View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1457_2D_low_8 (Length: 303)
Name: NF1457_2D_low_8
Description: NF1457_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1457_2D_low_8 |
 | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
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| [»] scaffold0038 (2 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 42)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 26656959 - 26657228
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26656959 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggttcggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
26657058 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagagacaatgttcctt |
212 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26657059 |
aactgtcacgggatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagagacaatgttcctt |
26657158 |
T |
|
| Q |
213 |
caggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26657159 |
caggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
26657228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 26762930 - 26763199
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26762930 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggttcggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
26763029 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagagacaatgttcctt |
212 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26763030 |
aactgtcacgggatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagagacaatgttcctt |
26763129 |
T |
|
| Q |
213 |
caggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26763130 |
caggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
26763199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 26885064 - 26885333
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||| ||| |
|
|
| T |
26885064 |
tgttgacaaaatggagcagctagaggctttggctggaggacttgattggtttggtcgtggaagcagggtcatcattaccactcgtgataaacacttacta |
26885163 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagagacaatgttcctt |
212 |
Q |
| |
|
| || || | |||| | |||||||| ||| ||||| ||||||||| |||||| ||||||||||||| ||| |||| |||| |||||| ||||||| |
|
|
| T |
26885164 |
acgtgccatagggtagatagaacatatgaagtagaagggatatatgggaaagaagcttttgaattgttgaggtggctggcctttaaagacaaagttcctt |
26885263 |
T |
|
| Q |
213 |
caggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
26885264 |
taggttatgaagagattttaaaccgtgcagtttcatatgcttcgggccttcctttagttatagaaatagt |
26885333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 21 - 282
Target Start/End: Original strand, 26647481 - 26647745
Alignment:
| Q |
21 |
aactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtca |
120 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||| |||| |||||| |
|
|
| T |
26647481 |
aactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtca |
26647580 |
T |
|
| Q |
121 |
cggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggc-ttttaga--gacaatgttccttcaggt |
217 |
Q |
| |
|
|| ||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| ||| ||| |||| || || || || |
|
|
| T |
26647581 |
tgggatagaaagaacatatgcagtaagagggctatatgggacagaagctcttgaattgttgaggtggatggcgtttaagaataacaaagtaccgccaagt |
26647680 |
T |
|
| Q |
218 |
tatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||| |||| |
|
|
| T |
26647681 |
tatgaagacgttttaaaccgtgcagtttcatatgcttcaggccttcccttagttttagaaatagt |
26647745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 21 - 282
Target Start/End: Original strand, 26753449 - 26753713
Alignment:
| Q |
21 |
aactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtca |
120 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||| |||| |||||| |
|
|
| T |
26753449 |
aactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttactaacctgtca |
26753548 |
T |
|
| Q |
121 |
cggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggc-ttttaga--gacaatgttccttcaggt |
217 |
Q |
| |
|
|| ||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| ||| ||| |||| || || || || |
|
|
| T |
26753549 |
tgggatagaaagaacatatgcagtaagagggctatatgggacagaagctcttgaattgttgaggtggatggcgtttaagaataacaaagtaccgccaagt |
26753648 |
T |
|
| Q |
218 |
tatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||| |||| |
|
|
| T |
26753649 |
tatgaagacgttttaaaccgtgcagtttcatatgcttcaggccttcccttagttttagaaatagt |
26753713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27697774 - 27697502
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| |
|
|
| T |
27697774 |
tgttgacaaactggatcagctacaggctttggctggaggactcgattggtttggtcctggaagcagagtcatcatcaccacccgagataaacacttacta |
27697675 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt---agagacaatgttc |
209 |
Q |
| |
|
|| ||| || ||||||| ||| ||||| ||||||||| | ||||||||||||| |||||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
27697674 |
gaccatcatgggatagaaaaaacgtatgcagtaaaagggttgaatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttc |
27697575 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
| ||| | || |||| |||||||| |||||||||||||||| ||| || ||||| |||||||||||| |||| |
|
|
| T |
27697574 |
catcaaggtacaaagagattttaagtcgtgcagtttcatatgtttctggccttccgttagttatagaaatagt |
27697502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27592209 - 27591937
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||| ||| |
|
|
| T |
27592209 |
tgttgacaaactggatcagctagatgctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttacta |
27592110 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
||||||| || ||||||| ||||||||| ||| ||| | | ||||||||||||| |||||||||||||| |||| |||||||| | || || |||| |
|
|
| T |
27592109 |
gactgtcatgggatagaaaaaacatatgcagtagaagagttgaatgggacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttc |
27592010 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
||||| |||||||||| ||||||| ||||||||| ||||||||| || ||||| |||| ||||||||||| |
