View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14581_low_2 (Length: 486)

Name: NF14581_low_2
Description: NF14581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14581_low_2
NF14581_low_2
[»] chr2 (41 HSPs)
chr2 (22-303)||(11938190-11938473)
chr2 (135-332)||(11938081-11938278)
chr2 (393-486)||(11937909-11938002)
chr2 (20-130)||(18905262-18905372)
chr2 (393-486)||(12704665-12704757)
chr2 (393-486)||(9978720-9978812)
chr2 (393-486)||(17268175-17268267)
chr2 (397-486)||(27095687-27095775)
chr2 (393-486)||(43474179-43474271)
chr2 (393-486)||(5754266-5754358)
chr2 (393-486)||(15919852-15919944)
chr2 (393-486)||(18089443-18089535)
chr2 (393-486)||(20561183-20561275)
chr2 (397-486)||(33012059-33012147)
chr2 (393-486)||(38535356-38535448)
chr2 (393-486)||(9690024-9690116)
chr2 (393-486)||(22597113-22597205)
chr2 (393-486)||(25067830-25067922)
chr2 (393-486)||(34416812-34416904)
chr2 (397-486)||(44942267-44942355)
chr2 (400-486)||(35333490-35333575)
chr2 (397-486)||(4604358-4604446)
chr2 (393-486)||(7072999-7073091)
chr2 (393-486)||(36867986-36868078)
chr2 (393-486)||(31908867-31908959)
chr2 (393-482)||(38384497-38384585)
chr2 (394-486)||(13740711-13740801)
chr2 (393-482)||(34963121-34963208)
chr2 (393-486)||(32015198-32015294)
chr2 (393-486)||(13879057-13879157)
chr2 (393-486)||(14019182-14019282)
chr2 (403-486)||(34470952-34471036)
chr2 (394-486)||(4739310-4739399)
chr2 (406-486)||(10287057-10287135)
chr2 (397-452)||(28261977-28262032)
chr2 (393-431)||(12891194-12891232)
chr2 (397-486)||(17767602-17767690)
chr2 (441-486)||(4426709-4426753)
chr2 (403-483)||(4732059-4732138)
chr2 (439-486)||(32314466-32314512)
chr2 (393-431)||(41797593-41797631)
[»] chr7 (39 HSPs)
chr7 (20-121)||(43899849-43899950)
chr7 (396-486)||(17473774-17473863)
chr7 (396-486)||(17579351-17579440)
chr7 (395-486)||(9785297-9785387)
chr7 (393-486)||(17509255-17509346)
chr7 (393-486)||(17543868-17543959)
chr7 (393-486)||(45457607-45457699)
chr7 (393-484)||(21990639-21990730)
chr7 (397-486)||(32740734-32740823)
chr7 (397-486)||(28664963-28665051)
chr7 (393-486)||(46026080-46026172)
chr7 (393-485)||(21603441-21603531)
chr7 (395-486)||(22747559-22747648)
chr7 (393-485)||(42644654-42644745)
chr7 (395-486)||(5684345-5684435)
chr7 (395-486)||(5709395-5709485)
chr7 (393-486)||(36579363-36579455)
chr7 (393-486)||(11832996-11833089)
chr7 (393-479)||(48304453-48304538)
chr7 (397-486)||(1281188-1281276)
chr7 (397-486)||(10574363-10574451)
chr7 (397-486)||(39533026-39533114)
chr7 (393-486)||(42603820-42603912)
chr7 (393-486)||(45482042-45482134)
chr7 (393-484)||(27535434-27535524)
chr7 (393-486)||(6667373-6667466)
chr7 (393-486)||(41287935-41288028)
chr7 (409-486)||(2622586-2622662)
chr7 (402-486)||(24320274-24320357)
chr7 (439-486)||(10094465-10094511)
chr7 (393-453)||(40761567-40761627)
chr7 (439-486)||(15674663-15674709)
chr7 (439-486)||(43847094-43847140)
chr7 (452-486)||(3266424-3266458)
chr7 (402-479)||(4621425-4621501)
chr7 (397-449)||(36719628-36719680)
chr7 (397-479)||(37376095-37376175)
chr7 (437-486)||(9720025-9720073)
chr7 (393-426)||(15674735-15674768)
[»] chr4 (43 HSPs)
chr4 (395-485)||(31521962-31522051)
chr4 (400-485)||(13965545-13965629)
chr4 (393-486)||(43244432-43244524)
chr4 (393-486)||(7060302-7060394)
chr4 (393-486)||(22757072-22757164)
chr4 (393-486)||(24825627-24825719)
chr4 (393-486)||(39837572-39837665)
chr4 (393-486)||(44757093-44757185)
chr4 (394-482)||(394329-394416)
chr4 (397-486)||(26674354-26674442)
chr4 (393-486)||(29268828-29268920)
chr4 (393-486)||(30202016-30202108)
chr4 (393-486)||(29922812-29922907)
chr4 (395-486)||(51152105-51152195)
chr4 (395-486)||(8712510-8712600)
chr4 (393-486)||(25658145-25658237)
chr4 (397-486)||(26742514-26742602)
chr4 (393-485)||(24568765-24568856)
chr4 (393-486)||(478063-478154)
chr4 (393-486)||(6911658-6911750)
chr4 (393-486)||(11210364-11210456)
chr4 (393-486)||(24100117-24100209)
chr4 (393-486)||(24611850-24611942)
chr4 (405-486)||(38944198-38944278)
chr4 (402-486)||(7083867-7083950)
chr4 (395-486)||(19745369-19745459)
chr4 (395-486)||(19794347-19794437)
chr4 (397-486)||(22049455-22049543)
chr4 (398-486)||(5814330-5814417)
chr4 (395-486)||(27394810-27394900)
chr4 (393-486)||(7084184-7084276)
chr4 (397-486)||(7861256-7861344)
chr4 (401-486)||(20399954-20400038)
chr4 (393-482)||(39523396-39523475)
chr4 (403-486)||(45351121-45351205)
chr4 (403-486)||(45360600-45360684)
chr4 (412-486)||(50801214-50801287)
chr4 (417-486)||(6881958-6882026)
chr4 (424-483)||(2447809-2447867)
chr4 (395-486)||(42197533-42197622)
chr4 (439-486)||(43493338-43493384)
chr4 (393-486)||(626600-626690)
chr4 (437-486)||(13586292-13586340)
[»] scaffold0312 (1 HSPs)
scaffold0312 (393-486)||(6115-6207)
[»] chr6 (17 HSPs)
chr6 (393-486)||(14783222-14783314)
chr6 (393-486)||(21507859-21507951)
chr6 (393-486)||(15590130-15590222)
chr6 (397-486)||(31937470-31937557)
chr6 (393-486)||(6419909-6420001)
chr6 (393-486)||(12481421-12481513)
chr6 (393-486)||(8693708-8693803)
chr6 (393-486)||(23654228-23654320)
chr6 (394-486)||(35219955-35220045)
chr6 (399-469)||(29927447-29927516)
chr6 (395-486)||(4921932-4922023)
chr6 (393-486)||(6296300-6296395)
chr6 (393-486)||(6303110-6303205)
chr6 (394-486)||(19402859-19402950)
chr6 (393-486)||(2304861-2304953)
chr6 (393-452)||(4084996-4085055)
chr6 (453-486)||(31937582-31937615)
[»] chr3 (32 HSPs)
chr3 (393-486)||(14585440-14585532)
chr3 (397-486)||(31270308-31270396)
chr3 (393-486)||(31462805-31462897)
chr3 (393-486)||(13702031-13702123)
chr3 (393-486)||(30156341-30156432)
chr3 (393-486)||(36691858-36691950)
chr3 (393-486)||(53155489-53155581)
chr3 (393-486)||(11819061-11819153)
chr3 (395-486)||(35174684-35174774)
chr3 (393-486)||(3456921-3457013)
chr3 (393-486)||(4206570-4206662)
chr3 (393-486)||(34960917-34961009)
chr3 (393-486)||(48652499-48652591)
chr3 (395-486)||(40883927-40884018)
chr3 (395-486)||(54239077-54239167)
chr3 (393-486)||(49628146-49628239)
chr3 (397-486)||(32080813-32080901)
chr3 (393-486)||(38527241-38527333)
chr3 (398-486)||(40013331-40013421)
chr3 (393-486)||(48400877-48400969)
chr3 (393-483)||(27189456-27189545)
chr3 (393-486)||(36624753-36624845)
chr3 (397-486)||(19645203-19645291)
chr3 (397-486)||(41868353-41868442)
chr3 (393-486)||(55090642-55090734)
chr3 (393-476)||(1074962-1075044)
chr3 (411-486)||(22484961-22485035)
chr3 (393-486)||(39610182-39610282)
chr3 (399-477)||(53402614-53402691)
chr3 (437-486)||(4817889-4817937)
chr3 (398-486)||(24483737-24483824)
chr3 (437-486)||(54706727-54706776)
[»] chr1 (28 HSPs)
chr1 (393-486)||(424342-424434)
chr1 (393-486)||(7995611-7995703)
chr1 (395-486)||(32784088-32784178)
chr1 (397-486)||(3232770-3232858)
chr1 (393-486)||(33487081-33487173)
chr1 (393-486)||(28678181-28678273)
chr1 (397-486)||(29205267-29205355)
chr1 (393-486)||(12871599-12871691)
chr1 (397-486)||(14265266-14265354)
chr1 (393-484)||(42490871-42490961)
chr1 (393-486)||(18343592-18343684)
chr1 (393-486)||(27534677-27534769)
chr1 (397-486)||(20411555-20411643)
chr1 (393-486)||(45193677-45193769)
chr1 (401-486)||(4882410-4882494)
chr1 (410-486)||(37822396-37822471)
chr1 (393-486)||(45750456-45750548)
chr1 (397-486)||(4871077-4871165)
chr1 (397-486)||(13488587-13488675)
chr1 (393-486)||(42276335-42276426)
chr1 (393-449)||(33939089-33939145)
chr1 (439-486)||(44517171-44517217)
chr1 (398-478)||(33125865-33125943)
chr1 (400-482)||(17347584-17347664)
chr1 (445-486)||(10627029-10627070)
chr1 (441-486)||(51418040-51418083)
chr1 (398-426)||(13869627-13869655)
chr1 (442-486)||(29726647-29726690)
[»] scaffold1379 (2 HSPs)
scaffold1379 (393-486)||(1137-1229)
scaffold1379 (441-486)||(1-45)
[»] chr8 (29 HSPs)
chr8 (393-486)||(37612631-37612723)
chr8 (393-482)||(2025272-2025360)
chr8 (393-486)||(10147924-10148017)
chr8 (397-486)||(10338881-10338969)
chr8 (393-482)||(11161860-11161948)
chr8 (393-486)||(39067748-39067840)
chr8 (397-486)||(2234529-2234617)
chr8 (397-486)||(12329608-12329696)
chr8 (398-486)||(9501572-9501660)
chr8 (395-486)||(41361712-41361802)
chr8 (393-482)||(1810283-1810370)
chr8 (393-486)||(30026939-30027031)
chr8 (397-486)||(31202440-31202528)
chr8 (393-486)||(31407807-31407899)
chr8 (393-486)||(13570785-13570877)
chr8 (393-486)||(14600757-14600849)
chr8 (393-486)||(23971153-23971245)
chr8 (393-486)||(24791227-24791319)
chr8 (393-486)||(31308120-31308218)
chr8 (400-486)||(1039952-1040037)
chr8 (397-486)||(24699812-24699902)
chr8 (439-486)||(37128545-37128591)
chr8 (400-486)||(3204815-3204899)
chr8 (400-486)||(10334159-10334244)
chr8 (393-453)||(7583855-7583915)
chr8 (423-486)||(15288857-15288919)
chr8 (423-486)||(15469226-15469288)
chr8 (449-486)||(22787525-22787562)
chr8 (399-486)||(30039390-30039476)
[»] chr5 (28 HSPs)
chr5 (393-486)||(17331306-17331398)
chr5 (393-486)||(28040607-28040699)
chr5 (393-486)||(32347765-32347858)
chr5 (399-482)||(17699537-17699619)
chr5 (393-486)||(43493850-43493942)
chr5 (398-486)||(42609127-42609214)
chr5 (394-486)||(20483165-20483256)
chr5 (397-486)||(27241046-27241134)
chr5 (393-486)||(33164519-33164611)
chr5 (393-486)||(17096290-17096385)
chr5 (395-486)||(29097769-29097859)
chr5 (400-486)||(34431045-34431130)
chr5 (393-486)||(6281022-6281114)
chr5 (393-486)||(23882167-23882259)
chr5 (393-486)||(26295109-26295201)
chr5 (393-452)||(7771890-7771949)
chr5 (393-486)||(6635227-6635320)
chr5 (397-486)||(6681925-6682013)
chr5 (398-486)||(178157-178244)
chr5 (398-486)||(12439685-12439771)
chr5 (393-486)||(3740336-3740427)
chr5 (397-486)||(981076-981164)
chr5 (397-486)||(39531454-39531540)
chr5 (445-486)||(12891706-12891746)
chr5 (425-486)||(39179879-39179939)
chr5 (407-486)||(42396563-42396641)
chr5 (441-486)||(17687231-17687275)
chr5 (393-453)||(6887244-6887304)
[»] scaffold0536 (1 HSPs)
scaffold0536 (393-486)||(2878-2972)
[»] scaffold0155 (1 HSPs)
scaffold0155 (398-484)||(35065-35150)
[»] scaffold0056 (1 HSPs)
scaffold0056 (393-486)||(74142-74234)
[»] scaffold0321 (1 HSPs)
scaffold0321 (405-486)||(7175-7255)
[»] scaffold0001 (1 HSPs)
scaffold0001 (393-486)||(404309-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (395-486)||(2468-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (393-482)||(13300-13392)
[»] scaffold0294 (1 HSPs)
scaffold0294 (400-486)||(4118-4202)


Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 22 - 303
Target Start/End: Complemental strand, 11938473 - 11938190
Alignment:
Q  22 ccatacaagtttgattcaaaatctggattgaagaatttgtatgcgtgaaccttcatcaagaactgaatcttcatcaaaatccatcattccgtatctggat 121  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11938473 ccatacaagtttgattcaaaatatggattgaagaatttgtacgcgtgaaccttcatcaagaactgaatcttcatcaaaatccatcattccgtatctggat 11938374  T
Q  122 tggatccgattcagattcttgttgttataaatttcttgttgttcttaagaatctggattagatcagattccgaatttggattgttgtttcaatttgattc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  11938373 tggatccgattcagattcttgttgttataaatttcttgttgttcataagaatctggattagatccgattccgaatctggattgttgtttcagtttgattc 11938274  T
Q  222 ttgttgctgtaaatttctagttgttcata--aatctagattagatccgatttcgaatatggattgttgtttcagtttgattctt 303  Q
    ||| || | ||||||||| |||||||| |  ||| | ||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  11938273 ttgctgttataaatttcttgttgttcaaaagaatttggattagatctgattccgaatatggattgttgtttcattttgattctt 11938190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 135 - 332
Target Start/End: Complemental strand, 11938278 - 11938081
Alignment:
Q  135 gattcttgttgttataaatttcttgttgttcttaagaatctggattagatcagattccgaatttggattgttgtttcaatttgattcttgttgctgtaaa 234  Q
    |||||||| ||||||||||||||||||||||  |||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||| | ||||    
T  11938278 gattcttgctgttataaatttcttgttgttcaaaagaatttggattagatctgattccgaatatggattgttgtttcattttgattcttgttgttataaa 11938179  T
Q  235 tttctagttgttcataaatctagattagatccgatttcgaatatggattgttgtttcagtttgattctttcagtttgatgaatatttatatggtaaaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11938178 tttctagttgttcataaatctagattagatccgatttcgaatctggattgttgtttcagtttgattctttcagtttgatgaatatttatatggtaaaa 11938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 11938002 - 11937909
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11938002 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgatttcacatattt 11937909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 18905262 - 18905372
Alignment:
Q  20 gcccatacaagtttgattcaaaatctggattgaagaatttgtatgcgtgaaccttcatcaagaactgaatcttcatcaaaatccatcattccgtatctgg 119  Q
    |||||||||  ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||     
T  18905262 gcccatacagatttgattcaaaatatggattgaagaaattttatgcgtgaaccttcatcaagaactgaatcttcatcaaactccatcatttcgaatctga 18905361  T
Q  120 attggatccga 130  Q
    ||| |||||||    
T  18905362 attagatccga 18905372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 12704665 - 12704757
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||    
T  12704665 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttcc-ttatatcctaattgaataagtgatttcacatattt 12704757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 9978812 - 9978720
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  9978812 agaggggtgatttaaggtcaattttgacccaaaaatcaccccttcaaattgtttttccttt-tatcttaattgaataaatgatttcacatattt 9978720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 17268267 - 17268175
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||  ||||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  17268267 agaggggtgatttatggtcaattttgacccaaaaatcatcccttcgagttgtttttcc-ttctatcctaattgaataagtgatttcacatattt 17268175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 27095687 - 27095775
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| |||||||||||||||||||||||||||||||||||    
T  27095687 gggtgatttagggtcaattttgacctaaaaatcacccctccgagttgtttttcc-ttctatcctaattgaataagtgatttcacatattt 27095775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 43474271 - 43474179
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| | | | |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43474271 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgtttttcc-ttctatcctaattgaataagtgatttcacaaattt 43474179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 5754266 - 5754358
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||  ||| | |||||||||||| |||||||||| |||||||| |||||||||||||||    
T  5754266 agaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattgtttttcc-ttctatcctagttgaataaatgatttcacatattt 5754358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 15919852 - 15919944
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||| | | |||||||||| ||||||||||||||||||| |||||||||||||||    
T  15919852 agaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttgtttttcc-ttctatcctaattgaataaatgatttcacatattt 15919944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 18089535 - 18089443
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| | ||||||||| ||| | |||||||||| | || ||||||||||||||||||||||||||||||||    
T  18089535 agaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattgttttttc-ttatatcctaattgaataagtgatttcacatattt 18089443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 20561275 - 20561183
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||||||| ||| ||||||||| ||||||||||||    
T  20561275 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcc-ttctatccaaatcgaataagtggtttcacatattt 20561183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 33012059 - 33012147
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||| | | | |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttcc-ttctattctaattgaataagtgatttcacatattt 33012147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 38535448 - 38535356
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||  |||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  38535448 agaggggtgatttagggtcaattttgacccaaaaagcacccctttgaattttttttcc-ttctatcataattgaataagtgatttcacatattt 38535356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 9690116 - 9690024
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||| ||||||| ||||||||| ||| | || ||||||||| |||||||||||||||||||||||| ||||||||||    
T  9690116 agaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactgtttttcc-ttctatcctaattgaataagtgatctcacatattt 9690024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 22597113 - 22597205
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||  ||| | | |||||||||| ||||||||||||| |||||||||||||||||||||    
T  22597113 agaggggtgatttaaggtcaattttgacccaaaaatcatccctccgagttgtttttcc-ttctatcctaattaaataagtgatttcacatattt 22597205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 25067830 - 25067922
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| | | |||||||||| ||||||  |||||||||||||||||||||||||||    
T  25067830 agagaggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttcc-ttctattttaattgaataagtgatttcacatattt 25067922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 34416904 - 34416812
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||| || |||||||||||||||||||||||  ||| | ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34416904 agagggatgatctaaggtcaattttgaccaaaaaatcatccctccgaattgtttttcctta-tatcctaattgaataagtgatttcacatattt 34416812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 44942267 - 44942355
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||| ||||||||| ||| | | |||||||| ||| |||||||||||||||||||||||||||||||||    
T  44942267 gggtgatttatggtcaattttgacccaaaaatcacccctccgagttgttttttctt-ctatcctaattgaataagtgatttcacatattt 44942355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 400 - 486
Target Start/End: Original strand, 35333490 - 35333575
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||| |||||||||||| ||||||||| |||   |||||||||||||  |||||||||||||||||||||||||||||||||    
T  35333490 tgatttaggatcaattttgacccaaaaatcacccctaagaattgtttttcctg-ctatcctaattgaataagtgatttcacatattt 35333575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 4604446 - 4604358
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||| |||||| || | ||| | |||||||||||| |||| ||||||||||||||||||||||||||||    
T  4604446 gggtgatttaaggtcaattttgacccaaaaattactcattcgagttgtttttcctt-ctattctaattgaataagtgatttcacatattt 4604358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 7073091 - 7072999
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||| | | ||| ||||| |||||| ||||||||||||||||||||| | |||||| ||||    
T  7073091 agaggggtgatttagggtcaattttgacccaaaaatcgccctttcgaattggttttcc-ttctatcctaattgaataagtaacttcacaaattt 7072999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 36867986 - 36868078
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||  ||||||||| |||   |||||||||||| |||||| |||||| |||||| ||||||||||||||    
T  36867986 agaggggtgatttagggtcaattttgactcaaaaatcacccctctgaattgtttttcc-ttctattctaattcaataagcgatttcacatattt 36868078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 31908959 - 31908867
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||||||| ||||||||||| | ||||||||| | | | |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  31908959 agagggatgatttagagtcaattttgatccaaaaatcacccttccgaattgttttttcttt-tatcctagttgaataagtgatttcacatattt 31908867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 38384585 - 38384497
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    ||||||||||||| ||||||||||||||| |||||||||  || | | |||||||||| || || |||||||||||||||||||||||||    
T  38384585 agaggggtgattttgggtcaattttgacccaaaaatcacatctccgatttgtttttcc-ttataccctaattgaataagtgatttcacat 38384497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 486
Target Start/End: Complemental strand, 13740801 - 13740711
Alignment:
Q  394 gaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||| ||||||| ||||| |||||||| |||||||||  || | |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  13740801 gagggatgatttatggtca-ttttgacccaaaaatcaccactccgaattgtttttcctt-ctatcctaattgaataagtgatttcatatattt 13740711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 34963208 - 34963121
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    |||||||| |||| ||||||||||||||| ||||||||| |||   | |||||||||||| ||| |||||||||||||||||||||||||    
T  34963208 agaggggtaattttgggtcaattttgacctaaaaatcac-cctctgatttgtttttcctt-ctaccctaattgaataagtgatttcacat 34963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 32015198 - 32015294
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaat----tgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| || |||| ||||    | |||||||||||||||||||||    
T  32015198 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcc-ttatatcataattcaataaataagtgatttcacatattt 32015294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 13879157 - 13879057
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttct-------atcctaattgaataagtgatttcacatatt 485  Q
    |||||| |||||||||||||||||||||| || |||||| ||| | | ||||||||  |||||       ||||||||||||||||||||||||||||||    
T  13879157 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatatt 13879058  T
Q  486 t 486  Q
    |    
T  13879057 t 13879057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 14019282 - 14019182
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttct-------atcctaattgaataagtgatttcacatatt 485  Q
    |||||| |||||||||||||||||||||| || |||||| ||| | | ||||||||  |||||       ||||||||||||||||||||||||||||||    
T  14019282 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatatt 14019183  T
Q  486 t 486  Q
    |    
T  14019182 t 14019182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 403 - 486
Target Start/End: Original strand, 34470952 - 34471036
Alignment:
Q  403 tttagggtcaattttgaccaaaaaatcacgcc--ttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||| ||||||||| ||  | | |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  34470952 tttagggtcaattttgacccaaaaatcacacccctccgaattgtttatc-tttctatcttaattgaatcagtgatttcacatattt 34471036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 486
Target Start/End: Original strand, 4739310 - 4739399
Alignment:
Q  394 gaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||  ||||  |||||||| ||| | | |||||||||||| | ||||||||| ||||||| |||||||||||||    
T  4739310 gaggggtgatttagggtcaatt--gaccccaaaatcacccctccgagttgtttttccttcc-atcctaattaaataagtaatttcacatattt 4739399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 10287135 - 10287057
Alignment:
Q  406 agggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||  ||||||||| ||| | |||||  |||| |||  |||||||||||||||||||||||||||||||    
T  10287135 agggtcaattttgacataaaaatcacccctccgaattgcatttctttt--atcctaattgaataagtgatttcacatattt 10287057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 28262032 - 28261977
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctt 452  Q
    ||||||||||||||||||||||||| ||||||||| | | | ||||||||||||||    
T  28262032 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttcctt 28261977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 12891232 - 12891194
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcac 431  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  12891232 agaggggtgatttagggtcaattttgacccaaaaatcac 12891194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 17767690 - 17767602
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgattt-cacatattt 486  Q
    ||||||||||| |||||||||||||  | |||||| ||||| | |||||||||| || |||||||||| |||||||||||| |||||||||    
T  17767690 gggtgatttagagtcaattttgacc-cagaatcaccccttcgagttgtttttcc-ttatatcctaattaaataagtgatttccacatattt 17767602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 441 - 486
Target Start/End: Complemental strand, 4426753 - 4426709
Alignment:
Q  441 ttgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||    
T  4426753 ttgtttttcctt-ctatcctaattgaataaatgatttcacatattt 4426709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 483
Target Start/End: Original strand, 4732059 - 4732138
Alignment:
Q  403 tttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacata 483  Q
    ||||||||||||||||||  ||||||||| | |   | |||  ||||||| ||||||||||||||||||||||||||||||    
T  4732059 tttagggtcaattttgactcaaaaatcacccttgttagttgcatttcctt-ctatcctaattgaataagtgatttcacata 4732138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 486
Target Start/End: Original strand, 32314466 - 32314512
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  32314466 aattgttttttctt-ctatcctaattgaataaatgatttcacatattt 32314512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 41797593 - 41797631
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcac 431  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  41797593 agaggggtgatttagggttaattttgacctaaaaatcac 41797631  T

