)||(45694643-45694713)
chr4 (122-194)||(26617449-26617519)
chr4 (191-228)||(32100341-32100378)
chr4 (154-218)||(37439156-37439221)
chr4 (154-194)||(8330127-8330167)
chr4 (166-242)||(25927331-25927406)
chr4 (201-241)||(47144273-47144313)
[»] chr8 (32 HSPs)
chr8 (143-241)||(32927892-32927991)
chr8 (142-241)||(35494989-35495089)
chr8 (143-228)||(13384653-13384739)
chr8 (122-241)||(4662889-4663007)
chr8 (154-241)||(26100132-26100220)
chr8 (122-241)||(16972050-16972168)
chr8 (122-241)||(37684386-37684504)
chr8 (143-232)||(15677810-15677901)
chr8 (44-116)||(35495151-35495223)
chr8 (45-117)||(36448006-36448078)
chr8 (143-242)||(38868498-38868598)
chr8 (169-241)||(32767413-32767488)
chr8 (191-242)||(32736511-32736562)
chr8 (143-233)||(32994236-32994327)
chr8 (173-233)||(5859057-5859118)
chr8 (166-238)||(38335850-38335923)
chr8 (43-120)||(39648263-39648340)
chr8 (122-225)||(44141052-44141154)
chr8 (154-238)||(30098921-30099004)
chr8 (46-121)||(4554399-4554474)
chr8 (127-228)||(38537357-38537457)
chr8 (190-232)||(9695435-9695477)
chr8 (200-241)||(3279028-3279069)
chr8 (77-118)||(8252721-8252762)
chr8 (143-231)||(13418815-13418904)
chr8 (47-120)||(32056259-32056331)
chr8 (122-241)||(35495241-35495359)
chr8 (166-242)||(38868766-38868843)
chr8 (202-242)||(2764454-2764494)
chr8 (154-242)||(18355835-18355922)
chr8 (48-120)||(24776211-24776283)
chr8 (199-239)||(32101130-32101170)
[»] chr7 (16 HSPs)
chr7 (143-234)||(38123659-38123751)
chr7 (122-240)||(27571843-27571960)
chr7 (122-241)||(40491559-40491677)
chr7 (143-247)||(41386795-41386900)
chr7 (143-241)||(40561744-40561843)
chr7 (155-241)||(45557377-45557464)
chr7 (143-231)||(597942-598030)
chr7 (143-211)||(30182312-30182381)
chr7 (122-237)||(45005001-45005115)
chr7 (50-121)||(38123765-38123836)
chr7 (143-241)||(41788316-41788415)
chr7 (44-120)||(15050184-15050259)
chr7 (170-240)||(40795976-40796047)
chr7 (126-195)||(5489879-5489946)
chr7 (172-241)||(42816454-42816524)
chr7 (143-192)||(28725088-28725137)
[»] chr1 (40 HSPs)
chr1 (143-241)||(3016162-3016261)
chr1 (144-241)||(30557505-30557601)
chr1 (146-241)||(1514346-1514442)
chr1 (126-239)||(10324926-10325038)
chr1 (145-239)||(11049252-11049347)
chr1 (143-237)||(48549004-48549097)
chr1 (143-241)||(28083874-28083973)
chr1 (166-241)||(7524136-7524212)
chr1 (163-241)||(213523-213602)
chr1 (144-233)||(30850393-30850483)
chr1 (145-194)||(3515820-3515869)
chr1 (122-229)||(6021785-6021891)
chr1 (157-236)||(26373535-26373612)
chr1 (147-226)||(28287337-28287417)
chr1 (166-241)||(34915089-34915165)
chr1 (143-225)||(7790644-7790727)
chr1 (143-225)||(8381966-8382049)
chr1 (143-225)||(20026166-20026249)
chr1 (144-195)||(47892421-47892472)
chr1 (45-99)||(20721054-20721108)
chr1 (143-232)||(47321902-47321991)
chr1 (162-242)||(4458405-4458486)
chr1 (122-237)||(9939719-9939832)
chr1 (46-106)||(8130851-8130911)
chr1 (48-120)||(32088691-32088763)
chr1 (154-194)||(33693032-33693072)
chr1 (49-112)||(41516883-41516946)
chr1 (191-237)||(1233354-1233400)
chr1 (51-121)||(8381882-8381952)
chr1 (43-109)||(14105035-14105101)
chr1 (154-227)||(20720827-20720901)
chr1 (146-208)||(40663000-40663061)
chr1 (191-241)||(52263633-52263683)
chr1 (185-242)||(11817302-11817359)
chr1 (153-194)||(31362239-31362280)
chr1 (44-121)||(49079331-49079408)
chr1 (166-241)||(3416103-3416179)
chr1 (144-231)||(24587910-24588001)
chr1 (191-231)||(27500334-27500374)
chr1 (214-242)||(47053476-47053504)
[»] chr3 (39 HSPs)
chr3 (122-235)||(7717320-7717425)
chr3 (35-120)||(52925729-52925814)
chr3 (166-241)||(31708225-31708301)
chr3 (122-239)||(36302164-36302280)
chr3 (146-231)||(27266790-27266876)
chr3 (122-225)||(35058342-35058445)
chr3 (144-241)||(35264397-35264495)
chr3 (122-241)||(25359560-25359678)
chr3 (44-117)||(39256566-39256639)
chr3 (145-240)||(3776524-3776620)
chr3 (45-117)||(3845233-3845305)
chr3 (122-241)||(5406887-5407003)
chr3 (45-120)||(1441499-1441574)
chr3 (170-238)||(46853523-46853592)
chr3 (122-236)||(37335025-37335138)
chr3 (143-241)||(40147836-40147935)
chr3 (44-121)||(3776430-3776507)
chr3 (154-242)||(35253452-35253541)
chr3 (166-241)||(41596135-41596211)
chr3 (44-112)||(51285450-51285518)
chr3 (122-211)||(44958622-44958710)
chr3 (166-208)||(31492790-31492832)
chr3 (122-228)||(30300997-30301103)
chr3 (122-194)||(44771675-44771745)
chr3 (48-116)||(48089819-48089887)
chr3 (143-241)||(584779-584877)
chr3 (44-115)||(34867309-34867380)
chr3 (155-241)||(38332540-38332627)
chr3 (170-240)||(51285597-51285668)
chr3 (166-231)||(32523336-32523402)
chr3 (187-236)||(43661883-43661933)
chr3 (191-240)||(190875-190924)
chr3 (49-118)||(829786-829855)
chr3 (47-120)||(1290675-1290748)
chr3 (166-234)||(4526155-4526224)
chr3 (156-236)||(52141239-52141320)
chr3 (45-121)||(584909-584985)
chr3 (201-237)||(7262873-7262909)
chr3 (166-241)||(31013041-31013117)
[»] chr5 (25 HSPs)
chr5 (124-233)||(9818717-9818826)
chr5 (143-242)||(6951290-6951390)
chr5 (49-241)||(34250340-34250540)
chr5 (143-241)||(18851068-18851167)
chr5 (122-231)||(36639918-36640026)
chr5 (46-116)||(3043126-3043196)
chr5 (143-241)||(38845443-38845543)
chr5 (46-121)||(15368136-15368211)
chr5 (41-120)||(29922782-29922861)
chr5 (143-241)||(42858108-42858207)
chr5 (191-231)||(10898770-10898810)
chr5 (122-194)||(3970434-3970505)
chr5 (143-236)||(22226227-22226321)
chr5 (46-117)||(10859942-10860013)
chr5 (159-241)||(15368489-15368572)
chr5 (154-211)||(24306112-24306170)
chr5 (154-211)||(24367146-24367204)
chr5 (48-118)||(28973753-28973823)
chr5 (188-241)||(4306558-4306611)
chr5 (166-234)||(28110431-28110500)
chr5 (183-242)||(8591521-8591581)
chr5 (60-120)||(10898629-10898689)
chr5 (77-117)||(37019604-37019644)
chr5 (48-120)||(39097159-39097231)
chr5 (154-194)||(43310574-43310614)
[»] scaffold0361 (2 HSPs)
scaffold0361 (143-241)||(14100-14198)
scaffold0361 (42-109)||(14242-14309)
[»] scaffold0168 (2 HSPs)
scaffold0168 (122-241)||(31807-31928)
scaffold0168 (45-120)||(31718-31793)


Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 42982418 - 42982674
Alignment:
Q  17 acatcaagctaagaaacaatattatttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgttt 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42982418 acataaagctaagaaacaatattacttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacatgtagaactgattttgacatgttt 42982517  T
Q  117 ggttcattgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaa 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  42982518 ggttcattgattttgcctccagaattttgattctacttgaagctagaaattgtagcttttgattccagaattgatttttacacacaaatttattttacaa 42982617  T
Q  216 ctcacttttacatgaatgtatccaaatcactttccctttagctcaattttacagaat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42982618 ctcacttttacatgaatgtatccaaatcactttccctttagctcaattttacagaat 42982674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 33019260 - 33019142
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||| |||||| ||||||  |||| ||  ||||||||||| |||||||||||| ||  |||||||||||| ||||| |||||||| || ||||||||    
T  33019260 attgattctgcctctagaatt--gattatatttgaagctagaatttgtagcttttggttttagaattgattttcacacataaatttatagttcaactcac 33019163  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    ||||||||||||| |||||||    
T  33019162 ttttacatgaatgcatccaaa 33019142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 42740977 - 42741075
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||  | |||||||||||||||| |||||||| |||||||| |||||||| ||| |||||||||||||||| ||||||| ||||    
T  42740977 ttgattctacttgaagctaagatttgtagcttttgattctagaattgatttttacactcaaatttactgtccaactcacttttacat-aatgtattcaaa 42741075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 7629750 - 7629830
Alignment:
Q  41 tttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    ||||||||||||||||||||||||||||||||  | | ||| |||||| | |||||||| |||||||| ||||||||||||    
T  7629750 tttagtgtatgtttggttccacttttggaggagccaagattgattctagaggtgtagaattgattttgtcatgtttggttc 7629830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 44439231 - 44439353
Alignment:
Q  122 attgattttgcctccagaatt-ttgattctacct-gaagctagaaattgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactc 218  Q
    |||||||||||||| ||||   ||||||||| || ||||||| || ||| |||||||||||| | ||||||||||| ||| |||||||||||| ||||||    
T  44439231 attgattttgcctctagaagaattgattctaacttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgttcaactc 44439330  T
Q  219 acttttacatgaatgtatccaaa 241  Q
    |||||||||| ||  ||||||||    
T  44439331 acttttacataaacatatccaaa 44439353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 11504146 - 11504053
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtat 236  Q
    |||||||||||  ||| ||| | |||||| ||||||||  ||||||| ||| ||||||||| |||| || ||||||||||||||||||||||||    
T  11504146 ttgattctaccgaaagttaggatttgtagtttttgattatagaattgttttcacacacaaagttatagttcaactcacttttacatgaatgtat 11504053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 13912790 - 13912886
Alignment:
Q  146 attctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| ||||||||||| |||||  |||| |||| |||||| ||||| |||||||||||||  || ||||||| |||||||||| ||||||||||    
T  13912790 attctacatgaagctagaatttgtaattttttattctagaattaatttttacacacaaatttaccgttcaactcatttttacatgattgtatccaaa 13912886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 16518760 - 16518877
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcact 221  Q
    |||| |||||| |||||||||  ||||||||  |||| ||| | |||||||||||||||  |  ||   |||||| ||||||||||| || |||||||||    
T  16518760 attggttttgcttccagaatt--gattctactagaagataggatttgtagcttttgattataagatgacttttacgcacaaatttatagttcaactcact 16518857  T
Q  222 tttacatgaatgtatccaaa 241  Q
    ||||||||||||||||||||    
T  16518858 tttacatgaatgtatccaaa 16518877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 4894242 - 4894147
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatt-ttacacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    ||||||| || |||| |||||||| |||||||||||||| | |||||||| ||| || |||||||||| | ||| ||||||||| |||||||||||    
T  4894242 ttgattcaacttgaaactagaaatcgtagcttttgattctataattgattattatactcaaatttattattcaagtcacttttaaatgaatgtatc 4894147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 1976900 - 1976850
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  1976900 ttttacactcaaatttattgttgaactcacttttacatgaatgtatccaaa 1976850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 43501125 - 43501222
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| |||| |||| | |||||||||||||||  |||||||||| || ||||||| ||||  | ||||||| |||||||||||||||| ||||    
T  43501125 ttgattctacttgaaactaggatttgtagcttttgattttagaattgattcta-acacaaaattataattcaactcagttttacatgaatgtatacaaa 43501222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 37420391 - 37420196
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttgg-ttc-----------attgattttg 131  Q
    ||||||||||   ||||||||||||| || | |||||| |||||| | |||||||| |||||||||||||||||| |||           ||||||||||    
T  37420391 agtgtatgttctcttccacttttggaagagtgcaaattgattctagaggtgtagaattgattttgacatgtttggcttccctagagtagaattgattttg 37420292  T
Q  132 cctccagaattttgattctacctgaagctagaaattgtagcttttgat--tccagaattga-ttttacacacaaatttattgtacaactcacttttac 226  Q
    |||| ||||  ||||||||||  ||| ||||||| |||||||| | ||  || |||||||| |||||||| |||||||||| | ||||||||||||||    
T  37420291 cctctagaa--ttgattctactagaatctagaaaatgtagcttctaattctctagaattgatttttacactcaaatttattattcaactcacttttac 37420196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 22535979 - 22536097
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcac 220  Q
    |||||||||||||  ||||||  |||||||| ||||  ||||| ||| |||||||||||  |||||| |||||  |||||| |||||| ||  ||||||     
T  22535979 attgattttgcctttagaatt--gattctacttgaatttagaatttgaagcttttgattttagaattaatttttgcacacatatttatagttaaactcat 22536076  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||| ||||||||||||    
T  22536077 ttttacataaatgtatccaaa 22536097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 37649659 - 37649534
Alignment:
Q  53 ttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttcattgattttgcctccagaattttgattct-a 151  Q
    |||||||||||||||||||| || ||||| |||||  | || | ||| ||||||||||||||||| || | ||| ||||||||| |||  |||||||| |    
T  37649659 ttggttccacttttggaggagtcaaaattgattcttgaggtatggaattgattttgacatgtttgatt-actgactttgcctccggaa--ttgattctaa 37649563  T
Q  152 cctgaagctagaaattgtagcttttgatt 180  Q
    | | |||| |||||||| |||||||||||    
T  37649562 cttaaagcaagaaattgaagcttttgatt 37649534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 5533113 - 5533017
