View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1457_1D_low_6 (Length: 397)
Name: NF1457_1D_low_6
Description: NF1457_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457_1D_low_6 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 25 - 397
Target Start/End: Complemental strand, 14163025 - 14162653
Alignment:
| Q |
25 |
cttcaagctgttgcggtgctaaaacttcgtcaacaaccgatcttgctagaaacatagcaagatcttcaacaactacaggattgtctaaagcagtatcatc |
124 |
Q |
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| T |
14163025 |
cttcaagctgttgcggtgctaaaacttcgtcaacaaccgatcttgctagaaacatagcaagatcttcaacaactacaggattgtctaaagcagtatcatc |
14162926 |
T |
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| Q |
125 |
tgctgattcaattagcatcacaaaaccattgacaacatcgtcaggtggaaaacaaagcgatgaaagtaacaccgaagccatttctttctctctattcttt |
224 |
Q |
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| T |
14162925 |
tgctgattcaattagcatcacaaaaccattgacaacatcgtcaggtggaaaacaaagcgatgaaagtaacaccgaagccatttctttctctctattcttt |
14162826 |
T |
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| Q |
225 |
ctatccattgctaatgttattagctttttcacgaagattgcatttagttcaccacagtttttgttgttctcttgttctaaacaactaatcacttcaaata |
324 |
Q |
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| T |
14162825 |
ctatccattgctaatgttattagctttttgacgaagattgcatttagttcaccacagtttttgttgttctcttgttctaaacaactaatcacttcaaata |
14162726 |
T |
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| Q |
325 |
tatcacctgataaaaagtactcttgaatgatggattgagttttcatcttgaaacttttagcaacattttcttg |
397 |
Q |
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| T |
14162725 |
tatcacctgataaaaagtactcttgaatgatggattgagttttcatcttgaaacttttagcaacattttcttg |
14162653 |
T |
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