View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14582_low_2 (Length: 383)
Name: NF14582_low_2
Description: NF14582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14582_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 19 - 363
Target Start/End: Complemental strand, 13125773 - 13125429
Alignment:
| Q |
19 |
gtgatgcatgttatgttattatgatgatatgattttgtgtgaagttaatttgttagttaagtgcttaaaaagttcattatgtgttttaatgatctgttta |
118 |
Q |
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| T |
13125773 |
gtgatgcatgttatgttattaggatgatatgattttgtgtgaagttaatttgttatttaagtgcttaaaaagttcattatgtgttt-aatgatctgttta |
13125675 |
T |
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| Q |
119 |
tgtgataattatgtttatgtttttgtgtttaactctagttaatttaagacatgcatatgttttttctttatgaatgtgtttatgaaataatcatttatgt |
218 |
Q |
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| T |
13125674 |
tgtgataattatgtttatgtttttgtgtttaactctagttaatttaagacatgcatatgttttttctttatgaatgtgtttatgaaataatcatttatgt |
13125575 |
T |
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| Q |
219 |
ttgctttttaactctagttaatttaaagcatgcatatc-nnnnnnnaatttaattccatggcactatttaatgattccttgttgtttaaattgcttatta |
317 |
Q |
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| T |
13125574 |
ttgctttttaactctagttaatttaaagcatgcatatcttttttttaatttaattccatggcactatttagtgattccttgttgtttaaattgcttatta |
13125475 |
T |
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| Q |
318 |
atggtgtgattttattatttcatgcctttttgatcttgcaaattag |
363 |
Q |
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| T |
13125474 |
atggtgtgattttatgatttcatgcctttttgatcttgcaaattag |
13125429 |
T |
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