|
|
| T |
27592009 |
cttcaagttatgaagacattttaaagcgtgcagttgtatatgcttctggccttccattagcgatagaagtagt |
27591937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27337283 - 27337011
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||| ||| |
|
|
| T |
27337283 |
tgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttacta |
27337184 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttc |
209 |
Q |
| |
|
| |||||| || ||||||| ||||||||| |||| |||||||||||||| ||||| |||||||||||||| |||| ||||||| ||| |||| || | |
|
|
| T |
27337183 |
acctgtcatgggatagaaagaacatatgcagtaagagggctatatgggaaggaagctcttgaattgttgaggtggacggcttttaagaataacaaagtac |
27337084 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
| || |||||||||| |||||| ||||||||||||||||| ||| || ||||||||||| ||||| |||| |
|
|
| T |
27337083 |
cgccaagttatgaagatgttttaaaccgtgcagtttcatatggttcgggcattcccttagttttagaaatagt |
27337011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27398023 - 27397751
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||| ||| |
|
|
| T |
27398023 |
tgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcatcaccacccgagataaacacttacta |
27397924 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttc |
209 |
Q |
| |
|
| |||||| || ||||||| ||||||||| |||| |||||||||||||| ||||| |||||||||||||| |||| ||||||| ||| |||| || | |
|
|
| T |
27397923 |
acctgtcatgggatagaaagaacatatgcagtaagagggctatatgggaaggaagctcttgaattgttgaggtggacggcttttaagaataacaaagtac |
27397824 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
| || |||||||||| |||||| ||||||||||||||||| ||| || ||||||||||| ||||| |||| |
|
|
| T |
27397823 |
cgccaagttatgaagatgttttaaaccgtgcagtttcatatggttcgggcattcccttagttttagaaatagt |
27397751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27676808 - 27676536
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||| |
|
|
| T |
27676808 |
tgttgacaaactggatcagctagaggctttggctggaagactcgattggtttggtcctggaagcagagtcatcatcaccacccgagataaacacttacta |
27676709 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
||||||| || ||||||| ||||||||| ||| ||| | | ||| ||||||||| |||||||||||||| |||| |||||||| | || || |||| |
|
|
| T |
27676708 |
gactgtcatgggatagaaaaaacatatgcagtagaagagttgaatgagacagaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttc |
27676609 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
||||| |||||||||| ||||||| ||||||||| ||||||||| || ||||| |||| ||||||||||| |
|
|
| T |
27676608 |
cttcaagttatgaagacattttaaagcgtgcagttgtatatgcttctggccttccattagcgatagaagtagt |
27676536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27717687 - 27717415
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||| || |||| ||| | |||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||| |||| |||||||| ||| |
|
|
| T |
27717687 |
tgttgacaatatgaagcaactacatgctttggctggaggacctgattggttcggccgtggaagcaaagtcatcattaccactcgagacaaacacttacta |
27717588 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
| |||||| || ||| ||| | ||| ||| ||||| | |||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
27717587 |
acctgtcatgggataaaaagtatgcatgaagtagaagggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttc |
27717488 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||| ||||| ||||||| |||||||||| |||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
27717487 |
cttcaggttacgaagagattttaaaccgtgcagttgcatatgcttctggccttccgttagttatagaaatagt |
27717415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 26862574 - 26862758
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||| ||||||||||| || || ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
26862574 |
tgttgacaaactggaacagctagaggcattagctggaggacttgattggtttggtcatggaagtagagtcatcattaccactcgagataaacacttacta |
26862673 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttta |
197 |
Q |
| |
|
| || || || ||||||| ||||||||| ||||| |||||| ||| ||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
26862674 |
acatgccatgggatagaaagaacatatgcggtaaacgggctacatgagacagaagcttttgaattgttgaggtggatggctttta |
26862758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 276
Target Start/End: Original strand, 26803451 - 26803706
Alignment:
| Q |
24 |
tggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacgg |
123 |
Q |
| |
|
||||||| ||| | |||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| |||| ||||| || || | | |||| | |
|
|
| T |
26803451 |
tggagcaactacatgctttggctggaggacctgattggtttggccatggaagcagggtcatcattaccactcgagacaaacatttactgaccagtcatga |
26803550 |
T |
|
| Q |
124 |
aatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttat |
220 |
Q |
| |
|
||||||| ||||||||| ||| | ||| | |||||||||||||| |||||||||||||| ||||||||||||| | |||| || |||||| ||||| |
|
|
| T |
26803551 |
tatagaaagaacatatgcagtagaggggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaaataacaaagtaccttcaagttat |
26803650 |
T |
|
| Q |
221 |
gaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttataga |
276 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
26803651 |
gaagacattttaaatcgtgcagtttcatatgcttcaggtcttcccttagttttaga |
26803706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 27679969 - 27680216
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| || | ||| |||| |||| | |||| || ||||||| ||| |
|
|
| T |
27679969 |
gctttggctggaggacttgattggttcggatgtggaagcagagtcatcattaccactcgaaacaaagacttactaagcagtcatggcatagaaagtacac |
27680068 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt---agagacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||| ||||| | ||| ||||||||| |||||||||||||| |||||||||||| || || || |||||||||||||| ||||| ||||||| |
|
|
| T |
27680069 |
atgcagtagaagggttgaatgagacagaagctcttgaattgttgaggtggatggcttttaaaagtgataaagttccttcaggttacgaagacattttaaa |
27680168 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||| ||||||||| || ||||| |||||| |||||||||| |
|
|
| T |
27680169 |