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Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 43899849 - 43899950
Alignment:
Q  20 gcccatacaagtttgattcaaaatctggattgaagaatttgtatgcgtgaaccttcatcaagaactgaatcttcatcaaaatccatcattccgtatctgg 119  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  43899849 gcccatacaggtttgattcaaaatctggattgaagaatttttatgcgtaaaccttcatcaagaactgaatctttatcaaaatccatcatttcgaatctgg 43899948  T
Q  120 at 121  Q
    ||    
T  43899949 at 43899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 396 - 486
Target Start/End: Complemental strand, 17473863 - 17473774
Alignment:
Q  396 ggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17473863 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttt-tatcctaattgaataagtgatttcacatattt 17473774  T

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Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 396 - 486
Target Start/End: Original strand, 17579351 - 17579440
Alignment:
Q  396 ggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17579351 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttt-tatcctaattgaataagtgatttcacatattt 17579440  T

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Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 9785297 - 9785387
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttcc-ttctatcttaattgaataagtgatttcacatattt 9785387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 17509346 - 17509255
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||||||||||||||||||||||||||||||| ||| | |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  17509346 agagggatgatttagggtcaattttgaccaaaaaatcac-cctccgaattatttttccttt-tatcctaattgaataagtgatttcacatattt 17509255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 17543868 - 17543959
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||||||||||||||||||||||||||||||| ||| | |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  17543868 agagggatgatttagggtcaattttgaccaaaaaatcac-cctccgaattatttttccttt-tatcctaattgaataagtgatttcacatattt 17543959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 45457699 - 45457607
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||  ||||||||| ||| | |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  45457699 agaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattgtttttcc-ttctatcttaattgaataagtgatttcacatattt 45457607  T