Alignment:
Q  146 attctacctgaagctagaaattgtagcttttgattccagaattgattt-tacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| ||||||||  | ||||||||||||||||   |||||||||  ||||| ||||||||  | |||||||| |||||||||| |||||||||    
T  5533113 attctacttgaagctactatttgtagcttttgattcttaaattgatttaaacacataaatttataattcaactcacatttacatgaacgtatccaaa 5533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 7630204 - 7630244
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  7630204 tgaagctagacattgtagcttttgattctagaattgatttt 7630244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 9943318 - 9943390
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    ||||||||||||||| ||||||| || | ||||| ||||| || ||||| || ||||||| ||||||||||||    
T  9943318 tatgtttggttccacatttggagcaaccaaaattgattctgaaggtgtaaaattgattttaacatgtttggtt 9943390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 40582650 - 40582718
Alignment:
Q  54 tggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttca 122  Q
    |||||||||||||||| ||  | ||||| |||||| | |||||||| ||||||| ||||||||||||||    
T  40582650 tggttccacttttggaagagccaaaattgattctagaggtgtagaattgattttaacatgtttggttca 40582718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 43717235 - 43717307
Alignment:
Q  46 tgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttgg 118  Q
    |||| |||||||| ||||||||||||  |  ||||| |||||| | |||||||| ||||||||||||||||||    
T  43717235 tgtacgtttggtttcacttttggaggtgttaaaattgattctagatgtgtagaattgattttgacatgtttgg 43717307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 3476628 - 3476561
Alignment:
Q  42 ttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttga 109  Q
    |||||||||||||||||||||||||||| ||  | | ||| |||||| | |||||||| |||||||||    
T  3476628 ttagtgtatgtttggttccacttttggaagagccgatatttattctagaggtgtagaattgattttga 3476561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 9605242 - 9605281
Alignment:
Q  198 cacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  9605242 cacaaatttattgttcaactcacttttacataaatgtatc 9605281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 10619045 - 10618957
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgt 211  Q
    |||||||||||||  ||||||  |||||||  ||||||||||||||  |||||||||||| | |||||||||| |||| ||||||| ||||    
T  10619045 attgattttgcctttagaatt--gattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgt 10618957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 11510934 - 11511046
Alignment:
Q  122 attgattttgcctccagaattttgattctacct-gaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcac 220  Q
    |||||||||||||||| |  |||||||||| || |||||||||| ||| || |||||  || | |||| ||||||  | |||||||||||| |||| |||    
T  11510934 attgattttgcctccata--tttgattctatcttgaagctagaatttggagtttttgcctctacaatttattttaacctcaaatttattgttcaacccac 11511031  T
Q  221 ttttacatgaatgta 235  Q
    ||||| |||||||||    
T  11511032 ttttatatgaatgta 11511046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 15220886 - 15220847
Alignment:
Q  202 aatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  15220886 aatttattgttcaactcactttaacatgaatgtatccaaa 15220847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 30503192 - 30503260
Alignment:
Q  124 tgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||||||||| ||||  |||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  30503192 tgattttgcctccaaaatt--gattctacttgaagccaggattcgtagcttttgattcaagaattgatttt 30503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 3352076 - 3352162
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacat 228  Q
    |||||| ||| ||||| | | ||||| |||||||||||| | |||||||||| ||||||||||||||  | ||||| ||||||||||    
T  3352076 ttgattttacttgaagttgggaattgcagcttttgattctataattgattttcacacacaaatttatgtttcaacttacttttacat 3352162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 33502260 - 33502322
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttaca 227  Q
    ||||| |||||||||| | |||||||||| ||||||| |||||| || |||||||||||||||    
T  33502260 ttgtaacttttgattctaaaattgatttttacacacatatttatagttcaactcacttttaca 33502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 4778439 - 4778516
Alignment:
Q  39 tatttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgttt 116  Q
    ||||| ||||||||||| || || ||||| |||| || |||||||||||| | |||||||| |||| || ||||||||    
T  4778439 tatttggtgtatgtttgatttcatttttgaaggagtcaaaattaattctagaagtgtagaattgatgttaacatgttt 4778516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 21659700 - 21659770
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||||||||||| |||| |  ||||||  | ||||| |||||||||||| |||||| ||||||||||||    
T  21659700 attgattttgcctccataattgt--ttctactcgtagctaaaaattgtagcttatgattctagaattgatttt 21659770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 32596009 - 32596090
Alignment:
Q  161 agaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||| ||||| |||||||||| | |||||||||| ||| ||||||| ||  | |||||||||||||||| ||| ||||||||    
T  32596009 agaatttgtaacttttgattctaaaattgatttttacatacaaattcataattcaactcacttttacataaatatatccaaa 32596090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 40401666 - 40401629
Alignment:
Q  204 tttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  40401666 tttattgttcaactgacttttacatgaatgtatccaaa 40401629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 2002799 - 2002718
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaat 204  Q
    ||||||||||||||||||    ||||||||| ||||||||| | |||||| |||| |||| | |||||| ||||||||||||||    
T  2002799 attgattttgcctccaga--cctgattctacttgaagctaggatttgtagtttttcattctaaaattgatttttacacacaaat 2002718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 3654787 - 3654759
Alignment:
Q  44 agtgtatgtttggttccacttttggagga 72  Q
    |||||||||||||||||||||||||||||    
T  3654787 agtgtatgtttggttccacttttggagga 3654759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 8800760 - 8800684
Alignment:
Q  166 ttgtagcttttgattccagaattgattttac-acacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||| ||||||| || | |||||||||||  | ||||||||||  | ||||||||||||||||||| |||||||||    
T  8800760 ttgtaacttttgaatctataattgattttaatatacaaatttataattcaactcacttttacatgaacgtatccaaa 8800684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 13238847 - 13238899
Alignment:
Q  189 gattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| |||||||||| | ||||||||||| |||||||  ||||||||    
T  13238847 gattttacactcaaatttatttttcaactcactttcacatgaacttatccaaa 13238899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 16519348 - 16519400
Alignment:
Q  55 ggttccacttttggaggaatccaaattaattctaaacgtgtagaactgatttt 107  Q
    ||||||||||||||||||| | ||||| |||||| | |||||||| |||||||    
T  16519348 ggttccacttttggaggaagcaaaattgattctagaggtgtagaattgatttt 16519400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 33047644 - 33047568
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||||||  |||| ||||||| ||| | |||||||  || || ||||||||||||| ||||||||||||    
T  33047644 ttgtagcttttgattttagaaatgattttcacagaaaaatttacggttcacctcacttttacataaatgtatccaaa 33047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 241
Target Start/End: Original strand, 34620782 - 34620985
Alignment:
Q  49 atgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc------------attgattttgcctcc 136  Q
    |||||| |||||||||||||||||  | ||||| |||||||| |||||||| |||||||||||||||||||||            ||| |||||||||||    
T  34620782 atgtttcgttccacttttggaggacccaaaattgattctaaaggtgtagaattgattttgacatgtttggttcctataaactagaattaattttgcctcc 34620881  T
Q  137 agaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgta 235  Q
     |||||  |||||||| |||||||||||||  |||||| |||||| |||||||| ||||||||  ||||||||| | |||||||||||||||| ||||||    
T  34620882 ggaatt--gattctacatgaagctagaaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgta 34620979  T
Q  236 tccaaa 241  Q
    ||||||    
T  34620980 tccaaa 34620985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 241
Target Start/End: Original strand, 34748219 - 34748422
Alignment:
Q  49 atgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc------------attgattttgcctcc 136  Q
    |||||| |||||||||||||||||  | ||||| |||||||| |||||||| |||||||||||||||||||||            ||| |||||||||||    
T  34748219 atgtttcgttccacttttggaggacccaaaattgattctaaaggtgtagaattgattttgacatgtttggttcctataaactagaattaattttgcctcc 34748318  T
Q  137 agaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgta 235  Q
     |||||  |||||||| |||||||||||||  |||||| |||||| |||||||| ||||||||  ||||||||| | |||||||||||||||| ||||||    
T  34748319 ggaatt--gattctacatgaagctagaaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgta 34748416  T
Q  236 tccaaa 241  Q
    ||||||    
T  34748417 tccaaa 34748422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 1485231 - 1485132
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| |||| |||||||||| |||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| | ||||||||||    
T  1485231 ttgattctacttgaatctagaaattggagcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttacataagtgtatccaaa 1485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 4910908 - 4911007
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||  | |||||||||||||||| |||||||||||| ||| |||||||||| || | |||||||||||||| ||||||||||||    
T  4910908 ttgattctacttgaagctatgatttgtagcttttgattctagaattgattttcacatacaaatttatagttcgactcacttttacataaatgtatccaaa 4911007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 852517 - 852623
Alignment:
Q  126 attttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcactttt 224  Q
    |||||||||||| ||||  ||||| || |||||||||||||||||| || |||||| |||||||| |||||||| ||||| ||||||  |||||||||||    
T  852517 attttgcctccataatt--gattcaacttgaagctagaaattgtaggttctgattctagaattgatttttacacccaaatgtattgtttaactcactttt 852614  T
Q  225 acatgaatg 233  Q
    |||||||||    
T  852615 acatgaatg 852623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 31305921 - 31305833
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgattt-tacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||| |||||| |||||||||||| ||||||||||| ||||| |||||||||||  |||||||||||||||| ||| ||||||||    
T  31305921 tgaagctaaaaattggagcttttgattctagaattgatttatacactcaaatttattgatcaactcacttttacattaatatatccaaa 31305833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 17225872 - 17225947
Alignment:
Q  163 aaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||| || ||||||| |||||||||||||||||    
T  17225872 aaattgtagcttttgattctagaattgatttttacatacaaatttatagttcaactcagttttacatgaatgtatc 17225947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 2234496 - 2234614
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaattta-ttgtacaactca 219  Q
    ||||||||||||| || ||||  ||||| || |||||||| ||| || |||||||||||| |||||||||||| |||| |||||||| |||| |||||||    
T  2234496 attgattttgccttcaaaatt--gattcaacttgaagctaaaaactgaagcttttgattctagaattgattttaacactcaaatttatttgttcaactca 2234593  T
Q  220 cttttacatgaatgtatccaa 240  Q
    || |||||| |||||||||||    
T  2234594 ctattacataaatgtatccaa 2234614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 26280586 - 26280691
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    |||||||||||||| ||||||  ||||| || ||||||||||| |||||| ||||||||||| |||||| ||||||  |||||||||| ||  |||||||    
T  26280586 attgattttgcctcaagaatt--gattccacttgaagctagaatttgtagtttttgattccaaaattgatttttacgtacaaatttatagttaaactcac 26280683  T
Q  221 ttttacat 228  Q
    ||||||||    
T  26280684 ttttacat 26280691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 29240646 - 29240575
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtt 115  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||| | ||||| || |||||||||||||||    
T  29240646 agtgtatgtttggttccacttttgggggaatcaaaattgattctagaggtgtaaaattgattttgacatgtt 29240575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 231
Target Start/End: Complemental strand, 5724823 - 5724626
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttgg-----ttca-------ttgattttgc 132  Q
    |||||||||||||||||||| | ||||   | |||||||||||| | |||||||| ||||| ||||||||||||     ||||       ||||||||||    
T  5724823 gtgtatgtttggttccacttctagaggggccaaaattaattctagaagtgtagaattgattctgacatgtttggatgctttcaggtagaattgattttgc 5724724  T
Q  133 ctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaa 231  Q
    ||||| ||||  |||||||| ||||||||| | ||||| ||||| |||| | |||||||||| |||||||||| |||  |  |||||||||||| |||||    