ccgtgcagttgcatatgcttttggccttccgttagttttagaagtagt |
27680216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 31285578 - 31285825
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||| |||| |||| || ||| ||| ||| |
|
|
| T |
31285578 |
gctttggctggaggacttgattggttcggccgtggaagcagagtcatcattaccactcgagacaaacacttactaagtagtcatgggataaaaagtacac |
31285677 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt---agagacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||| ||||| | ||||||| ||||| ||||||||||| || |||||||||||| || ||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
31285678 |
atgcagtagaagggttgaatgggactgaagctcttgaattgttaaggtggatggcttttaaaagtgacaaagttccttcaggttacgaagacattttaaa |
31285777 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||| ||||| |||| || ||||| ||||||||||||||||| |
|
|
| T |
31285778 |
ccgtgcagttgcatattcttctggccttccattagttatagaagtagt |
31285825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 27610308 - 27610036
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||| || |||| ||| | |||||||| ||||||| ||||||||| || ||||||||| |||||||||| ||||| |||| |||||||||||| |
|
|
| T |
27610308 |
tgttgacaatatgaagcaactacatgctttggctggaggacctgattggttcggccgtggaagcaaagtcatcattgccactcgagacaaacacttgcta |
27610209 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
| |||||| || ||| ||| | || || ||||||| |||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
27610208 |
acctgtcatgggataaaaagtatgcataaagtggaagggctgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttc |
27610109 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||| ||||| ||||||| |||||| ||| |||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
27610108 |
cttcaggttacgaagagattttaaaccgtgctgttgcatatgcttctggccttccgttagttatagaaatagt |
27610036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 282
Target Start/End: Complemental strand, 27603869 - 27603620
Alignment:
| Q |
36 |
aggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataac |
135 |
Q |
| |
|
||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||| |||| | |||||| |||| | |||| | ||||||| || |
|
|
| T |
27603869 |
aggctttggcaggagaacctgattggtttgggcttggaagcagggtcatcattaccactcgagacagacacttactaaccagtcatgatatagaaagaaa |
27603770 |
T |
|
| Q |
136 |
atatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttatgaagaaatttta |
232 |
Q |
| |
|
||||| || ||||| | | | |||||||||| |||||||||||||| |||||||||||| ||| |||| || ||||||| ||||||||| ||||| |
|
|
| T |
27603769 |
gtatgcattagaagggttgtgtaggacagaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcagtttatgaagacgtttta |
27603670 |
T |
|
| Q |
233 |
agccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
27603669 |
aaccgtgcagtttcatatgcttcaggacttcccttagttttggaagtagt |
27603620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 27530489 - 27530233
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| ||| || |||||||||||||| ||| || | |||||||| ||| |
|
|
| T |
27530489 |
tgttgacaaactggatcagctagaggccttggctggaggacttgattggttcggtcctgggagtagagtcatcattactactcgaaacaaacacttacta |
27530390 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagagacaatgttcctt |
212 |
Q |
| |
|
|| ||| || ||||||| ||| |||| ||| ||||| | ||| ||||||||| || ||||||||||| ||||||||||| | ||| |||||||||| |
|
|
| T |
27530389 |
aagattcatgggatagaaagtacacatgcagtagaagggttgaatgcgacagaagctctcgaattgttgaggtggatggctttcaaagaaaatgttcctt |
27530290 |
T |
|
| Q |
213 |
caggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
269 |
Q |
| |
|
|| || ||||||| ||||||| ||||||| || | |||||||| || ||||| |||| |
|
|
| T |
27530289 |
caagtcatgaagacattttaaaccgtgcacttacttatgcttctggccttccattag |
27530233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 28787257 - 28787504
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||||| ||||||||||| ||| |||| |||||||| |||| |||| || ||||||| ||| |
|
|
| T |
28787257 |
gctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattacgactcgagacaaacacttactaagaagtcatgggatagaaagtacac |
28787356 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| || |||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |||| || |||||| |||||||||| |||||| |
|
|
| T |
28787357 |
atgaagtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaa |
28787456 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||| ||||| |||| |
|
|
| T |
28787457 |
tcgtgcagtttcttatgcttcgggccttcccttagttttagaaatagt |
28787504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 28793378 - 28793625
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||||| ||||||||||| ||| |||| |||||||| |||| |||| || ||||||| ||| |
|
|
| T |
28793378 |
gctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattacgactcgagacaaacacttactaagaagtcatgggatagaaagtacac |
28793477 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| || |||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |||| || |||||| |||||||||| |||||| |
|
|
| T |
28793478 |
atgaagtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaa |
28793577 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||| ||||| |||| |
|
|
| T |
28793578 |
tcgtgcagtttcgtatgcttcgggccttcccttagttttagaaatagt |
28793625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 25484053 - 25484312
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||| ||| |
|
|
| T |
25484053 |
tgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagagtcatcattaccactcgtgataaacacttacta |
25484152 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
|||||| || || || ||| |||| ||| ||| | ||| ||||||||| |||||||||||||| | |||||||||| | ||||| |||| |
|
|
| T |
25484153 |
gcctgtcatgggattacaagtacacatgcagtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttc |
25484252 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
269 |
Q |
| |
|
||||| |||||||||| ||||||| ||||| |||| | ||||| || || || ||||||| |
|
|
| T |
25484253 |
cttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcctgcccttag |
25484312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 26143862 - 26144121
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||| | ||||||||||| ||| |
|
|
| T |
26143862 |
tgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagggtcatcattaccactcgtgataaacacttacta |
26143961 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
|||||| || || || ||| |||| ||| ||| | ||| ||||||||| |||||||||||||| | |||||||||| | ||||| |||| |
|
|
| T |
26143962 |
gcctgtcatgggattacaagtacacatgcagtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttc |
26144061 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
269 |
Q |
| |
|
||||| |||||||||||||||||| ||||| |||| | ||||| || || || ||||||| |
|
|
| T |
26144062 |
cttcaagttatgaagaaattttaaaccgtgtagttacttatgcatctggcctgcccttag |
26144121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 280
Target Start/End: Complemental strand, 27705401 - 27705172
Alignment:
| Q |
54 |
ttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacatatgccgtaaaagggct |
153 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| |||||| || |||||||||| ||| || ||| | ||||||| ||||||| | ||| ||||| | |
|
|
| T |
27705401 |
ttgattggtttggccctggaagcagagttatcatcaccactcgaaataaacacttactagcctctcataggatagaaaaaacatatccagtagaagggtt |
27705302 |
T |
|
| Q |
154 |
atatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaagccgtgcagtttcatat |
250 |
Q |
| |
|
|||||| ||| || |||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
27705301 |
gaatgggatagatgctcttgaattgttgaggtggatggcttttaaaaatgacaacgttccttcaggttatgaagacattttaaaccgtgcagttgcatat |
27705202 |
T |
|
| Q |
251 |
gcttcaggacttcccttagttatagaagta |
280 |
Q |
| |
|
||||| || ||||| |||||| |||||||| |
|
|
| T |
27705201 |
gcttctggccttccgttagttttagaagta |
27705172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 282
Target Start/End: Complemental strand, 27426775 - 27426528
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| |||||| |||||||||| ||| ||||||| |||||||||| ||||| ||||||||||||| ||| |||||| | ||||||| ||||| |
|
|
| T |
27426775 |
gctttggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaaaaacat |
27426676 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||||||||| | ||| ||||||||| |||||||||||||| ||||||||||||| | ||||| ||||||||| |||||||| | ||||| | |
|
|
| T |
27426675 |
atgcagtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaa |
27426576 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||| |||| | |||||||| || ||||| ||||||||||| |||| |
|
|
| T |
27426575 |
tcgtgtagttgcttatgcttctggccttccggtagttatagaaatagt |
27426528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 26824815 - 26825073
Alignment:
| Q |
15 |
ttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaa |
114 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| |||||| |||||||||| ||| ||| ||||||||||||||||| ||| |||| ||||| || || | |
|
|
| T |
26824815 |
ttgacaaactggagcaactagatgctttggctggaggatttgattggttcggtaatggcagcagagtcatcattacaactcgagacaaacaattacttac |
26824914 |
T |
|
| Q |
115 |
ctgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttcct |
211 |
Q |
| |
|
| ||| | |||||| ||| |||| ||| ||||| | |||||||||||||| ||||||||||| || ||||||||||||| | |||| || || |
|
|
| T |
26824915 |
caatcatgagatagaattaatgtatgaagtagaagggttgtatgggacagaagctcttgaattgttaaggtggatggcttttaaaaataacaaagtaccg |
26825014 |
T |
|
| Q |
212 |
tcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagt |
270 |
Q |
| |
|
||| |||||||| | ||||||| ||||||||||||||||||||| || ||||||||||| |
|
|
| T |
26825015 |
tcaagttatgaacacattttaaaccgtgcagtttcatatgcttcgggccttcccttagt |
26825073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 25511886 - 25512150
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||| | ||||||||||| ||| |
|
|
| T |
25511886 |
tgttgacaaactggagcagctagaggctttggctggaggacttgactggttcggtcctggaagcagagtcatcattaccactcgtgataaacacttacta |
25511985 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
|||||| ||| || || | ||| |||| ||| ||||| | ||| || |||||| ||| |||||||| | |||||||||| | ||||| |||| |
|
|
| T |
25511986 |
gcctgtcatggattacaagt-acacatgcagtagaagggttgaatgagatagaagctcttattttgttgaggcgaatggcttttaaacatgacaaagttc |
25512084 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatag |
275 |
Q |
| |
|
||||| |||||||||| ||||||| ||||| |||| | ||||| || || ||||| |||| ||||| |
|
|
| T |
25512085 |
cttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggccttccgttagctatag |
25512150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 25580716 - 25580975
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||| | ||||||||||| ||| |
|
|
| T |
25580716 |
tgttgacaaactggagcagctagaggctttggctggaggacttgattggttcggtcatggaagcagtgtcatcattaccactcgtgataaacacttacta |
25580815 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
|||||| || || || ||| |||| ||| ||| | ||| ||||||||| |||||||||||||| | |||||||||| | ||||| |||| |
|
|
| T |
25580816 |
gcctgtcatgggattacaagtacacatgcagtagaagaattgaatgagacagaagctcttgaattgttgaggcgaatggcttttaaaaatgacaaagttc |
25580915 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
269 |
Q |
| |
|
||||| ||||||||| ||||||| ||||| |||| | ||||| || || || ||||||| |
|
|
| T |
25580916 |
cttcaatttatgaagagattttaaaccgtgtagttacttatgcatctgggctgcccttag |
25580975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 277
Target Start/End: Original strand, 26624290 - 26624532
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||| ||||||||||| || |||||||||| ||||| ||||||||| || | |||||| | |||| | ||| || ||| ||| ||| |
|
|
| T |
26624290 |
gctttggctggagggcttgattggttcggacgtggaagcagggtcataattaccactcgaaacaaacacctactaagcactcatgggataaaaagcacac |
26624389 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||| ||||| | ||||||||||| | | |||||||||||| ||||||||||||| | ||||| |||||||||||||||||||| ||||||| |
|
|
| T |
26624390 |