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Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 21990639 - 21990730
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatat 484  Q
    ||||||||||||||||||||||||||||  ||||||||| ||| | |||||||||| | | |||||||||||||||||||||||||||||||    
T  21990639 agaggggtgatttagggtcaattttgactgaaaaatcacccctccgaattgttttttcctgctatcctaattgaataagtgatttcacatat 21990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 32740734 - 32740823
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaa-tcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||| ||||||||||||||||||| |||| || || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  32740734 gggtgatttagagtcaattttgaccaaaaaaatcaccccctcgaattgtttttcctt-ctatcctaattgaataagtgatttcacatattt 32740823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 28665051 - 28664963
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||  |||||||| ||| | | |||||||||||| |||||||||||||||||||||||||||||||||    
T  28665051 gggtgatttagggtcaattttgaccctaaaatcacccctccgagttgtttttcctt-ctatcctaattgaataagtgatttcacatattt 28664963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 46026172 - 46026080
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| | | | |||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  46026172 agaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattgtttttcc-ttctatcctaattgaataagttatttaacatattt 46026080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 21603441 - 21603531
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatatt 485  Q
    ||||||||||||||||||||||||||||||||||  ||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||    
T  21603441 agaggggtgatttagggtcaattttgaccaaaaag-cacccctctgaattgtttttcctt-ctatcctaattgaataagtgatttcacatatt 21603531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 22747648 - 22747559
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||  | |||||||||||||||||||||||||| ||||||||    
T  22747648 aggggtgatttagggtcaattttgacccaaaaatcacccctccaagttgtttt--ccttctatcctaattgaataagtgatttgacatattt 22747559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 42644654 - 42644745
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatatt 485  Q
    |||||||||||||||| |||||||||||  ||||||||| | ||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  42644654 agaggggtgatttaggatcaattttgactcaaaaatcactcatttgaattgtttttcctt-ctatcctaattgaataagtgatttcacatatt 42644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 5684345 - 5684435
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||  |||||||||  || | ||||||||||| || |||||||||||||||||||||||||||||||||    
T  5684345 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcatt-ctatcctaattgaataagtgatttcacatattt 5684435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 5709395 - 5709485
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||  |||||||||  || | ||||||||||| || |||||||||||||||||||||||||||||||||    
T  5709395 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcatt-ctatcctaattgaataagtgatttcacatattt 5709485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 36579455 - 36579363
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| ||||||||||||||||||||||  |||||||| ||| | |||||||||||| |||||||||| |||||||||||||| |||||||||    
T  36579455 agagggatgatttagggtcaattttgacccgaaaatcacccctccgaattgtttttcc-ttctatcctagttgaataagtgattccacatattt 36579363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 11832996 - 11833089
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttca-aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| ||||||| |||||||||||||| ||||||||| || ||  |||||||||||||| || ||||||||||||||||||||||||||||||    
T  11832996 agagggatgatttatggtcaattttgacccaaaaatcaccccctccgaattgtttttcctt-ctttcctaattgaataagtgatttcacatattt 11833089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 479
Target Start/End: Complemental strand, 48304538 - 48304453
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttca 479  Q
    ||||||||||||||||||||||||||||| ||||||||| | | | ||||| |||||| | ||||||||||||||||||||||||||    
T  48304538 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgcttttcc-tgctatcctaattgaataagtgatttca 48304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 1281276 - 1281188
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||||||||||||| | | | |||||||||| | || ||| ||||||||||||||||||||||||||||    
T  1281276 gggtgatttagggtccattttgaccaaaaaatcacccatccgaattgttttt-cattatattctaattgaataagtgatttcacatattt 1281188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 10574363 - 10574451
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||  ||||||||| ||| | ||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  10574363 gggtgatttagggtcaattttgactcaaaaatcacccctccgaattgtttttccttt-tatcctaattgaataaacgattttacatattt 10574451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 39533114 - 39533026
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||   ||   |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatcatctctctgaattgtttttcctt-ctatcttaattgaataagtgatttcacatattt 39533026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 42603912 - 42603820
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| ||||||||| |||||||||||||  ||||||||| ||| | ||||||||||| || ||||| |||||||||||||||||||||||||||    
T  42603912 agagcggtgatttatggtcaattttgactcaaaaatcacccctccgaattgtttttcatt-ctatcataattgaataagtgatttcacatattt 42603820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 45482042 - 45482134
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||| |||||||||||||||||||||||  |||||||| ||| | |  ||||||||||| ||||||||||| |||||||||||||||||||||    
T  45482042 agaggagtgatttagggtcaattttgaccccaaaatcacccctccgagctgtttttcctt-ctatcctaattaaataagtgatttcacatattt 45482134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 27535434 - 27535524
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatat 484  Q
    ||||||||||||||||||||||||| | | ||||||||| | | | |||||||||||| |||||| ||||||| ||||||||||||||||||    
T  27535434 agaggggtgatttagggtcaatttttatccaaaaatcacccatccgaattgtttttcc-ttctattctaattgtataagtgatttcacatat 27535524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 6667373 - 6667466
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaa-ttgaataagtgatttcacatattt 486  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||  | |||||||||| | |||||| |||| ||||||||||||||||||||||||    
T  6667373 agaggagtgatttagggtcaattttgacccaaaaatcaccccaccgaattgttttttc-ttctattctaatttgaataagtgatttcacatattt 6667466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 41287935 - 41288028
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| || |||||| | | | | |  ||||| | |||||||||||||||||| ||||||||||||||||    
T  41287935 agaggggtgatttagggtcaattttgacccaataatcacccatccgagtgattttttccttctatcctaattgaataggtgatttcacatattt 41288028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 486
Target Start/End: Original strand, 2622586 - 2622662
Alignment:
Q  409 gtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||| ||||||||||| | | |||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  2622586 gtcaattttgacccaaaaatcacgcatccgaattgtttttcc-ttctatcttaattgaataagtaatttcagatattt 2622662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 24320357 - 24320274
Alignment:
Q  402 atttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||| |||||||||||||  ||||||||| | ||| | |||||||||||| ||||| ||||| |||||||||||||||||||||    
T  24320357 atttaaggtcaattttgactcaaaaatcactcattcgagttgtttttcctt-ctatcttaatttaataagtgatttcacatattt 24320274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 486
Target Start/End: Original strand, 10094465 - 10094511
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10094465 aattgtttttccttt-tatcctaattgaataagtgatttcacatattt 10094511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 453
Target Start/End: Original strand, 40761567 - 40761627
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttccttt 453  Q
    |||||| |||||||||||||||||||||| ||||||||| ||| | || ||||||||||||    
T  40761567 agagggatgatttagggtcaattttgacccaaaaatcacccctccgaactgtttttccttt 40761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 439 - 486
Target Start/End: Complemental strand, 15674709 - 15674663
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||    
T  15674709 aattgtttttcctc-ctatcctaattgaataagtgatttcacatattt 15674663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 439 - 486
Target Start/End: Original strand, 43847094 - 43847140
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  43847094 aattgtttttcctct-tatcctaattgaataagtgatttcacatattt 43847140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 486
Target Start/End: Original strand, 3266424 - 3266458
Alignment:
Q  452 ttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||||||||||||    
T  3266424 ttctatcctaattgaataagtgatttcacatattt 3266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 4621501 - 4621425
Alignment:
Q  402 atttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttca 479  Q
    |||||| ||||||||||||| ||||||||| | ||| | |||||||||| ||||| | |||||||||||| |||||||    
T  4621501 atttagagtcaattttgacctaaaaatcactctttcgagttgtttttcc-ttctaccataattgaataagcgatttca 4621425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 36719680 - 36719628
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttc 449  Q
    ||||||||||||||||||||||| | ||||||||| ||| | |||||||||||    
T  36719680 gggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttc 36719628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 479
Target Start/End: Complemental strand, 37376175 - 37376095
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttca 479  Q
    |||||||||||| | |||||||||  ||| ||||| ||||| |||| ||||||| |||||| ||||||||||||||| |||||    
T  37376175 gggtgatttaggataaattttgactcaaagatcaccccttcgaattatttttcc-ttctat-ctaattgaataagtggtttca 37376095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 9720073 - 9720025
Alignment:
Q  437 caaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||  |||| |||||||||||||||||||||||||||    
T  9720073 caaattgttttttctta-tatcgtaattgaataagtgatttcacatattt 9720025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 15674768 - 15674735
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaa 426  Q
    ||||||||||||||||||||||||||||| ||||    
T  15674768 agaggggtgatttagggtcaattttgacctaaaa 15674735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 31521962 - 31522051
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatatt 485  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  31521962 aggggtgatttagggtcaattttgacctaaaaatcacccctccgaattgtttttcc-ttctatcctaattgaataagtgatttcacatatt 31522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 400 - 485
Target Start/End: Original strand, 13965545 - 13965629
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatatt 485  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  13965545 tgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttcc-ttctatcctaattgaataagtgatttcacatatt 13965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 43244524 - 43244432
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||    
T  43244524 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttcc-ttctatcctaattgaataagtgatttcacatattt 43244432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 7060302 - 7060394
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||| |||||||||||||||| ||| ||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  7060302 agaggggtaatttagggtcaattttaacccaaaaatcacccctccgaattgtttttcc-ttctatcctaattgaataagtgatttcacatattt 7060394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 22757072 - 22757164
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||  |||||||||  || | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22757072 agaggggtgatttagggtcaattttgactcaaaaatcaccactccgaattgtttttcc-ttctatcctaattgaataagtgatttcacatattt 22757164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 24825627 - 24825719
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| | | |||||||||| |||||||||||||||||||||||||||||||||||    
T  24825627 agaggggtgatttaggatcaattttgacctaaaaatcactcctccgagttgtttttcc-ttctatcctaattgaataagtgatttcacatattt 24825719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 39837572 - 39837665
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||| | || ||||||| || ||||||||||||||||||||||||||||||||    
T  39837572 agaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttcacatattt 39837665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 44757185 - 44757093
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| | ||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  44757185 agaggggtgatttaaggtcaattttgacccaaaaatcacccattcgagttgtttttcc-ttctatcctaattgaataagtgatttcacatattt 44757093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 394416 - 394329
Alignment:
Q  394 gaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    |||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||||||||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcc-ttctatcctaattcaataagtgatttcacat 394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 26674354 - 26674442
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  26674354 gggtgatttaggatcaattttgacctaaaaatcacccctccaaattgcttttcc-ttctatcataattgaataagtgatttcacatattt 26674442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 29268920 - 29268828
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| ||||||||||||||  |||||||| ||| | | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  29268920 agaggggtgatttaaggtcaattttgaccctaaaatcacccctccgagttgtttttccttt-tatcctaattgaataagtgatttcacatattt 29268828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 30202016 - 30202108
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||| | ||||||||| ||||| | ||||||||||||| |||| |||||||||||||||||||||||||||    
T  30202016 agaggggtgatttaaggtcaattttgatccaaaaatcaccccttctagttgtttttccttt-tatcttaattgaataagtgatttcacatattt 30202108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 29922812 - 29922907
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttc--ctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||||||||||||||||||||||| || |||||| ||| ||| ||||||||   |||||||||||||||||||||||||||||||||||||    
T  29922812 agagaggtgatttagggtcaattttgacctaataatcacccctccaagttgttttttttctttctatcctaattgaataagtgatttcacatattt 29922907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 51152105 - 51152195
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| ||||||| |||||| ||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccctccgaattgtttttcc-ttctatcctaatttaataagtgatttcacatattt 51152195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 8712510 - 8712600
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||||||||| |||   |||||||||||| |||||||||| |||| |||||||||||||||||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccctcataattgtttttcc-ttctatcctagttgagtaagtgatttcacatattt 8712600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 25658145 - 25658237
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||| |||||||||  |||||||||  || |||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  25658145 agaggggtgatttagggttaattttgactcaaaaatcacctctccaaattgtttttcc-ttctttcctaatttaataagtgatttcacatattt 25658237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 26742602 - 26742514
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||||||||| ||||||||| | | | ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  26742602 gggtgatttaggatcaattttgacccaaaaatcacccatccgaattgtttttc-tttctatcttaattgaataagtgatttcacatattt 26742514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 24568856 - 24568765
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatatt 485  Q
    |||||||||||||||||| |||||||||| ||||||||| | | | |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  24568856 agaggggtgatttagggtgaattttgacccaaaaatcacccttccgaattatttttcc-ttctatcctaattgaataagtgattttacatatt 24568765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 478154 - 478063
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| | | | |||||||||||| || ||||||||||||||||||||||| ||||||||    
T  478154 agaggggtgatttatggtcaattttgacccaaaaatcac-catccgaattgtttttcc-ttatatcctaattgaataagtgattttacatattt 478063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 6911658 - 6911750
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| | |||||||||  || | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  6911658 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgatttgtttttcc-ttctaccttaattgaataagtgatttcacatattt 6911750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 11210456 - 11210364
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||| || ||||||||| ||| | |||| ||||||| | | ||| |||||||||||||||||||||||||||    
T  11210456 agaggggtgatttagggtcaattttgccctaaaaatcacccctccgaattatttttcc-tcccatcataattgaataagtgatttcacatattt 11210364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 24100117 - 24100209
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| |||||||||| | |||||| || | | | |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24100117 agaggggtgatttaggatcaattttgaaccaaaaattacccatccgaattgtttttcctt-ctatcgtaattgaataagtgatttcacatattt 24100209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 24611942 - 24611850
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||| | || |  |||||| |||||||||||||||||||||||||||||||||||    
T  24611942 agaggggtgatttatggtcaatttagacccaaaaatcacccct-ctaagtcattttcccttctatcctaattgaataagtgatttcacatattt 24611850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 38944278 - 38944198
Alignment:
Q  405 tagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| || ||||||||| ||| |||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  38944278 tagggtcaattttggcccaaaaatcacccctccaaattgtttttcc-ttctatcgtagttgaataagtgatttcacatattt 38944198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 7083950 - 7083867
Alignment:
Q  402 atttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||| | ||||||||| |||   |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  7083950 atttagggtcaattttgatccaaaaatcacccctatgaattgtttttcctt-ctatcataattgaataagtgatttcacatattt 7083867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 19745369 - 19745459
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||| ||||||||  | | | |||||||||| |||| |||||||||||||||| |||||||||||||||    
T  19745369 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttt-tatcctaattgaataattgatttcacatattt 19745459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 19794437 - 19794347
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||| ||||||||  | | | |||||||||| |||| |||||||||||||||| |||||||||||||||    
T  19794437 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttt-tatcctaattgaataattgatttcacatattt 19794347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 22049543 - 22049455
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgattt-cacatattt 486  Q
    |||||||||||||| |||||||||| |||| |||| | ||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  22049543 gggtgatttagggttaattttgacccaaaa-tcaccctttcgaattgtttttcctt-ctatcctaattgaataagtgatttccacatattt 22049455  T

