View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14580_low_9 (Length: 223)
Name: NF14580_low_9
Description: NF14580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14580_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 9636248 - 9636093
Alignment:
| Q |
32 |
tttgaatttcaaaagcaagcacatatgcacaatggagacataataaaatggtaacaatgaaagataaaaatgttattaacaactgaaaatatttaaacaa |
131 |
Q |
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| T |
9636248 |
tttgaatttcaaaagcaagcacatatgcacaatggagacataataaaatggtaacaatgaaagataaaaatgttattaacaactgaaaatatttaaacaa |
9636149 |
T |
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| Q |
132 |
aaacctcgagtaaaaatagctcgatgtgaaatagtacatataatggttctgataca |
187 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
9636148 |
aaacctcgagtaaaaatagctcgatgtgaaacagtacatataatggttctgataca |
9636093 |
T |
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