atgcagtagaagggttgtatgggacagacggtcatgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaa |
26624489 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaa |
277 |
Q |
| |
|
|||||||||| |||||||||| || ||||| |||||| ||||| |
|
|
| T |
26624490 |
ccgtgcagttgcatatgcttctggccttccgttagttttagaa |
26624532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 277
Target Start/End: Original strand, 26730267 - 26730509
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||| ||||||||||| || |||||||||| ||||| ||||||||| || | |||||| | |||| | ||| || ||| ||| ||| |
|
|
| T |
26730267 |
gctttggctggagggcttgattggttcggacgtggaagcagggtcataattaccactcgaaacaaacacctactaagcactcatgggataaaaagcacac |
26730366 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||| ||||| | ||||||||||| | | |||||||||||| ||||||||||||| | ||||| |||||||||||||||||||| ||||||| |
|
|
| T |
26730367 |
atgcagtagaagggttgtatgggacagacggtcatgaattgttgaggtggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaa |
26730466 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaa |
277 |
Q |
| |
|
|||||||||| |||||||||| || ||||| |||||| ||||| |
|
|
| T |
26730467 |
ccgtgcagttgcatatgcttctggccttccgttagttttagaa |
26730509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 26056916 - 26057181
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||| ||| ||| |
|
|
| T |
26056916 |
tgttgacaaactggagcagctagacgctttggctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcgtgataaacgcttacta |
26057015 |
T |
|
| Q |
113 |
aactgtcacg-gaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgtt |
208 |
Q |
| |
|
|| ||| | ||||| || | ||| |||| ||| ||||| | ||| ||||||||| |||||||| ||||| | | ||||||| | ||||| ||| |
|
|
| T |
26057016 |
gcctatcatgtgaatacaagt-acacatgcagtagaagggttgaatgagacagaagctcttgaattattgagccgaaatgcttttaaaaatgacaaagtt |
26057114 |
T |
|
| Q |
209 |
ccttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatag |
275 |
Q |
| |
|
|||||| |||||||||| ||||||| ||||| |||| | ||||| || || ||||| |||| ||||| |
|
|
| T |
26057115 |
ccttcaagttatgaagatattttaaaccgtgtagttacttatgcatctggccttccgttagctatag |
26057181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 26076886 - 26077151
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||| ||| ||| |
|
|
| T |
26076886 |
tgttgacaaactggagcagctagacgctttggctggaggacttgattggttcggtcttggaagcagagtcatcattaccactcgtgataaacgcttacta |
26076985 |
T |
|
| Q |
113 |
aactgtcacg-gaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgtt |
208 |
Q |
| |
|
|| ||| | ||||| || | ||| |||| ||| ||||| | ||| ||||||||| |||||||| ||||| | | ||||||| | ||||| ||| |
|
|
| T |
26076986 |
gcctatcatgtgaatacaagt-acacatgcagtagaagggttgaatgagacagaagctcttgaattattgagccgaaatgcttttaaaaatgacaaagtt |
26077084 |
T |
|
| Q |
209 |
ccttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatag |
275 |
Q |
| |
|
|||||| |||||||||| ||||||| ||||| |||| | ||||| || || ||||| |||| ||||| |
|
|
| T |
26077085 |
ccttcaagttatgaagatattttaaaccgtgtagttacttatgcatctggccttccgttagctatag |
26077151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 25539537 - 25539796
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | |||| ||| || || |
|
|
| T |
25539537 |
tgttgacaaactagagcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatcattaccactcgtgatacacatttatta |
25539636 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
|||||| || || || ||| ||| ||||||||| | ||| ||||||||| |||||||||||||| | ||||| |||| | ||||| |||| |
|
|
| T |
25539637 |
gcctgtcatgggattacaagtacacatgtagtaaaagggttgaatgagacagaagctcttgaattgttgaggcgaatggcgtttaaaaatgacaaagttc |
25539736 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttag |
269 |
Q |
| |
|
|||| |||||||||| ||||||| ||||| |||| | ||||| || || || ||||||| |
|
|
| T |
25539737 |
cttcgagttatgaagagattttaaaccgtgtagttacttatgcatctggcctacccttag |
25539796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 27215446 - 27215523
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattac |
90 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
27215446 |
tgttgacaaactagagcagctagaggctttggctggaggacttgattggtttggtggtggaagtagagtcatcattac |
27215523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 25492507 - 25492389
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||| | ||||||||||||||| ||| |||||||| |||| |||||||||||| |||| |||||| | ||| |
|
|
| T |
25492507 |
tgttgacagactggagcagctagaggatttggctgaaggacttgattggttcggtcgtggaagcggagttatcattaccactcgagacaaacacatacta |
25492408 |
T |
|
| Q |
113 |
aactgtcacggaatagaaa |
131 |
Q |
| |
|
| | |||| || ||||||| |
|
|
| T |
25492407 |
accagtcatgggatagaaa |
25492389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 28782106 - 28782195
Alignment:
| Q |
24 |
tggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaa |
113 |
Q |
| |
|
||||||| ||| | |||||||||||||||| ||||||||| || |||||||||| ||||||||||||||| |||| |||||||| |||| |
|
|
| T |
28782106 |
tggagcaactacatgctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaa |
28782195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 28227973 - 28228045
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||| | ||| |||||||||||| || | ||||| |||||| |
|
|
| T |
28227973 |
tttggctggaggacttgattggtttggtcctggaagtaaagtgatcattaccactcgaaacaaacaattgcta |
28228045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 28326499 - 28326599
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacatat |
139 |
Q |
| |
|
|||||| ||||||||||||||||| ||| ||| || ||||| ||| |||||||| |||| ||||| |||||||| ||||||| || |||| | ||||| |
|
|
| T |
28326499 |
tttggctggaggacttgattggttcggtcctggcagtagagtgatcgttaccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatat |
28326598 |
T |
|
| Q |
140 |
g |
140 |
Q |
| |
|
| |
|
|
| T |
28326599 |
g |
28326599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 28504135 - 28504235
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacatat |
139 |
Q |
| |
|