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Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 5814330 - 5814417
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||| | ||||||||  ||| ||| ||||||| |||| ||||| ||||||||||||| |||||||||||||    
T  5814330 ggtgatttagggtcaattttgatccaaaaatcatccctccaagttgttttccctt-ctatcttaattgaataagttatttcacatattt 5814417  T

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Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 27394810 - 27394900
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||||||||| | | |  ||| ||||||| ||||||||||||||||||||| |||| | ||||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcacccttccggattatttttcc-ttctatcctaattgaataagtaatttaaaatattt 27394900  T

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Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 7084184 - 7084276
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| |||||||||||| |||||| | || | | | |||||||||| ||||| | ||||||||||||||||| |||||||||    
T  7084184 agaggggtgatttaggttcaattttgacccaaaaattatgcttccgatttgtttttcc-ttctaccttaattgaataagtgattgcacatattt 7084276  T

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Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 7861344 - 7861256
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||  |||||||||||| |||||||||  ||   |||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  7861344 gggtgatttagaatcaattttgacccaaaaatcaccactctgaattatttttcctt-ctatcctaattaaataagtgatttcacatattt 7861256  T

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Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 20400038 - 20399954
Alignment:
Q  401 gatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||| ||||||||| |   | ||||| |||| | |||||||||||||||||||||||||||| ||||||    
T  20400038 gatttagggtcaattttgacccaaaaatcacccacccgaattgctttttc-ttctatcctaattgaataagtgatttcatatattt 20399954  T

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Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 39523396 - 39523475
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    ||||||||||||||| ||||||||||||| ||||||||         |||||||||||||| ||||||||||||||||||||||||||||    
T  39523396 agaggggtgatttagagtcaattttgacccaaaaatca---------attgtttttccttt-tatcctaattgaataagtgatttcacat 39523475  T

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Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 486
Target Start/End: Complemental strand, 45351205 - 45351121
Alignment:
Q  403 tttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaa-ttgaataagtgatttcacatattt 486  Q
    ||||||||||||||||| | ||||||||| ||| | |||||||||| | || ||| |||| ||||||||||||||||||||||||    
T  45351205 tttagggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacatattt 45351121  T

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Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 486
Target Start/End: Complemental strand, 45360684 - 45360600
Alignment:
Q  403 tttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaa-ttgaataagtgatttcacatattt 486  Q
    ||||||||||||||||| | ||||||||| ||| | |||||||||| | || ||| |||| ||||||||||||||||||||||||    
T  45360684 tttagggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacatattt 45360600  T

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Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 50801214 - 50801287
Alignment:
Q  412 aattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||| | |||||| || ||| | |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  50801214 aattttgatctaaaaataactcctccgaattatttttccttt-tatcctaattgaataagtgatttcacatattt 50801287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 6881958 - 6882026
Alignment:
Q  417 tgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||| ||||||||| ||||| | || ||||||||| ||||||||||| |||||||||||||||||||||    
T  6881958 tgacccaaaaatcaccccttcgagttatttttcctt-ctatcctaattaaataagtgatttcacatattt 6882026  T

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Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 2447809 - 2447867
Alignment:
Q  424 aaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacata 483  Q
    |||||||| ||||| |||| |||||  |||||||||||||||||||||||||||||||||    
T  2447809 aaaatcaccccttcgaattatttttt-tttctatcctaattgaataagtgatttcacata 2447867  T

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Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 42197533 - 42197622
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| ||||||||| ||||||||||   | | |||| ||||||| ||||||||||||| ||||||||| ||||| |||||    
T  42197533 aggggtgatttagggttaattttgacaaaaaaatcac-tttccgaattatttttcc-ttctatcctaatttaataagtgacttcacgtattt 42197622  T

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Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 439 - 486
Target Start/End: Complemental strand, 43493384 - 43493338
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  43493384 aattgtttttcctt-ctatcttaattgaataagtgatttcacatattt 43493338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 626690 - 626600
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||  |||||||||| ||||||||| | |   |||| ||||||  ||||||| ||||||||||||||| |||||||||||    
T  626690 agaggggtgatttagggctaattttgacccaaaaatcacccatctgaattatttttc--ttctatcataattgaataagtga-ttcacatattt 626600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 13586340 - 13586292
Alignment:
Q  437 caaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||  |||| |||||||||||||||||||||||||||    
T  13586340 caaattgttttttctta-tatcgtaattgaataagtgatttcacatattt 13586292  T

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Target: scaffold0312 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 6115 - 6207
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| |||||||||||||||||||||||||||||||||||    
T  6115 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcc-ttctatcctaattgaataagtgatttcacatattt 6207  T

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Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 14783314 - 14783222
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  14783314 agagggctgatttagggtcaattttgacccaaaaatcacgcctccgaattgtttttcc-ttctatcctagttgaataagtgatttcacatattt 14783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 21507951 - 21507859
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21507951 agaggggtgatttagggtcaattttgacccaaacatcacccctccaaattgtttttcc-ttctatcctagttgaataagtgatttcacatattt 21507859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 15590222 - 15590130
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| |||   |||||||||| | |||||||||||||||||||||||||||||||||||    
T  15590222 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgttttttc-ttctatcctaattgaataagtgatttcacatattt 15590130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 31937557 - 31937470
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| |||||||| ||||||||| ||| | |||||||||||  |||||||||||||||||||||||||||||||||||    
T  31937557 gggtgatttagggtcagttttgacccaaaaatcacccctccgaattgtttttc--ttctatcctaattgaataagtgatttcacatattt 31937470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 6420001 - 6419909
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| | ||||||||| |||   | |||||||||||| |||||||||||||||||||||||||||||||||    
T  6420001 agaggggtgatttagggtcaattttgatccaaaaatcacccctctgagttgtttttcctt-ctatcctaattgaataagtgatttcacatattt 6419909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 12481513 - 12481421
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  12481513 agaggggtgatttaggatcaattttgacccaaaaatcacccctccgatttgtttttcc-ttctaccttaattgaataagtgatttcacatattt 12481421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 8693803 - 8693708
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttcta---tcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| | | | |||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  8693803 agaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttcc-ttctatcctcctaattgaataagtgatttcacatattt 8693708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 23654228 - 23654320
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||||||||||||||||||||||| ||||||||| | | | | |||||||||| ||||| | ||| |||||||||||||||||||||||    
T  23654228 agagaggtgatttagggtcaattttgacccaaaaatcacccatccgatttgtttttcc-ttctaccttaactgaataagtgatttcacatattt 23654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 486
Target Start/End: Complemental strand, 35220045 - 35219955
Alignment:
Q  394 gaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||||  ||||||||| ||| ||| |||||||  | |||||||| ||| ||||||||||| ||||||||||    
T  35220045 gaggggtgatttagggtcaattttgactcaaaaatcacccctccaagttgtttt--ccttctatccgaatcgaataagtgatatcacatattt 35219955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 29927516 - 29927447
Alignment:
Q  399 gtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaata 469  Q
    |||||||| |||||||||||||| ||||||||| ||| ||| |||||||||| ||||||||||||||||||    
T  29927516 gtgatttatggtcaattttgacccaaaaatcactcctccaagttgtttttcc-ttctatcctaattgaata 29927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 4922023 - 4921932
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttc-ctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| |||||| || ||| | | | ||||||  | ||||||| |||||||||||||||||||||||||||    
T  4922023 aggggtgatttagggtcaattttgacccaaaaat-acccctcccagtagtttttttccttctatcttaattgaataagtgatttcacatattt 4921932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 6296395 - 6296300
Alignment:
Q  393 agaggggtgatttagggtcaattttgacc--aaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| || ||||||||||  |||||||||  | | | |||||||||| | ||||| |||||||||||||||| ||||||||||||    
T  6296395 agaggggtgatttagagttaattttgacctaaaaaaatcattcttccgaattgttttttccttctaccctaattgaataagtggtttcacatattt 6296300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 6303205 - 6303110
Alignment:
Q  393 agaggggtgatttagggtcaattttgacc--aaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| || ||||||||||  |||||||||  | | | |||||||||| | ||||| |||||||||||||||| ||||||||||||    
T  6303205 agaggggtgatttagagttaattttgacctaaaaaaatcattcttccgaattgttttttccttctaccctaattgaataagtggtttcacatattt 6303110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 486
Target Start/End: Complemental strand, 19402950 - 19402859
Alignment:
Q  394 gaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||| |||||| | ||||||||| ||||  | |||||||||| || |||| |||||||| ||||||||||||||||||    
T  19402950 gaggggtgatttcgggtcacttttgatccaaaaatcacccctttgagttgtttttcc-ttgtatcataattgaacaagtgatttcacatattt 19402859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 2304953 - 2304861
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| || ||||||||| ||||||||  |||   | ||| |||||| |||| || |||||||||||||||||||||||||||    
T  2304953 agaggggtgatttaggatcgattttgacccaaaaatcaaccctctgagttg-ttttcccttctgtcataattgaataagtgatttcacatattt 2304861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 4084996 - 4085055
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctt 452  Q
    ||||||||||||||||||||||||||||| ||||||||  | | | ||||||||||||||    
T  4084996 agaggggtgatttagggtcaattttgaccgaaaaatcatccttccgaattgtttttcctt 4085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 486
Target Start/End: Complemental strand, 31937615 - 31937582
Alignment:
Q  453 tctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||    
T  31937615 tctatcctaattgaataagtgatttaacatattt 31937582  T

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Target: chr3 (Bit Score: 66; Significance: 6e-29; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 14585440 - 14585532
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14585440 agaggggtgatttagagtcaattttgacccaaaaatcactcctctaaattgtttttcc-ttctatcctaattgaataagtgatttcacatattt 14585532  T

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Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 31270308 - 31270396
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  31270308 gggtgatttagggtcaattttgacccaaaaatcaccccttcgaattatttttcc-ttctatcctaattgaataagtgatttcacatattt 31270396  T

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Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 31462897 - 31462805
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| || ||||||||||||||||||||||| ||||||||    
T  31462897 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttcc-ttatatcctaattgaataagtgattttacatattt 31462805  T