T  5724723 ctccaaaatt--gattctacttgaagctaggatttgtaactttttattctataattgatttttacacacaaatatatcatttaactcacttttatatgaa 5724626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 3482069 - 3482145
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| |||||||  |||||||||||| |||||||| ||||| || ||||| |||||||||||||||||| ||||    
T  3482069 ttgtagcctttgattttagaattgattttcacacacaagtttatagttcaacttacttttacatgaatgtattcaaa 3482145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 10400890 - 10400814
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||||||||||| ||||||||  | ||||| |||||| | ||||| || ||||||||| ||||||||||    
T  10400890 agtgtatgtttggttccactcttggaggatgcaaaattgattctagaggtgtataattgattttgatatgtttggtt 10400814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 10874475 - 10874576
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    |||||||||||||||||||||||  ||  || | ||||||||||||  |||||||||||| |||||||| |||||||  |||| ||| ||| ||||||||    
T  10874475 attgattttgcctccagaatttttctt--acataaagctagaaattagagcttttgattctagaattgatttttacattcaaacttagtgttcaactcac 10874572  T
Q  221 tttt 224  Q
    ||||    
T  10874573 tttt 10874576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 25388077 - 25388176
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||  |||| | |||||||| ||  |||||||  |||||||||||| |||| |||||||||||| |||||||||||||||| ||| ||||||||    
T  25388077 ttgattctaattgaaacaagaaattgaagtctttgattttagaattgattttgacactcaaatttattgt-caactcacttttacataaatatatccaaa 25388175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 34027475 - 34027407
Alignment:
Q  170 agcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||||||| |||||||| |||||||| |||||||||| | ||||||||| |||||||||| ||||    
T  34027475 agcttttgattctagaattgatttttacactcaaatttattattcaactcactcttacatgaatatatc 34027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 6896035 - 6895940
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||||||||||| ||| | |||||||||||||||| |||||| |||||  |||||  |||||| |   || |||||||||||||||||||||    
T  6896035 ttgattctacctgaagttaggatttgtagcttttgattctagaatttattttcgcacacgtatttatagataaattcacttttacatgaatgtatc 6895940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 9505781 - 9505860
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaat 232  Q
    ||||| ||||||||| |||||||||||| |  ||||||||| | || |||||||||||| |||| |||||||||||||||    
T  9505781 tgaagatagaaattggagcttttgattctatgattgatttttaaactcaaatttattgttcaacacacttttacatgaat 9505860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 16540107 - 16540206
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||| | |||||||||||||||   ||||||| ||| ||  ||| |||||| ||  ||||||||||||||| ||||||||||||    
T  16540107 ttgattctacttgaagctaggatttgtagcttttgattattgaattgagtttcacttacatatttatagttaaactcacttttacatcaatgtatccaaa 16540206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 882687 - 882785
Alignment:
Q  144 tgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||| |||||||| | | | ||| || |||||| | |||||||||| |||  ||||||||||||  ||||||||||| ||||||||||||||||    
T  882687 tgattctacttgaagctaaacagtctaggttctgattcaaaaattgatttttacattcaaatttattgtttaactcacttttgcatgaatgtatccaaa 882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 25195876 - 25195947
Alignment:
Q  169 tagcttttgattccagaattgattt-tacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||||||| |||||||| || ||||||||||||||| || ||||||||  |||||| ||||||||||||    
T  25195876 tagcttttgattctagaattgaattgtacacacaaatttatagttcaactcac--ttacataaatgtatccaaa 25195947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 31812203 - 31812276
Alignment:
Q  47 gtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||| ||||||||||| || | ||||| ||| || | || ||||| ||||||||||||||||||||    
T  31812203 gtatgtttggtttcacttttggagtaagcaaaattcattatagaggtctagaattgattttgacatgtttggtt 31812276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 7952809 - 7952728
Alignment:
Q  126 attttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaatt-gattttacacacaaatttat 208  Q
    |||||||||||| |||||  ||||||| |||||| || | |||||||||||||||| |||||| | ||| ||||||||||||||    
T  7952809 attttgcctccaaaattt--attctacttgaagcgaggatttgtagcttttgattctagaattgggtttcacacacaaatttat 7952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 8854902 - 8855015
Alignment:
Q  123 ttgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcact 221  Q
    |||||||| |||| |||||| |  |||||| |||||||| || |||||| |||||| |  |||||||| ||||||| |||||||||| ||  |||| |||    
T  8854902 ttgattttacctcaagaattgt--ttctacatgaagctacaatttgtagtttttgactatagaattgatttttacatacaaatttatggttgaacttact 8854999  T
Q  222 tttacatgaatgtatc 237  Q
    ||||||| ||||||||    
T  8855000 tttacattaatgtatc 8855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 8860527 - 8860599
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    ||||||||||| | |  |||||||||||| ||||| |||||||| || |||||||||||| ||||||||||||    
T  8860527 ttgtagcttttaagttaagaattgattttgacacataaatttatggttcaactcacttttgcatgaatgtatc 8860599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 30926852 - 30926765
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||||||||| || |||| |||| |||||||| |||||||| |||||||||||| ||| | |||||| ||||||| ||| ||||    
T  30926852 tgaagctagaaattggagttttttattctagaattgatttttacactcaaatttattgttcaa-ttacttttgcatgaatatattcaaa 30926765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 33136677 - 33136601
Alignment:
Q  43 tagtgtatgtttggttccacttttggaggaatccaaa-ttaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||| ||||||| ||||||||||  || ||||| ||||||||| | ||||| || ||||||||||||||||||||    
T  33136677 tagtgtatatttggtttcacttttgga--aagccaaaattaattctagaggtgtataattgattttgacatgtttggtt 33136601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 33997098 - 33997165
Alignment:
Q  53 ttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    ||||||||||||||||||||| | ||||| |||||| |  | |||||  |||||||||||||||||||    
T  33997098 ttggttccacttttggaggaaccaaaattgattctagagatttagaatcgattttgacatgtttggtt 33997165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 947594 - 947661
Alignment:
Q  170 agcttttgattccagaattgatt-ttacacacaaatttattgtacaactcacttttacatgaatgtatcc 238  Q
    |||||||||||| |||||||||| ||| ||||||  ||||  | ||||||||||||||||||||||||||    
T  947594 agcttttgattctagaattgattcttaaacacaa--ttataattcaactcacttttacatgaatgtatcc 947661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 24982342 - 24982392
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||| ||||||| |||| ||||| |||||||||||||||||| ||||    
T  24982342 ttttacactcaaattttttgttcaacttacttttacatgaatgtatacaaa 24982392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 25195468 - 25195352
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||| ||||||| |||||  |||||||| ||||||  | | |||||| |||| |||| | |||||||||| | |||||||||||   | ||||||||    
T  25195468 attgattctgcctccggaatt--gattctacttgaagc--ggatttgtagtttttcattctataattgattttcatacacaaatttacaattcaactcac 25195373  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||| ||||||||||||    
T  25195372 ttttacataaatgtatccaaa 25195352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 31303120 - 31303166
Alignment:
Q  71 gaatccaaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    ||||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  31303120 gaatcaaaattaattataaatgtgtaaaactgattttgacatgtttg 31303166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 34898697 - 34898791
Alignment:
Q  145 gattctacctgaagctagaaattgtagcttttg-attccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||| ||||||||||||||  || ||||  |||| ||||||||||||| ||| | |||||||||| ||||||||||| |||  ||||||||    
T  34898697 gattctacttgaagctagaaattagagtttttttattctagaattgattttaacactcgaatttattgttcaactcactttaacacaaatgtatc 34898791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 765471 - 765422
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatt 192  Q
    |||||||||| ||||||||  | |||||||||||||||| ||||||||||    
T  765471 ttgattctacttgaagctatgatttgtagcttttgattctagaattgatt 765422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 6654194 - 6654076
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||||| ||| |||||||   ||||||| ||||||||| | ||||||||||| |||| ||| |||||||| ||||| |||||||| || |||  |||    
T  6654194 attgatttttccttcagaatta--attctacttgaagctaggatttgtagcttttaattctagatttgattttcacacagaaatttatagttcaaaccac 6654097  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    || ||||| || | |||||||    
T  6654096 ttctacataaacgaatccaaa 6654076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 7952443 - 7952520
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    ||||| |||||| |||| |||||||||||| | | ||| | |||| | || ||||||||||||| |||||||||||||    
T  7952443 agtgtgtgtttgtttcctcttttggaggaaccaacattgactctagaggtttagaactgattttcacatgtttggttc 7952520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 7262966 - 7263030
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacat 112  Q
    ||||||||||||||||||| || ||  | ||||| |||||| | |||||||| ||||||||||||    
T  7262966 tatgtttggttccacttttagatgaggcaaaattgattctagaagtgtagaattgattttgacat 7263030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 8856362 - 8856406
Alignment:
Q  197 acacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||||||  | ||||||||||| |||||||||||||||||    
T  8856362 acacaaatttatgtttcaactcactttcacatgaatgtatccaaa 8856406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 34910970 - 34911035
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaat 232  Q
    |||||||||||||||| |||||||||||| ||||||||  |||| ||  |||| ||||||||||||||    
T  34910970 ttgtagcttttgattctagaattgattttgacacacaa--ttatagtttaactaacttttacatgaat 34911035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 32818474 - 32818356
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    |||||||||||||||||||||  |||||||  ||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||| || ||||| ||    
T  32818474 attgattttgcctccagaatt--gattctatttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaaatttatagttcaactaac 32818377  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||||||||||||||||    
T  32818376 ttttacatgaatgtatccaaa 32818356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 55927874 - 55927756
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||||||||| |||||||  ||||| || ||| |||| |||||||||||| |||||| |||||||||  | |||| |||||||||||| ||| ||||    
T  55927874 attgattttgccttcagaatt--gattccacttgaggctaaaaattgtagcttctgattctagaattgatcgtcacactcaaatttattgttcaagtcac 55927777  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||||||||||||||||    
T  55927776 ttttacatgaatgtatccaaa 55927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 10185205 - 10185293
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgat-tttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||| ||||||||| |||||||||||| | ||||||| ||||||| ||||||||||||  ||||||||||||||| ||||||||||||    
T  10185205 tgaaggtagaaattgaagcttttgattctaaaattgatctttacactcaaatttattgtttaactcacttttacattaatgtatccaaa 10185293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 8604707 - 8604608
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||  | |||||||||| ||||| |||||||||||| |||||||||||||| ||  ||  ||||||||||||||||||||||||    
T  8604707 ttgattctacttgaagctaagatttgtagctttcgattctagaattgattttcacacacaaatttatagttgaatgcacttttacatgaatgtatccaaa 8604608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 16551959 - 16552053
Alignment:
Q  145 gattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaa 240  Q
    |||||| | ||||||||| | |||||| ||||  ||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  16551959 gattctccttgaagctaggatttgtagtttttagttctagaattgatttt-cacacaaatttatagttcaactcacttttacatgaatgtatccaa 16552053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 35065044 - 35065162
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    |||||||||||||| | ||||  |||| ||| ||||||||| | ||||  |||||||||| |||||||||||| ||||||||||||||    | ||||||    
T  35065044 attgattttgcctcaataatt--gattttacttgaagctagtatttgtgacttttgattctagaattgatttttacacacaaatttatatctccactcac 35065141  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||||||||||||||||    
T  35065142 ttttacatgaatgtatccaaa 35065162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 4243406 - 4243486
Alignment:
Q  162 gaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| |||||||||||| |||||||||||| |||| |||||||||||| | |||||||||||||| ||||| ||||||    