|||||| ||||||||||||||||| ||| ||| || ||||| ||| |||||||| |||| ||||| |||||||| ||||||| || |||| | ||||| |
|
|
| T |
28504135 |
tttggctggaggacttgattggttcggtcctggcagtagagtgatcgttaccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatat |
28504234 |
T |
|
| Q |
140 |
g |
140 |
Q |
| |
|
| |
|
|
| T |
28504235 |
g |
28504235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 29477231 - 29477176
Alignment:
| Q |
35 |
gaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattac |
90 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||| |
|
|
| T |
29477231 |
gaggctttggctggaggacttgattggtttggtcctggtagcagagttgtcattac |
29477176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 29827009 - 29827080
Alignment:
| Q |
42 |
tggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaa |
113 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| |||| ||| |||||||||||| |||| |||| ||||||| |
|
|
| T |
29827009 |
tggcgggaggacttgattggtttggtcctggcagcatagtgatcattaccactcgagaccaacatttgctaa |
29827080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 31289320 - 31289362
Alignment:
| Q |
70 |
tggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
31289320 |
tggaagcagagtcatcattaccacttgagacaaacaattgcta |
31289362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 28235586 - 28235658
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||| |||| | |||||||||||||| |||||| | ||| |||||||||||| |||| ||||| |||||| |
|
|
| T |
28235586 |
tttggcgggagaaattgattggtttggtcctggaagtaaagtgatcattaccactcgagacaaacaattgcta |
28235658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 282
Target Start/End: Complemental strand, 28126859 - 28126591
Alignment:
| Q |
17 |
gacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaact |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||| |||| |||||||| |||| || |
|
|
| T |
28126859 |
gacaaactggagcagctagaggctttggctggaggacttgattggttcggtcgtggaagcaaagtcatcattaccactcgagagaaacacttactaacct |
28126760 |
T |
|
| Q |
117 |
gtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttc |
213 |
Q |
| |
|
|||| || ||||||| || |||| ||||||||| | |||| ||| ||||||||||||||||||| ||||||||||||| | |||| |||||||| |
|
|
| T |
28126759 |
gtcatgggatagaaagtacgcatgcggtaaaagggttgtatgtaacaaaagcacttgaattgttgaggtggatggcttttaaacataacaaagttccttc |
28126660 |
T |
|
| Q |
214 |
aggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
| ||||||| || |||||| ||| |||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
28126659 |
aagttatgatgatgttttaaaccgggcagtttcatatgcttcaggccttcccttagttatagaaatagt |
28126591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 17 - 276
Target Start/End: Complemental strand, 28163560 - 28163298
Alignment:
| Q |
17 |
gacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaact |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| |||||||| ||| |||||||||| ||||||||||||||| |||| |||||||| |||| || |
|
|
| T |
28163560 |
gacaaactggagcagctggaggctttggctggaggactcgattggttcggtcgtggaagcagggtcatcattaccactcgagacaaacacttactaacct |
28163461 |
T |
|
| Q |
117 |
gtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttc |
213 |
Q |
| |
|
|||| || ||||||| | || | ||| ||||| | |||||||| ||||| ||||||||||||| ||||||||||||| | |||| |||||||| |
|
|
| T |
28163460 |
gtcatgggatagaaagtatgcattcggtagaagggttgtatgggacggaagcgcttgaattgttgacgtggatggcttttaaaaataacaaagttccttc |
28163361 |
T |
|
| Q |
214 |
aggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttataga |
276 |
Q |
| |
|
| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28163360 |
aagttatgaagatgttttaaatcgtgcagtttcatatgcttcaggccttcccttagttataga |
28163298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 267503 - 267344
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||||||||||||| || | ||||||||||||| || |||||||| |||| || || || |||| |||||| || ||||||| || |
|
|
| T |
267503 |
gctttggctggaggacttgattggttcggctatggaagcagagtcgtcgttaccactcgagacaagcaattactaacctgtcatgggatagaaagtacgc |
267404 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttta |
197 |
Q |
| |
|
||| ||| ||||| | |||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
267403 |
atgaagtagaagggttgtatgggaccgaagctcttgaattgttgagttggatggctttta |
267344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 2727 - 2455
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
||||||||| || |||| ||| | |||||||| ||||||| ||||||||| || ||||||||| |||||||||||||||| |||| |||||||| ||| |
|
|
| T |
2727 |
tgttgacaatatgaagcaactacatgctttggctggaggacctgattggttcggccgtggaagcaaagtcatcattaccactcgagacaaacacttacta |
2628 |
T |
|
| Q |
113 |
aactgtcacggaatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttc |
209 |
Q |
| |
|
| |||||| || ||| ||| | ||| ||| ||||| | |||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
2627 |
acctgtcatgggataaaaagtatgcatgaagtagaagggttgtatgggacagaagctcttgaattgttgaggtggatggcttttaaaagtgacaatgttc |
2528 |
T |
|
| Q |
210 |
cttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||| ||||| ||||||| |||||||||| |||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
2527 |
cttcaggttacgaagagattttaaaccgtgcagttgcatatgcttctggccttccgttagttatagaaatagt |
2455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 282
Target Start/End: Complemental strand, 3889 - 3628
Alignment:
| Q |
24 |
tggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacgg |
123 |
Q |
| |
|
||||||| ||| ||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||| |||| || |
|
|
| T |
3889 |
tggagcaactacaggctttggcaggagaacctgattggtttggccttggaagcagggtcatcattaccactcgagacaaacacttgctaagaagtcatgg |
3790 |
T |
|
| Q |
124 |
aatagaaataacatatgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttat |
220 |
Q |
| |
|
||||||| || ||| || |||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |||| || |||||| ||||| |
|
|
| T |
3789 |
gatagaaagtacgcatgaagtgaaagggctgtatgggacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttat |