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Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 13702123 - 13702031
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  13702123 agaggggtgatttagggtcaattttgacccaaaagtcaccccttcgaattattttt-ctttctatcataattgaataagtgatttcacatattt 13702031  T

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Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 30156432 - 30156341
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  30156432 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg-ttttccttt-tatcctaattgaataagtgatttcacatattt 30156341  T

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Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 36691950 - 36691858
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | || ||||||| |||||||||||||||||||||||||||||||||||    
T  36691950 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttatttttcc-ttctatcctaattgaataagtgatttcacatattt 36691858  T

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Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 53155581 - 53155489
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||| || |||||||||| |||||||||||||||||||||    
T  53155581 agaggggtgatttagggtcaattttgacccaaaaatcacccattcgaattgtttttcc-ttatatcctaattcaataagtgatttcacatattt 53155489  T

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Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 11819061 - 11819153
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  11819061 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttcc-ttctaccttaattgaataagtgatttcacatattt 11819153  T

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Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 35174684 - 35174774
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| ||| ||||||||||| |||| ||||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  35174684 aggggttattaagggtcaatttcgacccaaaaatcacccctttgaattgtttttcctt-ctatcctaattgaataagtgatttcacatattt 35174774  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 3456921 - 3457013
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||| | |||||||||  || | |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  3456921 agaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattgtttttcc-ttctatcctaattgaataagtgatttaacatattt 3457013  T

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Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 4206662 - 4206570
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||| ||||||||||| ||| | ||||||||||||  | ||||||||||||||||||| ||||||||||||    
T  4206662 agaggggtgatttatggtcaattttgatcaaaaaatcacccctccgaattgtttttcc-atatatcctaattgaataagtgttttcacatattt 4206570  T

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Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 34961009 - 34960917
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||||||| ||||||||| |||   |||||||||| | |||||| ||||||||||||||||||||||||||||    
T  34961009 agaggggtgacttagggtcaattttgacccaaaaatcacccctcagaattgttttttc-ttctattctaattgaataagtgatttcacatattt 34960917  T

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Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 48652591 - 48652499
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||| | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  48652591 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgatttgtttttcc-ttctaccttaattgaataagtgatttcacatattt 48652499  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 40884018 - 40883927
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||||||||    ||| |||||||||| | || |||||||||||||||||||||||||| |||||    
T  40884018 aggggtgatttagggtcaattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttcacttattt 40883927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 54239167 - 54239077
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| ||| || ||||| ||||||||||| | | | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  54239167 aggggtgatttaaggttaaatttgatcaaaaaatcacacatccgaattgtttttcctt-ctatcctaattgaataagtgatttcacatattt 54239077  T

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Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 49628239 - 49628146
Alignment:
Q  393 agaggggtgattta-gggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||  ||||||||||||||| ||||||||| |||   |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  49628239 agaggggtgatttttgggtcaattttgacctaaaaatcacccctctgaattgtttttcctt-ctatcctagttgaataagtgatttcacatattt 49628146  T

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Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 32080901 - 32080813
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| ||||| | |||||||||| ||||||||||||||||    
T  32080901 gggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttcc-ttctaccttaattgaataggtgatttcacatattt 32080813  T

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Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 38527241 - 38527333
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| ||||| |||| | ||||||||| | | |||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  38527241 agaggggtgatttaggatcaatcttgaaccaaaaatcacacatccaaattgtttttcc-ttctatcttaattgaataaatgatttcacatattt 38527333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 40013421 - 40013331
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttcta---tcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| ||||||||||||| ||||||||| | ||| |||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  40013421 ggtgatttagtgtcaattttgacccaaaaatcacccattcgaattgtttttcc-ttctatcctcctaattgaataagtgatttcacatattt 40013331  T

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Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 48400877 - 48400969
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| | |   |||||||||||| ||||| |||| || |||||||||||||||||||||    
T  48400877 agaggggtgatttagggtcaattttgacccaaaaatcacacatcggaattgtttttcc-ttctaccctattttaataagtgatttcacatattt 48400969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 483
Target Start/End: Complemental strand, 27189545 - 27189456
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacata 483  Q
    ||||||||||||||| ||||||||||| | |||||| || | | | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  27189545 agaggggtgatttagagtcaattttgatccaaaaattactcttccgaattgtttttcctt-ctatcctaattgaataagtaatttcacata 27189456  T

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Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 36624845 - 36624753
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||||||  ||||| ||||||||| | | | |||||||||||| ||||||||||| | |||||||||||||||||||||    
T  36624845 agaggggtgattcagggtcaatcatgacccaaaaatcacccatccgaattgtttttcc-ttctatcctaactaaataagtgatttcacatattt 36624753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 19645203 - 19645291
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||| ||  | | | |||||||||| | |||| |||||||| |||||||||||||||||||||    
T  19645203 gggtgatttagggtcaattttgacctaaaaaccatccatccgaattgttttttc-ttctgtcctaattaaataagtgatttcacatattt 19645291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 41868442 - 41868353
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| | |||||||| | ||||||||| | |   | |||||||| | |||||||||||||||||||||||||||||||||||    
T  41868442 gggtgatttaggataaattttgatccaaaaatcactcatctgagttgttttttccttctatcctaattgaataagtgatttcacatattt 41868353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 55090734 - 55090642
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||| |||||  ||| ||||||||| ||| | | |||||||||| ||||| | ||||| |||||||||||||||||||||    
T  55090734 agaggggtgatttagggttaatttcaacccaaaaatcacccctccgatttgtttttcc-ttctaccttaattaaataagtgatttcacatattt 55090642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 1075044 - 1074962
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatt 476  Q
    |||||||||||||| |||||||||||||| ||||||||| | | | | |||||||||| || ||| ||||||||||||||||||    
T  1075044 agaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttgtttttcc-ttatattctaattgaataagtgatt 1074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 22484961 - 22485035
Alignment:
Q  411 caattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||| ||||||||| | | |  ||||||||||||| ||||||||||||||||||||||||| |||||||    
T  22484961 caattttgacccaaaaatcactcttccggattgtttttcctt-ctatcctaattgaataagtgatttcgcatattt 22485035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 39610182 - 39610282
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttct-------atcctaattgaataagtgatttcacatatt 485  Q
    |||||||||||||| |||||||||||||| || |||||| ||| | | ||||||||  |||||       ||||||||||||||||||||||||||||||    
T  39610182 agaggggtgatttatggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatatt 39610281  T
Q  486 t 486  Q
    |    
T  39610282 t 39610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 477
Target Start/End: Original strand, 53402614 - 53402691
Alignment:
Q  399 gtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgattt 477  Q
    |||||||| |||||||||||||| ||||||||| | | | |||||||||||| |||||| |||||| ||||||||||||    
T  53402614 gtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttcc-ttctattctaattcaataagtgattt 53402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 4817937 - 4817889
Alignment:
Q  437 caaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  4817937 caaattgtttttctttt-tatcctaattgaataggtgatttcacatattt 4817889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 24483824 - 24483737
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||| | ||||||||||||  | ||||||| | |   ||||||||||| || ||||| |||||||||||||||||||||||||||    
T  24483824 ggtgatttggagtcaattttgacacacaaatcacccatctgaattgtttttcatt-ctatcataattgaataagtgatttcacatattt 24483737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 54706776 - 54706727
Alignment:
Q  437 caaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||   ||| |||| |||||||||||||||||||||    
T  54706776 caaattgtttttccttttattcccaattcaataagtgatttcacatattt 54706727  T

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Target: chr1 (Bit Score: 66; Significance: 6e-29; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 424434 - 424342
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| |||||||||||||||||||||||||||||||||||    
T  424434 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcc-ttctatcctaattgaataagtgatttcacatattt 424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 7995703 - 7995611
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| |||||||||  || | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  7995703 agaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattgtttttcc-ttctatcctaattgaataagtgatttcacatattt 7995611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 32784088 - 32784178
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcc-ttctatccttattgaataagtgatttcacatattt 32784178  T