T  4243406 gaaattggagcttttgattctagaattgatttttacactcaaatttattgttctactcacttttacatcaatgtctccaaa 4243486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 33843988 - 33844067
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaat 232  Q
    ||||||||||||||| |||||||||||| | |||||||||| |||| |||||||||||| ||||| | ||||||||||||    
T  33843988 tgaagctagaaattggagcttttgattctaaaattgattttaacactcaaatttattgttcaacttatttttacatgaat 33844067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 9064231 - 9064324
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgta 235  Q
    |||||||||| |||| |||||| |||||| ||||||||| |||||||||||| |||| ||| ||||  || |||||||||||||||| ||||||    
T  9064231 ttgattctacttgaaactagaatttgtagtttttgattctagaattgattttcacactcaagtttacggttcaactcacttttacataaatgta 9064324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 21691274 - 21691198
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||| ||  |||||||||||| |||||||||||||| || |||| ||||||||||||||| ||||||||    
T  21691274 ttgtagcttttggttgtagaattgattttcacacacaaatttatagttcaacacacttttacatgaatatatccaaa 21691198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 22250230 - 22250326
Alignment:
Q  147 ttctacctgaagctagaaattgtagcttttgattccagaattgattttac-acacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    |||||| |||||| |||||||| ||||||||||||   ||||| |||||  || |||||||||||| | | ||||||||||||||||||||||||||    
T  22250230 ttctacttgaagcaagaaattgaagcttttgattctgaaattgcttttaatactcaaatttattgttcgattcacttttacatgaatgtatccaaat 22250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 9134591 - 9134706
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcact 221  Q
    ||||||||| | |||||||||  ||| |||| |||||||| || |||||||||||||||  |||||||||||| ||||||||||||| |  ||| |  ||    
T  9134591 attgattttacttccagaatt--gatcctacttgaagctaaaatttgtagcttttgattttagaattgatttt-cacacaaatttatagctcaatttgct 9134687  T
Q  222 tttacatgaatgtatccaa 240  Q
    |||| ||||||||||||||    
T  9134688 tttaaatgaatgtatccaa 9134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 46344935 - 46344820
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcact 221  Q
    |||||||||||||||| ||||   ||||||| ||||| ||||| ||  ||||||||||||  ||| |||||||  |||||||||||  || | |||||||    
T  46344935 attgattttgcctccataatt---attctacttgaagttagaatttccagcttttgattctggaagtgatttttaacacaaatttaaagttcgactcact 46344839  T
Q  222 tttacatgaatgtatccaaa 241  Q
    ||||||| ||||||||||||    
T  46344838 tttacat-aatgtatccaaa 46344820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 45011897 - 45011973
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||||||| |||||||||||| ||||||||||||||  |   ||||||||||| |||||||||| ||||    
T  45011897 ttgtagcttttgattctagaattgattttcacacacaaatttataattttactcacttttatatgaatgtattcaaa 45011973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 29904232 - 29904327
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgat-tttacacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||||| | |||| |||||||||||||| | |||| |||| |||| ||||||| |||||||||||| ||| ||||| |||| ||||| ||||    
T  29904232 ttgattctacttaaagcaagaaattgtagcttctaattctagaactgatgtttacactcaaatttattgttcaattcactattacttgaatatatc 29904327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 47596490 - 47596416
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgatt-ttgacatgtttg 117  Q
    ||||||||| ||||| |||||||||||||||| ||||| ||| |||| ||| |||| ||||| ||||||||||||    
T  47596490 agtgtatgtatggtttcacttttggaggaatcaaaattgattttaaaggtggagaattgattgttgacatgtttg 47596416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 2635054 - 2635127
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    ||||||||||||||| ||||||| |||| | | ||||| |||||| | ||||| || |||||||||||||||||    
T  2635054 agtgtatgtttggtttcacttttagagggaccaaaattgattctagaagtgtaaaattgattttgacatgtttg 2635127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 50061732 - 50061630
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    |||||||||||||||| ||  |||||||||| ||||| ||| | |||||| ||||||||| ||| |||||||| ||||| || ||||| || |||||| |    
T  50061732 attgattttgcctccaaaa--ttgattctacttgaagttaggatttgtagtttttgattctagagttgattttcacacataattttatggttcaactcgc 50061635  T
Q  221 tttta 225  Q
    |||||    
T  50061634 tttta 50061630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 2635146 - 2635215
Alignment:
Q  124 tgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttta 195  Q
    |||||||||||||||||||  |||| | | |||||||||| |||| ||||||||| || |||||||||||||    
T  2635146 tgattttgcctccagaatt--gattatgcttgaagctagagattggagcttttgagtctagaattgatttta 2635215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 1616391 - 1616489
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatt-ttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| | |||||| || |||||||||||||||| ||||||||||   |||||||  ||||  || ||||||| |||||||||||||||| ||||    
T  1616391 ttgattctactt-aagctacaatttgtagcttttgattctagaattgattcccacacacatgtttaaagttcaactcatttttacatgaatgtattcaaa 1616489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 41058821 - 41058891
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttgg 118  Q
    ||||||||||||||||||| || ||  | ||||| |||||||| | |||||| ||||| ||||||||||||    
T  41058821 tatgtttggttccacttttagatgagcctaaattgattctaaaggagtagaattgattgtgacatgtttgg 41058891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 45694643 - 45694713
Alignment:
Q  172 cttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||| |||| |||||||||| || |||||| |||||| ||  |||||| |||||||||||||||||||||    
T  45694643 cttttaattctagaattgattctaacacacacatttatagttgaactcatttttacatgaatgtatccaaa 45694713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 26617449 - 26617519
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||||||||||| || |  |||||||| |||||||||||  ||||||||||||||  | ||||||||||    
T  26617449 attgattttgcctccaaaaat--gattctacttgaagctagaatctgtagcttttgattataaaattgatttt 26617519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 32100341 - 32100378
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacat 228  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32100341 ttttacactcaaatttattgttcaactcacttttacat 32100378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 37439156 - 37439221
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactc 218  Q
    |||||||||||||| |||||||| |||| | |||||| |||||||| ||| |||||||| ||||||    
T  37439156 tgaagctagaaattatagcttttaattctataattgatttttacactcaattttattgttcaactc 37439221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 8330127 - 8330167
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  8330127 tgaagctagaaattggagcttttgattctataattgatttt 8330167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 25927331 - 25927406
Alignment:
Q  166 ttgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||||| ||||| |||||||||||||  ||| |||||||| |  ||| |||||||||| |||||||||| ||||    
T  25927331 ttgtagcttatgatttcagaattgatttt-tacataaatttatggctcaattcacttttacgtgaatgtatcgaaat 25927406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 47144273 - 47144313
Alignment:
Q  201 aaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||||| ||||| ||||||| |||||||||||||||    
T  47144273 aaatttattgtccaactaacttttagatgaatgtatccaaa 47144313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 32927892 - 32927991
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||| | |||||||||||||||  |||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  32927892 ttgattctacttgaagctaggatttgtagcttttgattatagaattcatttttacacacaaatttatagttcaactcacttttacatgaatgtatccaaa 32927991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 35494989 - 35495089
Alignment:
Q  142 tttgattctacctgaagctagaaattgtagcttttgattccagaattg-attttacacacaaatttattgtacaactcacttttacatgaatgtatccaa 240  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||||  |||||||||||||| ||| || ||||| |||||||||||||| |||||||    
T  35494989 tttgattctacatgaagctaggatttgtagcttttgattctagaattgttttttacacacaaatctatagttcaacttacttttacatgaatatatccaa 35495088  T
Q  241 a 241  Q
    |    
T  35495089 a 35495089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 13384739 - 13384653
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacat 228  Q
    |||||||||  |||||||| || |||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||    
T  13384739 ttgattctatttgaagctaaaatttgtagcttttgattctagaattgattttcacacacaaatttatagttcaactcacttttacat 13384653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 4663007 - 4662889
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    ||||||||||| ||| ||||||  ||||||| ||||||||| | |||||||||||| ||| |||||||| |||||||||||||| ||| || |||||| |    
T  4663007 attgattttgcatccggaattt--attctacttgaagctaggatttgtagcttttgtttctagaattgatttttacacacaaatgtatagttcaactcgc 4662910  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||| | ||||||||||||||    
T  4662909 ttttccgtgaatgtatccaaa 4662889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 26100220 - 26100132
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||| | |||||||||||||||| | |||||||||| |||||||||||||| || |||||||||||||||| |||| |||||||    
T  26100220 tgaagctaggatttgtagcttttgattctataattgatttttacacacaaatttatggttcaactcacttttacataaatgcatccaaa 26100132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 16972168 - 16972050
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||||||||| |||| ||  |||| ||  ||||||||||| |||||| |||| |||  |||||||||||| | ||||||||||||||| ||| ||||    
T  16972168 attgattttgccttcagagtt--gattgtatttgaagctagaatttgtagtttttaattttagaattgatttttaaacacaaatttattgttcaaatcac 16972071  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||||||||||| ||||    
T  16972070 ttttacatgaatgtattcaaa 16972050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 37684386 - 37684504
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    |||||||||| ||||||||||  |||||||| ||||| ||| | |||| ||||||||||| | |||||||||| |  || ||||||||  | ||||||||    
T  37684386 attgattttgtctccagaatt--gattctacttgaagttaggatttgtggcttttgattctaaaattgattttaatgcaaaaatttataattcaactcac 37684483  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||| ||||||||||||    
T  37684484 ttttacataaatgtatccaaa 37684504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 15677901 - 15677810
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga--ttttacacacaaatttattgtacaactcacttttacatgaat 232  Q
    |||||||||| ||||||||| | || ||||||||||||  ||||||||  |||||||||||||||||| || ||||||| | ||||||||||    
T  15677901 ttgattctacttgaagctaggatttatagcttttgattatagaattgattttttacacacaaatttatagttcaactcattgttacatgaat 15677810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 35495151 - 35495223
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgttt 116  Q
    ||||||||||||||||||||||||||| |  | ||||| |||||| | |||||||| ||||||||||||||||    
T  35495151 agtgtatgtttggttccacttttggagcacccaaaattgattctacaagtgtagaattgattttgacatgttt 35495223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 36448006 - 36448078
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    |||||||||||||||||||||| ||| | || ||||| |||||||| |||||||| | |||||||||||||||    
T  36448006 gtgtatgtttggttccactttttgagaagtctaaattgattctaaatgtgtagaattcattttgacatgtttg 36448078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 38868498 - 38868598
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||  | |||||||||||| ||| | |||||||||| |||||||||||||| || ||||||| |||||||  |||||||| |||    
T  38868498 ttgattctacttgaagctaagatttgtagcttttggttctataattgattttcacacacaaatttatagttcaactcaattttacaataatgtatctaaa 38868597  T
Q  242 t 242  Q
    |    
T  38868598 t 38868598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 32767413 - 32767488
Alignment:
Q  169 tagcttttgattccagaattga-ttttacacacaaatttattgtacaactcactttt--acatgaatgtatccaaa 241  Q
    ||||||||||||| |||| ||| ||||||||  ||||||||||| ||||||||||||  |||||||||||||||||    
T  32767413 tagcttttgattcgagaactgacttttacacttaaatttattgttcaactcacttttacacatgaatgtatccaaa 32767488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 32736511 - 32736562
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    |||||||||||||||||| || ||| |||||||||||||||||||| |||||    
T  32736511 ttttacacacaaatttatagttcaattcacttttacatgaatgtattcaaat 32736562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 32994327 - 32994236
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatg 233  Q
    |||||||||| ||||||||  | || |||||||||| || |||||||| ||||| |||||||||||| || ||| | |||||||||||||||    
T  32994327 ttgattctacttgaagctatgatttctagcttttgagtctagaattgatttttatacacaaatttatagtgcaaatgacttttacatgaatg 32994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 5859118 - 5859057