3690 |
T |
|
| Q |
221 |
gaagaaattttaagccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| || |||||||||||| ||||| |||| |
|
|
| T |
3689 |
gaagacgttttaaatcgtgcagtttcatatgcttcgggccttcccttagttttagaaatagt |
3628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 282
Target Start/End: Complemental strand, 12838 - 12591
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||||| ||||||||||||||| |||| |||||||| |||| |||| || ||| ||| || |
|
|
| T |
12838 |
gctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggataaaaagtacgc |
12739 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| || |||||||| ||||| |||||||| ||||| ||||||||||||||||||||| ||| |||| || |||||| |||||||||| |||||| |
|
|
| T |
12738 |
atgaagtgaaagggctgtatggaacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaa |
12639 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||| |||| |
|
|
| T |
12638 |
tcgtgcagtttcatatgcttcgggccttcccttagttttagaaatagt |
12591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 8506 - 8753
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||||| ||||||||||||||| |||| |||||||| |||| |||| || ||| ||| || |
|
|
| T |
8506 |
gctttggcaggaggacctgattggttcggccgtggaagcagggtcatcattaccactcgagacaaacacttactaagaagtcatgggataaaaagtacgc |
8605 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| || |||||||| ||||| |||||||| ||||| ||||||||||||||||||||| ||| |||| || |||||| |||||||||| |||||| |
|
|
| T |
8606 |
atgaagtgaaagggctgtatggaacagaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaa |
8705 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||| |||| |
|
|
| T |
8706 |
tcgtgcagtttcatatgcttcgggccttcccttagttttagaaatagt |
8753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 60588 - 60835
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| |||||| |||||||||| ||| ||||||| |||||||||| ||||| ||||||||||||| ||| |||||| | ||||||| ||||| |
|
|
| T |
60588 |
gctttggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaaaaacat |
60687 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||||||||| | ||| ||||||||| |||||||||||||| ||||||||||||| | ||||| ||||||||| |||||||| | ||||| | |
|
|
| T |
60688 |
atgcagtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaa |
60787 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||| |||| | |||||||| || ||||| ||||||||||| |||| |
|
|
| T |
60788 |
tcgtgtagttgcttatgcttctggccttccggtagttatagaaatagt |
60835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 18074780 - 18075027
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| |||||| |||||||||| ||| ||||||| |||||||||| ||||| ||||||||||||| ||| |||||| | ||||||| ||||| |
|
|
| T |
18074780 |
gctttggctggaggagttgattggttcggtcctggaagccgagtcatcatcaccacccgagataaacacttactagcctgtcatgagatagaaaaaacat |
18074879 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
|||| ||||||||| | ||| ||||||||| |||||||||||||| ||||||||||||| | ||||| ||||||||| |||||||| | ||||| | |
|
|
| T |
18074880 |
atgcagtaaaagggttgaatgtgacagaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaa |
18074979 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||| |||| | |||||||| || ||||| ||||||||||| |||| |
|
|
| T |
18074980 |
tcgtgtagttgcttatgcttctggccttccggtagttatagaaatagt |
18075027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 279
Target Start/End: Complemental strand, 18654636 - 18654392
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||| ||||||||| ||||||||||||||||| |||||||||||| | | |||||||| |||| | ||| | |||||||| | |
|
|
| T |
18654636 |
gctttggctggaggacgtgattggttcggttgtggaagcagagttatcattaccactcgtaacaaacacttactaagcaatcatgagatagaaattatgc |
18654537 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| ||||||||| | | | | | | || |||||||||||||| ||||||||||||| | |||| ||||||||| |||||||||| ||||||| |
|
|
| T |
18654536 |
atgaagtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaatttacaaagttccttcaagttatgaagagattttaaa |
18654437 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagt |
279 |
Q |
| |
|
|||||||||| | |||||||| || ||||| |||| ||||||||| |
|
|
| T |
18654436 |
ccgtgcagttgcgtatgcttctggccttccattagctatagaagt |
18654392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 38 - 282
Target Start/End: Complemental strand, 18678719 - 18678472
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||| ||||||||| ||||||||||||||||| |||||||||||| | | |||||||| |||| | ||| | |||||||| | |
|
|
| T |
18678719 |
gctttggccggaggacgtgattggttcggttgtggaagcagagttatcattaccactcgtaacaaacacttactaagcaatcatgagatagaaattatgc |
18678620 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttagag---acaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| ||||||||| | | | || | | || |||||||||||||| ||||||||||||| | |||| ||||||||| |||||||||| ||||||| |
|
|
| T |
18678619 |
atgaagtaaaagggatgtctagggaaaatgctcttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaa |
18678520 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
||||||||| |||||||| || ||||| |||| |||||||||||| |
|
|
| T |
18678519 |
acgtgcagttgtgtatgcttctggccttccattagctatagaagtagt |
18678472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 5090136 - 5090013
Alignment:
| Q |
15 |
ttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaa |
114 |
Q |
| |
|
||||||||||| | || ||| ||| |||||| |||| || ||||||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
5090136 |
ttgacaaactgaaacaactacaggttttggccggagaacctgattggtttggtcttggcagcagagtcatcattaccactcgagacaaacacttgctaaa |
5090037 |
T |
|
| Q |
115 |
ctgtcacggaatagaaataacata |
138 |
Q |
| |
|
||||| || || || |||||||| |
|
|
| T |
5090036 |
atgtcatgggattgatataacata |
5090013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 18723112 - 18722997
Alignment:
| Q |
170 |
cttgaattgttgagatggatggcttttagag---acaatgttccttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttccct |
266 |
Q |
| |
|