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Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 3232770 - 3232858
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||| ||||||||||| ||| | |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  3232770 gggtgatttagggtcaattttgatcaaaaaatcacccctccgaattgtttttcc-ttctatcctaattgaataaatgatttcacatattt 3232858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 33487173 - 33487081
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  33487173 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcc-ttctatcctaattgaatatgtgatttcatatattt 33487081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 28678273 - 28678181
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| | | | |||||||||| | ||||||| |||||||||||||||||||||||||||    
T  28678273 agaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattgttttt-cgttctatcataattgaataagtgatttcacatattt 28678181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 29205267 - 29205355
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||| ||||  |||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  29205267 gggtgatttagggtcaattttgacccaaaaatcaccccttggaattgtttttcc-ttctatcataattgaataagtgatttcatatattt 29205355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 12871599 - 12871691
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | |||||||| | || ||||||||| ||||||||||||||||||||||    
T  12871599 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgttttt-cattatatcctaatcgaataagtgatttcacatattt 12871691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 14265266 - 14265354
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||| |||||||||| ||| | |  ||||||||| ||||||||||||| |||||||||||||||||||||    
T  14265266 gggtgatttagggtcaattttgacaaaaaaatcacccctccgagctgtttttcc-ttctatcctaattaaataagtgatttcacatattt 14265354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 42490871 - 42490961
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatat 484  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||| | |||||||||| | ||||||| |||||||||||||||||||||||||    
T  42490871 agagaggtgatttagggtcaagtttgacctaaaaatcacccctccgaattgttttt-cgttctatcttaattgaataagtgatttcacatat 42490961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 18343592 - 18343684
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||| | |||||||||| ||||| | ||||| ||| |||||||||||||||||    
T  18343592 agaggggtgatttaggatcaattttgacccaaaaatcaccccttcgatttgtttttcc-ttctaccttaattaaatgagtgatttcacatattt 18343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 27534677 - 27534769
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||||||||||||||||||||| ||||||||  ||| | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  27534677 agagggatgatttagggtcaattttgacccaaaaatcatccctccgatttgtttttcc-ttctaccttaattgaataagtgatttcacatattt 27534769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 20411555 - 20411643
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||| ||||||||| | | | |||||||||| |||| ||| | ||||||||||||||||||||||||||    
T  20411555 gggtgatttatggtcaattttgacccaaaaatcacccatccgaattgttttt-ctttttattcaaattgaataagtgatttcacatattt 20411643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 45193769 - 45193677
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| ||||||||||||||||| ||| || ||| || ||| | | |||||||| | |||||||||||||||||||||||||||||||||||    
T  45193769 agaggggcgatttagggtcaattttaacccaataat-acccctccgagttgttttttccttctatcctaattgaataagtgatttcacatattt 45193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 4882494 - 4882410
Alignment:
Q  401 gatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| |||||||| |||| ||||||||| ||| | | ||||||||| ||  ||||||||||||||||||||||||||||||||    
T  4882494 gatttagagtcaatttcgacccaaaaatcacccctccgatttgtttttcatta-tatcctaattgaataagtgatttcacatattt 4882410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 486
Target Start/End: Complemental strand, 37822471 - 37822396
Alignment:
Q  410 tcaattttgaccaaaaaatcacgccttca-aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||| || |||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  37822471 tcaattttgacccaaaaattac-ccttctgaattgtttttcctt-ctatcctaattgaataagtgatttcacatattt 37822396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 45750456 - 45750548
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||  |  ||  ||||||||| | || |||||||||||||||||| |||||||||||||    
T  45750456 agaggggtgatttaaggtcaattttgacccaaaaatcat-caatccgattgttttttccttttatcctaattgaataagttatttcacatattt 45750548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 4871165 - 4871077
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| | |||||||||||  | |||||||  || | ||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  4871165 gggtgatttaagatcaattttgactcataaatcaccactccgaattgtttttccttt-tattctaattgaataagttatttcacatattt 4871077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 13488675 - 13488587
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||| ||||||||| | | | | |||||||||| ||| | | |||||||||||||||||| ||||||||    
T  13488675 gggtgatttagggtcgattttgacccaaaaatcacccatccgatttgtttttcc-ttccaccttaattgaataagtgattttacatattt 13488587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 42276335 - 42276426
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||| | ||||||| | |||||||| ||| | |||||||||| ||| ||||| ||||| ||||| |||||||||||||||    
T  42276335 agaggggtgatttagggttatttttgac-acaaaatcacccctccgaattgttttttctt-ctatcataattaaataactgatttcacatattt 42276426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 33939145 - 33939089
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttc 449  Q
    ||||||||||||||||||||||||||||| ||||||||| |||   |||||||||||    
T  33939145 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttc 33939089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 439 - 486
Target Start/End: Original strand, 44517171 - 44517217
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  44517171 aattgtttttcctt-ctatcctaattcaataagtgatttcacatattt 44517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 478
Target Start/End: Complemental strand, 33125943 - 33125865
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttc 478  Q
    ||||||||||||||||||||||||  |||||||| | |  ||||||||||||| |||| |  |||||||||||||||||||    
T  33125943 ggtgatttagggtcaattttgacc-caaaatcactcatctaaattgtttttcc-ttcttttataattgaataagtgatttc 33125865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 482
Target Start/End: Original strand, 17347584 - 17347664
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    |||||||||||||||||||||| ||||||||| | | | | |||||||| | ||||||| |||  ||||||||||||||||||    
T  17347584 tgatttagggtcaattttgacc-aaaaatcacccatccgagttgttttttc-ttctatcataaaggaataagtgatttcacat 17347664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 10627029 - 10627070
Alignment:
Q  445 ttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||| |||||||||||||||||| |||||||||||||    
T  10627029 tttttctttatatcctaattgaataagtaatttcacatattt 10627070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 486
Target Start/End: Original strand, 51418040 - 51418083
Alignment:
Q  441 ttgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  51418040 ttgtttttcctt-ctatcctaattgaa-aagtgatttcacatattt 51418083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 426
Target Start/End: Original strand, 13869627 - 13869655
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaa 426  Q
    |||||||||||||||||||||||||||||    
T  13869627 ggtgatttagggtcaattttgaccaaaaa 13869655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 29726690 - 29726647
Alignment:
Q  442 tgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||    
T  29726690 tgtttttcctta-tatcctaatcgaataagtgatttcacatattt 29726647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 1229 - 1137
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1229 agaggggtgatttaaggtcaattttgacccaaaaatcacccctgcgaattgtttttcc-ttctaccctaattgaataagtgatttcacatattt 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 441 - 486
Target Start/End: Original strand, 1 - 45
Alignment:
Q  441 ttgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  1 ttgtttttcctt-ctatcttaattgaataagtgatttcacatattt 45  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 37612631 - 37612723
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | |||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  37612631 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattttttttcc-ttctatcctagttgaataagtgatttcacatattt 37612723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 2025360 - 2025272
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    |||||||||||||| |||||||||||||||||||||||| | | ||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  2025360 agaggggtgatttatggtcaattttgaccaaaaaatcacccttccaagttgtttttccttt-tattctaattgaataagtgatttcacat 2025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 10147924 - 10148017
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| || |||||| ||| | | ||||||||   |||||||||||||||||||||||||||||||||||    
T  10147924 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttcttctatcctaattgaataagtgatttcacatattt 10148017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 10338969 - 10338881
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||  ||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccctccgaattgtttttccttt-tatcctaattgaataagtgatttcacatattt 10338881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 11161860 - 11161948
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||||||||||| |||||||||    
T  11161860 agaggggtaatttagggtcaattttgacccaaaaatcaccccttcaagttgttttt-ctttatatcctaattgaataagtcatttcacat 11161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 39067840 - 39067748
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| |||||||||   | |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  39067840 agaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattgtttttcc-ttctatcctaatttaataagtgatttcacatattt 39067748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 2234617 - 2234529
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| |||||| |||||||| | ||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  2234617 gggtgatctagggttaattttgatccaaaaatcaccccttcgaattgtttttcc-ttctatcctagttgaataagtgatttcacatattt 2234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 12329608 - 12329696
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||| ||||||||||| | |||||||||   ||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12329608 gggtgatttagagtcaattttgatccaaaaatcaccatttcgaattgtttttccttt-tatcctaattgaataagtgatttcacatattt 12329696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 9501572 - 9501660
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||| | ||||||||| | |   |||||||||| | |||||||||||||||||||||||||||||||||||    
T  9501572 ggtgatttagggtcaattttgatccaaaaatcacccatctgaattgttttttccttctatcctaattgaataagtgatttcacatattt 9501660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 41361712 - 41361802
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||||||||||| ||||||||| ||| | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccctccgatttgtttttcc-ttctaccgtaattgaataagtgatttcacatattt 41361802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 1810370 - 1810283
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | || ||||||  ||||||||||||| |||||||||||||||||    
T  1810370 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttttttttc--ttctatcctaattcaataagtgatttcacat 1810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 30027031 - 30026939
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||| |||||||| ||||||||| | | | | |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  30027031 agaggggtgatttagggtcatttttgacccaaaaatcacccatccgagttgttttttctt-ctatcataattgaataagtgatttcacatattt 30026939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 31202440 - 31202528
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||| ||||||||  | | ||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  31202440 gggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttc-tttctattataattgaataagtgatttcacatattt 31202528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 31407899 - 31407807
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||   || | |||||||||||| ||||||| || |||||||| |||||||||||||||    
T  31407899 agaggggtgatttagggtcaattttgacccaaaaatcatctctccgaattgtttttcc-ttctatcatagttgaataaatgatttcacatattt 31407807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 13570877 - 13570785
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||||| | ||||||||  | | | ||||||||||| || ||||||||||| |||||||||||||||||||||    
T  13570877 agaggggtgatttagagtcaattttgatctaaaaatcattcatcccaattgtttttcatt-ctatcctaattaaataagtgatttcacatattt 13570785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 14600849 - 14600757
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||||||||||||||||||||||| ||||||||  | | | | |||||||| ||| ||||||||||||||||| |||||||||||||||    
T  14600849 agagaggtgatttagggtcaattttgacccaaaaatcatccatccgagttgttttttctt-ctatcctaattgaataactgatttcacatattt 14600757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 23971245 - 23971153
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||||||||  || |||||||||||||||||||| | | | | |||||||||||| |||| ||||||||||||||||||||||||||||    
T  23971245 agagaggtgatttaaagtaaattttgaccaaaaaatcactcatccgagttgtttttcctt-ctattctaattgaataagtgatttcacatattt 23971153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 24791319 - 24791227
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||  | | | |||||||||||| || |||||||||| |||||||||||| ||||||||    
T  24791319 agaggggtgatttatggtcaattttgacccaaaaatcatccatccgaattgtttttcc-ttatatcctaattcaataagtgatttaacatattt 24791227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 31308120 - 31308218
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcac------gccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||| | |||||||||      | || | | |||||||||||| |||||||||||||||||||||||||||||||||    
T  31308120 agaggggtgatttaaggtcaattttgatctaaaaatcacctctccgactccgagttgtttttcctt-ctatcctaattgaataagtgatttcacatattt 31308218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 1040037 - 1039952
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| |||||||||||| | ||||||||| | | | ||||| |||||||| |||| |||||| |||||||||||||||||||||    
T  1040037 tgatttaaggtcaattttgatccaaaaatcacccatccgaattggttttcctt-ctattctaattcaataagtgatttcacatattt 1039952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 24699812 - 24699902
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcct-ttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||| ||||||||| | | | |  |||||||  | || |||||||||| |||||||||||||||||||||    
T  24699812 gggtgatttagggtcaattttgacccaaaaatcacccatccgagatgttttttttcttatatcctaattaaataagtgatttcacatattt 24699902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 439 - 486
Target Start/End: Complemental strand, 37128591 - 37128545
Alignment:
Q  439 aattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  37128591 aattgtttttcctt-ctatcctagttgaataagtgatttcacatattt 37128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 3204899 - 3204815
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||| ||||||||||||| |||||| || ||| | |||||||||||| | |||| |||||| ||| |||||||||||||||||    
T  3204899 tgatttagagtcaattttgacccaaaaattac-cctccgaattgtttttccat-ctattctaatttaatgagtgatttcacatattt 3204815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 486
Target Start/End: Original strand, 10334159 - 10334244
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||| | ||||||||| | |   | |||||||||| ||||||||||||| ||||||||| |||| ||||||    
T  10334159 tgatttagggtcaattttgatccaaaaatcactcatatgagttgtttttcc-ttctatcctaattaaataagtgagttcatatattt 10334244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 7583915 - 7583855
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttccttt 453  Q
    |||||||||||||||| |||||||||||| ||||||||| | | | | |||||||||||||    
T  7583915 agaggggtgatttaggatcaattttgacccaaaaatcacccatccgagttgtttttccttt 7583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 15288919 - 15288857
Alignment:
Q  423 aaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| |||| |||||||||| |||||    
T  15288919 aaaaatcatcccttcgaattgtttttc-tttctatcctaattaaatacgtgatttcacttattt 15288857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 15469288 - 15469226
Alignment:
Q  423 aaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||  ||||| ||||||||||| |||||||||||||| |||| |||||||||| |||||    
T  15469288 aaaaatcatcccttcgaattgtttttc-tttctatcctaattaaatacgtgatttcacttattt 15469226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Original strand, 22787525 - 22787562
Alignment:
Q  449 cctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  22787525 cctttctatcctagttgaataagtgatttaacatattt 22787562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 30039476 - 30039390
Alignment:
Q  399 gtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgattt-cacatattt 486  Q
    |||||||| ||||||||||||||  |||||||| | | | |||||||||||| |||| | ||||||||||| ||||||| |||||||||    
T  30039476 gtgatttatggtcaattttgacc-caaaatcactcatccgaattgtttttcc-ttcttttctaattgaatatgtgatttccacatattt 30039390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 17331306 - 17331398
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||| ||||||| |||||||||||||||||||||||||||    
T  17331306 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttcc-ttctatcttaattgaataagtgatttcacatattt 17331398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 28040607 - 28040699
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| ||| ||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  28040607 agaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcgtttttcc-ttatatcctaattgaataagtgatttcacatattt 28040699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 32347858 - 32347765
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||| | | |||||||| | |||||||||||||||||||||||||||||||||||    
T  32347858 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgacttgttttttccttctatcctaattgaataagtgatttcacatattt 32347765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 399 - 482
Target Start/End: Original strand, 17699537 - 17699619
Alignment:
Q  399 gtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacat 482  Q
    ||||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||    
T  17699537 gtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcc-ttctatcctaattgaataagtgatttcacat 17699619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 43493850 - 43493942
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| | |||||||||  || | |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  43493850 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattgtttttcc-ttctattctaattgaataagtgatttcacatattt 43493942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 42609127 - 42609214
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||| ||||||||| | | | |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  42609127 ggtgatttagggtcaattttgacctaaaaatcactcatccgaattgttttttctt-ctatcctaattgaataagtgatttcacatattt 42609214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 394 - 486
Target Start/End: Original strand, 20483165 - 20483256
Alignment:
Q  394 gaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaa-ttgaataagtgatttcacatattt 486  Q
    ||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatcac-cctccaaattgtttttccttt-tattctaatttgaataagtgatttcacatattt 20483256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 27241046 - 27241134
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| | |||||||||||| ||||||||| |||   ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27241046 gggtgatttatgatcaattttgacccaaaaatcacccctctgaattgtttttccttt-tatcctaattgaataagtgatttcacatattt 27241134  T