Alignment:
Q  173 ttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatg 233  Q
    |||| ||||| ||||||||||| |||||||| ||||| || |||||||||||||||||||||    
T  5859118 tttttattcctgaattgatttttacacacaattttatggttcaactcacttttacatgaatg 5859057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 38335923 - 38335850
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatcc 238  Q
    |||| ||||||||||  |||||||||||| || |||||||||||  |  |||||||||||||||||||||||||    
T  38335923 ttgttgcttttgattttagaattgatttttacgcacaaatttatattctaactcacttttacatgaatgtatcc 38335850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 39648340 - 39648263
Alignment:
Q  43 tagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||| ||||||||||| ||||||| ||||| || ||||| |||||| |  |||| || ||||||||||||||||||||    
T  39648340 tagtatatgtttggttacacttttagaggagtcaaaattgattctagagatgtataattgattttgacatgtttggtt 39648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 44141154 - 44141052
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    |||||||||||||||| ||  |||||||||| ||||| ||| | |||||| ||||||||| ||| |||||||| ||||| || ||||| || |||||| |    
T  44141154 attgattttgcctccaaaa--ttgattctacttgaagttaggatttgtagtttttgattctagagttgattttcacacataattttatagttcaactcgc 44141057  T
Q  221 tttta 225  Q
    |||||    
T  44141056 tttta 44141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 30098921 - 30099004
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatcc 238  Q
    ||||||||||| |||||||||| ||||| |||||| |||||  ||| |||||||| ||  ||||||||||||||| ||| |||||    
T  30098921 tgaagctagaatttgtagctttcgattctagaattaatttt-tacaaaaatttatagtttaactcacttttacataaatatatcc 30099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 4554399 - 4554474
Alignment:
Q  46 tgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    ||||||||||||  |||||||||||||  ||||||| |||||| | |||||||| | |||||||||  ||||||||    
T  4554399 tgtatgtttggtatcacttttggaggagcccaaattgattctagaagtgtagaattcattttgacagatttggttc 4554474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 38537457 - 38537357
Alignment:
Q  127 ttttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcactttta 225  Q
    ||||||||||| |||| |  |||||| |||||||||||| |||| ||| |||||| ||| |||||||| |||| ||||| |||||| |||| ||| ||||    
T  38537457 ttttgcctccaaaattgt--ttctacttgaagctagaaactgtaccttctgattctagagttgattttcacactcaaatgtattgttcaacacaccttta 38537360  T
Q  226 cat 228  Q
    |||    
T  38537359 cat 38537357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 9695477 - 9695435
Alignment:
Q  190 attttacacacaaatttattgtacaactcacttttacatgaat 232  Q
    ||||||||| |||||||||| | ||||||||||||||||||||    
T  9695477 attttacactcaaatttattcttcaactcacttttacatgaat 9695435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 3279028 - 3279069
Alignment:
Q  200 caaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||| ||| |||||||||||||||||||| ||||||||    
T  3279028 caaatttaatgttcaactcacttttacatgaatatatccaaa 3279069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 8252721 - 8252762
Alignment:
Q  77 aaattaattctaaacgtgtagaactgattttgacatgtttgg 118  Q
    ||||| |||||| | |||||||||||||||||||||||||||    
T  8252721 aaattgattctagaggtgtagaactgattttgacatgtttgg 8252762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 13418904 - 13418815
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaa 231  Q
    |||||||||| | |||  |||||| | |||||||||||||| |||||||||| |||  ||||||||| || ||||||| ||| |||||||    
T  13418904 ttgattctacttaaagtaagaaatcggagcttttgattccataattgattttaacattcaaatttatcgttcaactcaatttaacatgaa 13418815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 32056259 - 32056331
Alignment:
Q  47 gtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||| |||||||| ||||| | ||||| |||||| | ||||||||| || ||||||| ||||||||    
T  32056259 gtatgtttggtttcacttttgaaggaaccaaaattgattctagatgtgtagaacaga-tttgacaagtttggtt 32056331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 35495241 - 35495359
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||| |||||||||| ||||||  |||||||| |||||||| |   | ||| || |||||| | |||||||||| | || |||||||||||| ||| ||||    
T  35495241 attaattttgcctctagaatt--gattctacttgaagctacactatctagattctgattctataattgatttttatactcaaatttattgttcaaatcac 35495338  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||  ||||||||||||||    
T  35495339 ttttatttgaatgtatccaaa 35495359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 38868766 - 38868843
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    |||||| |||| |||| | |||||||||| || ||||||||||| || | ||||||||||||||||| |||| |||||    
T  38868766 ttgtagttttttattctataattgattttcacgcacaaatttatagttctactcacttttacatgaacgtattcaaat 38868843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 2764494 - 2764454
Alignment:
Q  202 aatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||| || |||||||||||||| |||||||||||||||    
T  2764494 aatttatggttcaactcacttttacgtgaatgtatccaaat 2764454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 18355922 - 18355835
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||||| | ||||  |||||||||| | ||||||||||  |||||||||||  || |||||| ||||||||  |||||||||||||    
T  18355922 tgaagctaggatttgtgtcttttgattctaaaattgattttt-acacaaatttaaagttcaactcccttttacacaaatgtatccaaat 18355835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 24776283 - 24776211
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||||||||||||| ||  | ||||| |||||    |||||||| ||||||||| ||||||||||    
T  24776283 tatgtttggttccacttttggaagaggcgaaattgattctcggggtgtagaattgattttgatatgtttggtt 24776211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 32101130 - 32101170
Alignment:
Q  199 acaaatttattgtacaactcacttttacatgaatgtatcca 239  Q
    |||||||||| || |||||||||||||||| ||||||||||    
T  32101130 acaaatttatagttcaactcacttttacataaatgtatcca 32101170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 38123751 - 38123659
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgt 234  Q
    |||||||||| ||||||||||||||||||||| | |||| |||||||| |||||||| |||||||||||  ||||||||||||||||||||||    
T  38123751 ttgattctacttgaagctagaaattgtagcttctaattctagaattgatttttacactcaaatttattggtcaactcacttttacatgaatgt 38123659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 27571843 - 27571960
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||||| |||| ||||||  |||||||| ||||| ||||||||| |||||||||||| |||||||||||| |||| ||| |||||| | ||||||||    
T  27571843 attgattttacctcaagaatt--gattctacttgaagttagaaattggagcttttgattctagaattgattttaacactcaagtttattattcaactcac 27571940  T
Q  221 ttttacatgaatgtatccaa 240  Q
     ||||||| |||||||||||    
T  27571941 atttacataaatgtatccaa 27571960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 40491559 - 40491677
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    ||||||||||||| |||||||  || ||||| ||||| ||    |||||||||||||||| |||||||| |||||||||||||||||  ||  |||||||    
T  40491559 attgattttgccttcagaatt--gactctacttgaagttaagttttgtagcttttgattctagaattgacttttacacacaaatttaaagtttaactcac 40491656  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    |||||||||||||||||||||    
T  40491657 ttttacatgaatgtatccaaa 40491677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 41386900 - 41386795
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgat-tttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||| | ||||||||||| |||| ||||||||| |||||||||||||||||  | |||||||||||| |||||| |||  ||||    
T  41386900 ttgattctacttgaagctaggatttgtagcttttaattctagaattgatatttacacacaaatttataattcaactcacttttgcatgaacgtaaacaaa 41386801  T
Q  242 tcactt 247  Q
    ||||||    
T  41386800 tcactt 41386795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 40561843 - 40561744
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattt-tacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||| |||||||||||| || | | || |||||| |||| ||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  40561843 ttgattctacttgaagttagaaattgtagtttgtaagtctagaattaatttatacactcaaatatattgttcaactcacttttacatgaatgtatccaaa 40561744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 45557377 - 45557464
Alignment:
Q  155 gaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||||  |||||||||| |||| || ||||||||| |||||||||||| | |  |||||||||||||||||||||||||||||    
T  45557377 gaagctagaatctgtagcttttaattctaggattgatttttacacacaaatttgtagctcaactcacttttacatgaatgtatccaaa 45557464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 598030 - 597942
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatt-ttacacacaaatttattgtacaactcacttttacatgaa 231  Q
    |||||||||| |||||||| ||||||||||||| ||||| | |||||||| || |||  ||||||||||| |||||||||||||||||||    
T  598030 ttgattctacttgaagcta-aaattgtagctttcgattctataattgattcttgcactaaaatttattgttcaactcacttttacatgaa 597942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 30182381 - 30182312
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgt 211  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||| | |||||||| ||||||||||||    
T  30182381 ttgattctacttgaagctaaaaattgtagcttttgattctagaattaatttttacactcaaatttattgt 30182312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 45005001 - 45005115
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcac 220  Q
    ||||||||||||| |||||||  |||||||| |||||||| |||||| ||  |||||||  ||||||||| ||| ||| |||||||||| | ||||||||    
T  45005001 attgattttgccttcagaatt--gattctacttgaagctaaaaattggaggctttgattatagaattgatcttagcactcaaatttattattcaactcac 45005098  T
Q  221 ttttacatgaatgtatc 237  Q
    |||||||| ||| ||||    
T  45005099 ttttacataaatatatc 45005115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 38123836 - 38123765
Alignment:
Q  50 tgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    |||||||||||||||||||||||  | ||||| |||||| |  ||||||| ||||||| |||||||||||||    
T  38123836 tgtttggttccacttttggaggagccaaaattgattctagagatgtagaattgattttaacatgtttggttc 38123765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 41788316 - 41788415
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| | ||||||||||||| | ||||||| || | |||||||||| |||| |||||||  ||| ||||||||||||| || ||||||| ||||    
T  41788316 ttgattctacttaaagctagaaattgaaacttttgagtctataattgattttaacactcaaatttgctgttcaactcacttttatattaatgtatacaaa 41788415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 15050184 - 15050259
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    ||||||||||||||||||| |||||||||  | ||||| |||||| | ||| |||| |||||||||| |||||||||    
T  15050184 agtgtatgtttggttccac-tttggaggagccaaaattgattctagaagtgaagaattgattttgacctgtttggtt 15050259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 40796047 - 40795976
Alignment:
Q  170 agcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaa 240  Q
    |||||| ||||  ||||||||||||| ||| |||||||| | | ||| ||||||||||||||||||||||||    
T  40796047 agctttcgattgtagaattgattttaacactcaaatttactattcaaatcacttttacatgaatgtatccaa 40795976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 5489946 - 5489879
Alignment:
Q  126 attttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttta 195  Q
    |||||||||||| ||||  |||||||| ||| ||||||||||| |||||||||||  | |||||||||||    
T  5489946 attttgcctccaaaatt--gattctacttgatgctagaaattggagcttttgattatataattgatttta 5489879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 42816524 - 42816454
Alignment:
Q  172 cttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||| |||| |||||||||||| ||||||||||||||  | ||| |||||| ||||||||||||| ||||    
T  42816524 cttttaattctagaattgattttcacacacaaatttataattcaattcacttctacatgaatgtatgcaaa 42816454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 28725137 - 28725088
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatt 192  Q
    |||||| ||| ||||||||||| |||||||||||||||| | ||||||||    
T  28725137 ttgattatacttgaagctagaatttgtagcttttgattctataattgatt 28725088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 3016162 - 3016261
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgat-tttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||  || |||||||||||||||||||||||||||||    
T  3016162 ttgattctacttgaacttagaatttgtagcttttgattctagaattgatgtttacacataaatttacggttcaactcacttttacatgaatgtatccaaa 3016261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 30557505 - 30557601
Alignment:
Q  144 tgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||  ||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||    