|||||||||||||| ||||||||||||| | |||| ||||||||| |||||||||| ||||||| ||| |||||| | |||||||| || ||||| | |
|
|
| T |
18723112 |
cttgaattgttgaggtggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaccgagcagttgcgtatgcttctggccttccat |
18723013 |
T |
|
| Q |
267 |
tagttatagaagtagt |
282 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
18723012 |
tagctatagaagtagt |
18722997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 18688653 - 18688538
Alignment:
| Q |
170 |
cttgaattgttgagatggatggcttttagag---acaatgttccttcaggttatgaagaaattttaagccgtgcagtttcatatgcttcaggacttccct |
266 |
Q |
| |
|
|||||||||||||| ||||||||||||| | | || ||||||||| |||||||||| ||||||| ||||||||| |||||||| || ||||| | |
|
|
| T |
18688653 |
cttgaattgttgaggtggatggcttttaaaagttataaagttccttcaagttatgaagagattttaaaccgtgcagtcgtgtatgcttctggccttccat |
18688554 |
T |
|
| Q |
267 |
tagttatagaagtagt |
282 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
18688553 |
tagctatagaagtagt |
18688538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 282
Target Start/End: Complemental strand, 18698559 - 18698312
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||| ||||||||| || |||||||||||||| |||||||||||| | | |||||||| |||| | ||| | |||||||| | |
|
|
| T |
18698559 |
gctttggctggaggacgtgattggttcggctgtggaagcagagttatcattaccactcgtaacaaacacttactaaccaatcatgagatagaaattatcc |
18698460 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| ||||||||| | | | | | | || |||||||||||||| ||||||||||||| | |||| ||||||||| |||||||||| ||||| | |
|
|
| T |
18698459 |
atgaagtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaa |
18698360 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|| ||||||| |||||||| || ||||| |||| | |||||||||| |
|
|
| T |
18698359 |
ccatgcagttgtgtatgcttctggccttccattagctctagaagtagt |
18698312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 282
Target Start/End: Complemental strand, 18730663 - 18730416
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||| ||||||||| || |||||||||| ||| |||||||||||| | | |||||||| |||| | ||| | |||||||| | |
|
|
| T |
18730663 |
gctttggctggaggacgtgattggttcggctgtggaagcatagttatcattaccactcgtaacaaacacttactaaccaatcatgagatagaaattatcc |
18730564 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggcttttaga---gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| ||||||||| | | | | | | || |||||||||||||| ||||||||||||| | |||| ||||||||| |||||||||| ||||| | |
|
|
| T |
18730563 |
atgaagtaaaagggatgtctacggaaaatgctcttgaattgttgaggtggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaa |
18730464 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|| ||||||| |||||||| || ||||| |||| | |||||||||| |
|
|
| T |
18730463 |
ccatgcagttgtgtatgcttctggccttccattagctctagaagtagt |
18730416 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 18723244 - 18723188
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccact |
94 |
Q |
| |
|
|||||||| ||||||| ||||||||| || | |||||||||||| |||||||||||| |
|
|
| T |
18723244 |
gctttggctggaggacctgattggttcggctctggaagcagagttatcattaccact |
18723188 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 282
Target Start/End: Complemental strand, 29273001 - 29272754
Alignment:
| Q |
38 |
gctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaaactgtcacggaatagaaataacat |
137 |
Q |
| |
|
|||||||| ||||||| ||||||||| || ||||||||| |||||||||||| ||| |||| ||||||||||||| ||||| || ||| ||| | |
|
|
| T |
29273001 |
gctttggctggaggacatgattggttcggccgtggaagcaaagtcatcattactactcgagacaaacacttgctaacttgtcatgggataaaaagtatgc |
29272902 |
T |
|
| Q |
138 |
atgccgtaaaagggctatatgggacagaagcacttgaattgttgagatggatggctttt-aga--gacaatgttccttcaggttatgaagaaattttaag |
234 |
Q |
| |
|
||| ||| ||||||| ||||||||| |||| |||||||||||||| |||||||||||| ||| |||| || |||||| ||||||||| |||||| |
|
|
| T |
29272901 |
atgaagtagaagggctgtatgggacaaaagctcttgaattgttgaggtggatggcttttaagaataacaaagtaccttcaatttatgaagacgttttaaa |
29272802 |
T |
|
| Q |
235 |
ccgtgcagtttcatatgcttcaggacttcccttagttatagaagtagt |
282 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||| |||| |
|
|
| T |
29272801 |
tcgtgcagtttcatatgcttcgggccttcccttagttttagaaatagt |
29272754 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 35984293 - 35984370
Alignment:
| Q |
13 |
tgttgacaaactggagcagctagaggctttggcaggaggacttgattggtttggttgtggaagcagagtcatcattac |
90 |
Q |
| |
|
|||||||||| | || ||||||||||| |||| ||||| |||||||| |||||| ||| |||||||| |||||||| |
|
|
| T |
35984293 |
tgttgacaaaatagaacagctagaggccttggttggagggtttgattggcttggttctggcagcagagttatcattac |
35984370 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 16691904 - 16691961
Alignment:
| Q |
56 |
gattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgctaa |
113 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||| |||| |||||||| |||| |
|
|
| T |
16691904 |
gattggtttggtcctggaagtagagtcatcattaccactcgagacaaacacttactaa |
16691961 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 28471 - 28543
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||| | ||| |||||||||||| || | ||||| |||||| |
|
|
| T |
28471 |
tttggctggaggacttgattggtttggtcctggaagtaaagtgatcattaccactcgaaacaaacaattgcta |
28543 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 35748 - 35820
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||| |||| | |||||||||||||| |||||| | ||| |||||||||||| |||| ||||| |||||| |
|
|
| T |
35748 |
tttggcgggagaaattgattggtttggtcctggaagtaaagtgatcattaccactcgagacaaacaattgcta |
35820 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 57455 - 57383
Alignment:
| Q |
40 |
tttggcaggaggacttgattggtttggttgtggaagcagagtcatcattaccactagagataaacacttgcta |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||| || | ||| |||||||||||| |||| |||| |||||| |
|
|
| T |
57455 |
tttggctggaggacttgattggtttggtcctggtagtaaagtgatcattaccactcgagacgaacaattgcta |
57383 |
T |
|
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