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Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 33164611 - 33164519
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||  ||||||||| ||| | |||||||||||| ||||| | |||||||||||||||||||||||||||    
T  33164611 agaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattgtttttcc-ttctaccttaattgaataagtgatttcacatattt 33164519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 17096385 - 17096290
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcct--ttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| || |||||| ||| | | ||||||||  |  |||||||||||||||||||||||||||||||||||    
T  17096385 agaggggtgatttagggtcaattttgacccaataatcacccctcccagttgttttttttccttctatcctaattgaataagtgatttcacatattt 17096290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 29097769 - 29097859
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||| ||| ||||| ||| | | |||||||||| ||||| | |||||||||||||||||||||||||||    
T  29097769 aggggtgatttagggtcaattttgacccaaagatcacccctccgatttgtttttcc-ttctaccttaattgaataagtgatttcacatattt 29097859  T

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Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 400 - 486
Target Start/End: Original strand, 34431045 - 34431130
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||| ||||||||| | ||| |||||||||| | ||||||  |||||||||||||||||||||||||||    
T  34431045 tgatttagggtcaattttgacccaaaaatcacccattcgaattgttttttc-ttctattttaattgaataagtgatttcacatattt 34431130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 6281022 - 6281114
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||| |||||||||||||| ||||||||| |||   |||| ||||||| |||||| ||||||||||||||||||| ||||||||    
T  6281022 agaggggtgatttatggtcaattttgacccaaaaatcacccctctgaattatttttcc-ttctattctaattgaataagtgattttacatattt 6281114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 23882259 - 23882167
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||||||||   ||||||||    | ||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  23882259 agaggggtgatttagggtcaattttgattcaaaaatcatcaatccaaattgtttttc-tttctatccaaattgaataagtgatttgacatattt 23882167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 26295201 - 26295109
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||| |||||||||||||||||||||| | ||||||||| ||| | || ||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  26295201 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaagtgtttttcc-ttctatccttattgaataagtgatttaacaaattt 26295109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 7771949 - 7771890
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctt 452  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||    
T  7771949 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctt 7771890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 6635227 - 6635320
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaa-ttgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||| |||||||||| ||||||||||| ||||||||| |  ||  | |||||||||||| ||||| |||||||||||||||||||||||||||    
T  6635227 agagggatgatttagggccaattttgacccaaaaatcaccctctctgagttgtttttcctt-ctatcataattgaataagtgatttcacatattt 6635320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 6682013 - 6681925
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||| ||||| |||| || ||||||||| | ||| | ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  6682013 gggtgatttagagtcaaatttggcccaaaaatcactcattcgagttgtttttccttt-tatctgaattgaataagtgatttcacatattt 6681925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 178244 - 178157
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||| |||||||||||||  |||||||||  || | | |||| |||||||  ||||||||||||||||||||||||||||||||    
T  178244 ggtgatttaaggtcaattttgactcaaaaatcacctctccgagttgtgtttcctta-tatcctaattgaataagtgatttcacatattt 178157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 12439771 - 12439685
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||  |||||||||| ||||||||| ||| | ||||||||||| || |||||||| ||||||||||||||||| ||||||    
T  12439771 ggtgatttagggataattttgacctaaaaatcac-cctccgaattgtttttcatt-ctatcctagttgaataagtgatttcatatattt 12439685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 3740336 - 3740427
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||| |||||||||||| |||||||||  ||||||||  | |   ||||||||| |  |||||||||||||||||||||||||||||||||||    
T  3740336 agaggtgtgatttagggttaattttgactcaaaaatcatccatctgaattgttttcc--ttctatcctaattgaataagtgatttcacatattt 3740427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 981164 - 981076
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| |||||||||||| || |||| | ||| | | |||||||||| ||||||| ||||||||  |||||||||||||||||    
T  981164 gggtgatttaggatcaattttgacccaataatcgcccctccgagttgtttttcc-ttctatcataattgaacgagtgatttcacatattt 981076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 39531540 - 39531454
Alignment:
Q  397 gggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||| |||||||||||||| |||| |||  ||| | | ||||||| |  ||||||| |||||||||||||||||||||||||||    
T  39531540 gggtgatttaaggtcaattttgacccaaaa-tcatccctccgagttgttttcc--ttctatcgtaattgaataagtgatttcacatattt 39531454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 12891706 - 12891746
Alignment:
Q  445 ttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  12891706 ttttccttt-tatcctaattgaataagtgatttcacatattt 12891746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 486
Target Start/End: Complemental strand, 39179939 - 39179879
Alignment:
Q  425 aaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| ||| | |||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  39179939 aaatcacccctccgaattatttttcctt-ctattctaattgaataagtgatttcacatattt 39179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 42396641 - 42396563
Alignment:
Q  407 gggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||| ||||||||    ||| |||| ||||| ||| ||||| |||||||||||| ||||||||||||||    
T  42396641 gggtcaattttgacccaaaaatcatcttttcgaattattttttctt-ctatcttaattgaataagcgatttcacatattt 42396563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 486
Target Start/End: Original strand, 17687231 - 17687275
Alignment:
Q  441 ttgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||    
T  17687231 ttgtttttcctt-ctatcttaattgaataagttatttcacatattt 17687275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 6887304 - 6887244
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttccttt 453  Q
    ||||||||||||||||||||||||| | |  |||||||| |||  || |||||||||||||    
T  6887304 agaggggtgatttagggtcaatttttaacccaaaatcacccctctaacttgtttttccttt 6887244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 2878 - 2972
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttc-ctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||||||||||||||||||||||||| || |||||| ||| | | ||||||||  | |||||||||||||||||||||||||||||||||||    
T  2878 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttccttctatcctaattgaataagtgatttcacatattt 2972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 484
Target Start/End: Original strand, 35065 - 35150
Alignment:
Q  398 ggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatat 484  Q
    |||||||||||||||||||||||| ||||||||| | | | | |||||||||||| |||||||||||||||||||||||||||||||    
T  35065 ggtgatttagggtcaattttgacccaaaaatcacccatccgagttgtttttcctt-ctatcctaattgaataagtgatttcacatat 35150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 74142 - 74234
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||| |||||||||  |||||||||||| ||||||||| | | | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  74142 agaggagtgatttagaatcaattttgacccaaaaatcacccatccgaattgtttttcctt-ctatcctaattgaataagtgatttcacatattt 74234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 7255 - 7175
Alignment:
Q  405 tagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| | ||||||| ||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7255 tagggtccaatttgacccaaaaatcacccctccgaattgtttttccttt-tatcctaattgaataagtgatttcacatattt 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 404401 - 404309
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    ||||||| |||||| |||||||||||| | ||||||||| | | | ||| ||||||| || |||||||||||||||||||||||||||||||||    
T  404401 agaggggcgatttaaggtcaattttgatccaaaaatcacccatccgaatagtttttc-ttgctatcctaattgaataagtgatttcacatattt 404309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 2557 - 2468
Alignment:
Q  395 aggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||| |||||||| ||||||||| |||   | |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  2557 aggggtgatttagggtcatttttgacccaaaaatcac-cctctgagttgtttttcc-ttctatcataatcgaataagtgatttcacatattt 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 13392 - 13300
Alignment:
Q  393 agaggggtgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttct---atcctaattgaataagtgatttcacat 482  Q
    |||| |||||||||||||||||||||| | ||||||||| ||| | ||||||||||  ||| |   |||||||||||||||||||||||||||    
T  13392 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttttttttttttatcctaattgaataagtgatttcacat 13300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 4202 - 4118
Alignment:
Q  400 tgatttagggtcaattttgaccaaaaaatcacgccttcaaattgtttttcctttctatcctaattgaataagtgatttcacatattt 486  Q
    |||||||||||||||||||||  ||||||||| ||||  | |||| ||  | ||||||||||||| |||||||||||||||||||||    
T  4202 tgatttagggtcaattttgacacaaaaatcactcctttgagttgtctt--ccttctatcctaattaaataagtgatttcacatattt 4118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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