T  30557505 tgattctagttgaagctaggatttgtagtttttgattctagaattgatttt-cacacaaatttatagttcaactcacttttatatgaatgtatccaaa 30557601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 1514346 - 1514442
Alignment:
Q  146 attctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| ||||||||| | ||||||||||| |||  | |||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1514346 attctacttgaagctaggatttgtagctttttattatataattgatttttacacacaaatttattgttcaactcatttttacatgaatgtatccaaa 1514442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 10325038 - 10324926
Alignment:
Q  126 attttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcactttt 224  Q
    |||||||||| ||||||  || ||||| ||||| |||||||||||||||||||||| | |||||| |||||||| ||||||||||||   ||||||||||    
T  10325038 attttgcctctagaatt--gagtctacttgaagatagaaattgtagcttttgattctataattgatttttacactcaaatttattgttatactcactttt 10324941  T
Q  225 acatgaatgtatcca 239  Q
    |||| ||||||||||    
T  10324940 acattaatgtatcca 10324926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 11049252 - 11049347
Alignment:
Q  145 gattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatcca 239  Q
    |||||||| ||||||||| | |||||||||||||||| | |||||||||| |||||||||||||| || ||| |||||||||| ||||||||||||    
T  11049252 gattctacttgaagctaggatttgtagcttttgattctaaaattgatttttacacacaaatttatagttcaagtcacttttacgtgaatgtatcca 11049347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 48549097 - 48549004
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||||||||||  | ||  ||||||||| |||||||||||||||| ||||||||    
T  48549097 ttgattctacttgaagctagaaattgtagcttctgattctagaattgatttttaa-actcatttattgttcaactcacttttacataaatgtatc 48549004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 28083973 - 28083874
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||| | ||||||||||||||||   || || ||||||||||||||||| ||||||||    
T  28083973 ttgattctacttgaagctagaatttgtagcttttgattctataattaatttttacacacaaatttcaagttcagctcacttttacatgaatatatccaaa 28083874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 7524136 - 7524212
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||||||  |||||||||||| |||||||||||||| || |||||||||||||||| ||||| ||||||    
T  7524136 ttgtagcttttgattatagaattgatttttacacacaaatttatagttcaactcacttttacataaatgtgtccaaa 7524212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 213602 - 213523
Alignment:
Q  163 aaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| ||||||||||| |||||||||||| | || ||||||| |||| ||||||||||||||||||||| |||||||    
T  213602 aaattgtggcttttgattctagaattgatttttaaactcaaatttgttgttcaactcacttttacatgaatgcatccaaa 213523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 30850483 - 30850393
Alignment:
Q  144 tgattctacctgaagctagaaattgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatg 233  Q
    ||||||||| |||| |||| | |||||| |||| |||  ||||||||||||| || |||||||||| || |||||||||||||||||||||    
T  30850483 tgattctacttgaaactaggatttgtagtttttaattttagaattgattttaacatacaaatttatagttcaactcacttttacatgaatg 30850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 3515820 - 3515869
Alignment:
Q  145 gattctacctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  3515820 gattctacttgaagctagaaattgtagcttttcattctagaattgatttt 3515869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 6021785 - 6021891
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    |||||||||||||| |||||   |||||||| ||||||||| |  ||||||||||||||| | ||| |||||| |||| ||| ||||| || ||||||||    
T  6021785 attgattttgcctctagaatc--gattctacttgaagctaggatatgtagcttttgattctataatagatttttacactcaagtttatggttcaactcac 6021882  T
Q  221 ttttacatg 229  Q
    |||||||||    
T  6021883 ttttacatg 6021891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 26373612 - 26373535
Alignment:
Q  157 agctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtat 236  Q
    |||| ||| |||||||||||||||| |||||||||||||  ||||||||||   | || |||||||||||||||||||||    
T  26373612 agcttgaacttgtagcttttgattctagaattgatttta--cacaaatttaaaattcatctcacttttacatgaatgtat 26373535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 28287417 - 28287337
Alignment:
Q  147 ttctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttac 226  Q
    |||||| |||||| || | |||||||||||||||  |||||||||||| |||| |||||||||||| ||||| ||||||||    
T  28287417 ttctacttgaagcaaggatttgtagcttttgattttagaattgattttaacactcaaatttattgttcaactaacttttac 28287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 34915089 - 34915165
Alignment:
Q  166 ttgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||||||| |||||||||| || ||||| | |||||  | |||||||||||||||||||||||| ||||    
T  34915089 ttgtagcttttgattctagaattgattctaacacaccattttataattcaactcacttttacatgaatgtattcaaa 34915165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 7790727 - 7790644
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcactttta 225  Q
    |||||||||| ||||| ||  | |||||| ||| ||||| | |||||||||| ||||||||||||||||| |||||||||||||    
T  7790727 ttgattctacttgaagttatgatttgtagatttagattctataattgatttttacacacaaatttattgttcaactcactttta 7790644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 8381966 - 8382049
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcactttta 225  Q
    |||||||||| ||||||||||||||||||| | |  ||| |||||||| |||||||  ||| |||||||| |||||||||||||    
T  8381966 ttgattctacttgaagctagaaattgtagcctctagttctagaattgatttttacattcaagtttattgttcaactcactttta 8382049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 20026249 - 20026166
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattt-tacacacaaatttattgtacaactcactttta 225  Q
    |||||||||| ||||||||||||||  ||||||| | || |||||||||||  |||| |||||||||||| ||| |||||||||    
T  20026249 ttgattctacttgaagctagaaattcaagcttttaactctagaattgatttgaacactcaaatttattgttcaattcactttta 20026166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 47892472 - 47892421
Alignment:
Q  144 tgattctacctgaagctagaaattgtagcttttgattccagaattgatttta 195  Q
    ||||||||| | ||||||||||||| |||||||||||| |||||||||||||    
T  47892472 tgattctacttaaagctagaaattgaagcttttgattctagaattgatttta 47892421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 20721108 - 20721054
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaa 99  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| | ||||||||    
T  20721108 gtgtatgttttgttccacttttggaggaatcaaaattgattctagaggtgtagaa 20721054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 47321991 - 47321902
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaat 232  Q
    |||||| ||| ||||||||||| ||| || |||| |||| |||||||||||| | |||||||||||| || ||| ||||||||||||||||    
T  47321991 ttgattatacttgaagctagaatttgcag-ttttaattctagaattgattttcatacacaaatttatagttcaattcacttttacatgaat 47321902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 4458405 - 4458486
Alignment:
Q  162 gaaattgtagcttttgattccagaattg-attttacacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||| || |||| |||| ||||||| |||| ||||   |||||||||||||| |||||||||| |||||||||||||||    
T  4458405 gaaattgaagttttttattctagaattggatttaacacttgaatttattgtacaattcacttttacctgaatgtatccaaat 4458486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 9939832 - 9939719
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    |||||||||||| | ||||||  ||||||||   |||||| |||||||||||| | |||||  |||||| |||||||| |||||||||| | ||||||||    
T  9939832 attgattttgcccctagaatt--gattctactataagctaaaaattgtagcttctaattccttaattgaattttacactcaaatttattattcaactcac 9939735  T
Q  221 ttttacatgaatgtatc 237  Q
     |||||||||| |||||    
T  9939734 -tttacatgaacgtatc 9939719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 8130851 - 8130911
Alignment:
Q  46 tgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattt 106  Q
    ||||||||||||||||||| |||||||  | ||||| |||||||| |||||||| ||||||    
T  8130851 tgtatgtttggttccacttctggaggagccaaaattgattctaaaagtgtagaattgattt 8130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 32088763 - 32088691
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||| |||||| ||||||| | || || ||||||||  ||||||| || ||||||||||||||||||||    
T  32088763 tatgtttgattccacgtttggagcagtcaaagttaattctggacgtgtaaaattgattttgacatgtttggtt 32088691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 33693032 - 33693072
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  33693032 tgaagctagaaattgtagcttttgattctataattgatttt 33693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 41516883 - 41516946
Alignment:
Q  49 atgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacat 112  Q
    |||||||||||||||||||||||| || ||||  |||||| | |||||||| ||||| ||||||    
T  41516883 atgtttggttccacttttggaggagtcaaaatccattctagaggtgtagaattgattatgacat 41516946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 1233354 - 1233400
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||| ||||||||||||  |||||||||| |||||||||||||    
T  1233354 ttttacactcaaatttattgttgaactcactttcacatgaatgtatc 1233400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 8381882 - 8381952
Alignment:
Q  51 gtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    ||||||||| |||| ||||||| || ||||| |||||| | || || || |||||||||||||||||||||    
T  8381882 gtttggttcgacttctggaggagtcaaaattgattctagaggtataaaattgattttgacatgtttggttc 8381952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 14105101 - 14105035
Alignment:
Q  43 tagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttga 109  Q
    |||||||||||| ||||||||||||||| | || ||||| |||||| | ||||||||  ||||||||    
T  14105101 tagtgtatgtttagttccacttttggagaattcaaaattgattctacatgtgtagaatagattttga 14105035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 20720827 - 20720901
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttaca 227  Q
    |||| |||||||||||| ||| |||||| |||||||| |||||||  |||||||||  | |||||||||||||||    
T  20720827 tgaatctagaaattgtaacttatgattctagaattgatttttacaatcaaatttatccttcaactcacttttaca 20720901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 40663061 - 40663000
Alignment:
Q  146 attctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttat 208  Q
    ||||||| | ||||||| | |||||||||||||||| |||||||| || ||||||||||||||    
T  40663061 attctacttaaagctagtatttgtagcttttgattcaagaattga-ttaacacacaaatttat 40663000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 52263683 - 52263633
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||| ||||||||||||  |||||| |||||||| ||||||||||||    
T  52263683 ttttacactcaaatttattgtttaactcagttttacattaatgtatccaaa 52263633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 11817359 - 11817302
Alignment:
Q  185 aattgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||||||  |||||||||||| || ||||| |||||||||| ||||||| |||||    
T  11817359 aattgattttttacacaaatttatagttcaactaacttttacattaatgtattcaaat 11817302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 31362280 - 31362239
Alignment:
Q  153 ctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||| ||||| |||||||||||||||| ||||||||||||    
T  31362280 ctgaagttagaatttgtagcttttgattctagaattgatttt 31362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 49079408 - 49079331
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    |||||||||||| ||||||||||||||   || ||||  |||| | | |||||||  |||||||||||||||||||||    
T  49079408 agtgtatgtttgattccacttttggagtgctcaaaatcgattccagaggtgtagagttgattttgacatgtttggttc 49079331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 3416103 - 3416179
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||| |||| |||  |||||||||||| |||||||||||||| ||  |||||| ||||| ||| |||||||||||    
T  3416103 ttgtagttttttattttagaattgatttttacacacaaatttatagtttaactcaattttatatggatgtatccaaa 3416179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 24587910 - 24588001
Alignment:
Q  144 tgattctacctgaagct-agaaattgtagcttttgattcc--agaattgatttta-cacacaaatttattgtacaactcacttttacatgaa 231  Q
    ||||||||| ||||| | ||| |||| ||||||||||||   | ||||||||||| ||| |||||||||| | |||||||||||||||||||    
T  24587910 tgattctacttgaagtttagatattggagcttttgattctctataattgattttaacactcaaatttattattcaactcacttttacatgaa 24588001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 27500334 - 27500374
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaa 231  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  27500334 ttttacactcaaatttattgttcaactcatttttacatgaa 27500374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 242
Target Start/End: Original strand, 47053476 - 47053504
Alignment:
Q  214 aactcacttttacatgaatgtatccaaat 242  Q
    |||||||||||||||||||||||||||||    
T  47053476 aactcacttttacatgaatgtatccaaat 47053504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 7717425 - 7717320
