View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1457_1D_low_71 (Length: 202)
Name: NF1457_1D_low_71
Description: NF1457_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457_1D_low_71 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 99; Significance: 4e-49; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 53565768 - 53565936
Alignment:
| Q |
32 |
tgtttcgtaagtaatttcactactagaaaaactgaattatggnnnnnnnttgaaatgtatacatacaatttaatttttatacactcacgatatataattt |
131 |
Q |
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| T |
53565768 |
tgtttcgtaagtaatttcactactagaaaaattgaattatagaaaaaaattgaaatgtatacatacaatttaatttttatacactcacgatatataattt |
53565867 |
T |
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| Q |
132 |
gtttattcttatatttaatccaaatatggnnnnnnnnntagaaatgtatacacatgtaaaaactttgtagg |
202 |
Q |
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|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
53565868 |
gtttattcttatatttaatccaaatatgaaaaaaaaa--aaaaatgtatacacatgtaaaaactttgtagg |
53565936 |
T |
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