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcact 221  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||  ||      ||||||| |||||||||||| |||||||||    
T  7717425 attgattttgcctccagaatt--gattctacttgaagctagaaattgtagcttctgattctcga------tttacactcaaatttattgttcaactcact 7717334  T
Q  222 tttacatgaatgta 235  Q
    | ||||||||||||    
T  7717333 tctacatgaatgta 7717320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 52925814 - 52925729
Alignment:
Q  35 atattatttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||| |||||||||||||| |||||||||||||||||| || ||||| |||||| | ||||| || ||||||||||||||||||||    
T  52925814 atataatttagtgtatgttcggttccacttttggaggagtcaaaattgattctagaggtgtataattgattttgacatgtttggtt 52925729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 31708301 - 31708225
Alignment:
Q  166 ttgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||||||| |||||||||| || |||||||||||||  | |||||||||||||||||||||||||||||    
T  31708301 ttgtagcttttgattctagaattgattctaacacacaaatttataattcaactcacttttacatgaatgtatccaaa 31708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 36302164 - 36302280
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcac 220  Q
    ||||||||||||| |||| ||  |||||||  |||||||||| |||| || ||||||||  ||||||||||||| |||  ||||||||||| ||||||||    
T  36302164 attgattttgccttcagagtt--gattctatttgaagctagagattggagattttgattttagaattgattttagcacttaaatttattgttcaactcac 36302261  T
Q  221 ttttacatgaatgtatcca 239  Q
    ||||||||||||| |||||    
T  36302262 ttttacatgaatgaatcca 36302280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 27266876 - 27266790
Alignment:
Q  146 attctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaa 231  Q
    ||||||| ||||||||||||||||||||  |||||| |||||| ||||| |||| |||||||||||| ||||| |||||||||||||    
T  27266876 attctacttgaagctagaaattgtagctaatgattcaagaattaatttttacactcaaatttattgttcaactaacttttacatgaa 27266790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 35058342 - 35058445
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaat-ttattgtacaactca 219  Q
    |||||||||||||| ||||||  |||||||| || |||||||||||  |||||||||||| |||||||||||| |||| ||||| ||||||| |||||||    
T  35058342 attgattttgcctcaagaatt--gattctacttggagctagaaattcgagcttttgattctagaattgattttaacactcaaatattattgttcaactca 35058439  T
Q  220 ctttta 225  Q
    ||||||    
T  35058440 ctttta 35058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 35264495 - 35264397
Alignment:
Q  144 tgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||||| |||| |||||||||  |||||||||||| |||||||||||| ||||  ||||||||||| ||| ||| ||||||||||||||| |||||    
T  35264495 tgattctacttgaaactagaaattagagcttttgattctagaattgattttaacacttaaatttattgttcaagtcatttttacatgaatgtacccaaa 35264397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 25359678 - 25359560
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac 220  Q
    ||||||| |||||||||||||  |||||||| ||||| ||||| |||||| |||| |||| | |||||||||| ||||||| |||||||||  || ||||    
T  25359678 attgattctgcctccagaatt--gattctacttgaagttagaatttgtagttttttattctataattgattttcacacacatatttattgttaaaatcac 25359581  T
Q  221 ttttacatgaatgtatccaaa 241  Q
    || || |||||||||||||||    
T  25359580 ttctatatgaatgtatccaaa 25359560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 39256566 - 39256639
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    ||||| ||||||||||||||||||||| |||| |||||| ||||| | |||||||| |||||||||||||||||    
T  39256566 agtgtgtgtttggttccacttttggagaaatcaaaattagttctagaggtgtagaattgattttgacatgtttg 39256639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 3776524 - 3776620
Alignment:
Q  145 gattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaa 240  Q
    |||||||| |||| |||||||||||||||| |||||| |||||| | |||||||| ||||||| |||   ||||||||||||||| |||||||||||    
T  3776524 gattctacttgaatctagaaattgtagcttctgattctagaattaatttttacactcaaatttgttgctgaactcacttttacatcaatgtatccaa 3776620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 3845305 - 3845233
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    |||||||||||||||||||||||||| || | ||||| |||||| | |||||||| |||||||||||||||||    
T  3845305 gtgtatgtttggttccacttttggagtaaccaaaattgattctagaggtgtagaattgattttgacatgtttg 3845233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 5406887 - 5407003
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcact 221  Q
    |||||||||||||| |||||   ||||||||  |||||||||||| ||||||| |||||  ||||||||||||  | ||||||||| | | ||| |||||    
T  5406887 attgattttgcctctagaatg--gattctactcgaagctagaaatggtagcttctgattatagaattgatttttaa-acaaatttactcttcaaatcact 5406983  T
Q  222 tttacatgaatgtatccaaa 241  Q
    ||||||||||||||||||||    
T  5406984 tttacatgaatgtatccaaa 5407003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 1441574 - 1441499
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||||||||||||||||| || | |||||| ||||| | |||||||| ||| ||||||||||||||||    
T  1441574 gtgtatgtttggttccacttttggagtaaccaaaattatttctagaggtgtagaattgagtttgacatgtttggtt 1441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 46853592 - 46853523
Alignment:
Q  170 agcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatcc 238  Q
    |||||||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||| ||| |||||    
T  46853592 agcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttacataaatatatcc 46853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 37335138 - 37335025
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcac 220  Q
    |||||||||||||| ||||||  |||| |||  |||| ||||||| |||||||||||||| |||||||| ||||||||   |||| ||||| |||||||     
T  37335138 attgattttgcctcgagaatt--gattttactagaagttagaaatcgtagcttttgattctagaattgatttttacacttgaattcattgttcaactcat 37335041  T
Q  221 ttttacatgaatgtat 236  Q
    ||||| ||||||||||    
T  37335040 ttttatatgaatgtat 37335025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 40147935 - 40147836
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattt-tacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| | ||||||||| ||| |||||||||||| |||||||||||  ||||   |||||||  | |||||||||||||||| ||||||||||||    
T  40147935 ttgattctacttcaagctagaatttggagcttttgattctagaattgatttcaacacttgaatttatcattcaactcacttttacattaatgtatccaaa 40147836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 3776430 - 3776507
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    ||||||| |||||||||||||||||||||  | |||||  || || | |||||||| |||||||||||||||||||||    
T  3776430 agtgtatatttggttccacttttggaggagacaaaattggttatagaggtgtagaattgattttgacatgtttggttc 3776507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 35253541 - 35253452
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||| ||||| ||||||| || ||| |||||||||||| |||| |||||||||  | |||||||||||||||||| ||| |||||||    
T  35253541 tgaagctggaaatagtagcttctggttctagaattgatttttacactcaaatttatcattcaactcacttttacatgattgtttccaaat 35253452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 41596211 - 41596135
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||||||  |||||||||||| |||||||| ||||| ||   |||||||||| ||||||||||||||||    
T  41596211 ttgtagcttttgattaaagaattgatttttacacacaagtttatagtttgactcacttttccatgaatgtatccaaa 41596135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 51285450 - 51285518
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacat 112  Q
    ||||||||||||||||||||||| ||| |  | |||||||||||| | |||||||| ||||||||||||    
T  51285450 agtgtatgtttggttccactttttgagtagccgaaattaattctagaggtgtagaattgattttgacat 51285518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 44958710 - 44958622
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgt 211  Q
    |||||||||||||||||| ||  ||||||||  || ||||||||||| |||||||||||| |||| ||||||| |||| ||| ||||||||    
T  44958710 attgattttgcctccagagtt--gattctactcgatgctagaaattggagcttttgattctagaaatgattttaacactcaactttattgt 44958622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 31492790 - 31492832
Alignment:
Q  166 ttgtagcttttgattccagaattgattttacacacaaatttat 208  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  31492790 ttgtagcttttgattctagaattgatttaacacacaaatttat 31492832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 30301103 - 30300997
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttga-ttccagaattgatttta-cacacaaatttattgtacaactca 219  Q
    |||||||||||||||| ||||  || ||||  ||||||||||||||| || |||| | ||| ||||||| ||||| ||| |||||||||||| |||| ||    
T  30301103 attgattttgcctccaaaatt--gactctatttgaagctagaaattggagttttttaattctagaattggttttaacactcaaatttattgttcaaccca 30301006  T
Q  220 cttttacat 228  Q
    |||||||||    
T  30301005 cttttacat 30300997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 44771675 - 44771745
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||| |||||||||| |||||  |||||||||| || |||||| |||||||||||||||| | ||||||||||    
T  44771675 attggttttgcctccggaatt--gattctacctaaatctagaatttgtagcttttgattctaaaattgatttt 44771745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 48089887 - 48089819
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgttt 116  Q
    |||||||| || ||||||||||||| || ||||| |||||| | || |||||||||||| |||||||||    
T  48089887 tatgtttgttttcacttttggaggagtcaaaatttattctagaggtatagaactgatttagacatgttt 48089819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 584877 - 584779
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||||  ||  |||||| |||||  | ||||||||||||| ||||||||||||    
T  584877 ttgattctac-tgcagctagaaattgtagctttaaattcttgaattgatttttgcagtcaaattaattgtttagctcacttttacataaatgtatccaaa 584779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 34867380 - 34867309
Alignment:
Q  44 agtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtt 115  Q
    |||||||||||||||||||||||  || |  | ||||| |||||| | |||||||| |||||||||||||||    
T  34867380 agtgtatgtttggttccacttttacagaagccgaaattgattctacaggtgtagaattgattttgacatgtt 34867309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 38332627 - 38332540
Alignment:
Q  155 gaagctagaaattgtagcttttgattccagaattgat-tttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| |||||| ||||| |||||| | ||||| | ||||||| |||||||||||| ||||||| || | ||||||||||| ||||    
T  38332627 gaagctacaaattggagcttctgattctaaaattggtatttacactcaaatttattgttcaactcatttatccatgaatgtatacaaa 38332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 51285597 - 51285668
Alignment:
Q  170 agcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaa 240  Q
    |||||||||||| ||||||||||||  ||| ||||||| ||||  ||| | |||||||||||||||||||||    
T  51285597 agcttttgattctagaattgatttttgcactcaaatttgttgtttaacccgcttttacatgaatgtatccaa 51285668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 32523402 - 32523336
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaa 231  Q
    |||||||||||||||| | |||||||||| |||||||||||||  ||  ||||||||| ||||||||    
T  32523402 ttgtagcttttgattctaaaattgatttttacacacaaatttagagtttaactcacttatacatgaa 32523336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 43661883 - 43661933
Alignment:
Q  187 ttgatttt-acacacaaatttattgtacaactcacttttacatgaatgtat 236  Q
    |||||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  43661883 ttgattttcacacataaatgtattgttcaactcacttttacatgaatgtat 43661933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 190875 - 190924
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaatgtatccaa 240  Q
    |||| ||| |||||||||||| ||||||||||| || |||||||||||||    
T  190875 ttttgcactcaaatttattgttcaactcactttcacgtgaatgtatccaa 190924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 829786 - 829855
Alignment:
Q  49 atgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttgg 118  Q
    ||||| ||||||||||||||| ||| | ||||| |||||| | ||||| || |||||||||||| |||||    
T  829786 atgttaggttccacttttggatgaaccaaaattcattctacatgtgtaaaagtgattttgacatatttgg 829855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 1290675 - 1290748
Alignment:
Q  47 gtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||||||||| | ||||||   ||||| |||||| | |||||||| |||||||||  |||||||||    
T  1290675 gtatgtttggttccacttctagaggaactaaaattgattctagaggtgtagaattgattttgatttgtttggtt 1290748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 4526155 - 4526224
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgt 234  Q
    ||||| |||||||||  | |||||||||| |||||||||||||| || |||| ||||||||||| |||||    
T  4526155 ttgtaacttttgattttaaaattgatttttacacacaaatttatagttcaacacacttttacataaatgt 4526224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 52141320 - 52141239
Alignment:
Q  156 aagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtat 236  Q
    ||||||| | ||||||| || ||||| |||||| ||||| ||||||| | |||| || ||||||||||||| ||||||||||    
T  52141320 aagctaggatttgtagcattcgattctagaattaattttcacacacataattatagttcaactcacttttatatgaatgtat 52141239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 584985 - 584909
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    ||||||||||||| |||||||||||| || | ||||| |||||| | ||| |||  ||||||||| |||||| ||||    
T  584985 gtgtatgtttggtcccacttttggagtaaccaaaattgattctagaggtgcagagttgattttgatatgttttgttc 584909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 7262873 - 7262909
Alignment:
Q  201 aaatttattgtacaactcacttttacatgaatgtatc 237  Q
    |||||||| || |||||||||||||||||||||||||    
T  7262873 aaatttatcgtccaactcacttttacatgaatgtatc 7262909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 31013041 - 31013117
Alignment:
Q  166 ttgtagcttttgattccagaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    ||||||| ||||| || |||||||||| || ||||||||||||   | |||||||||| |||||||||| |||||||    
T  31013041 ttgtagcctttgaatctagaattgattctaacacacaaatttagaattcaactcacttgtacatgaatgcatccaaa 31013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 9818717 - 9818826
Alignment:
Q  124 tgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattga--ttttacacacaaatttattgtacaactcact 221  Q
    |||||||||||||| ||||  |||||||| ||||||||  | |||||||||||||||| ||||||||  ||||| |||||||||||| || |||||||||    
T  9818717 tgattttgcctccataatt--gattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcact 9818814  T
Q  222 tttacatgaatg 233  Q
    |||| |||||||    
T  9818815 tttatatgaatg 9818826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 6951390 - 6951290
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgattt-tacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||| ||| | |||||||||||||||| | ||||||||| |||||| ||||||||  | ||| |||||||||||||||| ||||||||    
T  6951390 ttgattctacttgaagttaggatttgtagcttttgattctataattgatttgtacacataaatttataattcaattcacttttacatgaatttatccaaa 6951291  T
Q  242 t 242  Q
    |    
T  6951290 t 6951290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 34250540 - 34250340
Alignment:
Q  49 atgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt------------cattgattttgcctcc 136  Q
    ||||||||||||||||||| |||| |   |||| |||||| | |||||||| || |||||||||||||||||             ||||||| ||||||     
T  34250540 atgtttggttccacttttgaaggagttataattgattctagatgtgtagaattgtttttgacatgtttggtttctctagagtagaattgattatgcctct 34250441  T
Q  137 agaattttgattctacctgaagctagaaattgtagcttttgattccagaattgattttacacacaaatttattgtacaactcacttttacatgaatgtat 236  Q
    ||||  |||||||||| ||| |||||||||||||||||||||||| | ||||| |||| ||||||||||| |||| ||||| ||||||  |||||||| |    
T  34250440 agaa--ttgattctacttgatgctagaaattgtagcttttgattctacaattg-tttttcacacaaattttttgttcaacttactttt-tatgaatgttt 34250345  T
Q  237 ccaaa 241  Q
    |||||    
T  34250344 ccaaa 34250340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 18851167 - 18851068
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||  | |||||||||||||||  |||||||||||| ||||||| |||||| ||  ||||||||||||||||||  ||||||||    
T  18851167 ttgattctacttgaagctatgatttgtagcttttgattatagaattgattttcacacacatatttatagttaaactcacttttacatgaagttatccaaa 18851068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 36639918 - 36640026
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattg-attttacacacaaatttattgtacaactcac 220  Q
    |||||||||||||||| |||   |||||||| ||||||| ||||||||||||| | |||| |||||||  |||||||| |||||||| ||| || |||||    
T  36639918 attgattttgcctccaaaata--gattctacttgaagctggaaattgtagcttctaattctagaattgttttttacactcaaatttaatgttcacctcac 36640015  T
Q  221 ttttacatgaa 231  Q
    |||||||||||    
T  36640016 ttttacatgaa 36640026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 3043196 - 3043126
Alignment:
Q  46 tgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgttt 116  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||| | |||||||| ||||||||||||||||    
T  3043196 tgtatgtctggttccacttatggaggaatcaaaattgattctagaggtgtagaattgattttgacatgttt 3043126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 38845443 - 38845543
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcac-ttttacatgaatgtatccaa 240  Q
    |||||||||| ||||||||  | |||||| ||||||||| |||||||||||| |||||||||| ||| ||  ||||||| |||||||||||| |||||||    
T  38845443 ttgattctacttgaagctaagatttgtagtttttgattctagaattgattttcacacacaaatatatagttaaactcactttttacatgaatatatccaa 38845542  T
Q  241 a 241  Q
    |    
T  38845543 a 38845543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 15368136 - 15368211
Alignment:
Q  46 tgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggttc 121  Q
    |||||||||||||||||||||||||||  | ||||| |||||| |  ||||||| |||||||||||||| ||||||    
T  15368136 tgtatgtttggttccacttttggaggagccaaaattgattctagatatgtagaattgattttgacatgtatggttc 15368211  T

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Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 29922782 - 29922861
Alignment:
Q  41 tttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    ||||||||||||||  |||||||||| ||||| || ||||| ||||||   |||||||| ||||||||||||||||||||    
T  29922782 tttagtgtatgtttacttccactttttgaggagtcaaaattgattctagtagtgtagaattgattttgacatgtttggtt 29922861  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 42858108 - 42858207
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||| ||| ||||| ||| | ||| ||||||| |||| | |||||||||| |||||||||||||| || |||||||||||||||||||| ||| ||||    
T  42858108 ttgattttacttgaagttaggatttggagcttttaattctataattgattttcacacacaaatttatagttcaactcacttttacatgaatttattcaaa 42858207  T

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Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 10898770 - 10898810
Alignment:
Q  191 ttttacacacaaatttattgtacaactcacttttacatgaa 231  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10898770 ttttacacacaaatttattgttcaactcacttttacatgaa 10898810  T

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Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 3970505 - 3970434
Alignment:
Q  122 attgattttgcctccagaattttgattctac-ctgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    |||||||||||||||||||||  |||||||  |||||||||| ||||||||||||||| |||| | ||||||||    
T  3970505 attgattttgcctccagaatt--gattctaatctgaagctaggaattgtagcttttgactccaaacttgatttt 3970434  T

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Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 22226321 - 22226227
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgtacaactcacttttacatgaatgtat 236  Q
    |||||||||| ||||| ||| | |||||||||||||||  |||||| | |||||||||||||||||  || | ||| |||||||||| |||||||    
T  22226321 ttgattctacttgaagatagtatttgtagcttttgattttagaattaacttttacacacaaatttagagttcgactaacttttacattaatgtat 22226227  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 10860013 - 10859942
Alignment:
Q  46 tgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    |||||||||||||||||||||||| ||  | ||||| ||| || | |||||||| |||||||||| ||||||    
T  10860013 tgtatgtttggttccacttttggaagaggcaaaattcattatagaggtgtagaaatgattttgacctgtttg 10859942  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 15368489 - 15368572
Alignment:
Q  159 ctagaaattgtagcttttgattccagaattgat-tttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||| ||||||||| |||||| | ||||||| ||||||| ||||| | |||| ||| ||||||||||||| |||||| ||||    
T  15368489 ctagaagttgtagcttctgattctataattgatctttacactcaaatatgttgttcaagtcacttttacatggatgtattcaaa 15368572  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 24306170 - 24306112
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgt 211  Q
    ||||| ||||||||||| |||||||||| | |||||| |||||||| ||||||||||||    
T  24306170 tgaagttagaaattgtaacttttgattctataattgatttttacactcaaatttattgt 24306112  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 24367146 - 24367204
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattga-ttttacacacaaatttattgt 211  Q
    ||||| ||||||||||| |||||||||| | |||||| |||||||| ||||||||||||    
T  24367146 tgaagttagaaattgtaacttttgattctataattgatttttacactcaaatttattgt 24367204  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 28973753 - 28973823
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttgg 118  Q
    |||||||||||| | ||||||||||  | ||||| |||||| | |||||||| ||||||||| ||||||||    
T  28973753 tatgtttggttctagttttggaggagcctaaattgattctagatgtgtagaattgattttgatatgtttgg 28973823  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 4306558 - 4306611
Alignment:
Q  188 tgattttacacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||||  ||||||||||| ||| ||  |||||||||||||||||||||    
T  4306558 tgattttacacttaaatttattgttcaattcttttttacatgaatgtatccaaa 4306611  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 28110500 - 28110431
Alignment:
Q  166 ttgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgt 234  Q
    ||||| |||||||||  |||||||||||| |||||||||||||| ||  |||||||||||| || |||||    
T  28110500 ttgtaacttttgattttagaattgattttcacacacaaatttatagttgaactcacttttatataaatgt 28110431  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 8591521 - 8591581
Alignment:
Q  183 agaattgatttta-cacacaaatttattgtacaactcacttttacatgaatgtatccaaat 242  Q
    ||||||||||||  ||| ||||||| |||| ||||||||||||| | ||||||||||||||    
T  8591521 agaattgattttttcactcaaatttgttgttcaactcacttttataggaatgtatccaaat 8591581  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 10898629 - 10898689
Alignment:
Q  60 cacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||||||| ||||| |||||| |  ||| ||| | ||||||||||||||||||    
T  10898629 cacttttggaggaatcaaaattgattctagagctgtcgaattaattttgacatgtttggtt 10898689  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 37019644 - 37019604
Alignment:
Q  77 aaattaattctaaacgtgtagaactgattttgacatgtttg 117  Q
    ||||||||| |||||||||| || |||||||||||||||||    
T  37019644 aaattaattataaacgtgtaaaattgattttgacatgtttg 37019604  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 39097159 - 39097231
Alignment:
Q  48 tatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    ||||||||||| ||||||| |||  | | ||||| ||| || | |||||||| ||||||||||||||||||||    
T  39097159 tatgtttggtttcacttttagagagaccgaaattgattatagaggtgtagaattgattttgacatgtttggtt 39097231  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 43310614 - 43310574
Alignment:
Q  154 tgaagctagaaattgtagcttttgattccagaattgatttt 194  Q
    ||||| |||||||||||||||||||||  ||||||||||||    
T  43310614 tgaagatagaaattgtagcttttgattatagaattgatttt 43310574  T

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Target: scaffold0361 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 14198 - 14100
Alignment:
Q  143 ttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgtacaactcacttttacatgaatgtatccaaa 241  Q
    |||||||||| ||||||||| |||  |||||| |||||| |||||||||||| |||| |||||||||| | ||||||||||| |||||||||||||||||    
T  14198 ttgattctacttgaagctagcaatc-tagcttatgattctagaattgatttttacactcaaatttatttttcaactcactttcacatgaatgtatccaaa 14100  T

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Target: scaffold0361; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 14309 - 14242
Alignment:
Q  42 ttagtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttga 109  Q
    |||||||||||||||||||||||||||| ||  | ||||| | |||| | |||||||| |||||||||    
T  14309 ttagtgtatgtttggttccacttttggaagagccaaaattgaatctagatgtgtagaattgattttga 14242  T

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Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 31807 - 31928
Alignment:
Q  122 attgattttgcctccagaattttgattctacctgaagctagaaattgtagcttttgattccagaattgatttt-acacacaaatttattgt---acaact 217  Q
    ||||||| |||||||| ||||  |||| ||| ||||||||| | |||||||||||||||   ||||||||||| ||| ||| |||||| ||   ||||||    
T  31807 attgattctgcctccaaaatt--gattatacttgaagctaggatttgtagcttttgattattgaattgattttcacatacatatttatagttaaacaact 31904  T
Q  218 cacttttacatgaatgtatccaaa 241  Q
    ||||||||||| ||||||||||||    
T  31905 cacttttacataaatgtatccaaa 31928  T

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Target: scaffold0168; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 31718 - 31793
Alignment:
Q  45 gtgtatgtttggttccacttttggaggaatccaaattaattctaaacgtgtagaactgattttgacatgtttggtt 120  Q
    |||||||||||||||||||| | |||  | | ||||| |||||| | |||||||| ||||| ||||||||||||||    
T  31718 gtgtatgtttggttccacttctagagtgaccaaaattgattctagaggtgtagaattgattctgacatgtttggtt 31793  T

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